chr1	CNV	copy_number_variation_region	61723	61723	.	.	.	ID=gssv8;Name=gssv8;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=61723;inner_start=61723;inner_end=356530;outer_end=356542;inner_rank=16;num_variants=60;variants=nssv3696532,nssv3696533,nssv3696534,nssv3696535,nssv3696536,nssv3696537,nssv3696538,nssv3696539,nssv3696540,nssv3696541,nssv3696542,nssv3696543,nssv3696544,nssv3696545,nssv3696546,nssv3696547,nssv3696548,nssv3696549,nssv3696550,nssv3696551,nssv3696552,nssv3696553,nssv3696554,nssv3696555,nssv3696556,nssv3696557,nssv3696558,nssv3696559,nssv3696560,nssv3696561,nssv3696562,nssv3696563,nssv3696564,nssv3696565,nssv3696566,nssv3696567,nssv3696568,nssv3696569,nssv3696570,nssv3696571,nssv3696572,nssv3696573,nssv3696574,nssv3696575,nssv3696576,nssv3696577,nssv3696578,nssv3696579,nssv3696580,nssv3696581,nssv3696582,nssv3696583,nssv3696584,nssv3696585,nssv3696586,nssv3696587,nssv3696588,nssv3696589,nssv3696590,essv7006299;num_studies=2;studies=Vogler2010,WTCCC2(58C);num_platforms=2;platforms=Affymetrix_6.0,Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=60;samples=sample_nssv3696584,sample_nssv3696585,sample_nssv3696586,sample_nssv3696587,sample_nssv3696580,sample_nssv3696581,sample_nssv3696582,sample_nssv3696583,sample_nssv3696588,sample_nssv3696589,sample_nssv3696539,sample_nssv3696538,sample_nssv3696567,sample_nssv3696533,sample_nssv3696532,sample_nssv3696535,sample_nssv3696534,sample_nssv3696537,sample_nssv3696536,sample_nssv3696575,sample_nssv3696574,sample_nssv3696577,sample_nssv3696576,sample_nssv3696571,sample_nssv3696570,sample_nssv3696559,sample_nssv3696558,sample_nssv3696557,sample_nssv3696556,sample_nssv3696555,sample_nssv3696554,sample_nssv3696553,sample_nssv3696552,sample_nssv3696551,sample_nssv3696550,sample_nssv3696568,sample_nssv3696572,SW_1105,sample_nssv3696590,sample_nssv3696569,sample_nssv3696566,sample_nssv3696573,sample_nssv3696579,sample_nssv3696578,sample_nssv3696548,sample_nssv3696549,sample_nssv3696564,sample_nssv3696565,sample_nssv3696562,sample_nssv3696563,sample_nssv3696560,sample_nssv3696561,sample_nssv3696540,sample_nssv3696541,sample_nssv3696542,sample_nssv3696543,sample_nssv3696544,sample_nssv3696545,sample_nssv3696546,sample_nssv3696547;num_samples_tested=2609;frequency=2.3%;num_unique_samples_tested=2609;nr_frequency=2.29%;PopulationSummary=European 60:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	61723	356530	.	.	.	ID=gssv8;Name=gssv8;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=61723;inner_start=61723;inner_end=356530;outer_end=356542;inner_rank=16;num_variants=60;variants=nssv3696532,nssv3696533,nssv3696534,nssv3696535,nssv3696536,nssv3696537,nssv3696538,nssv3696539,nssv3696540,nssv3696541,nssv3696542,nssv3696543,nssv3696544,nssv3696545,nssv3696546,nssv3696547,nssv3696548,nssv3696549,nssv3696550,nssv3696551,nssv3696552,nssv3696553,nssv3696554,nssv3696555,nssv3696556,nssv3696557,nssv3696558,nssv3696559,nssv3696560,nssv3696561,nssv3696562,nssv3696563,nssv3696564,nssv3696565,nssv3696566,nssv3696567,nssv3696568,nssv3696569,nssv3696570,nssv3696571,nssv3696572,nssv3696573,nssv3696574,nssv3696575,nssv3696576,nssv3696577,nssv3696578,nssv3696579,nssv3696580,nssv3696581,nssv3696582,nssv3696583,nssv3696584,nssv3696585,nssv3696586,nssv3696587,nssv3696588,nssv3696589,nssv3696590,essv7006299;num_studies=2;studies=Vogler2010,WTCCC2(58C);num_platforms=2;platforms=Affymetrix_6.0,Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=60;samples=sample_nssv3696584,sample_nssv3696585,sample_nssv3696586,sample_nssv3696587,sample_nssv3696580,sample_nssv3696581,sample_nssv3696582,sample_nssv3696583,sample_nssv3696588,sample_nssv3696589,sample_nssv3696539,sample_nssv3696538,sample_nssv3696567,sample_nssv3696533,sample_nssv3696532,sample_nssv3696535,sample_nssv3696534,sample_nssv3696537,sample_nssv3696536,sample_nssv3696575,sample_nssv3696574,sample_nssv3696577,sample_nssv3696576,sample_nssv3696571,sample_nssv3696570,sample_nssv3696559,sample_nssv3696558,sample_nssv3696557,sample_nssv3696556,sample_nssv3696555,sample_nssv3696554,sample_nssv3696553,sample_nssv3696552,sample_nssv3696551,sample_nssv3696550,sample_nssv3696568,sample_nssv3696572,SW_1105,sample_nssv3696590,sample_nssv3696569,sample_nssv3696566,sample_nssv3696573,sample_nssv3696579,sample_nssv3696578,sample_nssv3696548,sample_nssv3696549,sample_nssv3696564,sample_nssv3696565,sample_nssv3696562,sample_nssv3696563,sample_nssv3696560,sample_nssv3696561,sample_nssv3696540,sample_nssv3696541,sample_nssv3696542,sample_nssv3696543,sample_nssv3696544,sample_nssv3696545,sample_nssv3696546,sample_nssv3696547;num_samples_tested=2609;frequency=2.3%;num_unique_samples_tested=2609;nr_frequency=2.29%;PopulationSummary=European 60:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	356542	356542	.	.	.	ID=gssv8;Name=gssv8;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=61723;inner_start=61723;inner_end=356530;outer_end=356542;inner_rank=16;num_variants=60;variants=nssv3696532,nssv3696533,nssv3696534,nssv3696535,nssv3696536,nssv3696537,nssv3696538,nssv3696539,nssv3696540,nssv3696541,nssv3696542,nssv3696543,nssv3696544,nssv3696545,nssv3696546,nssv3696547,nssv3696548,nssv3696549,nssv3696550,nssv3696551,nssv3696552,nssv3696553,nssv3696554,nssv3696555,nssv3696556,nssv3696557,nssv3696558,nssv3696559,nssv3696560,nssv3696561,nssv3696562,nssv3696563,nssv3696564,nssv3696565,nssv3696566,nssv3696567,nssv3696568,nssv3696569,nssv3696570,nssv3696571,nssv3696572,nssv3696573,nssv3696574,nssv3696575,nssv3696576,nssv3696577,nssv3696578,nssv3696579,nssv3696580,nssv3696581,nssv3696582,nssv3696583,nssv3696584,nssv3696585,nssv3696586,nssv3696587,nssv3696588,nssv3696589,nssv3696590,essv7006299;num_studies=2;studies=Vogler2010,WTCCC2(58C);num_platforms=2;platforms=Affymetrix_6.0,Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=60;samples=sample_nssv3696584,sample_nssv3696585,sample_nssv3696586,sample_nssv3696587,sample_nssv3696580,sample_nssv3696581,sample_nssv3696582,sample_nssv3696583,sample_nssv3696588,sample_nssv3696589,sample_nssv3696539,sample_nssv3696538,sample_nssv3696567,sample_nssv3696533,sample_nssv3696532,sample_nssv3696535,sample_nssv3696534,sample_nssv3696537,sample_nssv3696536,sample_nssv3696575,sample_nssv3696574,sample_nssv3696577,sample_nssv3696576,sample_nssv3696571,sample_nssv3696570,sample_nssv3696559,sample_nssv3696558,sample_nssv3696557,sample_nssv3696556,sample_nssv3696555,sample_nssv3696554,sample_nssv3696553,sample_nssv3696552,sample_nssv3696551,sample_nssv3696550,sample_nssv3696568,sample_nssv3696572,SW_1105,sample_nssv3696590,sample_nssv3696569,sample_nssv3696566,sample_nssv3696573,sample_nssv3696579,sample_nssv3696578,sample_nssv3696548,sample_nssv3696549,sample_nssv3696564,sample_nssv3696565,sample_nssv3696562,sample_nssv3696563,sample_nssv3696560,sample_nssv3696561,sample_nssv3696540,sample_nssv3696541,sample_nssv3696542,sample_nssv3696543,sample_nssv3696544,sample_nssv3696545,sample_nssv3696546,sample_nssv3696547;num_samples_tested=2609;frequency=2.3%;num_unique_samples_tested=2609;nr_frequency=2.29%;PopulationSummary=European 60:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	521413	521413	.	.	.	ID=gssv10;Name=gssv10;variant_type=CNV;variant_sub_type=Gain;outer_start=521413;inner_start=521957;inner_end=745298;outer_end=756783;inner_rank=7;num_variants=4;variants=nssv547897,nssv547898,nssv547899,essv60486;num_studies=2;studies=Conrad2009,Alkan2009;num_platforms=2;platforms=NimbleGen42M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=4;samples=YH,JDW,NA18523,NA18507;num_samples_tested=43;frequency=9.3%;num_unique_samples_tested=43;nr_frequency=9.3%;PopulationSummary=European 1:Asian 1:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	521957	745298	.	.	.	ID=gssv10;Name=gssv10;variant_type=CNV;variant_sub_type=Gain;outer_start=521413;inner_start=521957;inner_end=745298;outer_end=756783;inner_rank=7;num_variants=4;variants=nssv547897,nssv547898,nssv547899,essv60486;num_studies=2;studies=Conrad2009,Alkan2009;num_platforms=2;platforms=NimbleGen42M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=4;samples=YH,JDW,NA18523,NA18507;num_samples_tested=43;frequency=9.3%;num_unique_samples_tested=43;nr_frequency=9.3%;PopulationSummary=European 1:Asian 1:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	756783	756783	.	.	.	ID=gssv10;Name=gssv10;variant_type=CNV;variant_sub_type=Gain;outer_start=521413;inner_start=521957;inner_end=745298;outer_end=756783;inner_rank=7;num_variants=4;variants=nssv547897,nssv547898,nssv547899,essv60486;num_studies=2;studies=Conrad2009,Alkan2009;num_platforms=2;platforms=NimbleGen42M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=4;samples=YH,JDW,NA18523,NA18507;num_samples_tested=43;frequency=9.3%;num_unique_samples_tested=43;nr_frequency=9.3%;PopulationSummary=European 1:Asian 1:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	834801	834801	.	.	.	ID=gssv12;Name=gssv12;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=834801;inner_start=834801;inner_end=1029900;outer_end=1041700;inner_rank=8;num_variants=3;variants=nssv2997148,essv7008521,nssv707675;num_studies=3;studies=Vogler2010,Cooper2011,Dogan2014;num_platforms=3;platforms=Affymetrix6.0,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=PennCNV+Birdseye,ReadDepth,Custom_HMM;num_samples=3;samples=sample_nssv707675,BILGI_BIOE,SW_1358;num_samples_tested=2610;frequency=0.11%;num_unique_samples_tested=2610;nr_frequency=0.11%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	834801	1029900	.	.	.	ID=gssv12;Name=gssv12;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=834801;inner_start=834801;inner_end=1029900;outer_end=1041700;inner_rank=8;num_variants=3;variants=nssv2997148,essv7008521,nssv707675;num_studies=3;studies=Vogler2010,Cooper2011,Dogan2014;num_platforms=3;platforms=Affymetrix6.0,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=PennCNV+Birdseye,ReadDepth,Custom_HMM;num_samples=3;samples=sample_nssv707675,BILGI_BIOE,SW_1358;num_samples_tested=2610;frequency=0.11%;num_unique_samples_tested=2610;nr_frequency=0.11%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1041700	1041700	.	.	.	ID=gssv12;Name=gssv12;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=834801;inner_start=834801;inner_end=1029900;outer_end=1041700;inner_rank=8;num_variants=3;variants=nssv2997148,essv7008521,nssv707675;num_studies=3;studies=Vogler2010,Cooper2011,Dogan2014;num_platforms=3;platforms=Affymetrix6.0,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=PennCNV+Birdseye,ReadDepth,Custom_HMM;num_samples=3;samples=sample_nssv707675,BILGI_BIOE,SW_1358;num_samples_tested=2610;frequency=0.11%;num_unique_samples_tested=2610;nr_frequency=0.11%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	668630	668630	.	.	.	ID=gssv13;Name=gssv13;variant_type=CNV;variant_sub_type=Gain;outer_start=668630;inner_start=668630;inner_end=850204;outer_end=851378;inner_rank=8;num_variants=62;variants=essv9838977,essv9838978,essv9838979,essv9838980,essv9838981,essv9838982,essv9838983,essv9838984,essv9838985,essv9838986,essv9838987,essv9838988,essv9838989,essv9838990,essv9838991,essv9838992,essv9838993,essv9838994,essv9838995,essv9838996,essv9838997,essv9838998,essv9838999,essv9839000,essv9839001,essv9839002,essv9839003,essv9839004,essv9839005,essv9839006,essv9839007,essv9839008,essv9839009,essv9839010,essv9839011,essv9839012,essv9839013,essv9839014,essv9839015,essv9839016,essv9839017,essv9839018,essv9839019,essv9839020,essv9839021,essv9839022,essv9839023,essv9839024,essv9839025,essv9839026,essv9839027,essv9839028,essv9839029,essv9839030,essv9839031,essv9839032,essv9839033,essv9839034,essv9839035,essv9839036,nssv18108,essv7004879;num_studies=3;studies=Perry2008,Vogler2010,1000GenomesPhase3;num_platforms=3;platforms=Affymetrix6.0,AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,RD+PEM,ADM2;num_samples=61;samples=HG02383,NA18564,HG02028,NA18567,HG02384,HG01868,NA18553,HG02512,HG00867,NA18947,HG02353,HG00620,HG01840,HG01867,HG00663,HG02181,NA18571,HG00446,HG02401,HG01798,HG02086,HG00766,NA18639,HG00543,NA18635,RW_0585,HG00463,NA19083,HG02116,HG01857,HG02392,NA19025,HG02017,NA18572,NA18557,HG02398,HG00513,NA18535,HG04141,NA18951,HG00675,NA18990,NA18573,HG01871,HG00879,HG00457,HG00306,NA19006,NA18972,HG00614,HG02373,HG00593,HG01028,HG00692,HG00690,NA19072,NA20359,NA18620,NA19079,HG00475,HG00557;num_samples_tested=3643;frequency=1.67%;num_unique_samples_tested=3623;nr_frequency=1.68%;PopulationSummary=European 1:Asian 57:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	668630	850204	.	.	.	ID=gssv13;Name=gssv13;variant_type=CNV;variant_sub_type=Gain;outer_start=668630;inner_start=668630;inner_end=850204;outer_end=851378;inner_rank=8;num_variants=62;variants=essv9838977,essv9838978,essv9838979,essv9838980,essv9838981,essv9838982,essv9838983,essv9838984,essv9838985,essv9838986,essv9838987,essv9838988,essv9838989,essv9838990,essv9838991,essv9838992,essv9838993,essv9838994,essv9838995,essv9838996,essv9838997,essv9838998,essv9838999,essv9839000,essv9839001,essv9839002,essv9839003,essv9839004,essv9839005,essv9839006,essv9839007,essv9839008,essv9839009,essv9839010,essv9839011,essv9839012,essv9839013,essv9839014,essv9839015,essv9839016,essv9839017,essv9839018,essv9839019,essv9839020,essv9839021,essv9839022,essv9839023,essv9839024,essv9839025,essv9839026,essv9839027,essv9839028,essv9839029,essv9839030,essv9839031,essv9839032,essv9839033,essv9839034,essv9839035,essv9839036,nssv18108,essv7004879;num_studies=3;studies=Perry2008,Vogler2010,1000GenomesPhase3;num_platforms=3;platforms=Affymetrix6.0,AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,RD+PEM,ADM2;num_samples=61;samples=HG02383,NA18564,HG02028,NA18567,HG02384,HG01868,NA18553,HG02512,HG00867,NA18947,HG02353,HG00620,HG01840,HG01867,HG00663,HG02181,NA18571,HG00446,HG02401,HG01798,HG02086,HG00766,NA18639,HG00543,NA18635,RW_0585,HG00463,NA19083,HG02116,HG01857,HG02392,NA19025,HG02017,NA18572,NA18557,HG02398,HG00513,NA18535,HG04141,NA18951,HG00675,NA18990,NA18573,HG01871,HG00879,HG00457,HG00306,NA19006,NA18972,HG00614,HG02373,HG00593,HG01028,HG00692,HG00690,NA19072,NA20359,NA18620,NA19079,HG00475,HG00557;num_samples_tested=3643;frequency=1.67%;num_unique_samples_tested=3623;nr_frequency=1.68%;PopulationSummary=European 1:Asian 57:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	851378	851378	.	.	.	ID=gssv13;Name=gssv13;variant_type=CNV;variant_sub_type=Gain;outer_start=668630;inner_start=668630;inner_end=850204;outer_end=851378;inner_rank=8;num_variants=62;variants=essv9838977,essv9838978,essv9838979,essv9838980,essv9838981,essv9838982,essv9838983,essv9838984,essv9838985,essv9838986,essv9838987,essv9838988,essv9838989,essv9838990,essv9838991,essv9838992,essv9838993,essv9838994,essv9838995,essv9838996,essv9838997,essv9838998,essv9838999,essv9839000,essv9839001,essv9839002,essv9839003,essv9839004,essv9839005,essv9839006,essv9839007,essv9839008,essv9839009,essv9839010,essv9839011,essv9839012,essv9839013,essv9839014,essv9839015,essv9839016,essv9839017,essv9839018,essv9839019,essv9839020,essv9839021,essv9839022,essv9839023,essv9839024,essv9839025,essv9839026,essv9839027,essv9839028,essv9839029,essv9839030,essv9839031,essv9839032,essv9839033,essv9839034,essv9839035,essv9839036,nssv18108,essv7004879;num_studies=3;studies=Perry2008,Vogler2010,1000GenomesPhase3;num_platforms=3;platforms=Affymetrix6.0,AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,RD+PEM,ADM2;num_samples=61;samples=HG02383,NA18564,HG02028,NA18567,HG02384,HG01868,NA18553,HG02512,HG00867,NA18947,HG02353,HG00620,HG01840,HG01867,HG00663,HG02181,NA18571,HG00446,HG02401,HG01798,HG02086,HG00766,NA18639,HG00543,NA18635,RW_0585,HG00463,NA19083,HG02116,HG01857,HG02392,NA19025,HG02017,NA18572,NA18557,HG02398,HG00513,NA18535,HG04141,NA18951,HG00675,NA18990,NA18573,HG01871,HG00879,HG00457,HG00306,NA19006,NA18972,HG00614,HG02373,HG00593,HG01028,HG00692,HG00690,NA19072,NA20359,NA18620,NA19079,HG00475,HG00557;num_samples_tested=3643;frequency=1.67%;num_unique_samples_tested=3623;nr_frequency=1.68%;PopulationSummary=European 1:Asian 57:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1500941	1500941	.	.	.	ID=gssv16;Name=gssv16;variant_type=CNV;variant_sub_type=Loss;outer_start=1500941;inner_start=1502835;inner_end=1672597;outer_end=1672603;inner_rank=16;num_variants=2;variants=essv7009632,nssv3696756;num_studies=2;studies=Vogler2010,WTCCC2(58C);num_platforms=2;platforms=Affymetrix6.0,Affymetrix_6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=2;samples=SW_1485,sample_nssv3696756;num_samples_tested=2609;frequency=0.08%;num_unique_samples_tested=2609;nr_frequency=0.07%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1502835	1672597	.	.	.	ID=gssv16;Name=gssv16;variant_type=CNV;variant_sub_type=Loss;outer_start=1500941;inner_start=1502835;inner_end=1672597;outer_end=1672603;inner_rank=16;num_variants=2;variants=essv7009632,nssv3696756;num_studies=2;studies=Vogler2010,WTCCC2(58C);num_platforms=2;platforms=Affymetrix6.0,Affymetrix_6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=2;samples=SW_1485,sample_nssv3696756;num_samples_tested=2609;frequency=0.08%;num_unique_samples_tested=2609;nr_frequency=0.07%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1672603	1672603	.	.	.	ID=gssv16;Name=gssv16;variant_type=CNV;variant_sub_type=Loss;outer_start=1500941;inner_start=1502835;inner_end=1672597;outer_end=1672603;inner_rank=16;num_variants=2;variants=essv7009632,nssv3696756;num_studies=2;studies=Vogler2010,WTCCC2(58C);num_platforms=2;platforms=Affymetrix6.0,Affymetrix_6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=2;samples=SW_1485,sample_nssv3696756;num_samples_tested=2609;frequency=0.08%;num_unique_samples_tested=2609;nr_frequency=0.07%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	317770	317770	.	.	.	ID=gssv18;Name=gssv18;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=317770;inner_start=334387;inner_end=471337;outer_end=471337;inner_rank=7;num_variants=9;variants=essv60536,nssv547887,nssv547888,nssv547890,nssv463225,nssv463226,essv40687,nssv463223,nssv18109;num_studies=4;studies=Perry2008,Conrad2009,Alkan2009,Cooper2008;num_platforms=4;platforms=NimbleGen42M,Illumina1M,AgilentCustom_015685+015686+244K,Illumina_GA+454;num_algorithms=4;algorithms=ReadDepth,GADA,ADM2,HMMSeg;num_samples=9;samples=YH,NA18555,NA18572,NA12156,NA18523,NA18507,NA12878,JDW,NA19240;num_samples_tested=82;frequency=10.98%;num_unique_samples_tested=72;nr_frequency=12.5%;PopulationSummary=European 3:Asian 3:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	334387	471337	.	.	.	ID=gssv18;Name=gssv18;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=317770;inner_start=334387;inner_end=471337;outer_end=471337;inner_rank=7;num_variants=9;variants=essv60536,nssv547887,nssv547888,nssv547890,nssv463225,nssv463226,essv40687,nssv463223,nssv18109;num_studies=4;studies=Perry2008,Conrad2009,Alkan2009,Cooper2008;num_platforms=4;platforms=NimbleGen42M,Illumina1M,AgilentCustom_015685+015686+244K,Illumina_GA+454;num_algorithms=4;algorithms=ReadDepth,GADA,ADM2,HMMSeg;num_samples=9;samples=YH,NA18555,NA18572,NA12156,NA18523,NA18507,NA12878,JDW,NA19240;num_samples_tested=82;frequency=10.98%;num_unique_samples_tested=72;nr_frequency=12.5%;PopulationSummary=European 3:Asian 3:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	471337	471337	.	.	.	ID=gssv18;Name=gssv18;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=317770;inner_start=334387;inner_end=471337;outer_end=471337;inner_rank=7;num_variants=9;variants=essv60536,nssv547887,nssv547888,nssv547890,nssv463225,nssv463226,essv40687,nssv463223,nssv18109;num_studies=4;studies=Perry2008,Conrad2009,Alkan2009,Cooper2008;num_platforms=4;platforms=NimbleGen42M,Illumina1M,AgilentCustom_015685+015686+244K,Illumina_GA+454;num_algorithms=4;algorithms=ReadDepth,GADA,ADM2,HMMSeg;num_samples=9;samples=YH,NA18555,NA18572,NA12156,NA18523,NA18507,NA12878,JDW,NA19240;num_samples_tested=82;frequency=10.98%;num_unique_samples_tested=72;nr_frequency=12.5%;PopulationSummary=European 3:Asian 3:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	564477	564477	.	.	.	ID=gssv19;Name=gssv19;variant_type=CNV;variant_sub_type=Gain;outer_start=564477;inner_start=565129;inner_end=708862;outer_end=708862;inner_rank=7;num_variants=3;variants=essv49251,nssv463227,nssv463228;num_studies=2;studies=Conrad2009,Cooper2008;num_platforms=2;platforms=NimbleGen42M,Illumina1M;num_algorithms=2;algorithms=GADA,HMMSeg;num_samples=3;samples=NA12156,NA19240,NA07037;num_samples_tested=49;frequency=6.12%;num_unique_samples_tested=43;nr_frequency=6.97%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	565129	708862	.	.	.	ID=gssv19;Name=gssv19;variant_type=CNV;variant_sub_type=Gain;outer_start=564477;inner_start=565129;inner_end=708862;outer_end=708862;inner_rank=7;num_variants=3;variants=essv49251,nssv463227,nssv463228;num_studies=2;studies=Conrad2009,Cooper2008;num_platforms=2;platforms=NimbleGen42M,Illumina1M;num_algorithms=2;algorithms=GADA,HMMSeg;num_samples=3;samples=NA12156,NA19240,NA07037;num_samples_tested=49;frequency=6.12%;num_unique_samples_tested=43;nr_frequency=6.97%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	708862	708862	.	.	.	ID=gssv19;Name=gssv19;variant_type=CNV;variant_sub_type=Gain;outer_start=564477;inner_start=565129;inner_end=708862;outer_end=708862;inner_rank=7;num_variants=3;variants=essv49251,nssv463227,nssv463228;num_studies=2;studies=Conrad2009,Cooper2008;num_platforms=2;platforms=NimbleGen42M,Illumina1M;num_algorithms=2;algorithms=GADA,HMMSeg;num_samples=3;samples=NA12156,NA19240,NA07037;num_samples_tested=49;frequency=6.12%;num_unique_samples_tested=43;nr_frequency=6.97%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	521413	521413	.	.	.	ID=gssv20;Name=gssv20;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=521413;inner_start=521413;inner_end=639731;outer_end=641599;inner_rank=7;num_variants=4;variants=essv72287,nssv21439,essv40580,nssv18095;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=4;samples=NA12878,NA19225,NA10847,NA18572;num_samples_tested=70;frequency=5.71%;num_unique_samples_tested=67;nr_frequency=5.97%;PopulationSummary=European 2:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	521413	639731	.	.	.	ID=gssv20;Name=gssv20;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=521413;inner_start=521413;inner_end=639731;outer_end=641599;inner_rank=7;num_variants=4;variants=essv72287,nssv21439,essv40580,nssv18095;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=4;samples=NA12878,NA19225,NA10847,NA18572;num_samples_tested=70;frequency=5.71%;num_unique_samples_tested=67;nr_frequency=5.97%;PopulationSummary=European 2:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	641599	641599	.	.	.	ID=gssv20;Name=gssv20;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=521413;inner_start=521413;inner_end=639731;outer_end=641599;inner_rank=7;num_variants=4;variants=essv72287,nssv21439,essv40580,nssv18095;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=4;samples=NA12878,NA19225,NA10847,NA18572;num_samples_tested=70;frequency=5.71%;num_unique_samples_tested=67;nr_frequency=5.97%;PopulationSummary=European 2:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1559466	1559466	.	.	.	ID=gssv21;Name=gssv21;variant_type=CNV;variant_sub_type=Gain;outer_start=1559466;inner_start=1567881;inner_end=1683706;outer_end=1683706;inner_rank=7;num_variants=3;variants=essv66969,essv9783310,nssv1423939;num_studies=3;studies=Uddin2014,Park2010,Conrad2009;num_platforms=3;platforms=CytoScanHD_2.7M,NimbleGen42M,Agilent24M;num_algorithms=3;algorithms=ChAS,GADA,ADM2;num_samples=3;samples=NA18582,401443JK,NA12828;num_samples_tested=943;frequency=0.32%;num_unique_samples_tested=943;nr_frequency=0.31%;PopulationSummary=European 2:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1567881	1683706	.	.	.	ID=gssv21;Name=gssv21;variant_type=CNV;variant_sub_type=Gain;outer_start=1559466;inner_start=1567881;inner_end=1683706;outer_end=1683706;inner_rank=7;num_variants=3;variants=essv66969,essv9783310,nssv1423939;num_studies=3;studies=Uddin2014,Park2010,Conrad2009;num_platforms=3;platforms=CytoScanHD_2.7M,NimbleGen42M,Agilent24M;num_algorithms=3;algorithms=ChAS,GADA,ADM2;num_samples=3;samples=NA18582,401443JK,NA12828;num_samples_tested=943;frequency=0.32%;num_unique_samples_tested=943;nr_frequency=0.31%;PopulationSummary=European 2:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1683706	1683706	.	.	.	ID=gssv21;Name=gssv21;variant_type=CNV;variant_sub_type=Gain;outer_start=1559466;inner_start=1567881;inner_end=1683706;outer_end=1683706;inner_rank=7;num_variants=3;variants=essv66969,essv9783310,nssv1423939;num_studies=3;studies=Uddin2014,Park2010,Conrad2009;num_platforms=3;platforms=CytoScanHD_2.7M,NimbleGen42M,Agilent24M;num_algorithms=3;algorithms=ChAS,GADA,ADM2;num_samples=3;samples=NA18582,401443JK,NA12828;num_samples_tested=943;frequency=0.32%;num_unique_samples_tested=943;nr_frequency=0.31%;PopulationSummary=European 2:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	357657	357657	.	.	.	ID=gssv22;Name=gssv22;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=357657;inner_start=357657;inner_end=471337;outer_end=471337;inner_rank=7;num_variants=2;variants=essv72246,nssv14765;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=2;samples=NA19225,NA10847;num_samples_tested=70;frequency=2.86%;num_unique_samples_tested=67;nr_frequency=2.98%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	357657	471337	.	.	.	ID=gssv22;Name=gssv22;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=357657;inner_start=357657;inner_end=471337;outer_end=471337;inner_rank=7;num_variants=2;variants=essv72246,nssv14765;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=2;samples=NA19225,NA10847;num_samples_tested=70;frequency=2.86%;num_unique_samples_tested=67;nr_frequency=2.98%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	471337	471337	.	.	.	ID=gssv22;Name=gssv22;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=357657;inner_start=357657;inner_end=471337;outer_end=471337;inner_rank=7;num_variants=2;variants=essv72246,nssv14765;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=2;samples=NA19225,NA10847;num_samples_tested=70;frequency=2.86%;num_unique_samples_tested=67;nr_frequency=2.98%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	740857	740857	.	.	.	ID=gssv23;Name=gssv23;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=740857;inner_start=770993;inner_end=852451;outer_end=852664;inner_rank=8;num_variants=67;variants=nssv3696752,nssv1440110,nssv1423928,nssv1431930,nssv1437923,nssv26892,essv9839424,essv9839425,essv9839426,essv9839427,essv9839428,essv9839429,essv9839430,essv9839431,essv9839432,essv9839433,essv9839434,essv9839435,essv9839436,essv9839437,essv9839438,essv9839439,essv9839440,essv9839441,essv9839442,essv9839443,essv9839444,essv9839445,essv9839446,essv9839447,essv9839448,essv9839449,essv9839450,essv9839451,essv9839452,essv9839453,essv9839454,essv9839455,essv9839456,essv9839457,essv9839458,essv9839459,essv9839460,essv9839461,essv9839462,essv9839463,essv9839464,essv9839465,essv9839466,essv9839467,essv9839468,essv9839469,essv9839470,essv9839471,essv9839472,essv9839473,essv9839474,essv9839475,essv9839476,essv9839477,essv9839478,essv9839479,essv9839480,essv9839481,essv9839482,essv9839483,essv9839484;num_studies=4;studies=Park2010,WTCCC2(58C),1000GenomesPhase3,Perry2008;num_platforms=4;platforms=Affymetrix_6.0,Multiple_NGS_Sequencing,AgilentCustom_015685+015686+244K,Agilent24M;num_algorithms=3;algorithms=RD+PEM,Custom_HMM,ADM2;num_samples=62;samples=NA18564,HG02383,HG02028,NA18567,HG02384,HG01868,NA18553,NA18989,HG01444,HG00867,NA18947,HG00620,HG01840,HG01867,HG00663,HG02181,NA19083,NA18571,HG00446,HG02401,HG01798,HG00766,HG00743,NA18639,HG00543,NA18635,HG00463,NA19070,HG02116,HG01857,HG02392,NA19025,HG02017,NA18572,NA18557,HG02398,HG00513,NA18535,HG04141,sample_nssv3696752,NA18951,HG00675,NA18990,HG02512,NA18573,HG01871,HG00879,HG00457,HG02353,NA19006,NA18972,HG00614,HG02373,HG00593,HG01028,HG00692,HG00690,NA20359,NA18620,NA19079,HG00475,HG00557;num_samples_tested=4064;frequency=1.53%;num_unique_samples_tested=4024;nr_frequency=1.54%;PopulationSummary=European 1:Asian 57:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	770993	852451	.	.	.	ID=gssv23;Name=gssv23;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=740857;inner_start=770993;inner_end=852451;outer_end=852664;inner_rank=8;num_variants=67;variants=nssv3696752,nssv1440110,nssv1423928,nssv1431930,nssv1437923,nssv26892,essv9839424,essv9839425,essv9839426,essv9839427,essv9839428,essv9839429,essv9839430,essv9839431,essv9839432,essv9839433,essv9839434,essv9839435,essv9839436,essv9839437,essv9839438,essv9839439,essv9839440,essv9839441,essv9839442,essv9839443,essv9839444,essv9839445,essv9839446,essv9839447,essv9839448,essv9839449,essv9839450,essv9839451,essv9839452,essv9839453,essv9839454,essv9839455,essv9839456,essv9839457,essv9839458,essv9839459,essv9839460,essv9839461,essv9839462,essv9839463,essv9839464,essv9839465,essv9839466,essv9839467,essv9839468,essv9839469,essv9839470,essv9839471,essv9839472,essv9839473,essv9839474,essv9839475,essv9839476,essv9839477,essv9839478,essv9839479,essv9839480,essv9839481,essv9839482,essv9839483,essv9839484;num_studies=4;studies=Park2010,WTCCC2(58C),1000GenomesPhase3,Perry2008;num_platforms=4;platforms=Affymetrix_6.0,Multiple_NGS_Sequencing,AgilentCustom_015685+015686+244K,Agilent24M;num_algorithms=3;algorithms=RD+PEM,Custom_HMM,ADM2;num_samples=62;samples=NA18564,HG02383,HG02028,NA18567,HG02384,HG01868,NA18553,NA18989,HG01444,HG00867,NA18947,HG00620,HG01840,HG01867,HG00663,HG02181,NA19083,NA18571,HG00446,HG02401,HG01798,HG00766,HG00743,NA18639,HG00543,NA18635,HG00463,NA19070,HG02116,HG01857,HG02392,NA19025,HG02017,NA18572,NA18557,HG02398,HG00513,NA18535,HG04141,sample_nssv3696752,NA18951,HG00675,NA18990,HG02512,NA18573,HG01871,HG00879,HG00457,HG02353,NA19006,NA18972,HG00614,HG02373,HG00593,HG01028,HG00692,HG00690,NA20359,NA18620,NA19079,HG00475,HG00557;num_samples_tested=4064;frequency=1.53%;num_unique_samples_tested=4024;nr_frequency=1.54%;PopulationSummary=European 1:Asian 57:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	852664	852664	.	.	.	ID=gssv23;Name=gssv23;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=740857;inner_start=770993;inner_end=852451;outer_end=852664;inner_rank=8;num_variants=67;variants=nssv3696752,nssv1440110,nssv1423928,nssv1431930,nssv1437923,nssv26892,essv9839424,essv9839425,essv9839426,essv9839427,essv9839428,essv9839429,essv9839430,essv9839431,essv9839432,essv9839433,essv9839434,essv9839435,essv9839436,essv9839437,essv9839438,essv9839439,essv9839440,essv9839441,essv9839442,essv9839443,essv9839444,essv9839445,essv9839446,essv9839447,essv9839448,essv9839449,essv9839450,essv9839451,essv9839452,essv9839453,essv9839454,essv9839455,essv9839456,essv9839457,essv9839458,essv9839459,essv9839460,essv9839461,essv9839462,essv9839463,essv9839464,essv9839465,essv9839466,essv9839467,essv9839468,essv9839469,essv9839470,essv9839471,essv9839472,essv9839473,essv9839474,essv9839475,essv9839476,essv9839477,essv9839478,essv9839479,essv9839480,essv9839481,essv9839482,essv9839483,essv9839484;num_studies=4;studies=Park2010,WTCCC2(58C),1000GenomesPhase3,Perry2008;num_platforms=4;platforms=Affymetrix_6.0,Multiple_NGS_Sequencing,AgilentCustom_015685+015686+244K,Agilent24M;num_algorithms=3;algorithms=RD+PEM,Custom_HMM,ADM2;num_samples=62;samples=NA18564,HG02383,HG02028,NA18567,HG02384,HG01868,NA18553,NA18989,HG01444,HG00867,NA18947,HG00620,HG01840,HG01867,HG00663,HG02181,NA19083,NA18571,HG00446,HG02401,HG01798,HG00766,HG00743,NA18639,HG00543,NA18635,HG00463,NA19070,HG02116,HG01857,HG02392,NA19025,HG02017,NA18572,NA18557,HG02398,HG00513,NA18535,HG04141,sample_nssv3696752,NA18951,HG00675,NA18990,HG02512,NA18573,HG01871,HG00879,HG00457,HG02353,NA19006,NA18972,HG00614,HG02373,HG00593,HG01028,HG00692,HG00690,NA20359,NA18620,NA19079,HG00475,HG00557;num_samples_tested=4064;frequency=1.53%;num_unique_samples_tested=4024;nr_frequency=1.54%;PopulationSummary=European 1:Asian 57:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	37889	37889	.	.	.	ID=gssv26;Name=gssv26;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=37889;inner_start=37889;inner_end=116862;outer_end=127330;inner_rank=12;num_variants=5;variants=nssv14762,nssv707615,nssv707618,nssv14788,nssv707619;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=5;samples=sample_nssv707615,NA07029,NA19144,sample_nssv707619,sample_nssv707618;num_samples_tested=1530;frequency=0.33%;num_unique_samples_tested=1530;nr_frequency=0.32%;PopulationSummary=European 4:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	37889	116862	.	.	.	ID=gssv26;Name=gssv26;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=37889;inner_start=37889;inner_end=116862;outer_end=127330;inner_rank=12;num_variants=5;variants=nssv14762,nssv707615,nssv707618,nssv14788,nssv707619;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=5;samples=sample_nssv707615,NA07029,NA19144,sample_nssv707619,sample_nssv707618;num_samples_tested=1530;frequency=0.33%;num_unique_samples_tested=1530;nr_frequency=0.32%;PopulationSummary=European 4:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	127330	127330	.	.	.	ID=gssv26;Name=gssv26;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=37889;inner_start=37889;inner_end=116862;outer_end=127330;inner_rank=12;num_variants=5;variants=nssv14762,nssv707615,nssv707618,nssv14788,nssv707619;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=5;samples=sample_nssv707615,NA07029,NA19144,sample_nssv707619,sample_nssv707618;num_samples_tested=1530;frequency=0.33%;num_unique_samples_tested=1530;nr_frequency=0.32%;PopulationSummary=European 4:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	637238	637238	.	.	.	ID=gssv27;Name=gssv27;variant_type=CNV;variant_sub_type=Gain;outer_start=637238;inner_start=637238;inner_end=724071;outer_end=730328;inner_rank=7;num_variants=11;variants=essv52736,nssv1751289,nssv1751290,nssv1751291,nssv1751292,nssv1751293,nssv1751294,nssv1751295,nssv1751296,nssv1751297,nssv1751298;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,NA12006,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	637238	724071	.	.	.	ID=gssv27;Name=gssv27;variant_type=CNV;variant_sub_type=Gain;outer_start=637238;inner_start=637238;inner_end=724071;outer_end=730328;inner_rank=7;num_variants=11;variants=essv52736,nssv1751289,nssv1751290,nssv1751291,nssv1751292,nssv1751293,nssv1751294,nssv1751295,nssv1751296,nssv1751297,nssv1751298;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,NA12006,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	730328	730328	.	.	.	ID=gssv27;Name=gssv27;variant_type=CNV;variant_sub_type=Gain;outer_start=637238;inner_start=637238;inner_end=724071;outer_end=730328;inner_rank=7;num_variants=11;variants=essv52736,nssv1751289,nssv1751290,nssv1751291,nssv1751292,nssv1751293,nssv1751294,nssv1751295,nssv1751296,nssv1751297,nssv1751298;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,NA12006,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1226063	1226063	.	.	.	ID=gssv29;Name=gssv29;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1226063;inner_start=1226063;inner_end=1309977;outer_end=1309977;inner_rank=14;num_variants=2;variants=nssv708530,nssv3696753;num_studies=2;studies=WTCCC2(58C),Cooper2011;num_platforms=2;platforms=Affymetrix_6.0,Custom_Illumina_1.2M;num_algorithms=1;algorithms=Custom_HMM;num_samples=2;samples=sample_nssv3696753,sample_nssv708530;num_samples_tested=3000;frequency=0.07%;num_unique_samples_tested=3000;nr_frequency=0.06%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1226063	1309977	.	.	.	ID=gssv29;Name=gssv29;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1226063;inner_start=1226063;inner_end=1309977;outer_end=1309977;inner_rank=14;num_variants=2;variants=nssv708530,nssv3696753;num_studies=2;studies=WTCCC2(58C),Cooper2011;num_platforms=2;platforms=Affymetrix_6.0,Custom_Illumina_1.2M;num_algorithms=1;algorithms=Custom_HMM;num_samples=2;samples=sample_nssv3696753,sample_nssv708530;num_samples_tested=3000;frequency=0.07%;num_unique_samples_tested=3000;nr_frequency=0.06%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1309977	1309977	.	.	.	ID=gssv29;Name=gssv29;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1226063;inner_start=1226063;inner_end=1309977;outer_end=1309977;inner_rank=14;num_variants=2;variants=nssv708530,nssv3696753;num_studies=2;studies=WTCCC2(58C),Cooper2011;num_platforms=2;platforms=Affymetrix_6.0,Custom_Illumina_1.2M;num_algorithms=1;algorithms=Custom_HMM;num_samples=2;samples=sample_nssv3696753,sample_nssv708530;num_samples_tested=3000;frequency=0.07%;num_unique_samples_tested=3000;nr_frequency=0.06%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	10001	10001	.	.	.	ID=gssv30;Name=gssv30;variant_type=CNV;variant_sub_type=Gain;outer_start=10001;inner_start=10499;inner_end=86506;outer_end=92392;inner_rank=7;num_variants=32;variants=essv75141,essv63480,essv65410,essv33662,essv36301,essv45662,essv66858,essv83994,essv57788,nssv14768,nssv14790,nssv14784,essv68486,essv42378,essv43633,essv44330,essv55201,essv47291,essv53480,essv59014,nssv14781,essv61349,essv75636,essv78929,essv36569,essv48828,essv82243,essv77852,essv56500,nssv14770,nssv14771,nssv18117;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=32;samples=NA07037,NA12828,NA11894,NA19221,NA19147,NA12489,NA18860,NA12155,NA18909,NA18907,NA12749,NA19132,NA18508,NA12872,NA19114,NA19190,NA12802,NA15510,NA11993,NA12239,NA06985,NA19240,NA18858,NA12004,NA12414,NA18975,NA19108,NA19099,NA18505,NA18861,NA19129,NA12776;num_samples_tested=70;frequency=45.71%;num_unique_samples_tested=67;nr_frequency=47.76%;PopulationSummary=European 14:Asian 1:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	10499	86506	.	.	.	ID=gssv30;Name=gssv30;variant_type=CNV;variant_sub_type=Gain;outer_start=10001;inner_start=10499;inner_end=86506;outer_end=92392;inner_rank=7;num_variants=32;variants=essv75141,essv63480,essv65410,essv33662,essv36301,essv45662,essv66858,essv83994,essv57788,nssv14768,nssv14790,nssv14784,essv68486,essv42378,essv43633,essv44330,essv55201,essv47291,essv53480,essv59014,nssv14781,essv61349,essv75636,essv78929,essv36569,essv48828,essv82243,essv77852,essv56500,nssv14770,nssv14771,nssv18117;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=32;samples=NA07037,NA12828,NA11894,NA19221,NA19147,NA12489,NA18860,NA12155,NA18909,NA18907,NA12749,NA19132,NA18508,NA12872,NA19114,NA19190,NA12802,NA15510,NA11993,NA12239,NA06985,NA19240,NA18858,NA12004,NA12414,NA18975,NA19108,NA19099,NA18505,NA18861,NA19129,NA12776;num_samples_tested=70;frequency=45.71%;num_unique_samples_tested=67;nr_frequency=47.76%;PopulationSummary=European 14:Asian 1:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	92392	92392	.	.	.	ID=gssv30;Name=gssv30;variant_type=CNV;variant_sub_type=Gain;outer_start=10001;inner_start=10499;inner_end=86506;outer_end=92392;inner_rank=7;num_variants=32;variants=essv75141,essv63480,essv65410,essv33662,essv36301,essv45662,essv66858,essv83994,essv57788,nssv14768,nssv14790,nssv14784,essv68486,essv42378,essv43633,essv44330,essv55201,essv47291,essv53480,essv59014,nssv14781,essv61349,essv75636,essv78929,essv36569,essv48828,essv82243,essv77852,essv56500,nssv14770,nssv14771,nssv18117;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=32;samples=NA07037,NA12828,NA11894,NA19221,NA19147,NA12489,NA18860,NA12155,NA18909,NA18907,NA12749,NA19132,NA18508,NA12872,NA19114,NA19190,NA12802,NA15510,NA11993,NA12239,NA06985,NA19240,NA18858,NA12004,NA12414,NA18975,NA19108,NA19099,NA18505,NA18861,NA19129,NA12776;num_samples_tested=70;frequency=45.71%;num_unique_samples_tested=67;nr_frequency=47.76%;PopulationSummary=European 14:Asian 1:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1601719	1601719	.	.	.	ID=gssv31;Name=gssv31;variant_type=CNV;variant_sub_type=Loss;outer_start=1601719;inner_start=1601719;inner_end=1682577;outer_end=1685076;inner_rank=8;num_variants=7;variants=essv9841025,essv9841026,essv9841027,nssv21448,nssv21436,nssv26882,nssv28542;num_studies=2;studies=Perry2008,1000GenomesPhase3;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,ADM2;num_samples=7;samples=NA12740,NA18552,NA19144,HG02700,HG03858,NA18504,NA19443;num_samples_tested=2534;frequency=0.28%;num_unique_samples_tested=2514;nr_frequency=0.27%;PopulationSummary=European 1:Asian 3:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1601719	1682577	.	.	.	ID=gssv31;Name=gssv31;variant_type=CNV;variant_sub_type=Loss;outer_start=1601719;inner_start=1601719;inner_end=1682577;outer_end=1685076;inner_rank=8;num_variants=7;variants=essv9841025,essv9841026,essv9841027,nssv21448,nssv21436,nssv26882,nssv28542;num_studies=2;studies=Perry2008,1000GenomesPhase3;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,ADM2;num_samples=7;samples=NA12740,NA18552,NA19144,HG02700,HG03858,NA18504,NA19443;num_samples_tested=2534;frequency=0.28%;num_unique_samples_tested=2514;nr_frequency=0.27%;PopulationSummary=European 1:Asian 3:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1685076	1685076	.	.	.	ID=gssv31;Name=gssv31;variant_type=CNV;variant_sub_type=Loss;outer_start=1601719;inner_start=1601719;inner_end=1682577;outer_end=1685076;inner_rank=8;num_variants=7;variants=essv9841025,essv9841026,essv9841027,nssv21448,nssv21436,nssv26882,nssv28542;num_studies=2;studies=Perry2008,1000GenomesPhase3;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,ADM2;num_samples=7;samples=NA12740,NA18552,NA19144,HG02700,HG03858,NA18504,NA19443;num_samples_tested=2534;frequency=0.28%;num_unique_samples_tested=2514;nr_frequency=0.27%;PopulationSummary=European 1:Asian 3:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1582548	1582548	.	.	.	ID=gssv33;Name=gssv33;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1582548;inner_start=1586003;inner_end=1650097;outer_end=1657787;inner_rank=8;num_variants=9;variants=essv9749535,nssv1436322,essv5874268,essv6500381,nssv1435646,essv9840989,essv9840990,essv6457362,nssv2997170;num_studies=5;studies=Park2010,Boomsma2014,1000GenomesPhase1,1000GenomesPhase3,Dogan2014;num_platforms=4;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing,Illumina_HiSeq,Agilent24M;num_algorithms=5;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,ReadDepth,ADM2;num_samples=9;samples=HG01354,NA18566,NA18982,NA12400,HG01806,NA18542,HG03634,BILGI_BIOE,sample_essv9749535;num_samples_tested=4357;frequency=0.21%;num_unique_samples_tested=3340;nr_frequency=0.26%;PopulationSummary=European 2:Asian 5:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1586003	1650097	.	.	.	ID=gssv33;Name=gssv33;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1582548;inner_start=1586003;inner_end=1650097;outer_end=1657787;inner_rank=8;num_variants=9;variants=essv9749535,nssv1436322,essv5874268,essv6500381,nssv1435646,essv9840989,essv9840990,essv6457362,nssv2997170;num_studies=5;studies=Park2010,Boomsma2014,1000GenomesPhase1,1000GenomesPhase3,Dogan2014;num_platforms=4;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing,Illumina_HiSeq,Agilent24M;num_algorithms=5;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,ReadDepth,ADM2;num_samples=9;samples=HG01354,NA18566,NA18982,NA12400,HG01806,NA18542,HG03634,BILGI_BIOE,sample_essv9749535;num_samples_tested=4357;frequency=0.21%;num_unique_samples_tested=3340;nr_frequency=0.26%;PopulationSummary=European 2:Asian 5:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1657787	1657787	.	.	.	ID=gssv33;Name=gssv33;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1582548;inner_start=1586003;inner_end=1650097;outer_end=1657787;inner_rank=8;num_variants=9;variants=essv9749535,nssv1436322,essv5874268,essv6500381,nssv1435646,essv9840989,essv9840990,essv6457362,nssv2997170;num_studies=5;studies=Park2010,Boomsma2014,1000GenomesPhase1,1000GenomesPhase3,Dogan2014;num_platforms=4;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing,Illumina_HiSeq,Agilent24M;num_algorithms=5;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,ReadDepth,ADM2;num_samples=9;samples=HG01354,NA18566,NA18982,NA12400,HG01806,NA18542,HG03634,BILGI_BIOE,sample_essv9749535;num_samples_tested=4357;frequency=0.21%;num_unique_samples_tested=3340;nr_frequency=0.26%;PopulationSummary=European 2:Asian 5:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	403927	403927	.	.	.	ID=gssv34;Name=gssv34;variant_type=CNV;variant_sub_type=Loss;outer_start=403927;inner_start=408501;inner_end=467896;outer_end=471337;inner_rank=7;num_variants=4;variants=essv76138,essv82368,nssv18096,essv57736;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=4;samples=NA10863,NA11993,NA19114,NA12414;num_samples_tested=70;frequency=5.71%;num_unique_samples_tested=67;nr_frequency=5.97%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	408501	467896	.	.	.	ID=gssv34;Name=gssv34;variant_type=CNV;variant_sub_type=Loss;outer_start=403927;inner_start=408501;inner_end=467896;outer_end=471337;inner_rank=7;num_variants=4;variants=essv76138,essv82368,nssv18096,essv57736;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=4;samples=NA10863,NA11993,NA19114,NA12414;num_samples_tested=70;frequency=5.71%;num_unique_samples_tested=67;nr_frequency=5.97%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	471337	471337	.	.	.	ID=gssv34;Name=gssv34;variant_type=CNV;variant_sub_type=Loss;outer_start=403927;inner_start=408501;inner_end=467896;outer_end=471337;inner_rank=7;num_variants=4;variants=essv76138,essv82368,nssv18096,essv57736;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=4;samples=NA10863,NA11993,NA19114,NA12414;num_samples_tested=70;frequency=5.71%;num_unique_samples_tested=67;nr_frequency=5.97%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	37889	37889	.	.	.	ID=gssv38;Name=gssv38;variant_type=CNV;variant_sub_type=Gain;outer_start=37889;inner_start=39348;inner_end=90827;outer_end=104304;inner_rank=7;num_variants=6;variants=nssv18113,nssv14780,nssv14789,nssv18103,essv76745,nssv14776;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,NimbleGen42M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=6;samples=NA18552,NA18972,NA18853,NA19173,NA18511,NA18504;num_samples_tested=70;frequency=8.57%;num_unique_samples_tested=67;nr_frequency=8.95%;PopulationSummary=European 0:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	39348	90827	.	.	.	ID=gssv38;Name=gssv38;variant_type=CNV;variant_sub_type=Gain;outer_start=37889;inner_start=39348;inner_end=90827;outer_end=104304;inner_rank=7;num_variants=6;variants=nssv18113,nssv14780,nssv14789,nssv18103,essv76745,nssv14776;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,NimbleGen42M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=6;samples=NA18552,NA18972,NA18853,NA19173,NA18511,NA18504;num_samples_tested=70;frequency=8.57%;num_unique_samples_tested=67;nr_frequency=8.95%;PopulationSummary=European 0:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	104304	104304	.	.	.	ID=gssv38;Name=gssv38;variant_type=CNV;variant_sub_type=Gain;outer_start=37889;inner_start=39348;inner_end=90827;outer_end=104304;inner_rank=7;num_variants=6;variants=nssv18113,nssv14780,nssv14789,nssv18103,essv76745,nssv14776;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,NimbleGen42M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=6;samples=NA18552,NA18972,NA18853,NA19173,NA18511,NA18504;num_samples_tested=70;frequency=8.57%;num_unique_samples_tested=67;nr_frequency=8.95%;PopulationSummary=European 0:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1616990	1616990	.	.	.	ID=gssv39;Name=gssv39;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1616990;inner_start=1626897;inner_end=1676042;outer_end=1687927;inner_rank=8;num_variants=546;variants=essv7029856,essv9837043,essv9768089,essv9767978,nssv708620,essv9788866,essv9789977,essv9791088,essv9792199,essv9793310,essv9794421,essv9795532,essv9796643,essv9797754,essv9798865,essv9799977,essv9801088,essv9802199,essv9803310,essv9804421,essv9805532,essv9806643,essv9807754,essv9808865,essv9809976,essv9787754,essv9841071,essv9841072,essv9841073,essv9841074,essv9841075,essv9841076,essv9841077,essv9841078,essv9841079,essv9841080,essv9841081,essv9841082,essv9841083,essv9841084,essv9841085,essv9841086,essv9841087,essv9841088,essv9841089,essv9841090,essv9841091,essv9841092,essv9841093,essv9841094,essv9841095,essv9841096,essv9841097,essv9841098,essv9841099,essv9841100,essv9841101,essv9841102,essv9841103,essv9841104,essv9841105,essv9841106,essv9841107,essv9841108,essv9841109,essv9841110,essv9841111,essv9841112,essv9841113,essv9841114,essv9841115,essv9841116,essv9841117,essv9841118,essv9841119,essv9841120,essv9841121,essv9841122,essv9841123,essv9841124,essv9841125,essv9841126,essv9841127,essv9841128,essv9841129,essv9841130,essv9841131,essv9841132,essv9841133,essv9841134,essv9841135,essv9841136,essv9841137,essv9841138,essv9841139,essv9841140,essv9841141,essv9841142,essv9841143,essv9841144,essv9841145,essv9841146,essv9841147,essv9841148,essv9841149,essv9841150,essv9841151,essv9841152,essv9841153,essv9841154,essv9841155,essv9841156,essv9841157,essv9841158,essv9841159,essv9841160,essv9841161,essv9841162,essv9841163,essv9841164,essv9841165,essv9841166,essv9841167,essv9841168,essv9841169,essv9841170,essv9841171,essv9841172,essv9841173,essv9841174,essv9841175,essv9841176,essv9841177,essv9841178,essv9841179,essv9841180,essv9841181,essv9841182,essv9841183,essv9841184,essv9841185,essv9841186,essv9841187,essv9841188,essv9785532,essv9786643,essv9811088,essv9812199,essv9814421,essv9815532,essv9816643,essv9817754,essv9818865,essv9819976,essv9821087,essv9822199,essv9823310,essv9824421,essv9825532,essv9813310,essv9841189,essv9841190,essv9841191,essv9841192,essv9841193,essv9841194,essv9841195,essv9841196,essv9841197,essv9841198,essv9841199,essv9841200,essv9841201,essv9841202,essv9841203,essv9841204,essv9841205,essv9841206,essv9841207,essv9841208,essv9841209,essv9841210,essv9841211,essv9841212,essv9841213,essv9841214,essv9841215,essv9841216,essv9841217,essv9841218,essv9841219,essv9841220,essv9841221,essv9841222,essv9841223,essv9841224,essv9841225,essv9841226,essv9841227,essv9841228,essv9841229,essv9841230,essv9841231,essv9841232,essv9841233,essv9841234,essv9841235,essv9841236,essv9841237,essv9841238,essv9841239,essv9841240,essv9841241,essv9841242,essv9841243,essv9841244,essv9841245,essv9841246,essv9841247,essv9841248,essv9841249,essv9841250,essv9841251,essv9841252,essv9841253,essv9841254,essv9841255,essv9841256,essv9841257,essv9841258,essv9841259,essv9841260,essv9841261,essv9841262,essv9841263,essv9841264,essv9841265,essv9841266,essv9841267,essv9841268,essv9841269,essv9841270,essv9841271,essv9841272,essv9841273,essv9841274,essv9841275,essv9841276,essv9841277,essv9841278,essv9841279,essv9841280,essv9841281,essv9841282,essv9841283,essv9841284,essv9841285,essv9841286,essv9841287,essv9841288,essv9841289,essv9841290,essv9841291,essv9841292,essv9841293,essv9841294,essv9841295,essv9841296,essv9841297,essv9841298,essv9841299,essv9841300,essv9841301,essv9841302,essv9841303,essv9841304,essv9841305,essv9841306,essv9841307,essv9841308,essv9841309,essv9841310,essv9841311,essv9841312,essv9841313,essv9841314,essv9841315,essv9841316,essv9841317,essv9841318,essv9841319,essv9841320,essv9841321,essv9841322,essv9841323,essv9841324,essv9841325,essv9841326,essv9841327,essv9841328,essv9841329,essv9841330,essv9841331,essv9841332,essv9841333,essv9841334,essv9841335,essv9841336,essv9841337,essv9841338,essv9841339,essv9841340,essv9841341,essv9841342,essv9841343,essv9841344,essv9841345,essv9841346,essv9841347,essv9841348,essv9841349,essv9841350,essv9841351,essv9841352,essv9841353,essv9841354,essv9841355,essv9841356,essv9841357,essv9841358,essv9841359,essv9841360,essv9841361,essv9841362,essv9841363,essv9841364,essv9841365,essv9841366,essv9841367,essv9841368,essv9841369,essv9841370,essv9841371,essv9841372,essv9841373,essv9841374,essv9841375,essv9841376,essv9841377,essv9841378,essv9841379,essv9841380,essv9841381,essv9841382,essv9841383,essv9841384,essv9841385,essv9841386,essv9841387,essv9841388,essv9841389,essv9841390,essv9841391,essv9841392,essv9841393,essv9841394,essv9841395,essv9841396,essv9841397,essv9841398,essv9841399,essv9841400,essv9841401,essv9841402,essv9841403,essv9841404,essv9841405,essv9841406,essv9841407,essv9841408,essv9841409,essv9841410,essv9841411,essv9841412,essv9841413,essv9841414,essv9841415,essv9841416,essv9841417,essv9841418,essv9841419,essv9841420,essv9841421,essv9841422,essv9841423,essv9841424,essv9841425,essv9841426,essv9841427,essv9841428,essv9841429,essv9841430,essv9841431,essv9841432,essv9841433,essv9841434,essv9841435,essv9841436,essv9841437,essv9841438,essv9841439,essv9841440,essv9841441,essv9826643,essv9828865,essv9829976,essv9831087,essv9832198,essv9833310,essv9834421,essv9834710,essv9834821,essv9834932,essv9835043,essv9835154,essv9835265,essv9835376,essv9835487,essv9835599,essv9835710,essv9835821,essv9835932,essv9836043,essv9836154,essv9836265,essv9836376,essv9836487,essv9836598,essv9836710,essv9836821,essv9836932,essv7004886,essv7004887,essv7004888,essv7004890,essv7004891,essv7004892,essv7004893,essv7004894,essv7004895,essv7004896,essv7004897,essv7004898,essv7004899,essv7004901,essv7004902,essv7004903,essv7011854,essv7012966,essv7014077,essv7015188,essv7016299,essv7017410,essv7018521,essv7019632,essv7020743,essv7021854,essv7022965,essv7024077,essv7025188,essv7026299,essv7027079,essv7027190,essv7027301,essv7027412,essv7027523,essv7027634,essv7027745,essv7027857,essv7027968,essv7028079,essv7028190,essv7028301,essv7028412,essv7028523,essv7028634,essv7028745,essv7028856,essv7028968,essv7029079,essv7029190,essv7029301,essv7029412,essv7029523,essv7029634,essv7029745,nssv1616835,nssv1616946,nssv1617057,nssv1617168,nssv1617279,nssv1617358,nssv1617369,nssv1617380,nssv1617392,nssv1617403,nssv1617414,nssv1617425,nssv1617436,nssv1617447,nssv1617458,nssv1617469,nssv1617480,nssv1617491,nssv1617503,nssv1617514,nssv1617525,nssv1617536,nssv1617547,nssv1617558,nssv1617569,nssv1617580,nssv1617591,nssv1617602,nssv1617614,nssv1617625,nssv1617636,essv9827754,essv9837154,essv9837265,essv9766645,essv9766756,essv9766867,essv9766978,essv9767089,essv9767200,essv9767311,essv9767422,essv9767533,essv9767644,essv9767756,essv9767867,essv9837376,essv9837487,essv9837598,essv9837709;num_studies=5;studies=Uddin2014,McCarroll2008,Vogler2010,Cooper2011,1000GenomesPhase3;num_platforms=4;platforms=CytoScanHD_2.7M,Affymetrix6.0,Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=5;algorithms=PennCNV+Birdseye,ChAS,RD+PEM,Custom_HMM,BirdsEye;num_samples=409;samples=401640WJ,NA19777,400109LJ,HG03370,HG02837,HG03681,HG03833,HG01393,400375KA,401894PD,HG01396,HG03279,401459HF,HG03803,NA18552,SW_1428,NA06989,SW_0119,HG01456,SW_0058,401735LE,HG01518,HG01066,HG01064,SW_0187,NA19070,HG01308,401274PA,401589HP,NA20846,NA20847,NA20849,401102RD,400502GS,400248JO,401664SD,NA20362,RW_0560,HG00282,HG00284,HG02154,HG01603,NA18957,HG02601,SW_1120,401540GM,400458LS,SW_1483,NA19328,401096SL,HG02128,400191MP,NA12740,HG04229,HG04227,HG01111,HG03646,RW_0057,HG03899,NA19740,400076LC,sample_nssv708620,HG02330,NA12144,HG02239,HG03800,HG01182,HG03967,HG01188,NA20581,HG00259,SW_1262,SW_0648,HG03117,HG04131,400821FE,401438HT,HG00121,401353BC,NA20127,NA20539,400739SS,NA20753,NA21116,NA20832,NA18994,401979TB,HG03745,HG00637,401117GM,401067BD,400108BJ,NA12843,401841OB,NA11920,HG02165,HG02282,NA20902,HG01840,400930MK,HG01790,401592NR,HG01798,SW_1289,NA19443,HG01593,HG03246,NA19707,401113MJ,HG03455,HG03692,401250WD,HG03696,HG04211,NA18645,NA18647,HG03517,NA19207,NA19204,NA19205,NA19200,NA19208,HG00557,SW_0120,HG03097,HG03099,SW_1436,NA19384,HG01936,HG04173,HG04176,400155CW,HG02309,HG01277,HG01500,HG01501,SW_1459,HG03858,HG02851,SW_0198,HG03856,400494ML,HG01375,HG01374,401395OP,400199SA,NA20877,NA20876,HG00174,SW_0639,SW_1335,HG03781,HG00178,HG01431,NA20785,HG04107,SW_0061,401612HB,400439IM,HG01801,401958MF,NA18940,SW_1156,RW_0119,400758KP,HG01757,HG04195,RW_0529,RW_0523,NA18635,402042BJ,HG00382,NA20896,NA20895,NA18934,NA20892,HG00452,HG00596,401444LD,NA19081,RW_0062,HG00693,HG02976,HG01974,HG03198,400094RS,NA11892,400376SJ,HG00365,402009WP,HG03352,HG03351,HG02952,HG03428,HG03812,HG00253,HG00250,400249BC,HG02223,HG00310,HG00258,SW_1372,401460LW,HG03103,HG00139,SW_0072,NA12718,HG02355,HG02351,HG04026,HG01248,NA18504,HG01242,NA20505,400203NA,NA12828,HG02134,NA07056,NA10835,400383HL,NA20340,HG04099,RW_0646,HG01852,401005BL,400213DB,HG02073,401595BL,HG01784,401858TP,NA18976,NA21102,SW_0060,400800MW,NA21109,HG03258,NA19654,NA19309,NA19717,HG02700,401956DQ,NA21088,401111LH,400227MM,NA12762,NA18538,NA18537,SW_1404,401491BB,400833BB,HG04063,HG01531,HG01530,HG01927,HG03224,RW_0324,HG02490,HG03388,400294HD,NA12003,NA12006,401268PS,NA20544,HG01281,HG01047,HG01048,NA18620,SW_1243,400070PC,SW_0144,SW_1083,HG01403,RW_0359,HG03485,NA21135,400041LJ,SW_1149,NA20815,SW_1147,SW_1396,NA19430,HG00610,RW_0510,RW_0512,NA20851,400177CG,NA20804,402008MC,HG01868,HG01139,NA19391,HG02558,RW_0075,RW_0179,HG00257,SW_0760,HG03945,NA18582,HG00362,HG03823,NA19346,HG03752,400156WT,SW_0086,400178RH,HG00531,NA18565,NA18596,SW_1366,400083TG,NA10839,HG01441,HG01912,SW_0062,NA20516,NA20512,401465TB,HG04015,NA20518,HG01311,SW_1448,HG02938,401860TJ,401734PG,SW_1189,401636WR,HG01709,HG00656,HG03765,HG01702,HG02501,HG02502,400793BR,HG00155,400501SJ,RW_0221,SW_1086,HG02060,401414CR,NA19145,NA19144,HG02143,HG01676,SW_0589,NA12889,HG01170,HG01173,SW_0805,HG01889,400920MK,401386WA,400641WJ,NA21094,400319HT,NA21097,NA21090,HG03470,NA19792,NA12751,NA12750,400343BD,SW_0200,HG00479,HG01122,HG01685,NA18523,401490TL,401773AM,HG00581,HG01524,HG01354,HG00336,HG00331,400712GC,NA18638,HG01191,HG01190,HG03976,NA18631,NA18632,HG02433,HG01551,401855RE,RW_0341,SW_1414,NA20528,HG02026,SW_1139,NA20808,NA20809,HG01632,HG01630,400231LP,NA20803,HG03052,NA12248,401526WB,HG03757,RW_0663,401036WS,SW_0831,HG03634,HG02057,401087SF,HG02053,HG02728,NA18852,NA18854,401847RK;num_samples_tested=6256;frequency=6.54%;num_unique_samples_tested=6077;nr_frequency=6.73%;PopulationSummary=European 192:Asian 83:Mexican 5:African 74:Admixed 4:MiddleEast 0:NativeAmerican 18:NorthAmerican 8:SouthAmerican 25:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1626897	1676042	.	.	.	ID=gssv39;Name=gssv39;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1616990;inner_start=1626897;inner_end=1676042;outer_end=1687927;inner_rank=8;num_variants=546;variants=essv7029856,essv9837043,essv9768089,essv9767978,nssv708620,essv9788866,essv9789977,essv9791088,essv9792199,essv9793310,essv9794421,essv9795532,essv9796643,essv9797754,essv9798865,essv9799977,essv9801088,essv9802199,essv9803310,essv9804421,essv9805532,essv9806643,essv9807754,essv9808865,essv9809976,essv9787754,essv9841071,essv9841072,essv9841073,essv9841074,essv9841075,essv9841076,essv9841077,essv9841078,essv9841079,essv9841080,essv9841081,essv9841082,essv9841083,essv9841084,essv9841085,essv9841086,essv9841087,essv9841088,essv9841089,essv9841090,essv9841091,essv9841092,essv9841093,essv9841094,essv9841095,essv9841096,essv9841097,essv9841098,essv9841099,essv9841100,essv9841101,essv9841102,essv9841103,essv9841104,essv9841105,essv9841106,essv9841107,essv9841108,essv9841109,essv9841110,essv9841111,essv9841112,essv9841113,essv9841114,essv9841115,essv9841116,essv9841117,essv9841118,essv9841119,essv9841120,essv9841121,essv9841122,essv9841123,essv9841124,essv9841125,essv9841126,essv9841127,essv9841128,essv9841129,essv9841130,essv9841131,essv9841132,essv9841133,essv9841134,essv9841135,essv9841136,essv9841137,essv9841138,essv9841139,essv9841140,essv9841141,essv9841142,essv9841143,essv9841144,essv9841145,essv9841146,essv9841147,essv9841148,essv9841149,essv9841150,essv9841151,essv9841152,essv9841153,essv9841154,essv9841155,essv9841156,essv9841157,essv9841158,essv9841159,essv9841160,essv9841161,essv9841162,essv9841163,essv9841164,essv9841165,essv9841166,essv9841167,essv9841168,essv9841169,essv9841170,essv9841171,essv9841172,essv9841173,essv9841174,essv9841175,essv9841176,essv9841177,essv9841178,essv9841179,essv9841180,essv9841181,essv9841182,essv9841183,essv9841184,essv9841185,essv9841186,essv9841187,essv9841188,essv9785532,essv9786643,essv9811088,essv9812199,essv9814421,essv9815532,essv9816643,essv9817754,essv9818865,essv9819976,essv9821087,essv9822199,essv9823310,essv9824421,essv9825532,essv9813310,essv9841189,essv9841190,essv9841191,essv9841192,essv9841193,essv9841194,essv9841195,essv9841196,essv9841197,essv9841198,essv9841199,essv9841200,essv9841201,essv9841202,essv9841203,essv9841204,essv9841205,essv9841206,essv9841207,essv9841208,essv9841209,essv9841210,essv9841211,essv9841212,essv9841213,essv9841214,essv9841215,essv9841216,essv9841217,essv9841218,essv9841219,essv9841220,essv9841221,essv9841222,essv9841223,essv9841224,essv9841225,essv9841226,essv9841227,essv9841228,essv9841229,essv9841230,essv9841231,essv9841232,essv9841233,essv9841234,essv9841235,essv9841236,essv9841237,essv9841238,essv9841239,essv9841240,essv9841241,essv9841242,essv9841243,essv9841244,essv9841245,essv9841246,essv9841247,essv9841248,essv9841249,essv9841250,essv9841251,essv9841252,essv9841253,essv9841254,essv9841255,essv9841256,essv9841257,essv9841258,essv9841259,essv9841260,essv9841261,essv9841262,essv9841263,essv9841264,essv9841265,essv9841266,essv9841267,essv9841268,essv9841269,essv9841270,essv9841271,essv9841272,essv9841273,essv9841274,essv9841275,essv9841276,essv9841277,essv9841278,essv9841279,essv9841280,essv9841281,essv9841282,essv9841283,essv9841284,essv9841285,essv9841286,essv9841287,essv9841288,essv9841289,essv9841290,essv9841291,essv9841292,essv9841293,essv9841294,essv9841295,essv9841296,essv9841297,essv9841298,essv9841299,essv9841300,essv9841301,essv9841302,essv9841303,essv9841304,essv9841305,essv9841306,essv9841307,essv9841308,essv9841309,essv9841310,essv9841311,essv9841312,essv9841313,essv9841314,essv9841315,essv9841316,essv9841317,essv9841318,essv9841319,essv9841320,essv9841321,essv9841322,essv9841323,essv9841324,essv9841325,essv9841326,essv9841327,essv9841328,essv9841329,essv9841330,essv9841331,essv9841332,essv9841333,essv9841334,essv9841335,essv9841336,essv9841337,essv9841338,essv9841339,essv9841340,essv9841341,essv9841342,essv9841343,essv9841344,essv9841345,essv9841346,essv9841347,essv9841348,essv9841349,essv9841350,essv9841351,essv9841352,essv9841353,essv9841354,essv9841355,essv9841356,essv9841357,essv9841358,essv9841359,essv9841360,essv9841361,essv9841362,essv9841363,essv9841364,essv9841365,essv9841366,essv9841367,essv9841368,essv9841369,essv9841370,essv9841371,essv9841372,essv9841373,essv9841374,essv9841375,essv9841376,essv9841377,essv9841378,essv9841379,essv9841380,essv9841381,essv9841382,essv9841383,essv9841384,essv9841385,essv9841386,essv9841387,essv9841388,essv9841389,essv9841390,essv9841391,essv9841392,essv9841393,essv9841394,essv9841395,essv9841396,essv9841397,essv9841398,essv9841399,essv9841400,essv9841401,essv9841402,essv9841403,essv9841404,essv9841405,essv9841406,essv9841407,essv9841408,essv9841409,essv9841410,essv9841411,essv9841412,essv9841413,essv9841414,essv9841415,essv9841416,essv9841417,essv9841418,essv9841419,essv9841420,essv9841421,essv9841422,essv9841423,essv9841424,essv9841425,essv9841426,essv9841427,essv9841428,essv9841429,essv9841430,essv9841431,essv9841432,essv9841433,essv9841434,essv9841435,essv9841436,essv9841437,essv9841438,essv9841439,essv9841440,essv9841441,essv9826643,essv9828865,essv9829976,essv9831087,essv9832198,essv9833310,essv9834421,essv9834710,essv9834821,essv9834932,essv9835043,essv9835154,essv9835265,essv9835376,essv9835487,essv9835599,essv9835710,essv9835821,essv9835932,essv9836043,essv9836154,essv9836265,essv9836376,essv9836487,essv9836598,essv9836710,essv9836821,essv9836932,essv7004886,essv7004887,essv7004888,essv7004890,essv7004891,essv7004892,essv7004893,essv7004894,essv7004895,essv7004896,essv7004897,essv7004898,essv7004899,essv7004901,essv7004902,essv7004903,essv7011854,essv7012966,essv7014077,essv7015188,essv7016299,essv7017410,essv7018521,essv7019632,essv7020743,essv7021854,essv7022965,essv7024077,essv7025188,essv7026299,essv7027079,essv7027190,essv7027301,essv7027412,essv7027523,essv7027634,essv7027745,essv7027857,essv7027968,essv7028079,essv7028190,essv7028301,essv7028412,essv7028523,essv7028634,essv7028745,essv7028856,essv7028968,essv7029079,essv7029190,essv7029301,essv7029412,essv7029523,essv7029634,essv7029745,nssv1616835,nssv1616946,nssv1617057,nssv1617168,nssv1617279,nssv1617358,nssv1617369,nssv1617380,nssv1617392,nssv1617403,nssv1617414,nssv1617425,nssv1617436,nssv1617447,nssv1617458,nssv1617469,nssv1617480,nssv1617491,nssv1617503,nssv1617514,nssv1617525,nssv1617536,nssv1617547,nssv1617558,nssv1617569,nssv1617580,nssv1617591,nssv1617602,nssv1617614,nssv1617625,nssv1617636,essv9827754,essv9837154,essv9837265,essv9766645,essv9766756,essv9766867,essv9766978,essv9767089,essv9767200,essv9767311,essv9767422,essv9767533,essv9767644,essv9767756,essv9767867,essv9837376,essv9837487,essv9837598,essv9837709;num_studies=5;studies=Uddin2014,McCarroll2008,Vogler2010,Cooper2011,1000GenomesPhase3;num_platforms=4;platforms=CytoScanHD_2.7M,Affymetrix6.0,Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=5;algorithms=PennCNV+Birdseye,ChAS,RD+PEM,Custom_HMM,BirdsEye;num_samples=409;samples=401640WJ,NA19777,400109LJ,HG03370,HG02837,HG03681,HG03833,HG01393,400375KA,401894PD,HG01396,HG03279,401459HF,HG03803,NA18552,SW_1428,NA06989,SW_0119,HG01456,SW_0058,401735LE,HG01518,HG01066,HG01064,SW_0187,NA19070,HG01308,401274PA,401589HP,NA20846,NA20847,NA20849,401102RD,400502GS,400248JO,401664SD,NA20362,RW_0560,HG00282,HG00284,HG02154,HG01603,NA18957,HG02601,SW_1120,401540GM,400458LS,SW_1483,NA19328,401096SL,HG02128,400191MP,NA12740,HG04229,HG04227,HG01111,HG03646,RW_0057,HG03899,NA19740,400076LC,sample_nssv708620,HG02330,NA12144,HG02239,HG03800,HG01182,HG03967,HG01188,NA20581,HG00259,SW_1262,SW_0648,HG03117,HG04131,400821FE,401438HT,HG00121,401353BC,NA20127,NA20539,400739SS,NA20753,NA21116,NA20832,NA18994,401979TB,HG03745,HG00637,401117GM,401067BD,400108BJ,NA12843,401841OB,NA11920,HG02165,HG02282,NA20902,HG01840,400930MK,HG01790,401592NR,HG01798,SW_1289,NA19443,HG01593,HG03246,NA19707,401113MJ,HG03455,HG03692,401250WD,HG03696,HG04211,NA18645,NA18647,HG03517,NA19207,NA19204,NA19205,NA19200,NA19208,HG00557,SW_0120,HG03097,HG03099,SW_1436,NA19384,HG01936,HG04173,HG04176,400155CW,HG02309,HG01277,HG01500,HG01501,SW_1459,HG03858,HG02851,SW_0198,HG03856,400494ML,HG01375,HG01374,401395OP,400199SA,NA20877,NA20876,HG00174,SW_0639,SW_1335,HG03781,HG00178,HG01431,NA20785,HG04107,SW_0061,401612HB,400439IM,HG01801,401958MF,NA18940,SW_1156,RW_0119,400758KP,HG01757,HG04195,RW_0529,RW_0523,NA18635,402042BJ,HG00382,NA20896,NA20895,NA18934,NA20892,HG00452,HG00596,401444LD,NA19081,RW_0062,HG00693,HG02976,HG01974,HG03198,400094RS,NA11892,400376SJ,HG00365,402009WP,HG03352,HG03351,HG02952,HG03428,HG03812,HG00253,HG00250,400249BC,HG02223,HG00310,HG00258,SW_1372,401460LW,HG03103,HG00139,SW_0072,NA12718,HG02355,HG02351,HG04026,HG01248,NA18504,HG01242,NA20505,400203NA,NA12828,HG02134,NA07056,NA10835,400383HL,NA20340,HG04099,RW_0646,HG01852,401005BL,400213DB,HG02073,401595BL,HG01784,401858TP,NA18976,NA21102,SW_0060,400800MW,NA21109,HG03258,NA19654,NA19309,NA19717,HG02700,401956DQ,NA21088,401111LH,400227MM,NA12762,NA18538,NA18537,SW_1404,401491BB,400833BB,HG04063,HG01531,HG01530,HG01927,HG03224,RW_0324,HG02490,HG03388,400294HD,NA12003,NA12006,401268PS,NA20544,HG01281,HG01047,HG01048,NA18620,SW_1243,400070PC,SW_0144,SW_1083,HG01403,RW_0359,HG03485,NA21135,400041LJ,SW_1149,NA20815,SW_1147,SW_1396,NA19430,HG00610,RW_0510,RW_0512,NA20851,400177CG,NA20804,402008MC,HG01868,HG01139,NA19391,HG02558,RW_0075,RW_0179,HG00257,SW_0760,HG03945,NA18582,HG00362,HG03823,NA19346,HG03752,400156WT,SW_0086,400178RH,HG00531,NA18565,NA18596,SW_1366,400083TG,NA10839,HG01441,HG01912,SW_0062,NA20516,NA20512,401465TB,HG04015,NA20518,HG01311,SW_1448,HG02938,401860TJ,401734PG,SW_1189,401636WR,HG01709,HG00656,HG03765,HG01702,HG02501,HG02502,400793BR,HG00155,400501SJ,RW_0221,SW_1086,HG02060,401414CR,NA19145,NA19144,HG02143,HG01676,SW_0589,NA12889,HG01170,HG01173,SW_0805,HG01889,400920MK,401386WA,400641WJ,NA21094,400319HT,NA21097,NA21090,HG03470,NA19792,NA12751,NA12750,400343BD,SW_0200,HG00479,HG01122,HG01685,NA18523,401490TL,401773AM,HG00581,HG01524,HG01354,HG00336,HG00331,400712GC,NA18638,HG01191,HG01190,HG03976,NA18631,NA18632,HG02433,HG01551,401855RE,RW_0341,SW_1414,NA20528,HG02026,SW_1139,NA20808,NA20809,HG01632,HG01630,400231LP,NA20803,HG03052,NA12248,401526WB,HG03757,RW_0663,401036WS,SW_0831,HG03634,HG02057,401087SF,HG02053,HG02728,NA18852,NA18854,401847RK;num_samples_tested=6256;frequency=6.54%;num_unique_samples_tested=6077;nr_frequency=6.73%;PopulationSummary=European 192:Asian 83:Mexican 5:African 74:Admixed 4:MiddleEast 0:NativeAmerican 18:NorthAmerican 8:SouthAmerican 25:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1687927	1687927	.	.	.	ID=gssv39;Name=gssv39;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1616990;inner_start=1626897;inner_end=1676042;outer_end=1687927;inner_rank=8;num_variants=546;variants=essv7029856,essv9837043,essv9768089,essv9767978,nssv708620,essv9788866,essv9789977,essv9791088,essv9792199,essv9793310,essv9794421,essv9795532,essv9796643,essv9797754,essv9798865,essv9799977,essv9801088,essv9802199,essv9803310,essv9804421,essv9805532,essv9806643,essv9807754,essv9808865,essv9809976,essv9787754,essv9841071,essv9841072,essv9841073,essv9841074,essv9841075,essv9841076,essv9841077,essv9841078,essv9841079,essv9841080,essv9841081,essv9841082,essv9841083,essv9841084,essv9841085,essv9841086,essv9841087,essv9841088,essv9841089,essv9841090,essv9841091,essv9841092,essv9841093,essv9841094,essv9841095,essv9841096,essv9841097,essv9841098,essv9841099,essv9841100,essv9841101,essv9841102,essv9841103,essv9841104,essv9841105,essv9841106,essv9841107,essv9841108,essv9841109,essv9841110,essv9841111,essv9841112,essv9841113,essv9841114,essv9841115,essv9841116,essv9841117,essv9841118,essv9841119,essv9841120,essv9841121,essv9841122,essv9841123,essv9841124,essv9841125,essv9841126,essv9841127,essv9841128,essv9841129,essv9841130,essv9841131,essv9841132,essv9841133,essv9841134,essv9841135,essv9841136,essv9841137,essv9841138,essv9841139,essv9841140,essv9841141,essv9841142,essv9841143,essv9841144,essv9841145,essv9841146,essv9841147,essv9841148,essv9841149,essv9841150,essv9841151,essv9841152,essv9841153,essv9841154,essv9841155,essv9841156,essv9841157,essv9841158,essv9841159,essv9841160,essv9841161,essv9841162,essv9841163,essv9841164,essv9841165,essv9841166,essv9841167,essv9841168,essv9841169,essv9841170,essv9841171,essv9841172,essv9841173,essv9841174,essv9841175,essv9841176,essv9841177,essv9841178,essv9841179,essv9841180,essv9841181,essv9841182,essv9841183,essv9841184,essv9841185,essv9841186,essv9841187,essv9841188,essv9785532,essv9786643,essv9811088,essv9812199,essv9814421,essv9815532,essv9816643,essv9817754,essv9818865,essv9819976,essv9821087,essv9822199,essv9823310,essv9824421,essv9825532,essv9813310,essv9841189,essv9841190,essv9841191,essv9841192,essv9841193,essv9841194,essv9841195,essv9841196,essv9841197,essv9841198,essv9841199,essv9841200,essv9841201,essv9841202,essv9841203,essv9841204,essv9841205,essv9841206,essv9841207,essv9841208,essv9841209,essv9841210,essv9841211,essv9841212,essv9841213,essv9841214,essv9841215,essv9841216,essv9841217,essv9841218,essv9841219,essv9841220,essv9841221,essv9841222,essv9841223,essv9841224,essv9841225,essv9841226,essv9841227,essv9841228,essv9841229,essv9841230,essv9841231,essv9841232,essv9841233,essv9841234,essv9841235,essv9841236,essv9841237,essv9841238,essv9841239,essv9841240,essv9841241,essv9841242,essv9841243,essv9841244,essv9841245,essv9841246,essv9841247,essv9841248,essv9841249,essv9841250,essv9841251,essv9841252,essv9841253,essv9841254,essv9841255,essv9841256,essv9841257,essv9841258,essv9841259,essv9841260,essv9841261,essv9841262,essv9841263,essv9841264,essv9841265,essv9841266,essv9841267,essv9841268,essv9841269,essv9841270,essv9841271,essv9841272,essv9841273,essv9841274,essv9841275,essv9841276,essv9841277,essv9841278,essv9841279,essv9841280,essv9841281,essv9841282,essv9841283,essv9841284,essv9841285,essv9841286,essv9841287,essv9841288,essv9841289,essv9841290,essv9841291,essv9841292,essv9841293,essv9841294,essv9841295,essv9841296,essv9841297,essv9841298,essv9841299,essv9841300,essv9841301,essv9841302,essv9841303,essv9841304,essv9841305,essv9841306,essv9841307,essv9841308,essv9841309,essv9841310,essv9841311,essv9841312,essv9841313,essv9841314,essv9841315,essv9841316,essv9841317,essv9841318,essv9841319,essv9841320,essv9841321,essv9841322,essv9841323,essv9841324,essv9841325,essv9841326,essv9841327,essv9841328,essv9841329,essv9841330,essv9841331,essv9841332,essv9841333,essv9841334,essv9841335,essv9841336,essv9841337,essv9841338,essv9841339,essv9841340,essv9841341,essv9841342,essv9841343,essv9841344,essv9841345,essv9841346,essv9841347,essv9841348,essv9841349,essv9841350,essv9841351,essv9841352,essv9841353,essv9841354,essv9841355,essv9841356,essv9841357,essv9841358,essv9841359,essv9841360,essv9841361,essv9841362,essv9841363,essv9841364,essv9841365,essv9841366,essv9841367,essv9841368,essv9841369,essv9841370,essv9841371,essv9841372,essv9841373,essv9841374,essv9841375,essv9841376,essv9841377,essv9841378,essv9841379,essv9841380,essv9841381,essv9841382,essv9841383,essv9841384,essv9841385,essv9841386,essv9841387,essv9841388,essv9841389,essv9841390,essv9841391,essv9841392,essv9841393,essv9841394,essv9841395,essv9841396,essv9841397,essv9841398,essv9841399,essv9841400,essv9841401,essv9841402,essv9841403,essv9841404,essv9841405,essv9841406,essv9841407,essv9841408,essv9841409,essv9841410,essv9841411,essv9841412,essv9841413,essv9841414,essv9841415,essv9841416,essv9841417,essv9841418,essv9841419,essv9841420,essv9841421,essv9841422,essv9841423,essv9841424,essv9841425,essv9841426,essv9841427,essv9841428,essv9841429,essv9841430,essv9841431,essv9841432,essv9841433,essv9841434,essv9841435,essv9841436,essv9841437,essv9841438,essv9841439,essv9841440,essv9841441,essv9826643,essv9828865,essv9829976,essv9831087,essv9832198,essv9833310,essv9834421,essv9834710,essv9834821,essv9834932,essv9835043,essv9835154,essv9835265,essv9835376,essv9835487,essv9835599,essv9835710,essv9835821,essv9835932,essv9836043,essv9836154,essv9836265,essv9836376,essv9836487,essv9836598,essv9836710,essv9836821,essv9836932,essv7004886,essv7004887,essv7004888,essv7004890,essv7004891,essv7004892,essv7004893,essv7004894,essv7004895,essv7004896,essv7004897,essv7004898,essv7004899,essv7004901,essv7004902,essv7004903,essv7011854,essv7012966,essv7014077,essv7015188,essv7016299,essv7017410,essv7018521,essv7019632,essv7020743,essv7021854,essv7022965,essv7024077,essv7025188,essv7026299,essv7027079,essv7027190,essv7027301,essv7027412,essv7027523,essv7027634,essv7027745,essv7027857,essv7027968,essv7028079,essv7028190,essv7028301,essv7028412,essv7028523,essv7028634,essv7028745,essv7028856,essv7028968,essv7029079,essv7029190,essv7029301,essv7029412,essv7029523,essv7029634,essv7029745,nssv1616835,nssv1616946,nssv1617057,nssv1617168,nssv1617279,nssv1617358,nssv1617369,nssv1617380,nssv1617392,nssv1617403,nssv1617414,nssv1617425,nssv1617436,nssv1617447,nssv1617458,nssv1617469,nssv1617480,nssv1617491,nssv1617503,nssv1617514,nssv1617525,nssv1617536,nssv1617547,nssv1617558,nssv1617569,nssv1617580,nssv1617591,nssv1617602,nssv1617614,nssv1617625,nssv1617636,essv9827754,essv9837154,essv9837265,essv9766645,essv9766756,essv9766867,essv9766978,essv9767089,essv9767200,essv9767311,essv9767422,essv9767533,essv9767644,essv9767756,essv9767867,essv9837376,essv9837487,essv9837598,essv9837709;num_studies=5;studies=Uddin2014,McCarroll2008,Vogler2010,Cooper2011,1000GenomesPhase3;num_platforms=4;platforms=CytoScanHD_2.7M,Affymetrix6.0,Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=5;algorithms=PennCNV+Birdseye,ChAS,RD+PEM,Custom_HMM,BirdsEye;num_samples=409;samples=401640WJ,NA19777,400109LJ,HG03370,HG02837,HG03681,HG03833,HG01393,400375KA,401894PD,HG01396,HG03279,401459HF,HG03803,NA18552,SW_1428,NA06989,SW_0119,HG01456,SW_0058,401735LE,HG01518,HG01066,HG01064,SW_0187,NA19070,HG01308,401274PA,401589HP,NA20846,NA20847,NA20849,401102RD,400502GS,400248JO,401664SD,NA20362,RW_0560,HG00282,HG00284,HG02154,HG01603,NA18957,HG02601,SW_1120,401540GM,400458LS,SW_1483,NA19328,401096SL,HG02128,400191MP,NA12740,HG04229,HG04227,HG01111,HG03646,RW_0057,HG03899,NA19740,400076LC,sample_nssv708620,HG02330,NA12144,HG02239,HG03800,HG01182,HG03967,HG01188,NA20581,HG00259,SW_1262,SW_0648,HG03117,HG04131,400821FE,401438HT,HG00121,401353BC,NA20127,NA20539,400739SS,NA20753,NA21116,NA20832,NA18994,401979TB,HG03745,HG00637,401117GM,401067BD,400108BJ,NA12843,401841OB,NA11920,HG02165,HG02282,NA20902,HG01840,400930MK,HG01790,401592NR,HG01798,SW_1289,NA19443,HG01593,HG03246,NA19707,401113MJ,HG03455,HG03692,401250WD,HG03696,HG04211,NA18645,NA18647,HG03517,NA19207,NA19204,NA19205,NA19200,NA19208,HG00557,SW_0120,HG03097,HG03099,SW_1436,NA19384,HG01936,HG04173,HG04176,400155CW,HG02309,HG01277,HG01500,HG01501,SW_1459,HG03858,HG02851,SW_0198,HG03856,400494ML,HG01375,HG01374,401395OP,400199SA,NA20877,NA20876,HG00174,SW_0639,SW_1335,HG03781,HG00178,HG01431,NA20785,HG04107,SW_0061,401612HB,400439IM,HG01801,401958MF,NA18940,SW_1156,RW_0119,400758KP,HG01757,HG04195,RW_0529,RW_0523,NA18635,402042BJ,HG00382,NA20896,NA20895,NA18934,NA20892,HG00452,HG00596,401444LD,NA19081,RW_0062,HG00693,HG02976,HG01974,HG03198,400094RS,NA11892,400376SJ,HG00365,402009WP,HG03352,HG03351,HG02952,HG03428,HG03812,HG00253,HG00250,400249BC,HG02223,HG00310,HG00258,SW_1372,401460LW,HG03103,HG00139,SW_0072,NA12718,HG02355,HG02351,HG04026,HG01248,NA18504,HG01242,NA20505,400203NA,NA12828,HG02134,NA07056,NA10835,400383HL,NA20340,HG04099,RW_0646,HG01852,401005BL,400213DB,HG02073,401595BL,HG01784,401858TP,NA18976,NA21102,SW_0060,400800MW,NA21109,HG03258,NA19654,NA19309,NA19717,HG02700,401956DQ,NA21088,401111LH,400227MM,NA12762,NA18538,NA18537,SW_1404,401491BB,400833BB,HG04063,HG01531,HG01530,HG01927,HG03224,RW_0324,HG02490,HG03388,400294HD,NA12003,NA12006,401268PS,NA20544,HG01281,HG01047,HG01048,NA18620,SW_1243,400070PC,SW_0144,SW_1083,HG01403,RW_0359,HG03485,NA21135,400041LJ,SW_1149,NA20815,SW_1147,SW_1396,NA19430,HG00610,RW_0510,RW_0512,NA20851,400177CG,NA20804,402008MC,HG01868,HG01139,NA19391,HG02558,RW_0075,RW_0179,HG00257,SW_0760,HG03945,NA18582,HG00362,HG03823,NA19346,HG03752,400156WT,SW_0086,400178RH,HG00531,NA18565,NA18596,SW_1366,400083TG,NA10839,HG01441,HG01912,SW_0062,NA20516,NA20512,401465TB,HG04015,NA20518,HG01311,SW_1448,HG02938,401860TJ,401734PG,SW_1189,401636WR,HG01709,HG00656,HG03765,HG01702,HG02501,HG02502,400793BR,HG00155,400501SJ,RW_0221,SW_1086,HG02060,401414CR,NA19145,NA19144,HG02143,HG01676,SW_0589,NA12889,HG01170,HG01173,SW_0805,HG01889,400920MK,401386WA,400641WJ,NA21094,400319HT,NA21097,NA21090,HG03470,NA19792,NA12751,NA12750,400343BD,SW_0200,HG00479,HG01122,HG01685,NA18523,401490TL,401773AM,HG00581,HG01524,HG01354,HG00336,HG00331,400712GC,NA18638,HG01191,HG01190,HG03976,NA18631,NA18632,HG02433,HG01551,401855RE,RW_0341,SW_1414,NA20528,HG02026,SW_1139,NA20808,NA20809,HG01632,HG01630,400231LP,NA20803,HG03052,NA12248,401526WB,HG03757,RW_0663,401036WS,SW_0831,HG03634,HG02057,401087SF,HG02053,HG02728,NA18852,NA18854,401847RK;num_samples_tested=6256;frequency=6.54%;num_unique_samples_tested=6077;nr_frequency=6.73%;PopulationSummary=European 192:Asian 83:Mexican 5:African 74:Admixed 4:MiddleEast 0:NativeAmerican 18:NorthAmerican 8:SouthAmerican 25:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1385211	1385211	.	.	.	ID=gssv42;Name=gssv42;variant_type=CNV;variant_sub_type=Loss;outer_start=1385211;inner_start=1397726;inner_end=1445361;outer_end=1453590;inner_rank=13;num_variants=16;variants=essv9769977,essv9771088,nssv708589,nssv708588,nssv708595,nssv708594,essv9766644,essv9767755,essv9768866,essv9811087,essv9822198,essv9833309,essv9835598,essv9836709,essv9772199,essv9777755;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=16;samples=400834SS,401958MF,400618GC,401026AM,401804FG,400091BS,401380OL,400364SS,400695PH,402016HZ,sample_nssv708588,sample_nssv708589,402001SR,401438HT,sample_nssv708595,sample_nssv708594;num_samples_tested=2373;frequency=0.67%;num_unique_samples_tested=2373;nr_frequency=0.67%;PopulationSummary=European 15:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1397726	1445361	.	.	.	ID=gssv42;Name=gssv42;variant_type=CNV;variant_sub_type=Loss;outer_start=1385211;inner_start=1397726;inner_end=1445361;outer_end=1453590;inner_rank=13;num_variants=16;variants=essv9769977,essv9771088,nssv708589,nssv708588,nssv708595,nssv708594,essv9766644,essv9767755,essv9768866,essv9811087,essv9822198,essv9833309,essv9835598,essv9836709,essv9772199,essv9777755;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=16;samples=400834SS,401958MF,400618GC,401026AM,401804FG,400091BS,401380OL,400364SS,400695PH,402016HZ,sample_nssv708588,sample_nssv708589,402001SR,401438HT,sample_nssv708595,sample_nssv708594;num_samples_tested=2373;frequency=0.67%;num_unique_samples_tested=2373;nr_frequency=0.67%;PopulationSummary=European 15:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1453590	1453590	.	.	.	ID=gssv42;Name=gssv42;variant_type=CNV;variant_sub_type=Loss;outer_start=1385211;inner_start=1397726;inner_end=1445361;outer_end=1453590;inner_rank=13;num_variants=16;variants=essv9769977,essv9771088,nssv708589,nssv708588,nssv708595,nssv708594,essv9766644,essv9767755,essv9768866,essv9811087,essv9822198,essv9833309,essv9835598,essv9836709,essv9772199,essv9777755;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=16;samples=400834SS,401958MF,400618GC,401026AM,401804FG,400091BS,401380OL,400364SS,400695PH,402016HZ,sample_nssv708588,sample_nssv708589,402001SR,401438HT,sample_nssv708595,sample_nssv708594;num_samples_tested=2373;frequency=0.67%;num_unique_samples_tested=2373;nr_frequency=0.67%;PopulationSummary=European 15:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	712111	712111	.	.	.	ID=gssv45;Name=gssv45;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=712111;inner_start=713039;inner_end=756009;outer_end=764840;inner_rank=8;num_variants=206;variants=nssv24610,essv9839037,essv9839038,essv9839039,essv9839040,essv9839041,essv9839042,essv9839043,essv9839044,essv9839045,essv9839046,essv9839047,essv9839048,essv9839049,essv9839050,essv9839051,essv9839052,essv9839053,essv9839054,essv9839055,essv9839056,essv9839057,essv9839058,essv9839059,essv9839060,essv9839061,essv9839062,essv9839063,essv9839064,essv9839065,essv9839066,essv9839067,essv9839068,essv9839069,essv9839070,essv9839071,essv9839072,essv9839073,essv9839074,essv9839075,essv9839076,essv9839077,essv9839078,essv9839079,essv9839080,essv9839081,essv9839082,essv9839083,essv9839084,essv9839085,essv9839086,essv9839087,essv9839088,essv9839089,essv9839090,essv9839091,essv9839092,essv9839093,essv9839094,essv9839095,essv9839096,essv9839097,essv9839098,essv9839099,essv9839100,essv9839101,essv9839102,essv9839103,essv9839104,essv9839105,essv9839106,essv9839107,essv9839108,essv9839109,essv9839110,essv9839111,essv9839112,essv9839113,essv9839114,essv9839115,essv9839116,essv9839117,essv9839118,essv9839119,essv9839120,essv9839121,essv9839122,essv9839123,essv9839124,essv9839125,essv9839126,essv9839127,essv9839128,essv9839129,essv9839130,essv9839131,essv9839132,essv9839133,essv9839134,essv9839135,essv9839136,essv9839137,essv9839138,essv9839139,essv9839140,essv9839141,essv9839142,essv9839143,essv9839144,essv9839145,essv9839146,essv9839147,essv9839148,essv9839149,essv9839150,essv9839151,essv9839152,essv9839153,essv9839154,essv9839155,essv9839156,essv9839157,essv9839158,essv9839159,essv9839160,essv9839161,essv9839162,essv9839163,essv9839164,essv9839165,essv9839166,essv9839167,essv9839168,essv9839169,essv9839170,essv9839171,essv9839172,essv9839173,essv9839174,essv9839175,essv9839176,essv9839177,essv9839178,essv9839179,essv9839180,essv9839181,essv9839182,essv9839183,essv9839184,essv9839185,essv9839186,essv9839187,essv9839188,essv9839189,essv9839190,essv9839191,essv9839192,essv9839193,essv9839194,essv9839195,essv9839196,essv9839197,essv9839198,essv9839199,essv9839200,essv9839201,essv9839202,essv9839203,essv9839204,essv9839205,essv9839206,essv9839207,essv9839208,essv9839209,essv9839210,essv9839211,essv9839212,essv9839213,essv9839214,essv9839215,essv9839216,essv9839217,essv9839218,essv9839219,essv9839220,essv9839221,essv9839222,essv9839223,essv9839224,essv9839225,essv9839226,essv9839227,essv9839228,essv9839229,essv9839230,essv9839231,essv9839232,essv9839233,essv9839234,essv9839235,essv9839236,essv9839237,essv9839238,essv9839239,essv9839240,essv9839241;num_studies=2;studies=Perry2008,1000GenomesPhase3;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,ADM2;num_samples=205;samples=NA18564,NA20761,NA18567,NA19006,NA20766,NA07357,NA18989,NA20291,HG01444,HG02734,HG00867,NA18947,HG00620,HG01092,HG01840,HG00273,NA20534,HG00277,HG00148,HG01390,HG02442,HG01565,HG01798,HG01259,HG04094,HG00543,HG01857,NA18553,NA18557,HG01986,NA20858,HG03240,HG02079,HG00344,HG02477,HG01709,NA18916,HG03611,HG03615,HG01669,HG01784,HG03695,HG03511,HG01512,HG03515,HG02373,HG02623,NA19070,NA19200,NA18972,NA20359,HG03844,NA12777,HG00557,HG02383,NA21119,HG02384,NA19712,NA11918,NA18976,NA07056,HG00355,HG02512,NA18573,NA21101,NA21089,NA18572,NA19782,HG03015,HG03718,HG00766,HG03858,NA19375,HG02392,HG02017,HG02398,HG00513,HG03687,NA18535,NA21094,NA18951,HG02768,NA11995,HG00675,NA19792,NA21141,HG03870,NA19079,HG01438,HG02562,HG02419,HG03905,HG04185,HG01682,HG03862,HG01365,HG00475,NA18620,NA19031,HG01958,HG01880,NA18990,HG03234,HG00663,HG02775,HG03731,HG03733,HG04159,HG02401,HG01119,HG02577,HG01359,HG03401,HG00740,HG03484,NA18639,NA20792,HG02878,HG00181,HG00463,NA19083,HG03899,NA19025,NA19449,NA19749,HG01746,HG01747,HG02334,NA18635,HG01626,NA20812,NA20811,NA12750,HG00457,HG03774,NA20892,HG03805,HG00306,HG00614,HG01413,HG00593,HG01028,HG00692,NA20346,HG00690,NA21143,NA20524,NA21144,NA20520,HG02028,HG01971,NA21124,NA21125,HG03196,HG02724,NA20808,HG02561,HG01868,HG01867,HG01865,NA20806,HG02181,NA20885,HG00255,HG00446,HG02220,HG02223,NA20889,NA12872,NA12873,NA20539,HG02813,HG02798,NA20859,NA20532,HG02116,HG02952,HG03189,HG02299,HG02113,NA18571,HG02111,NA21111,HG03812,NA19904,HG04141,HG01088,HG00133,HG00131,HG01871,HG00879,HG03343,HG01571,HG03944,NA20278,HG04029,HG02353,HG00362,HG03826,HG01384,HG02808,NA20332,NA20505,NA20507,HG02807;num_samples_tested=2534;frequency=8.09%;num_unique_samples_tested=2514;nr_frequency=8.15%;PopulationSummary=European 43:Asian 88:Mexican 3:African 40:Admixed 0:MiddleEast 0:NativeAmerican 15:NorthAmerican 3:SouthAmerican 13:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	713039	756009	.	.	.	ID=gssv45;Name=gssv45;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=712111;inner_start=713039;inner_end=756009;outer_end=764840;inner_rank=8;num_variants=206;variants=nssv24610,essv9839037,essv9839038,essv9839039,essv9839040,essv9839041,essv9839042,essv9839043,essv9839044,essv9839045,essv9839046,essv9839047,essv9839048,essv9839049,essv9839050,essv9839051,essv9839052,essv9839053,essv9839054,essv9839055,essv9839056,essv9839057,essv9839058,essv9839059,essv9839060,essv9839061,essv9839062,essv9839063,essv9839064,essv9839065,essv9839066,essv9839067,essv9839068,essv9839069,essv9839070,essv9839071,essv9839072,essv9839073,essv9839074,essv9839075,essv9839076,essv9839077,essv9839078,essv9839079,essv9839080,essv9839081,essv9839082,essv9839083,essv9839084,essv9839085,essv9839086,essv9839087,essv9839088,essv9839089,essv9839090,essv9839091,essv9839092,essv9839093,essv9839094,essv9839095,essv9839096,essv9839097,essv9839098,essv9839099,essv9839100,essv9839101,essv9839102,essv9839103,essv9839104,essv9839105,essv9839106,essv9839107,essv9839108,essv9839109,essv9839110,essv9839111,essv9839112,essv9839113,essv9839114,essv9839115,essv9839116,essv9839117,essv9839118,essv9839119,essv9839120,essv9839121,essv9839122,essv9839123,essv9839124,essv9839125,essv9839126,essv9839127,essv9839128,essv9839129,essv9839130,essv9839131,essv9839132,essv9839133,essv9839134,essv9839135,essv9839136,essv9839137,essv9839138,essv9839139,essv9839140,essv9839141,essv9839142,essv9839143,essv9839144,essv9839145,essv9839146,essv9839147,essv9839148,essv9839149,essv9839150,essv9839151,essv9839152,essv9839153,essv9839154,essv9839155,essv9839156,essv9839157,essv9839158,essv9839159,essv9839160,essv9839161,essv9839162,essv9839163,essv9839164,essv9839165,essv9839166,essv9839167,essv9839168,essv9839169,essv9839170,essv9839171,essv9839172,essv9839173,essv9839174,essv9839175,essv9839176,essv9839177,essv9839178,essv9839179,essv9839180,essv9839181,essv9839182,essv9839183,essv9839184,essv9839185,essv9839186,essv9839187,essv9839188,essv9839189,essv9839190,essv9839191,essv9839192,essv9839193,essv9839194,essv9839195,essv9839196,essv9839197,essv9839198,essv9839199,essv9839200,essv9839201,essv9839202,essv9839203,essv9839204,essv9839205,essv9839206,essv9839207,essv9839208,essv9839209,essv9839210,essv9839211,essv9839212,essv9839213,essv9839214,essv9839215,essv9839216,essv9839217,essv9839218,essv9839219,essv9839220,essv9839221,essv9839222,essv9839223,essv9839224,essv9839225,essv9839226,essv9839227,essv9839228,essv9839229,essv9839230,essv9839231,essv9839232,essv9839233,essv9839234,essv9839235,essv9839236,essv9839237,essv9839238,essv9839239,essv9839240,essv9839241;num_studies=2;studies=Perry2008,1000GenomesPhase3;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,ADM2;num_samples=205;samples=NA18564,NA20761,NA18567,NA19006,NA20766,NA07357,NA18989,NA20291,HG01444,HG02734,HG00867,NA18947,HG00620,HG01092,HG01840,HG00273,NA20534,HG00277,HG00148,HG01390,HG02442,HG01565,HG01798,HG01259,HG04094,HG00543,HG01857,NA18553,NA18557,HG01986,NA20858,HG03240,HG02079,HG00344,HG02477,HG01709,NA18916,HG03611,HG03615,HG01669,HG01784,HG03695,HG03511,HG01512,HG03515,HG02373,HG02623,NA19070,NA19200,NA18972,NA20359,HG03844,NA12777,HG00557,HG02383,NA21119,HG02384,NA19712,NA11918,NA18976,NA07056,HG00355,HG02512,NA18573,NA21101,NA21089,NA18572,NA19782,HG03015,HG03718,HG00766,HG03858,NA19375,HG02392,HG02017,HG02398,HG00513,HG03687,NA18535,NA21094,NA18951,HG02768,NA11995,HG00675,NA19792,NA21141,HG03870,NA19079,HG01438,HG02562,HG02419,HG03905,HG04185,HG01682,HG03862,HG01365,HG00475,NA18620,NA19031,HG01958,HG01880,NA18990,HG03234,HG00663,HG02775,HG03731,HG03733,HG04159,HG02401,HG01119,HG02577,HG01359,HG03401,HG00740,HG03484,NA18639,NA20792,HG02878,HG00181,HG00463,NA19083,HG03899,NA19025,NA19449,NA19749,HG01746,HG01747,HG02334,NA18635,HG01626,NA20812,NA20811,NA12750,HG00457,HG03774,NA20892,HG03805,HG00306,HG00614,HG01413,HG00593,HG01028,HG00692,NA20346,HG00690,NA21143,NA20524,NA21144,NA20520,HG02028,HG01971,NA21124,NA21125,HG03196,HG02724,NA20808,HG02561,HG01868,HG01867,HG01865,NA20806,HG02181,NA20885,HG00255,HG00446,HG02220,HG02223,NA20889,NA12872,NA12873,NA20539,HG02813,HG02798,NA20859,NA20532,HG02116,HG02952,HG03189,HG02299,HG02113,NA18571,HG02111,NA21111,HG03812,NA19904,HG04141,HG01088,HG00133,HG00131,HG01871,HG00879,HG03343,HG01571,HG03944,NA20278,HG04029,HG02353,HG00362,HG03826,HG01384,HG02808,NA20332,NA20505,NA20507,HG02807;num_samples_tested=2534;frequency=8.09%;num_unique_samples_tested=2514;nr_frequency=8.15%;PopulationSummary=European 43:Asian 88:Mexican 3:African 40:Admixed 0:MiddleEast 0:NativeAmerican 15:NorthAmerican 3:SouthAmerican 13:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	764840	764840	.	.	.	ID=gssv45;Name=gssv45;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=712111;inner_start=713039;inner_end=756009;outer_end=764840;inner_rank=8;num_variants=206;variants=nssv24610,essv9839037,essv9839038,essv9839039,essv9839040,essv9839041,essv9839042,essv9839043,essv9839044,essv9839045,essv9839046,essv9839047,essv9839048,essv9839049,essv9839050,essv9839051,essv9839052,essv9839053,essv9839054,essv9839055,essv9839056,essv9839057,essv9839058,essv9839059,essv9839060,essv9839061,essv9839062,essv9839063,essv9839064,essv9839065,essv9839066,essv9839067,essv9839068,essv9839069,essv9839070,essv9839071,essv9839072,essv9839073,essv9839074,essv9839075,essv9839076,essv9839077,essv9839078,essv9839079,essv9839080,essv9839081,essv9839082,essv9839083,essv9839084,essv9839085,essv9839086,essv9839087,essv9839088,essv9839089,essv9839090,essv9839091,essv9839092,essv9839093,essv9839094,essv9839095,essv9839096,essv9839097,essv9839098,essv9839099,essv9839100,essv9839101,essv9839102,essv9839103,essv9839104,essv9839105,essv9839106,essv9839107,essv9839108,essv9839109,essv9839110,essv9839111,essv9839112,essv9839113,essv9839114,essv9839115,essv9839116,essv9839117,essv9839118,essv9839119,essv9839120,essv9839121,essv9839122,essv9839123,essv9839124,essv9839125,essv9839126,essv9839127,essv9839128,essv9839129,essv9839130,essv9839131,essv9839132,essv9839133,essv9839134,essv9839135,essv9839136,essv9839137,essv9839138,essv9839139,essv9839140,essv9839141,essv9839142,essv9839143,essv9839144,essv9839145,essv9839146,essv9839147,essv9839148,essv9839149,essv9839150,essv9839151,essv9839152,essv9839153,essv9839154,essv9839155,essv9839156,essv9839157,essv9839158,essv9839159,essv9839160,essv9839161,essv9839162,essv9839163,essv9839164,essv9839165,essv9839166,essv9839167,essv9839168,essv9839169,essv9839170,essv9839171,essv9839172,essv9839173,essv9839174,essv9839175,essv9839176,essv9839177,essv9839178,essv9839179,essv9839180,essv9839181,essv9839182,essv9839183,essv9839184,essv9839185,essv9839186,essv9839187,essv9839188,essv9839189,essv9839190,essv9839191,essv9839192,essv9839193,essv9839194,essv9839195,essv9839196,essv9839197,essv9839198,essv9839199,essv9839200,essv9839201,essv9839202,essv9839203,essv9839204,essv9839205,essv9839206,essv9839207,essv9839208,essv9839209,essv9839210,essv9839211,essv9839212,essv9839213,essv9839214,essv9839215,essv9839216,essv9839217,essv9839218,essv9839219,essv9839220,essv9839221,essv9839222,essv9839223,essv9839224,essv9839225,essv9839226,essv9839227,essv9839228,essv9839229,essv9839230,essv9839231,essv9839232,essv9839233,essv9839234,essv9839235,essv9839236,essv9839237,essv9839238,essv9839239,essv9839240,essv9839241;num_studies=2;studies=Perry2008,1000GenomesPhase3;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,ADM2;num_samples=205;samples=NA18564,NA20761,NA18567,NA19006,NA20766,NA07357,NA18989,NA20291,HG01444,HG02734,HG00867,NA18947,HG00620,HG01092,HG01840,HG00273,NA20534,HG00277,HG00148,HG01390,HG02442,HG01565,HG01798,HG01259,HG04094,HG00543,HG01857,NA18553,NA18557,HG01986,NA20858,HG03240,HG02079,HG00344,HG02477,HG01709,NA18916,HG03611,HG03615,HG01669,HG01784,HG03695,HG03511,HG01512,HG03515,HG02373,HG02623,NA19070,NA19200,NA18972,NA20359,HG03844,NA12777,HG00557,HG02383,NA21119,HG02384,NA19712,NA11918,NA18976,NA07056,HG00355,HG02512,NA18573,NA21101,NA21089,NA18572,NA19782,HG03015,HG03718,HG00766,HG03858,NA19375,HG02392,HG02017,HG02398,HG00513,HG03687,NA18535,NA21094,NA18951,HG02768,NA11995,HG00675,NA19792,NA21141,HG03870,NA19079,HG01438,HG02562,HG02419,HG03905,HG04185,HG01682,HG03862,HG01365,HG00475,NA18620,NA19031,HG01958,HG01880,NA18990,HG03234,HG00663,HG02775,HG03731,HG03733,HG04159,HG02401,HG01119,HG02577,HG01359,HG03401,HG00740,HG03484,NA18639,NA20792,HG02878,HG00181,HG00463,NA19083,HG03899,NA19025,NA19449,NA19749,HG01746,HG01747,HG02334,NA18635,HG01626,NA20812,NA20811,NA12750,HG00457,HG03774,NA20892,HG03805,HG00306,HG00614,HG01413,HG00593,HG01028,HG00692,NA20346,HG00690,NA21143,NA20524,NA21144,NA20520,HG02028,HG01971,NA21124,NA21125,HG03196,HG02724,NA20808,HG02561,HG01868,HG01867,HG01865,NA20806,HG02181,NA20885,HG00255,HG00446,HG02220,HG02223,NA20889,NA12872,NA12873,NA20539,HG02813,HG02798,NA20859,NA20532,HG02116,HG02952,HG03189,HG02299,HG02113,NA18571,HG02111,NA21111,HG03812,NA19904,HG04141,HG01088,HG00133,HG00131,HG01871,HG00879,HG03343,HG01571,HG03944,NA20278,HG04029,HG02353,HG00362,HG03826,HG01384,HG02808,NA20332,NA20505,NA20507,HG02807;num_samples_tested=2534;frequency=8.09%;num_unique_samples_tested=2514;nr_frequency=8.15%;PopulationSummary=European 43:Asian 88:Mexican 3:African 40:Admixed 0:MiddleEast 0:NativeAmerican 15:NorthAmerican 3:SouthAmerican 13:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	121042	121042	.	.	.	ID=gssv46;Name=gssv46;variant_type=CNV;variant_sub_type=Gain;outer_start=121042;inner_start=125400;inner_end=176984;outer_end=176984;inner_rank=8;num_variants=11;variants=nssv1751889,nssv1751890,nssv1751891,nssv1751892,nssv1751893,nssv1751894,nssv1751895,nssv1751896,nssv1751897,nssv1751900,nssv707623;num_studies=2;studies=Sudmant2013,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,Custom_HMM;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,sample_nssv707623,HGDP00521,HGDP00998;num_samples_tested=1510;frequency=0.73%;num_unique_samples_tested=1510;nr_frequency=0.72%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	125400	176984	.	.	.	ID=gssv46;Name=gssv46;variant_type=CNV;variant_sub_type=Gain;outer_start=121042;inner_start=125400;inner_end=176984;outer_end=176984;inner_rank=8;num_variants=11;variants=nssv1751889,nssv1751890,nssv1751891,nssv1751892,nssv1751893,nssv1751894,nssv1751895,nssv1751896,nssv1751897,nssv1751900,nssv707623;num_studies=2;studies=Sudmant2013,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,Custom_HMM;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,sample_nssv707623,HGDP00521,HGDP00998;num_samples_tested=1510;frequency=0.73%;num_unique_samples_tested=1510;nr_frequency=0.72%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	176984	176984	.	.	.	ID=gssv46;Name=gssv46;variant_type=CNV;variant_sub_type=Gain;outer_start=121042;inner_start=125400;inner_end=176984;outer_end=176984;inner_rank=8;num_variants=11;variants=nssv1751889,nssv1751890,nssv1751891,nssv1751892,nssv1751893,nssv1751894,nssv1751895,nssv1751896,nssv1751897,nssv1751900,nssv707623;num_studies=2;studies=Sudmant2013,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,Custom_HMM;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,sample_nssv707623,HGDP00521,HGDP00998;num_samples_tested=1510;frequency=0.73%;num_unique_samples_tested=1510;nr_frequency=0.72%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1635000	1635000	.	.	.	ID=gssv54;Name=gssv54;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1635000;inner_start=1635000;inner_end=1680585;outer_end=1687674;inner_rank=10;num_variants=5;variants=nssv1439447,essv9768200,nssv708628,essv9768311,nssv708632;num_studies=3;studies=Uddin2014,Park2010,Cooper2011;num_platforms=3;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=ChAS,Custom_HMM,ADM2;num_samples=5;samples=401820SD,400785AK,NA18537,sample_nssv708632,sample_nssv708628;num_samples_tested=2403;frequency=0.21%;num_unique_samples_tested=2403;nr_frequency=0.2%;PopulationSummary=European 3:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1635000	1680585	.	.	.	ID=gssv54;Name=gssv54;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1635000;inner_start=1635000;inner_end=1680585;outer_end=1687674;inner_rank=10;num_variants=5;variants=nssv1439447,essv9768200,nssv708628,essv9768311,nssv708632;num_studies=3;studies=Uddin2014,Park2010,Cooper2011;num_platforms=3;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=ChAS,Custom_HMM,ADM2;num_samples=5;samples=401820SD,400785AK,NA18537,sample_nssv708632,sample_nssv708628;num_samples_tested=2403;frequency=0.21%;num_unique_samples_tested=2403;nr_frequency=0.2%;PopulationSummary=European 3:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1687674	1687674	.	.	.	ID=gssv54;Name=gssv54;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1635000;inner_start=1635000;inner_end=1680585;outer_end=1687674;inner_rank=10;num_variants=5;variants=nssv1439447,essv9768200,nssv708628,essv9768311,nssv708632;num_studies=3;studies=Uddin2014,Park2010,Cooper2011;num_platforms=3;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=ChAS,Custom_HMM,ADM2;num_samples=5;samples=401820SD,400785AK,NA18537,sample_nssv708632,sample_nssv708628;num_samples_tested=2403;frequency=0.21%;num_unique_samples_tested=2403;nr_frequency=0.2%;PopulationSummary=European 3:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1619541	1619541	.	.	.	ID=gssv55;Name=gssv55;variant_type=CNV;variant_sub_type=Loss;outer_start=1619541;inner_start=1619541;inner_end=1664124;outer_end=1669156;inner_rank=14;num_variants=6;variants=nssv708615,nssv708616,essv7004884,essv7004885,essv7010743,essv7004883;num_studies=2;studies=Vogler2010,Cooper2011;num_platforms=2;platforms=Affymetrix6.0,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=6;samples=RW_0186,sample_nssv708616,sample_nssv708615,RW_0645,RW_0662,SW_1455;num_samples_tested=2609;frequency=0.23%;num_unique_samples_tested=2609;nr_frequency=0.22%;PopulationSummary=European 3:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1619541	1664124	.	.	.	ID=gssv55;Name=gssv55;variant_type=CNV;variant_sub_type=Loss;outer_start=1619541;inner_start=1619541;inner_end=1664124;outer_end=1669156;inner_rank=14;num_variants=6;variants=nssv708615,nssv708616,essv7004884,essv7004885,essv7010743,essv7004883;num_studies=2;studies=Vogler2010,Cooper2011;num_platforms=2;platforms=Affymetrix6.0,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=6;samples=RW_0186,sample_nssv708616,sample_nssv708615,RW_0645,RW_0662,SW_1455;num_samples_tested=2609;frequency=0.23%;num_unique_samples_tested=2609;nr_frequency=0.22%;PopulationSummary=European 3:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1669156	1669156	.	.	.	ID=gssv55;Name=gssv55;variant_type=CNV;variant_sub_type=Loss;outer_start=1619541;inner_start=1619541;inner_end=1664124;outer_end=1669156;inner_rank=14;num_variants=6;variants=nssv708615,nssv708616,essv7004884,essv7004885,essv7010743,essv7004883;num_studies=2;studies=Vogler2010,Cooper2011;num_platforms=2;platforms=Affymetrix6.0,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=6;samples=RW_0186,sample_nssv708616,sample_nssv708615,RW_0645,RW_0662,SW_1455;num_samples_tested=2609;frequency=0.23%;num_unique_samples_tested=2609;nr_frequency=0.22%;PopulationSummary=European 3:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	37889	37889	.	.	.	ID=gssv57;Name=gssv57;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=37889;inner_start=37889;inner_end=82189;outer_end=82189;inner_rank=12;num_variants=5;variants=nssv14766,nssv14775,nssv14791,nssv707616,nssv707617;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=5;samples=sample_nssv707617,sample_nssv707616,NA19240,NA18537,NA10863;num_samples_tested=1530;frequency=0.33%;num_unique_samples_tested=1530;nr_frequency=0.32%;PopulationSummary=European 3:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	37889	82189	.	.	.	ID=gssv57;Name=gssv57;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=37889;inner_start=37889;inner_end=82189;outer_end=82189;inner_rank=12;num_variants=5;variants=nssv14766,nssv14775,nssv14791,nssv707616,nssv707617;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=5;samples=sample_nssv707617,sample_nssv707616,NA19240,NA18537,NA10863;num_samples_tested=1530;frequency=0.33%;num_unique_samples_tested=1530;nr_frequency=0.32%;PopulationSummary=European 3:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	82189	82189	.	.	.	ID=gssv57;Name=gssv57;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=37889;inner_start=37889;inner_end=82189;outer_end=82189;inner_rank=12;num_variants=5;variants=nssv14766,nssv14775,nssv14791,nssv707616,nssv707617;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=5;samples=sample_nssv707617,sample_nssv707616,NA19240,NA18537,NA10863;num_samples_tested=1530;frequency=0.33%;num_unique_samples_tested=1530;nr_frequency=0.32%;PopulationSummary=European 3:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	521413	521413	.	.	.	ID=gssv59;Name=gssv59;variant_type=CNV;variant_sub_type=Loss;outer_start=521413;inner_start=522207;inner_end=564473;outer_end=564582;inner_rank=7;num_variants=10;variants=essv58239,essv57440,essv75601,nssv21426,essv79491,essv39460,essv36813,essv51804,essv56439,essv81202;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=10;samples=NA11894,NA12414,NA12006,NA12749,NA10863,NA11993,NA19108,NA12287,NA12776,NA19114;num_samples_tested=70;frequency=14.29%;num_unique_samples_tested=67;nr_frequency=14.92%;PopulationSummary=European 8:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	522207	564473	.	.	.	ID=gssv59;Name=gssv59;variant_type=CNV;variant_sub_type=Loss;outer_start=521413;inner_start=522207;inner_end=564473;outer_end=564582;inner_rank=7;num_variants=10;variants=essv58239,essv57440,essv75601,nssv21426,essv79491,essv39460,essv36813,essv51804,essv56439,essv81202;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=10;samples=NA11894,NA12414,NA12006,NA12749,NA10863,NA11993,NA19108,NA12287,NA12776,NA19114;num_samples_tested=70;frequency=14.29%;num_unique_samples_tested=67;nr_frequency=14.92%;PopulationSummary=European 8:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	564582	564582	.	.	.	ID=gssv59;Name=gssv59;variant_type=CNV;variant_sub_type=Loss;outer_start=521413;inner_start=522207;inner_end=564473;outer_end=564582;inner_rank=7;num_variants=10;variants=essv58239,essv57440,essv75601,nssv21426,essv79491,essv39460,essv36813,essv51804,essv56439,essv81202;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=10;samples=NA11894,NA12414,NA12006,NA12749,NA10863,NA11993,NA19108,NA12287,NA12776,NA19114;num_samples_tested=70;frequency=14.29%;num_unique_samples_tested=67;nr_frequency=14.92%;PopulationSummary=European 8:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1402894	1402894	.	.	.	ID=gssv60;Name=gssv60;variant_type=CNV;variant_sub_type=Loss;outer_start=1402894;inner_start=1402894;inner_end=1443716;outer_end=1453921;inner_rank=13;num_variants=2;variants=essv9779977,nssv708596;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=2;samples=400818BL,sample_nssv708596;num_samples_tested=2373;frequency=0.08%;num_unique_samples_tested=2373;nr_frequency=0.08%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1402894	1443716	.	.	.	ID=gssv60;Name=gssv60;variant_type=CNV;variant_sub_type=Loss;outer_start=1402894;inner_start=1402894;inner_end=1443716;outer_end=1453921;inner_rank=13;num_variants=2;variants=essv9779977,nssv708596;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=2;samples=400818BL,sample_nssv708596;num_samples_tested=2373;frequency=0.08%;num_unique_samples_tested=2373;nr_frequency=0.08%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1453921	1453921	.	.	.	ID=gssv60;Name=gssv60;variant_type=CNV;variant_sub_type=Loss;outer_start=1402894;inner_start=1402894;inner_end=1443716;outer_end=1453921;inner_rank=13;num_variants=2;variants=essv9779977,nssv708596;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=2;samples=400818BL,sample_nssv708596;num_samples_tested=2373;frequency=0.08%;num_unique_samples_tested=2373;nr_frequency=0.08%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	227601	227601	.	.	.	ID=gssv61;Name=gssv61;variant_type=CNV;variant_sub_type=Gain;outer_start=227601;inner_start=238341;inner_end=267671;outer_end=267719;inner_rank=8;num_variants=11;variants=nssv3001722,nssv1753699,nssv1753700,nssv1753701,nssv1753702,nssv1753703,nssv1753704,nssv1753705,nssv1753706,nssv1753707,nssv1753708;num_studies=2;studies=Sudmant2013,Dogan2014;num_platforms=1;platforms=Illumina_HiSeq;num_algorithms=1;algorithms=ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,BILGI_BIOE,HGDP00521,HGDP00998;num_samples_tested=11;frequency=100%;num_unique_samples_tested=11;nr_frequency=100%;PopulationSummary=European 2:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	238341	267671	.	.	.	ID=gssv61;Name=gssv61;variant_type=CNV;variant_sub_type=Gain;outer_start=227601;inner_start=238341;inner_end=267671;outer_end=267719;inner_rank=8;num_variants=11;variants=nssv3001722,nssv1753699,nssv1753700,nssv1753701,nssv1753702,nssv1753703,nssv1753704,nssv1753705,nssv1753706,nssv1753707,nssv1753708;num_studies=2;studies=Sudmant2013,Dogan2014;num_platforms=1;platforms=Illumina_HiSeq;num_algorithms=1;algorithms=ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,BILGI_BIOE,HGDP00521,HGDP00998;num_samples_tested=11;frequency=100%;num_unique_samples_tested=11;nr_frequency=100%;PopulationSummary=European 2:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	267719	267719	.	.	.	ID=gssv61;Name=gssv61;variant_type=CNV;variant_sub_type=Gain;outer_start=227601;inner_start=238341;inner_end=267671;outer_end=267719;inner_rank=8;num_variants=11;variants=nssv3001722,nssv1753699,nssv1753700,nssv1753701,nssv1753702,nssv1753703,nssv1753704,nssv1753705,nssv1753706,nssv1753707,nssv1753708;num_studies=2;studies=Sudmant2013,Dogan2014;num_platforms=1;platforms=Illumina_HiSeq;num_algorithms=1;algorithms=ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,BILGI_BIOE,HGDP00521,HGDP00998;num_samples_tested=11;frequency=100%;num_unique_samples_tested=11;nr_frequency=100%;PopulationSummary=European 2:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	1387455	1387455	.	.	.	ID=gssv62;Name=gssv62;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1387455;inner_start=1393241;inner_end=1425836;outer_end=1429151;inner_rank=8;num_variants=109;variants=nssv708590,essv9840724,essv9840725,essv9840726,essv9840727,essv9840728,essv9840729,essv9840730,essv9840731,essv9840732,essv9840733,essv9840734,essv9840735,essv9840736,essv9840737,essv9840738,essv9840739,essv9840740,essv9840741,essv9840742,essv9840743,essv9840744,essv9840745,essv9840746,essv9840747,essv9840748,essv9840749,essv9840750,essv9840751,essv9840752,essv9840753,essv9840754,essv9840755,essv9840756,essv9840757,essv9840758,essv9840759,essv9840760,essv9840761,essv9840762,essv9840763,essv9840764,essv9840765,essv9840766,essv9840767,essv9840768,essv9840769,essv9840770,essv9840771,essv9840772,essv9840773,essv9840774,essv9840775,essv9840776,essv9840777,essv9840778,essv9840779,essv9840780,essv9840781,essv9840782,essv9840783,essv9840784,essv9840785,essv9840786,essv9766643,essv9777754,essv9788865,essv9799976,essv9840684,essv9840685,essv9840686,essv9840687,essv9840688,essv9840689,essv9840690,essv9840691,essv9840692,essv9840693,essv9840694,essv9840695,essv9840696,essv9840697,essv9840698,essv9840699,essv9840700,essv9840701,essv9840702,essv9840703,essv9840704,essv9840705,essv9840706,essv9840707,essv9840708,essv9840709,essv9840710,essv9840711,essv9840712,essv9840713,essv9840714,essv9840715,essv9840716,essv9840717,essv9840718,essv9840719,essv9840720,essv9840721,essv9840722,essv9840723,essv9747312;num_studies=4;studies=Uddin2014,Boomsma2014,Cooper2011,1000GenomesPhase3;num_platforms=4;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=4;algorithms=ChAS,RD+PEM,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=69;samples=HG02382,NA11920,401808PS,HG00620,HG02165,HG03097,NA20314,HG02389,HG00232,NA19189,HG03111,NA12546,HG02465,HG03234,HG03464,HG00109,HG01842,HG01509,HG01631,HG03298,HG02786,HG03640,NA19308,HG03235,HG01757,NA19776,sample_essv9747312,NA18516,400852WJ,HG01694,NA18632,HG02180,NA11918,NA18574,HG03265,HG03693,HG02178,HG02141,NA19171,NA20870,HG02079,HG02648,NA12046,HG01607,HG03433,NA19403,HG01085,sample_nssv708590,HG01815,NA19438,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG01280,HG02521,HG00982,NA12778,400649PS,HG04182,HG00536,NA19383,HG03844,400800MW,NA21108;num_samples_tested=5644;frequency=1.22%;num_unique_samples_tested=5644;nr_frequency=1.22%;PopulationSummary=European 20:Asian 25:Mexican 2:African 16:Admixed 0:MiddleEast 0:NativeAmerican 3:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1393241	1425836	.	.	.	ID=gssv62;Name=gssv62;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1387455;inner_start=1393241;inner_end=1425836;outer_end=1429151;inner_rank=8;num_variants=109;variants=nssv708590,essv9840724,essv9840725,essv9840726,essv9840727,essv9840728,essv9840729,essv9840730,essv9840731,essv9840732,essv9840733,essv9840734,essv9840735,essv9840736,essv9840737,essv9840738,essv9840739,essv9840740,essv9840741,essv9840742,essv9840743,essv9840744,essv9840745,essv9840746,essv9840747,essv9840748,essv9840749,essv9840750,essv9840751,essv9840752,essv9840753,essv9840754,essv9840755,essv9840756,essv9840757,essv9840758,essv9840759,essv9840760,essv9840761,essv9840762,essv9840763,essv9840764,essv9840765,essv9840766,essv9840767,essv9840768,essv9840769,essv9840770,essv9840771,essv9840772,essv9840773,essv9840774,essv9840775,essv9840776,essv9840777,essv9840778,essv9840779,essv9840780,essv9840781,essv9840782,essv9840783,essv9840784,essv9840785,essv9840786,essv9766643,essv9777754,essv9788865,essv9799976,essv9840684,essv9840685,essv9840686,essv9840687,essv9840688,essv9840689,essv9840690,essv9840691,essv9840692,essv9840693,essv9840694,essv9840695,essv9840696,essv9840697,essv9840698,essv9840699,essv9840700,essv9840701,essv9840702,essv9840703,essv9840704,essv9840705,essv9840706,essv9840707,essv9840708,essv9840709,essv9840710,essv9840711,essv9840712,essv9840713,essv9840714,essv9840715,essv9840716,essv9840717,essv9840718,essv9840719,essv9840720,essv9840721,essv9840722,essv9840723,essv9747312;num_studies=4;studies=Uddin2014,Boomsma2014,Cooper2011,1000GenomesPhase3;num_platforms=4;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=4;algorithms=ChAS,RD+PEM,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=69;samples=HG02382,NA11920,401808PS,HG00620,HG02165,HG03097,NA20314,HG02389,HG00232,NA19189,HG03111,NA12546,HG02465,HG03234,HG03464,HG00109,HG01842,HG01509,HG01631,HG03298,HG02786,HG03640,NA19308,HG03235,HG01757,NA19776,sample_essv9747312,NA18516,400852WJ,HG01694,NA18632,HG02180,NA11918,NA18574,HG03265,HG03693,HG02178,HG02141,NA19171,NA20870,HG02079,HG02648,NA12046,HG01607,HG03433,NA19403,HG01085,sample_nssv708590,HG01815,NA19438,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG01280,HG02521,HG00982,NA12778,400649PS,HG04182,HG00536,NA19383,HG03844,400800MW,NA21108;num_samples_tested=5644;frequency=1.22%;num_unique_samples_tested=5644;nr_frequency=1.22%;PopulationSummary=European 20:Asian 25:Mexican 2:African 16:Admixed 0:MiddleEast 0:NativeAmerican 3:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1429151	1429151	.	.	.	ID=gssv62;Name=gssv62;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1387455;inner_start=1393241;inner_end=1425836;outer_end=1429151;inner_rank=8;num_variants=109;variants=nssv708590,essv9840724,essv9840725,essv9840726,essv9840727,essv9840728,essv9840729,essv9840730,essv9840731,essv9840732,essv9840733,essv9840734,essv9840735,essv9840736,essv9840737,essv9840738,essv9840739,essv9840740,essv9840741,essv9840742,essv9840743,essv9840744,essv9840745,essv9840746,essv9840747,essv9840748,essv9840749,essv9840750,essv9840751,essv9840752,essv9840753,essv9840754,essv9840755,essv9840756,essv9840757,essv9840758,essv9840759,essv9840760,essv9840761,essv9840762,essv9840763,essv9840764,essv9840765,essv9840766,essv9840767,essv9840768,essv9840769,essv9840770,essv9840771,essv9840772,essv9840773,essv9840774,essv9840775,essv9840776,essv9840777,essv9840778,essv9840779,essv9840780,essv9840781,essv9840782,essv9840783,essv9840784,essv9840785,essv9840786,essv9766643,essv9777754,essv9788865,essv9799976,essv9840684,essv9840685,essv9840686,essv9840687,essv9840688,essv9840689,essv9840690,essv9840691,essv9840692,essv9840693,essv9840694,essv9840695,essv9840696,essv9840697,essv9840698,essv9840699,essv9840700,essv9840701,essv9840702,essv9840703,essv9840704,essv9840705,essv9840706,essv9840707,essv9840708,essv9840709,essv9840710,essv9840711,essv9840712,essv9840713,essv9840714,essv9840715,essv9840716,essv9840717,essv9840718,essv9840719,essv9840720,essv9840721,essv9840722,essv9840723,essv9747312;num_studies=4;studies=Uddin2014,Boomsma2014,Cooper2011,1000GenomesPhase3;num_platforms=4;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=4;algorithms=ChAS,RD+PEM,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=69;samples=HG02382,NA11920,401808PS,HG00620,HG02165,HG03097,NA20314,HG02389,HG00232,NA19189,HG03111,NA12546,HG02465,HG03234,HG03464,HG00109,HG01842,HG01509,HG01631,HG03298,HG02786,HG03640,NA19308,HG03235,HG01757,NA19776,sample_essv9747312,NA18516,400852WJ,HG01694,NA18632,HG02180,NA11918,NA18574,HG03265,HG03693,HG02178,HG02141,NA19171,NA20870,HG02079,HG02648,NA12046,HG01607,HG03433,NA19403,HG01085,sample_nssv708590,HG01815,NA19438,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG01280,HG02521,HG00982,NA12778,400649PS,HG04182,HG00536,NA19383,HG03844,400800MW,NA21108;num_samples_tested=5644;frequency=1.22%;num_unique_samples_tested=5644;nr_frequency=1.22%;PopulationSummary=European 20:Asian 25:Mexican 2:African 16:Admixed 0:MiddleEast 0:NativeAmerican 3:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1424924	1424924	.	.	.	ID=gssv63;Name=gssv63;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1424924;inner_start=1431691;inner_end=1465277;outer_end=1465586;inner_rank=8;num_variants=11;variants=essv9840821,nssv1750635,nssv1750636,nssv1750637,nssv1750638,nssv1750639,nssv1750641,nssv1750642,nssv1750643,nssv1750644,nssv1750645;num_studies=2;studies=Sudmant2013,1000GenomesPhase3;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,RD+PEM;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HG02648,HGDP00998,HGDP00521;num_samples_tested=2514;frequency=0.44%;num_unique_samples_tested=2514;nr_frequency=0.43%;PopulationSummary=European 2:Asian 3:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1431691	1465277	.	.	.	ID=gssv63;Name=gssv63;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1424924;inner_start=1431691;inner_end=1465277;outer_end=1465586;inner_rank=8;num_variants=11;variants=essv9840821,nssv1750635,nssv1750636,nssv1750637,nssv1750638,nssv1750639,nssv1750641,nssv1750642,nssv1750643,nssv1750644,nssv1750645;num_studies=2;studies=Sudmant2013,1000GenomesPhase3;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,RD+PEM;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HG02648,HGDP00998,HGDP00521;num_samples_tested=2514;frequency=0.44%;num_unique_samples_tested=2514;nr_frequency=0.43%;PopulationSummary=European 2:Asian 3:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1465586	1465586	.	.	.	ID=gssv63;Name=gssv63;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1424924;inner_start=1431691;inner_end=1465277;outer_end=1465586;inner_rank=8;num_variants=11;variants=essv9840821,nssv1750635,nssv1750636,nssv1750637,nssv1750638,nssv1750639,nssv1750641,nssv1750642,nssv1750643,nssv1750644,nssv1750645;num_studies=2;studies=Sudmant2013,1000GenomesPhase3;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,RD+PEM;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HG02648,HGDP00998,HGDP00521;num_samples_tested=2514;frequency=0.44%;num_unique_samples_tested=2514;nr_frequency=0.43%;PopulationSummary=European 2:Asian 3:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1616990	1616990	.	.	.	ID=gssv65;Name=gssv65;variant_type=CNV;variant_sub_type=Loss;outer_start=1616990;inner_start=1616990;inner_end=1652775;outer_end=1653672;inner_rank=13;num_variants=3;variants=essv9784421,nssv708618,nssv708617;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=3;samples=sample_nssv708618,400834SS,sample_nssv708617;num_samples_tested=2373;frequency=0.13%;num_unique_samples_tested=2373;nr_frequency=0.12%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1616990	1652775	.	.	.	ID=gssv65;Name=gssv65;variant_type=CNV;variant_sub_type=Loss;outer_start=1616990;inner_start=1616990;inner_end=1652775;outer_end=1653672;inner_rank=13;num_variants=3;variants=essv9784421,nssv708618,nssv708617;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=3;samples=sample_nssv708618,400834SS,sample_nssv708617;num_samples_tested=2373;frequency=0.13%;num_unique_samples_tested=2373;nr_frequency=0.12%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1653672	1653672	.	.	.	ID=gssv65;Name=gssv65;variant_type=CNV;variant_sub_type=Loss;outer_start=1616990;inner_start=1616990;inner_end=1652775;outer_end=1653672;inner_rank=13;num_variants=3;variants=essv9784421,nssv708618,nssv708617;num_studies=2;studies=Uddin2014,Cooper2011;num_platforms=2;platforms=CytoScanHD_2.7M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=3;samples=sample_nssv708618,400834SS,sample_nssv708617;num_samples_tested=2373;frequency=0.13%;num_unique_samples_tested=2373;nr_frequency=0.12%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1635205	1635205	.	.	.	ID=gssv68;Name=gssv68;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1635205;inner_start=1637305;inner_end=1670625;outer_end=1672603;inner_rank=10;num_variants=19;variants=nssv708625,nssv708626,nssv708627,nssv1422355,essv7004904,essv7004905,essv7004906,essv7004907,essv7029967,essv7030079,essv7030190,essv7030301,essv7030412,essv7030523,essv7030634,nssv708621,nssv708622,nssv708623,nssv708624;num_studies=3;studies=Park2010,Vogler2010,Cooper2011;num_platforms=3;platforms=Affymetrix6.0,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=PennCNV+Birdseye,Custom_HMM,ADM2;num_samples=19;samples=NA18552,SW_1302,sample_nssv708627,sample_nssv708626,sample_nssv708625,sample_nssv708624,RW_0203,sample_nssv708622,sample_nssv708621,SW_0856,RW_0166,sample_nssv708623,SW_0818,RW_0162,SW_1103,SW_0020,SW_0789,RW_0108,SW_0773;num_samples_tested=2639;frequency=0.72%;num_unique_samples_tested=2639;nr_frequency=0.71%;PopulationSummary=European 14:Asian 1:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1637305	1670625	.	.	.	ID=gssv68;Name=gssv68;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1635205;inner_start=1637305;inner_end=1670625;outer_end=1672603;inner_rank=10;num_variants=19;variants=nssv708625,nssv708626,nssv708627,nssv1422355,essv7004904,essv7004905,essv7004906,essv7004907,essv7029967,essv7030079,essv7030190,essv7030301,essv7030412,essv7030523,essv7030634,nssv708621,nssv708622,nssv708623,nssv708624;num_studies=3;studies=Park2010,Vogler2010,Cooper2011;num_platforms=3;platforms=Affymetrix6.0,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=PennCNV+Birdseye,Custom_HMM,ADM2;num_samples=19;samples=NA18552,SW_1302,sample_nssv708627,sample_nssv708626,sample_nssv708625,sample_nssv708624,RW_0203,sample_nssv708622,sample_nssv708621,SW_0856,RW_0166,sample_nssv708623,SW_0818,RW_0162,SW_1103,SW_0020,SW_0789,RW_0108,SW_0773;num_samples_tested=2639;frequency=0.72%;num_unique_samples_tested=2639;nr_frequency=0.71%;PopulationSummary=European 14:Asian 1:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1672603	1672603	.	.	.	ID=gssv68;Name=gssv68;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1635205;inner_start=1637305;inner_end=1670625;outer_end=1672603;inner_rank=10;num_variants=19;variants=nssv708625,nssv708626,nssv708627,nssv1422355,essv7004904,essv7004905,essv7004906,essv7004907,essv7029967,essv7030079,essv7030190,essv7030301,essv7030412,essv7030523,essv7030634,nssv708621,nssv708622,nssv708623,nssv708624;num_studies=3;studies=Park2010,Vogler2010,Cooper2011;num_platforms=3;platforms=Affymetrix6.0,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=PennCNV+Birdseye,Custom_HMM,ADM2;num_samples=19;samples=NA18552,SW_1302,sample_nssv708627,sample_nssv708626,sample_nssv708625,sample_nssv708624,RW_0203,sample_nssv708622,sample_nssv708621,SW_0856,RW_0166,sample_nssv708623,SW_0818,RW_0162,SW_1103,SW_0020,SW_0789,RW_0108,SW_0773;num_samples_tested=2639;frequency=0.72%;num_unique_samples_tested=2639;nr_frequency=0.71%;PopulationSummary=European 14:Asian 1:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1658945	1658945	.	.	.	ID=gssv70;Name=gssv70;variant_type=CNV;variant_sub_type=Loss;outer_start=1658945;inner_start=1660501;inner_end=1691900;outer_end=1691900;inner_rank=8;num_variants=2;variants=nssv2997181,nssv708634;num_studies=2;studies=Cooper2011,Dogan2014;num_platforms=2;platforms=Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,Custom_HMM;num_samples=2;samples=BILGI_BIOE,sample_nssv708634;num_samples_tested=1501;frequency=0.13%;num_unique_samples_tested=1501;nr_frequency=0.13%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1660501	1691900	.	.	.	ID=gssv70;Name=gssv70;variant_type=CNV;variant_sub_type=Loss;outer_start=1658945;inner_start=1660501;inner_end=1691900;outer_end=1691900;inner_rank=8;num_variants=2;variants=nssv2997181,nssv708634;num_studies=2;studies=Cooper2011,Dogan2014;num_platforms=2;platforms=Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,Custom_HMM;num_samples=2;samples=BILGI_BIOE,sample_nssv708634;num_samples_tested=1501;frequency=0.13%;num_unique_samples_tested=1501;nr_frequency=0.13%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1691900	1691900	.	.	.	ID=gssv70;Name=gssv70;variant_type=CNV;variant_sub_type=Loss;outer_start=1658945;inner_start=1660501;inner_end=1691900;outer_end=1691900;inner_rank=8;num_variants=2;variants=nssv2997181,nssv708634;num_studies=2;studies=Cooper2011,Dogan2014;num_platforms=2;platforms=Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,Custom_HMM;num_samples=2;samples=BILGI_BIOE,sample_nssv708634;num_samples_tested=1501;frequency=0.13%;num_unique_samples_tested=1501;nr_frequency=0.13%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	436729	436729	.	.	.	ID=gssv71;Name=gssv71;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=436729;inner_start=437035;inner_end=464829;outer_end=468644;inner_rank=7;num_variants=2;variants=essv55129,essv3586250;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=2;samples=HuRef,NA19099;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	437035	464829	.	.	.	ID=gssv71;Name=gssv71;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=436729;inner_start=437035;inner_end=464829;outer_end=468644;inner_rank=7;num_variants=2;variants=essv55129,essv3586250;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=2;samples=HuRef,NA19099;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	468644	468644	.	.	.	ID=gssv71;Name=gssv71;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=436729;inner_start=437035;inner_end=464829;outer_end=468644;inner_rank=7;num_variants=2;variants=essv55129,essv3586250;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=2;samples=HuRef,NA19099;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	544328	544328	.	.	.	ID=gssv74;Name=gssv74;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=544328;inner_start=547715;inner_end=574155;outer_end=574333;inner_rank=12;num_variants=24;variants=nssv26896,nssv21446,nssv18092,nssv18098,nssv18099,nssv18102,nssv18104,nssv18106,nssv18107,nssv18110,nssv18112,nssv18114,nssv18118,nssv18121,nssv21424,nssv21435,nssv21441,nssv21450,nssv24597,nssv24604,nssv24618,nssv24620,nssv707625,nssv14778;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=24;samples=NA18564,NA18563,NA19144,NA10839,NA18942,NA18552,NA18860,NA12155,NA19132,NA18517,sample_nssv707625,NA19007,NA18537,NA07029,NA12740,NA10863,NA19173,NA18972,NA18853,NA18975,NA18502,NA18504,NA19221,NA19240;num_samples_tested=1530;frequency=1.57%;num_unique_samples_tested=1530;nr_frequency=1.56%;PopulationSummary=European 6:Asian 8:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	547715	574155	.	.	.	ID=gssv74;Name=gssv74;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=544328;inner_start=547715;inner_end=574155;outer_end=574333;inner_rank=12;num_variants=24;variants=nssv26896,nssv21446,nssv18092,nssv18098,nssv18099,nssv18102,nssv18104,nssv18106,nssv18107,nssv18110,nssv18112,nssv18114,nssv18118,nssv18121,nssv21424,nssv21435,nssv21441,nssv21450,nssv24597,nssv24604,nssv24618,nssv24620,nssv707625,nssv14778;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=24;samples=NA18564,NA18563,NA19144,NA10839,NA18942,NA18552,NA18860,NA12155,NA19132,NA18517,sample_nssv707625,NA19007,NA18537,NA07029,NA12740,NA10863,NA19173,NA18972,NA18853,NA18975,NA18502,NA18504,NA19221,NA19240;num_samples_tested=1530;frequency=1.57%;num_unique_samples_tested=1530;nr_frequency=1.56%;PopulationSummary=European 6:Asian 8:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	574333	574333	.	.	.	ID=gssv74;Name=gssv74;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=544328;inner_start=547715;inner_end=574155;outer_end=574333;inner_rank=12;num_variants=24;variants=nssv26896,nssv21446,nssv18092,nssv18098,nssv18099,nssv18102,nssv18104,nssv18106,nssv18107,nssv18110,nssv18112,nssv18114,nssv18118,nssv18121,nssv21424,nssv21435,nssv21441,nssv21450,nssv24597,nssv24604,nssv24618,nssv24620,nssv707625,nssv14778;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=24;samples=NA18564,NA18563,NA19144,NA10839,NA18942,NA18552,NA18860,NA12155,NA19132,NA18517,sample_nssv707625,NA19007,NA18537,NA07029,NA12740,NA10863,NA19173,NA18972,NA18853,NA18975,NA18502,NA18504,NA19221,NA19240;num_samples_tested=1530;frequency=1.57%;num_unique_samples_tested=1530;nr_frequency=1.56%;PopulationSummary=European 6:Asian 8:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1400202	1400202	.	.	.	ID=gssv75;Name=gssv75;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1400202;inner_start=1401811;inner_end=1429556;outer_end=1431581;inner_rank=8;num_variants=7;variants=essv9773310,essv9774421,essv9775532,essv9776643,essv9778866,nssv558507,essv9781088;num_studies=2;studies=Uddin2014,Schuster2010;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_GA+454;num_algorithms=2;algorithms=ChAS,ReadDepth;num_samples=7;samples=401314MK,400641WJ,400554WB,401769CR,401432SB,401513KC,KB1;num_samples_tested=874;frequency=0.8%;num_unique_samples_tested=874;nr_frequency=0.8%;PopulationSummary=European 6:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1401811	1429556	.	.	.	ID=gssv75;Name=gssv75;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1400202;inner_start=1401811;inner_end=1429556;outer_end=1431581;inner_rank=8;num_variants=7;variants=essv9773310,essv9774421,essv9775532,essv9776643,essv9778866,nssv558507,essv9781088;num_studies=2;studies=Uddin2014,Schuster2010;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_GA+454;num_algorithms=2;algorithms=ChAS,ReadDepth;num_samples=7;samples=401314MK,400641WJ,400554WB,401769CR,401432SB,401513KC,KB1;num_samples_tested=874;frequency=0.8%;num_unique_samples_tested=874;nr_frequency=0.8%;PopulationSummary=European 6:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1431581	1431581	.	.	.	ID=gssv75;Name=gssv75;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1400202;inner_start=1401811;inner_end=1429556;outer_end=1431581;inner_rank=8;num_variants=7;variants=essv9773310,essv9774421,essv9775532,essv9776643,essv9778866,nssv558507,essv9781088;num_studies=2;studies=Uddin2014,Schuster2010;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_GA+454;num_algorithms=2;algorithms=ChAS,ReadDepth;num_samples=7;samples=401314MK,400641WJ,400554WB,401769CR,401432SB,401513KC,KB1;num_samples_tested=874;frequency=0.8%;num_unique_samples_tested=874;nr_frequency=0.8%;PopulationSummary=European 6:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1644908	1644908	.	.	.	ID=gssv78;Name=gssv78;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1644908;inner_start=1646512;inner_end=1670922;outer_end=1672603;inner_rank=10;num_variants=10;variants=nssv708629,nssv708630,essv7004909,essv7004910,essv9768422,essv9768533,nssv708631,nssv28533,essv7004908,nssv1431056;num_studies=5;studies=Uddin2014,Perry2008,Vogler2010,Cooper2011,Park2010;num_platforms=5;platforms=CytoScanHD_2.7M,Affymetrix6.0,Custom_Illumina_1.2M,AgilentCustom_015685+015686+244K,Agilent24M;num_algorithms=4;algorithms=PennCNV+Birdseye,ChAS,Custom_HMM,ADM2;num_samples=10;samples=sample_nssv708629,AK18,RW_0137,401693RC,NA10839,sample_nssv708630,sample_nssv708631,RW_0154,401432SB,RW_0533;num_samples_tested=3542;frequency=0.28%;num_unique_samples_tested=3537;nr_frequency=0.28%;PopulationSummary=European 6:Asian 1:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1646512	1670922	.	.	.	ID=gssv78;Name=gssv78;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1644908;inner_start=1646512;inner_end=1670922;outer_end=1672603;inner_rank=10;num_variants=10;variants=nssv708629,nssv708630,essv7004909,essv7004910,essv9768422,essv9768533,nssv708631,nssv28533,essv7004908,nssv1431056;num_studies=5;studies=Uddin2014,Perry2008,Vogler2010,Cooper2011,Park2010;num_platforms=5;platforms=CytoScanHD_2.7M,Affymetrix6.0,Custom_Illumina_1.2M,AgilentCustom_015685+015686+244K,Agilent24M;num_algorithms=4;algorithms=PennCNV+Birdseye,ChAS,Custom_HMM,ADM2;num_samples=10;samples=sample_nssv708629,AK18,RW_0137,401693RC,NA10839,sample_nssv708630,sample_nssv708631,RW_0154,401432SB,RW_0533;num_samples_tested=3542;frequency=0.28%;num_unique_samples_tested=3537;nr_frequency=0.28%;PopulationSummary=European 6:Asian 1:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1672603	1672603	.	.	.	ID=gssv78;Name=gssv78;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1644908;inner_start=1646512;inner_end=1670922;outer_end=1672603;inner_rank=10;num_variants=10;variants=nssv708629,nssv708630,essv7004909,essv7004910,essv9768422,essv9768533,nssv708631,nssv28533,essv7004908,nssv1431056;num_studies=5;studies=Uddin2014,Perry2008,Vogler2010,Cooper2011,Park2010;num_platforms=5;platforms=CytoScanHD_2.7M,Affymetrix6.0,Custom_Illumina_1.2M,AgilentCustom_015685+015686+244K,Agilent24M;num_algorithms=4;algorithms=PennCNV+Birdseye,ChAS,Custom_HMM,ADM2;num_samples=10;samples=sample_nssv708629,AK18,RW_0137,401693RC,NA10839,sample_nssv708630,sample_nssv708631,RW_0154,401432SB,RW_0533;num_samples_tested=3542;frequency=0.28%;num_unique_samples_tested=3537;nr_frequency=0.28%;PopulationSummary=European 6:Asian 1:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	521458	521458	.	.	.	ID=gssv80;Name=gssv80;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=521458;inner_start=521505;inner_end=545843;outer_end=547879;inner_rank=7;num_variants=12;variants=essv3586722,nssv1749554,nssv1749555,nssv1749556,nssv1749557,nssv1749558,nssv1749559,nssv1749560,nssv1749561,nssv1749562,nssv1749563,essv55274;num_studies=3;studies=Pang2010,Conrad2009,Sudmant2013;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=12;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HuRef,HGDP00665,HGDP01029,NA19099,HGDP00998,HGDP00521;num_samples_tested=51;frequency=23.53%;num_unique_samples_tested=51;nr_frequency=23.52%;PopulationSummary=European 3:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	521505	545843	.	.	.	ID=gssv80;Name=gssv80;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=521458;inner_start=521505;inner_end=545843;outer_end=547879;inner_rank=7;num_variants=12;variants=essv3586722,nssv1749554,nssv1749555,nssv1749556,nssv1749557,nssv1749558,nssv1749559,nssv1749560,nssv1749561,nssv1749562,nssv1749563,essv55274;num_studies=3;studies=Pang2010,Conrad2009,Sudmant2013;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=12;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HuRef,HGDP00665,HGDP01029,NA19099,HGDP00998,HGDP00521;num_samples_tested=51;frequency=23.53%;num_unique_samples_tested=51;nr_frequency=23.52%;PopulationSummary=European 3:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	547879	547879	.	.	.	ID=gssv80;Name=gssv80;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=521458;inner_start=521505;inner_end=545843;outer_end=547879;inner_rank=7;num_variants=12;variants=essv3586722,nssv1749554,nssv1749555,nssv1749556,nssv1749557,nssv1749558,nssv1749559,nssv1749560,nssv1749561,nssv1749562,nssv1749563,essv55274;num_studies=3;studies=Pang2010,Conrad2009,Sudmant2013;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=12;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HuRef,HGDP00665,HGDP01029,NA19099,HGDP00998,HGDP00521;num_samples_tested=51;frequency=23.53%;num_unique_samples_tested=51;nr_frequency=23.52%;PopulationSummary=European 3:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1627918	1627918	.	.	.	ID=gssv85;Name=gssv85;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1627918;inner_start=1629481;inner_end=1653244;outer_end=1655791;inner_rank=8;num_variants=4;variants=essv7004880,essv7004881,essv7004882,nssv558529;num_studies=2;studies=Vogler2010,Schuster2010;num_platforms=2;platforms=Affymetrix6.0,Illumina_GA+454;num_algorithms=2;algorithms=PennCNV+Birdseye,ReadDepth;num_samples=4;samples=KB1,RW_0008,RW_0007,RW_0276;num_samples_tested=1110;frequency=0.36%;num_unique_samples_tested=1110;nr_frequency=0.36%;PopulationSummary=European 0:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1629481	1653244	.	.	.	ID=gssv85;Name=gssv85;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1627918;inner_start=1629481;inner_end=1653244;outer_end=1655791;inner_rank=8;num_variants=4;variants=essv7004880,essv7004881,essv7004882,nssv558529;num_studies=2;studies=Vogler2010,Schuster2010;num_platforms=2;platforms=Affymetrix6.0,Illumina_GA+454;num_algorithms=2;algorithms=PennCNV+Birdseye,ReadDepth;num_samples=4;samples=KB1,RW_0008,RW_0007,RW_0276;num_samples_tested=1110;frequency=0.36%;num_unique_samples_tested=1110;nr_frequency=0.36%;PopulationSummary=European 0:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1655791	1655791	.	.	.	ID=gssv85;Name=gssv85;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1627918;inner_start=1629481;inner_end=1653244;outer_end=1655791;inner_rank=8;num_variants=4;variants=essv7004880,essv7004881,essv7004882,nssv558529;num_studies=2;studies=Vogler2010,Schuster2010;num_platforms=2;platforms=Affymetrix6.0,Illumina_GA+454;num_algorithms=2;algorithms=PennCNV+Birdseye,ReadDepth;num_samples=4;samples=KB1,RW_0008,RW_0007,RW_0276;num_samples_tested=1110;frequency=0.36%;num_unique_samples_tested=1110;nr_frequency=0.36%;PopulationSummary=European 0:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1443968	1443968	.	.	.	ID=gssv87;Name=gssv87;variant_type=CNV;variant_sub_type=Gain;outer_start=1443968;inner_start=1447555;inner_end=1470064;outer_end=1470064;inner_rank=8;num_variants=2;variants=nssv558518,nssv1440791;num_studies=2;studies=Park2010,Schuster2010;num_platforms=2;platforms=Agilent24M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=2;samples=NA18969,KB1;num_samples_tested=31;frequency=6.45%;num_unique_samples_tested=31;nr_frequency=6.45%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1447555	1470064	.	.	.	ID=gssv87;Name=gssv87;variant_type=CNV;variant_sub_type=Gain;outer_start=1443968;inner_start=1447555;inner_end=1470064;outer_end=1470064;inner_rank=8;num_variants=2;variants=nssv558518,nssv1440791;num_studies=2;studies=Park2010,Schuster2010;num_platforms=2;platforms=Agilent24M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=2;samples=NA18969,KB1;num_samples_tested=31;frequency=6.45%;num_unique_samples_tested=31;nr_frequency=6.45%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1470064	1470064	.	.	.	ID=gssv87;Name=gssv87;variant_type=CNV;variant_sub_type=Gain;outer_start=1443968;inner_start=1447555;inner_end=1470064;outer_end=1470064;inner_rank=8;num_variants=2;variants=nssv558518,nssv1440791;num_studies=2;studies=Park2010,Schuster2010;num_platforms=2;platforms=Agilent24M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=2;samples=NA18969,KB1;num_samples_tested=31;frequency=6.45%;num_unique_samples_tested=31;nr_frequency=6.45%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	768793	768793	.	.	.	ID=gssv88;Name=gssv88;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=768793;inner_start=774667;inner_end=791857;outer_end=791968;inner_rank=8;num_variants=17;variants=essv7007410,nssv28048,essv9839485,essv9839486,essv9839487,essv9839488,essv9839489,essv9839490,essv9839491,essv9839492,essv9839493,essv9839494,essv9839495,essv9839496,essv9839497,essv9839498,essv9839499;num_studies=3;studies=Perry2008,Vogler2010,1000GenomesPhase3;num_platforms=3;platforms=Affymetrix6.0,AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,RD+PEM,ADM2;num_samples=17;samples=SW_1162,HG01357,HG01680,HG01350,HG01491,NA18972,HG01766,HG01785,HG01359,NA18976,HG01498,NA07051,HG01177,HG01389,NA20812,HG01375,HG01374;num_samples_tested=3643;frequency=0.47%;num_unique_samples_tested=3623;nr_frequency=0.46%;PopulationSummary=European 6:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 9:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	774667	791857	.	.	.	ID=gssv88;Name=gssv88;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=768793;inner_start=774667;inner_end=791857;outer_end=791968;inner_rank=8;num_variants=17;variants=essv7007410,nssv28048,essv9839485,essv9839486,essv9839487,essv9839488,essv9839489,essv9839490,essv9839491,essv9839492,essv9839493,essv9839494,essv9839495,essv9839496,essv9839497,essv9839498,essv9839499;num_studies=3;studies=Perry2008,Vogler2010,1000GenomesPhase3;num_platforms=3;platforms=Affymetrix6.0,AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,RD+PEM,ADM2;num_samples=17;samples=SW_1162,HG01357,HG01680,HG01350,HG01491,NA18972,HG01766,HG01785,HG01359,NA18976,HG01498,NA07051,HG01177,HG01389,NA20812,HG01375,HG01374;num_samples_tested=3643;frequency=0.47%;num_unique_samples_tested=3623;nr_frequency=0.46%;PopulationSummary=European 6:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 9:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	791968	791968	.	.	.	ID=gssv88;Name=gssv88;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=768793;inner_start=774667;inner_end=791857;outer_end=791968;inner_rank=8;num_variants=17;variants=essv7007410,nssv28048,essv9839485,essv9839486,essv9839487,essv9839488,essv9839489,essv9839490,essv9839491,essv9839492,essv9839493,essv9839494,essv9839495,essv9839496,essv9839497,essv9839498,essv9839499;num_studies=3;studies=Perry2008,Vogler2010,1000GenomesPhase3;num_platforms=3;platforms=Affymetrix6.0,AgilentCustom_015685+015686+244K,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,RD+PEM,ADM2;num_samples=17;samples=SW_1162,HG01357,HG01680,HG01350,HG01491,NA18972,HG01766,HG01785,HG01359,NA18976,HG01498,NA07051,HG01177,HG01389,NA20812,HG01375,HG01374;num_samples_tested=3643;frequency=0.47%;num_unique_samples_tested=3623;nr_frequency=0.46%;PopulationSummary=European 6:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 9:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1385069	1385069	.	.	.	ID=gssv89;Name=gssv89;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1385069;inner_start=1388860;inner_end=1410670;outer_end=1410796;inner_rank=8;num_variants=42;variants=essv9840643,essv9840644,essv9840645,essv9840646,essv9840647,essv9840648,essv9840649,essv9840650,essv9840651,essv9840652,essv9840653,essv9840654,essv9840655,essv9840656,essv9840657,essv9840658,essv9840659,essv9840660,essv9840661,essv9840662,essv9840663,essv9840664,essv9840665,essv9840666,essv9840667,essv9840668,essv9840669,essv9840670,essv9840671,essv9840672,essv9840673,essv9840674,essv9840675,essv9840676,essv9840677,essv9840678,essv9840679,essv9840680,essv9840681,essv9840682,essv9840683,nssv558496;num_studies=2;studies=Schuster2010,1000GenomesPhase3;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,RD+PEM;num_samples=42;samples=NA11920,HG03097,HG00232,NA19189,NA12546,HG02465,HG03234,HG03464,HG00109,HG01842,HG01509,HG01631,HG03298,NA19308,NA18516,HG01694,NA11918,HG03265,HG03693,NA19171,NA20870,HG02648,NA12046,HG01607,HG03433,HG01085,KB1,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG02561,HG01280,NA12778,HG04182,HG00536,HG03844,NA21108;num_samples_tested=2505;frequency=1.68%;num_unique_samples_tested=2505;nr_frequency=1.67%;PopulationSummary=European 13:Asian 9:Mexican 1:African 13:Admixed 0:MiddleEast 0:NativeAmerican 3:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1388860	1410670	.	.	.	ID=gssv89;Name=gssv89;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1385069;inner_start=1388860;inner_end=1410670;outer_end=1410796;inner_rank=8;num_variants=42;variants=essv9840643,essv9840644,essv9840645,essv9840646,essv9840647,essv9840648,essv9840649,essv9840650,essv9840651,essv9840652,essv9840653,essv9840654,essv9840655,essv9840656,essv9840657,essv9840658,essv9840659,essv9840660,essv9840661,essv9840662,essv9840663,essv9840664,essv9840665,essv9840666,essv9840667,essv9840668,essv9840669,essv9840670,essv9840671,essv9840672,essv9840673,essv9840674,essv9840675,essv9840676,essv9840677,essv9840678,essv9840679,essv9840680,essv9840681,essv9840682,essv9840683,nssv558496;num_studies=2;studies=Schuster2010,1000GenomesPhase3;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,RD+PEM;num_samples=42;samples=NA11920,HG03097,HG00232,NA19189,NA12546,HG02465,HG03234,HG03464,HG00109,HG01842,HG01509,HG01631,HG03298,NA19308,NA18516,HG01694,NA11918,HG03265,HG03693,NA19171,NA20870,HG02648,NA12046,HG01607,HG03433,HG01085,KB1,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG02561,HG01280,NA12778,HG04182,HG00536,HG03844,NA21108;num_samples_tested=2505;frequency=1.68%;num_unique_samples_tested=2505;nr_frequency=1.67%;PopulationSummary=European 13:Asian 9:Mexican 1:African 13:Admixed 0:MiddleEast 0:NativeAmerican 3:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1410796	1410796	.	.	.	ID=gssv89;Name=gssv89;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1385069;inner_start=1388860;inner_end=1410670;outer_end=1410796;inner_rank=8;num_variants=42;variants=essv9840643,essv9840644,essv9840645,essv9840646,essv9840647,essv9840648,essv9840649,essv9840650,essv9840651,essv9840652,essv9840653,essv9840654,essv9840655,essv9840656,essv9840657,essv9840658,essv9840659,essv9840660,essv9840661,essv9840662,essv9840663,essv9840664,essv9840665,essv9840666,essv9840667,essv9840668,essv9840669,essv9840670,essv9840671,essv9840672,essv9840673,essv9840674,essv9840675,essv9840676,essv9840677,essv9840678,essv9840679,essv9840680,essv9840681,essv9840682,essv9840683,nssv558496;num_studies=2;studies=Schuster2010,1000GenomesPhase3;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,RD+PEM;num_samples=42;samples=NA11920,HG03097,HG00232,NA19189,NA12546,HG02465,HG03234,HG03464,HG00109,HG01842,HG01509,HG01631,HG03298,NA19308,NA18516,HG01694,NA11918,HG03265,HG03693,NA19171,NA20870,HG02648,NA12046,HG01607,HG03433,HG01085,KB1,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG02561,HG01280,NA12778,HG04182,HG00536,HG03844,NA21108;num_samples_tested=2505;frequency=1.68%;num_unique_samples_tested=2505;nr_frequency=1.67%;PopulationSummary=European 13:Asian 9:Mexican 1:African 13:Admixed 0:MiddleEast 0:NativeAmerican 3:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	86778	86778	.	.	.	ID=gssv90;Name=gssv90;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=86778;inner_start=87446;inner_end=109121;outer_end=109121;inner_rank=7;num_variants=2;variants=essv76801,nssv14782;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=2;samples=NA18942,NA18511;num_samples_tested=70;frequency=2.86%;num_unique_samples_tested=67;nr_frequency=2.98%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	87446	109121	.	.	.	ID=gssv90;Name=gssv90;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=86778;inner_start=87446;inner_end=109121;outer_end=109121;inner_rank=7;num_variants=2;variants=essv76801,nssv14782;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=2;samples=NA18942,NA18511;num_samples_tested=70;frequency=2.86%;num_unique_samples_tested=67;nr_frequency=2.98%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	109121	109121	.	.	.	ID=gssv90;Name=gssv90;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=86778;inner_start=87446;inner_end=109121;outer_end=109121;inner_rank=7;num_variants=2;variants=essv76801,nssv14782;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=2;samples=NA18942,NA18511;num_samples_tested=70;frequency=2.86%;num_unique_samples_tested=67;nr_frequency=2.98%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	317720	317720	.	.	.	ID=gssv93;Name=gssv93;variant_type=CNV;variant_sub_type=Gain;outer_start=317720;inner_start=317724;inner_end=337679;outer_end=337700;inner_rank=7;num_variants=11;variants=nssv1755975,nssv1755976,nssv1755977,nssv1755978,nssv1755979,nssv1755980,nssv1755981,nssv1755982,nssv1755983,nssv1755984,essv34559;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,NA18502,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 2:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	317724	337679	.	.	.	ID=gssv93;Name=gssv93;variant_type=CNV;variant_sub_type=Gain;outer_start=317720;inner_start=317724;inner_end=337679;outer_end=337700;inner_rank=7;num_variants=11;variants=nssv1755975,nssv1755976,nssv1755977,nssv1755978,nssv1755979,nssv1755980,nssv1755981,nssv1755982,nssv1755983,nssv1755984,essv34559;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,NA18502,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 2:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	337700	337700	.	.	.	ID=gssv93;Name=gssv93;variant_type=CNV;variant_sub_type=Gain;outer_start=317720;inner_start=317724;inner_end=337679;outer_end=337700;inner_rank=7;num_variants=11;variants=nssv1755975,nssv1755976,nssv1755977,nssv1755978,nssv1755979,nssv1755980,nssv1755981,nssv1755982,nssv1755983,nssv1755984,essv34559;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,NA18502,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 2:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1595368	1595368	.	.	.	ID=gssv100;Name=gssv100;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1595368;inner_start=1595415;inner_end=1612524;outer_end=1615348;inner_rank=8;num_variants=35;variants=nssv708610,essv9840991,essv9840992,essv9840993,essv9840994,essv9840995,essv9840996,essv9840997,essv9840998,essv9840999,essv9841000,essv9841001,essv9841002,essv9841003,essv9841004,essv9841005,essv9841006,essv9841007,essv9841008,essv9841009,essv9841010,essv9841011,essv9841012,essv9841013,essv9841014,essv9841015,essv9841016,essv9841017,essv9841018,essv9841019,essv9841020,essv9841021,essv9841022,essv9841023,essv9841024;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=35;samples=NA18542,NA20819,sample_nssv708610,HG01806,HG01801,NA18566,NA19327,HG00641,HG00237,HG01840,HG01174,HG00608,HG03833,HG02224,HG00766,NA19723,HG02010,HG01812,HG02399,HG01810,HG01892,HG03634,HG03885,HG00116,HG03611,HG02052,HG01577,HG00320,NA18582,HG00614,HG02236,HG02190,HG01204,HG01878,NA20866;num_samples_tested=4004;frequency=0.87%;num_unique_samples_tested=4004;nr_frequency=0.87%;PopulationSummary=European 7:Asian 18:Mexican 1:African 3:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1595415	1612524	.	.	.	ID=gssv100;Name=gssv100;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1595368;inner_start=1595415;inner_end=1612524;outer_end=1615348;inner_rank=8;num_variants=35;variants=nssv708610,essv9840991,essv9840992,essv9840993,essv9840994,essv9840995,essv9840996,essv9840997,essv9840998,essv9840999,essv9841000,essv9841001,essv9841002,essv9841003,essv9841004,essv9841005,essv9841006,essv9841007,essv9841008,essv9841009,essv9841010,essv9841011,essv9841012,essv9841013,essv9841014,essv9841015,essv9841016,essv9841017,essv9841018,essv9841019,essv9841020,essv9841021,essv9841022,essv9841023,essv9841024;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=35;samples=NA18542,NA20819,sample_nssv708610,HG01806,HG01801,NA18566,NA19327,HG00641,HG00237,HG01840,HG01174,HG00608,HG03833,HG02224,HG00766,NA19723,HG02010,HG01812,HG02399,HG01810,HG01892,HG03634,HG03885,HG00116,HG03611,HG02052,HG01577,HG00320,NA18582,HG00614,HG02236,HG02190,HG01204,HG01878,NA20866;num_samples_tested=4004;frequency=0.87%;num_unique_samples_tested=4004;nr_frequency=0.87%;PopulationSummary=European 7:Asian 18:Mexican 1:African 3:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1615348	1615348	.	.	.	ID=gssv100;Name=gssv100;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1595368;inner_start=1595415;inner_end=1612524;outer_end=1615348;inner_rank=8;num_variants=35;variants=nssv708610,essv9840991,essv9840992,essv9840993,essv9840994,essv9840995,essv9840996,essv9840997,essv9840998,essv9840999,essv9841000,essv9841001,essv9841002,essv9841003,essv9841004,essv9841005,essv9841006,essv9841007,essv9841008,essv9841009,essv9841010,essv9841011,essv9841012,essv9841013,essv9841014,essv9841015,essv9841016,essv9841017,essv9841018,essv9841019,essv9841020,essv9841021,essv9841022,essv9841023,essv9841024;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=35;samples=NA18542,NA20819,sample_nssv708610,HG01806,HG01801,NA18566,NA19327,HG00641,HG00237,HG01840,HG01174,HG00608,HG03833,HG02224,HG00766,NA19723,HG02010,HG01812,HG02399,HG01810,HG01892,HG03634,HG03885,HG00116,HG03611,HG02052,HG01577,HG00320,NA18582,HG00614,HG02236,HG02190,HG01204,HG01878,NA20866;num_samples_tested=4004;frequency=0.87%;num_unique_samples_tested=4004;nr_frequency=0.87%;PopulationSummary=European 7:Asian 18:Mexican 1:African 3:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	776659	776659	.	.	.	ID=gssv109;Name=gssv109;variant_type=CNV;variant_sub_type=Loss;outer_start=776659;inner_start=776755;inner_end=791969;outer_end=792588;inner_rank=8;num_variants=8;variants=essv9738422,essv5463605,essv5826571,essv6020202,essv6094713,essv6143600,essv6257481,essv6345413;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=8;samples=HG01357,HG01350,HG01491,HG01359,sample_essv9738422,HG01374,HG01375,HG01389;num_samples_tested=1822;frequency=0.44%;num_unique_samples_tested=1822;nr_frequency=0.43%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 7:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	776755	791969	.	.	.	ID=gssv109;Name=gssv109;variant_type=CNV;variant_sub_type=Loss;outer_start=776659;inner_start=776755;inner_end=791969;outer_end=792588;inner_rank=8;num_variants=8;variants=essv9738422,essv5463605,essv5826571,essv6020202,essv6094713,essv6143600,essv6257481,essv6345413;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=8;samples=HG01357,HG01350,HG01491,HG01359,sample_essv9738422,HG01374,HG01375,HG01389;num_samples_tested=1822;frequency=0.44%;num_unique_samples_tested=1822;nr_frequency=0.43%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 7:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	792588	792588	.	.	.	ID=gssv109;Name=gssv109;variant_type=CNV;variant_sub_type=Loss;outer_start=776659;inner_start=776755;inner_end=791969;outer_end=792588;inner_rank=8;num_variants=8;variants=essv9738422,essv5463605,essv5826571,essv6020202,essv6094713,essv6143600,essv6257481,essv6345413;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=8;samples=HG01357,HG01350,HG01491,HG01359,sample_essv9738422,HG01374,HG01375,HG01389;num_samples_tested=1822;frequency=0.44%;num_unique_samples_tested=1822;nr_frequency=0.43%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 7:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	21064	21064	.	.	.	ID=gssv114;Name=gssv114;variant_type=CNV;variant_sub_type=Gain;outer_start=21064;inner_start=22022;inner_end=35107;outer_end=35983;inner_rank=8;num_variants=11;variants=nssv14773,nssv1749205,nssv1749206,nssv1749207,nssv1749208,nssv1749209,nssv1749210,nssv1749211,nssv1749213,nssv1749214,nssv1749215;num_studies=2;studies=Perry2008,Sudmant2013;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,NA18504,HGDP00998,HGDP00521;num_samples_tested=40;frequency=27.5%;num_unique_samples_tested=40;nr_frequency=27.5%;PopulationSummary=European 2:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	22022	35107	.	.	.	ID=gssv114;Name=gssv114;variant_type=CNV;variant_sub_type=Gain;outer_start=21064;inner_start=22022;inner_end=35107;outer_end=35983;inner_rank=8;num_variants=11;variants=nssv14773,nssv1749205,nssv1749206,nssv1749207,nssv1749208,nssv1749209,nssv1749210,nssv1749211,nssv1749213,nssv1749214,nssv1749215;num_studies=2;studies=Perry2008,Sudmant2013;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,NA18504,HGDP00998,HGDP00521;num_samples_tested=40;frequency=27.5%;num_unique_samples_tested=40;nr_frequency=27.5%;PopulationSummary=European 2:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	35983	35983	.	.	.	ID=gssv114;Name=gssv114;variant_type=CNV;variant_sub_type=Gain;outer_start=21064;inner_start=22022;inner_end=35107;outer_end=35983;inner_rank=8;num_variants=11;variants=nssv14773,nssv1749205,nssv1749206,nssv1749207,nssv1749208,nssv1749209,nssv1749210,nssv1749211,nssv1749213,nssv1749214,nssv1749215;num_studies=2;studies=Perry2008,Sudmant2013;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,NA18504,HGDP00998,HGDP00521;num_samples_tested=40;frequency=27.5%;num_unique_samples_tested=40;nr_frequency=27.5%;PopulationSummary=European 2:Asian 2:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1411587	1411587	.	.	.	ID=gssv117;Name=gssv117;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1411587;inner_start=1411587;inner_end=1426269;outer_end=1429151;inner_rank=8;num_variants=11;variants=nssv1750527,nssv1750528,nssv1750530,nssv1750531,nssv1750532,nssv1750533,nssv1750534,nssv1750535,nssv1750536,nssv1750537,essv9782199;num_studies=2;studies=Uddin2014,Sudmant2013;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_HiSeq;num_algorithms=2;algorithms=ChAS,ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,401869BG,HGDP00521,HGDP00998;num_samples_tested=883;frequency=1.25%;num_unique_samples_tested=883;nr_frequency=1.24%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1411587	1426269	.	.	.	ID=gssv117;Name=gssv117;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1411587;inner_start=1411587;inner_end=1426269;outer_end=1429151;inner_rank=8;num_variants=11;variants=nssv1750527,nssv1750528,nssv1750530,nssv1750531,nssv1750532,nssv1750533,nssv1750534,nssv1750535,nssv1750536,nssv1750537,essv9782199;num_studies=2;studies=Uddin2014,Sudmant2013;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_HiSeq;num_algorithms=2;algorithms=ChAS,ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,401869BG,HGDP00521,HGDP00998;num_samples_tested=883;frequency=1.25%;num_unique_samples_tested=883;nr_frequency=1.24%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1429151	1429151	.	.	.	ID=gssv117;Name=gssv117;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1411587;inner_start=1411587;inner_end=1426269;outer_end=1429151;inner_rank=8;num_variants=11;variants=nssv1750527,nssv1750528,nssv1750530,nssv1750531,nssv1750532,nssv1750533,nssv1750534,nssv1750535,nssv1750536,nssv1750537,essv9782199;num_studies=2;studies=Uddin2014,Sudmant2013;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_HiSeq;num_algorithms=2;algorithms=ChAS,ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,401869BG,HGDP00521,HGDP00998;num_samples_tested=883;frequency=1.25%;num_unique_samples_tested=883;nr_frequency=1.24%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	664301	664301	.	.	.	ID=gssv129;Name=gssv129;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=664301;inner_start=664724;inner_end=675995;outer_end=676118;inner_rank=7;num_variants=3;variants=essv50157,nssv2997104,essv72522;num_studies=2;studies=Conrad2009,Dogan2014;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=BILGI_BIOE,NA18517,NA19225;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	664724	675995	.	.	.	ID=gssv129;Name=gssv129;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=664301;inner_start=664724;inner_end=675995;outer_end=676118;inner_rank=7;num_variants=3;variants=essv50157,nssv2997104,essv72522;num_studies=2;studies=Conrad2009,Dogan2014;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=BILGI_BIOE,NA18517,NA19225;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	676118	676118	.	.	.	ID=gssv129;Name=gssv129;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=664301;inner_start=664724;inner_end=675995;outer_end=676118;inner_rank=7;num_variants=3;variants=essv50157,nssv2997104,essv72522;num_studies=2;studies=Conrad2009,Dogan2014;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=BILGI_BIOE,NA18517,NA19225;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	963826	963826	.	.	.	ID=gssv134;Name=gssv134;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=963826;inner_start=963826;inner_end=974172;outer_end=974172;inner_rank=8;num_variants=57;variants=essv9839580,essv9839581,essv9839582,essv9839583,essv9839584,essv9839585,essv9839586,essv9839587,essv9839588,essv9839589,essv9839590,essv9839591,essv9839592,essv9839593,essv9839594,essv9839595,essv9839596,essv9839597,essv9839598,essv9839599,essv9839600,essv9839601,essv9839602,essv9839603,essv9839604,essv9839605,essv9839606,essv9839607,essv9839608,essv9839609,essv9839610,essv9839611,essv9839612,essv9839613,essv9839614,essv9839615,essv9839616,essv9839617,essv9839618,essv9839619,essv9839620,essv9839621,nssv708458,nssv708459,nssv708492,nssv708493,nssv708456,nssv708457,nssv708483,nssv708484,nssv708485,nssv708486,nssv708487,nssv708488,nssv708489,nssv708490,nssv708491;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=57;samples=NA19031,NA19149,sample_nssv708490,sample_nssv708491,sample_nssv708492,sample_nssv708493,NA21109,NA19189,NA18525,HG02285,HG01625,HG00350,NA18946,sample_nssv708456,sample_nssv708457,HG02484,sample_nssv708459,HG01630,NA18993,sample_nssv708458,HG02089,HG01626,HG01277,NA12872,NA12815,NA12874,NA18639,sample_nssv708489,sample_nssv708488,HG02013,NA20757,sample_nssv708487,sample_nssv708486,sample_nssv708485,sample_nssv708484,HG01985,NA21113,NA19700,HG02140,NA18957,HG01628,HG02134,HG00130,HG03224,HG02277,NA19438,HG01344,NA18645,NA19922,NA19431,NA18640,NA18939,sample_nssv708483,NA18749,NA19734,NA18747,HG02508;num_samples_tested=4004;frequency=1.42%;num_unique_samples_tested=4004;nr_frequency=1.42%;PopulationSummary=European 25:Asian 12:Mexican 1:African 12:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	963826	974172	.	.	.	ID=gssv134;Name=gssv134;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=963826;inner_start=963826;inner_end=974172;outer_end=974172;inner_rank=8;num_variants=57;variants=essv9839580,essv9839581,essv9839582,essv9839583,essv9839584,essv9839585,essv9839586,essv9839587,essv9839588,essv9839589,essv9839590,essv9839591,essv9839592,essv9839593,essv9839594,essv9839595,essv9839596,essv9839597,essv9839598,essv9839599,essv9839600,essv9839601,essv9839602,essv9839603,essv9839604,essv9839605,essv9839606,essv9839607,essv9839608,essv9839609,essv9839610,essv9839611,essv9839612,essv9839613,essv9839614,essv9839615,essv9839616,essv9839617,essv9839618,essv9839619,essv9839620,essv9839621,nssv708458,nssv708459,nssv708492,nssv708493,nssv708456,nssv708457,nssv708483,nssv708484,nssv708485,nssv708486,nssv708487,nssv708488,nssv708489,nssv708490,nssv708491;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=57;samples=NA19031,NA19149,sample_nssv708490,sample_nssv708491,sample_nssv708492,sample_nssv708493,NA21109,NA19189,NA18525,HG02285,HG01625,HG00350,NA18946,sample_nssv708456,sample_nssv708457,HG02484,sample_nssv708459,HG01630,NA18993,sample_nssv708458,HG02089,HG01626,HG01277,NA12872,NA12815,NA12874,NA18639,sample_nssv708489,sample_nssv708488,HG02013,NA20757,sample_nssv708487,sample_nssv708486,sample_nssv708485,sample_nssv708484,HG01985,NA21113,NA19700,HG02140,NA18957,HG01628,HG02134,HG00130,HG03224,HG02277,NA19438,HG01344,NA18645,NA19922,NA19431,NA18640,NA18939,sample_nssv708483,NA18749,NA19734,NA18747,HG02508;num_samples_tested=4004;frequency=1.42%;num_unique_samples_tested=4004;nr_frequency=1.42%;PopulationSummary=European 25:Asian 12:Mexican 1:African 12:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	974172	974172	.	.	.	ID=gssv134;Name=gssv134;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=963826;inner_start=963826;inner_end=974172;outer_end=974172;inner_rank=8;num_variants=57;variants=essv9839580,essv9839581,essv9839582,essv9839583,essv9839584,essv9839585,essv9839586,essv9839587,essv9839588,essv9839589,essv9839590,essv9839591,essv9839592,essv9839593,essv9839594,essv9839595,essv9839596,essv9839597,essv9839598,essv9839599,essv9839600,essv9839601,essv9839602,essv9839603,essv9839604,essv9839605,essv9839606,essv9839607,essv9839608,essv9839609,essv9839610,essv9839611,essv9839612,essv9839613,essv9839614,essv9839615,essv9839616,essv9839617,essv9839618,essv9839619,essv9839620,essv9839621,nssv708458,nssv708459,nssv708492,nssv708493,nssv708456,nssv708457,nssv708483,nssv708484,nssv708485,nssv708486,nssv708487,nssv708488,nssv708489,nssv708490,nssv708491;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=57;samples=NA19031,NA19149,sample_nssv708490,sample_nssv708491,sample_nssv708492,sample_nssv708493,NA21109,NA19189,NA18525,HG02285,HG01625,HG00350,NA18946,sample_nssv708456,sample_nssv708457,HG02484,sample_nssv708459,HG01630,NA18993,sample_nssv708458,HG02089,HG01626,HG01277,NA12872,NA12815,NA12874,NA18639,sample_nssv708489,sample_nssv708488,HG02013,NA20757,sample_nssv708487,sample_nssv708486,sample_nssv708485,sample_nssv708484,HG01985,NA21113,NA19700,HG02140,NA18957,HG01628,HG02134,HG00130,HG03224,HG02277,NA19438,HG01344,NA18645,NA19922,NA19431,NA18640,NA18939,sample_nssv708483,NA18749,NA19734,NA18747,HG02508;num_samples_tested=4004;frequency=1.42%;num_unique_samples_tested=4004;nr_frequency=1.42%;PopulationSummary=European 25:Asian 12:Mexican 1:African 12:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	460229	460229	.	.	.	ID=gssv135;Name=gssv135;variant_type=CNV;variant_sub_type=Gain;outer_start=460229;inner_start=461238;inner_end=471352;outer_end=471368;inner_rank=7;num_variants=3;variants=essv3586709,essv52394,nssv24614;num_studies=3;studies=Pang2010,Conrad2009,Perry2008;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=3;samples=NA18972,HuRef,NA12006;num_samples_tested=71;frequency=4.23%;num_unique_samples_tested=68;nr_frequency=4.41%;PopulationSummary=European 2:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	461238	471352	.	.	.	ID=gssv135;Name=gssv135;variant_type=CNV;variant_sub_type=Gain;outer_start=460229;inner_start=461238;inner_end=471352;outer_end=471368;inner_rank=7;num_variants=3;variants=essv3586709,essv52394,nssv24614;num_studies=3;studies=Pang2010,Conrad2009,Perry2008;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=3;samples=NA18972,HuRef,NA12006;num_samples_tested=71;frequency=4.23%;num_unique_samples_tested=68;nr_frequency=4.41%;PopulationSummary=European 2:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	471368	471368	.	.	.	ID=gssv135;Name=gssv135;variant_type=CNV;variant_sub_type=Gain;outer_start=460229;inner_start=461238;inner_end=471352;outer_end=471368;inner_rank=7;num_variants=3;variants=essv3586709,essv52394,nssv24614;num_studies=3;studies=Pang2010,Conrad2009,Perry2008;num_platforms=2;platforms=NimbleGen42M,AgilentCustom_015685+015686+244K;num_algorithms=2;algorithms=GADA,ADM2;num_samples=3;samples=NA18972,HuRef,NA12006;num_samples_tested=71;frequency=4.23%;num_unique_samples_tested=68;nr_frequency=4.41%;PopulationSummary=European 2:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1662938	1662938	.	.	.	ID=gssv141;Name=gssv141;variant_type=CNV;variant_sub_type=Loss;outer_start=1662938;inner_start=1663658;inner_end=1672055;outer_end=1672603;inner_rank=14;num_variants=3;variants=essv7004912,nssv708635,nssv708636;num_studies=2;studies=Vogler2010,Cooper2011;num_platforms=2;platforms=Affymetrix6.0,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=3;samples=sample_nssv708636,sample_nssv708635,RW_0276;num_samples_tested=2609;frequency=0.11%;num_unique_samples_tested=2609;nr_frequency=0.11%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1663658	1672055	.	.	.	ID=gssv141;Name=gssv141;variant_type=CNV;variant_sub_type=Loss;outer_start=1662938;inner_start=1663658;inner_end=1672055;outer_end=1672603;inner_rank=14;num_variants=3;variants=essv7004912,nssv708635,nssv708636;num_studies=2;studies=Vogler2010,Cooper2011;num_platforms=2;platforms=Affymetrix6.0,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=3;samples=sample_nssv708636,sample_nssv708635,RW_0276;num_samples_tested=2609;frequency=0.11%;num_unique_samples_tested=2609;nr_frequency=0.11%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1672603	1672603	.	.	.	ID=gssv141;Name=gssv141;variant_type=CNV;variant_sub_type=Loss;outer_start=1662938;inner_start=1663658;inner_end=1672055;outer_end=1672603;inner_rank=14;num_variants=3;variants=essv7004912,nssv708635,nssv708636;num_studies=2;studies=Vogler2010,Cooper2011;num_platforms=2;platforms=Affymetrix6.0,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PennCNV+Birdseye,Custom_HMM;num_samples=3;samples=sample_nssv708636,sample_nssv708635,RW_0276;num_samples_tested=2609;frequency=0.11%;num_unique_samples_tested=2609;nr_frequency=0.11%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1400225	1400225	.	.	.	ID=gssv145;Name=gssv145;variant_type=CNV;variant_sub_type=Loss;outer_start=1400225;inner_start=1400227;inner_end=1409102;outer_end=1409107;inner_rank=8;num_variants=35;variants=essv9840787,essv9840788,essv9840789,essv9840790,essv9840791,essv9840792,essv9840793,essv9840794,essv9840795,essv9840796,essv9840797,essv9840798,essv9840799,essv9840800,essv9840801,essv9840802,essv9840803,essv9840804,essv9840805,essv9840806,essv9840807,essv9840808,essv9840809,essv9840810,essv9840811,essv9840812,essv9840813,essv9840814,essv9840815,essv9840816,essv9840817,essv9840818,essv9840819,essv9840820,essv5912105;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=34;samples=NA11920,HG03097,HG00232,NA12546,HG02465,HG03234,HG00109,HG01842,HG01509,HG01631,HG03298,NA19308,NA19722,HG01694,NA11918,HG03693,HG02648,NA12046,HG03433,HG01085,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG01280,NA12778,HG04182,HG00536,HG03844,NA21108;num_samples_tested=3559;frequency=0.96%;num_unique_samples_tested=2562;nr_frequency=1.32%;PopulationSummary=European 12:Asian 9:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1400227	1409102	.	.	.	ID=gssv145;Name=gssv145;variant_type=CNV;variant_sub_type=Loss;outer_start=1400225;inner_start=1400227;inner_end=1409102;outer_end=1409107;inner_rank=8;num_variants=35;variants=essv9840787,essv9840788,essv9840789,essv9840790,essv9840791,essv9840792,essv9840793,essv9840794,essv9840795,essv9840796,essv9840797,essv9840798,essv9840799,essv9840800,essv9840801,essv9840802,essv9840803,essv9840804,essv9840805,essv9840806,essv9840807,essv9840808,essv9840809,essv9840810,essv9840811,essv9840812,essv9840813,essv9840814,essv9840815,essv9840816,essv9840817,essv9840818,essv9840819,essv9840820,essv5912105;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=34;samples=NA11920,HG03097,HG00232,NA12546,HG02465,HG03234,HG00109,HG01842,HG01509,HG01631,HG03298,NA19308,NA19722,HG01694,NA11918,HG03693,HG02648,NA12046,HG03433,HG01085,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG01280,NA12778,HG04182,HG00536,HG03844,NA21108;num_samples_tested=3559;frequency=0.96%;num_unique_samples_tested=2562;nr_frequency=1.32%;PopulationSummary=European 12:Asian 9:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1409107	1409107	.	.	.	ID=gssv145;Name=gssv145;variant_type=CNV;variant_sub_type=Loss;outer_start=1400225;inner_start=1400227;inner_end=1409102;outer_end=1409107;inner_rank=8;num_variants=35;variants=essv9840787,essv9840788,essv9840789,essv9840790,essv9840791,essv9840792,essv9840793,essv9840794,essv9840795,essv9840796,essv9840797,essv9840798,essv9840799,essv9840800,essv9840801,essv9840802,essv9840803,essv9840804,essv9840805,essv9840806,essv9840807,essv9840808,essv9840809,essv9840810,essv9840811,essv9840812,essv9840813,essv9840814,essv9840815,essv9840816,essv9840817,essv9840818,essv9840819,essv9840820,essv5912105;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=34;samples=NA11920,HG03097,HG00232,NA12546,HG02465,HG03234,HG00109,HG01842,HG01509,HG01631,HG03298,NA19308,NA19722,HG01694,NA11918,HG03693,HG02648,NA12046,HG03433,HG01085,HG01556,HG04214,NA19794,NA18486,HG00268,HG02232,HG02725,NA20910,HG01280,NA12778,HG04182,HG00536,HG03844,NA21108;num_samples_tested=3559;frequency=0.96%;num_unique_samples_tested=2562;nr_frequency=1.32%;PopulationSummary=European 12:Asian 9:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	463001	463001	.	.	.	ID=gssv154;Name=gssv154;variant_type=CNV;variant_sub_type=Gain;outer_start=463001;inner_start=463609;inner_end=471355;outer_end=471368;inner_rank=8;num_variants=21;variants=nssv3003132,nssv1748199,nssv1748200,nssv1748201,nssv1748202,nssv1748203,nssv1748204,nssv1748205,nssv1748206,nssv1748207,nssv1748208,nssv2571734,nssv2571735,nssv2571736,nssv2571737,nssv2571738,nssv2571739,nssv2571740,nssv2571741,nssv2571742,nssv2571743;num_studies=2;studies=Sudmant2013,Dogan2014;num_platforms=1;platforms=Illumina_HiSeq;num_algorithms=1;algorithms=ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,BILGI_BIOE,HGDP00521,HGDP00998;num_samples_tested=11;frequency=100%;num_unique_samples_tested=11;nr_frequency=100%;PopulationSummary=European 2:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	463609	471355	.	.	.	ID=gssv154;Name=gssv154;variant_type=CNV;variant_sub_type=Gain;outer_start=463001;inner_start=463609;inner_end=471355;outer_end=471368;inner_rank=8;num_variants=21;variants=nssv3003132,nssv1748199,nssv1748200,nssv1748201,nssv1748202,nssv1748203,nssv1748204,nssv1748205,nssv1748206,nssv1748207,nssv1748208,nssv2571734,nssv2571735,nssv2571736,nssv2571737,nssv2571738,nssv2571739,nssv2571740,nssv2571741,nssv2571742,nssv2571743;num_studies=2;studies=Sudmant2013,Dogan2014;num_platforms=1;platforms=Illumina_HiSeq;num_algorithms=1;algorithms=ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,BILGI_BIOE,HGDP00521,HGDP00998;num_samples_tested=11;frequency=100%;num_unique_samples_tested=11;nr_frequency=100%;PopulationSummary=European 2:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	471368	471368	.	.	.	ID=gssv154;Name=gssv154;variant_type=CNV;variant_sub_type=Gain;outer_start=463001;inner_start=463609;inner_end=471355;outer_end=471368;inner_rank=8;num_variants=21;variants=nssv3003132,nssv1748199,nssv1748200,nssv1748201,nssv1748202,nssv1748203,nssv1748204,nssv1748205,nssv1748206,nssv1748207,nssv1748208,nssv2571734,nssv2571735,nssv2571736,nssv2571737,nssv2571738,nssv2571739,nssv2571740,nssv2571741,nssv2571742,nssv2571743;num_studies=2;studies=Sudmant2013,Dogan2014;num_platforms=1;platforms=Illumina_HiSeq;num_algorithms=1;algorithms=ReadDepth;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,BILGI_BIOE,HGDP00521,HGDP00998;num_samples_tested=11;frequency=100%;num_unique_samples_tested=11;nr_frequency=100%;PopulationSummary=European 2:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	563896	563896	.	.	.	ID=gssv167;Name=gssv167;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=563896;inner_start=564343;inner_end=570208;outer_end=570775;inner_rank=7;num_variants=27;variants=nssv1419880,nssv1749667,nssv1749668,nssv1749669,nssv1749670,nssv1749671,nssv1749672,nssv1749673,nssv1749674,nssv1749675,nssv1749676,nssv2997093,essv57524,essv39034,essv56022,essv66578,essv76336,essv76584,essv69512,essv79193,essv63677,essv78333,essv65388,essv82685,essv70548,nssv707628,nssv707627;num_studies=5;studies=Ju2010,Sudmant2013,Cooper2011,Conrad2009,Dogan2014;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=ReadDepth,Custom_HMM,GADA;num_samples=27;samples=NA10851,HGDP01307,NA12828,HGDP00456,HGDP00998,HGDP01284,NA12749,HGDP00665,sample_nssv707628,NA18511,HGDP00521,NA12287,sample_nssv707627,NA19190,HGDP00542,HGDP01029,NA11993,NA07045,BILGI_BIOE,NA06985,HGDP00778,NA12414,NA12044,HGDP00927,NA18916,NA19240,NA12776;num_samples_tested=1552;frequency=1.74%;num_unique_samples_tested=1552;nr_frequency=1.73%;PopulationSummary=European 14:Asian 2:Mexican 0:African 8:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	564343	570208	.	.	.	ID=gssv167;Name=gssv167;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=563896;inner_start=564343;inner_end=570208;outer_end=570775;inner_rank=7;num_variants=27;variants=nssv1419880,nssv1749667,nssv1749668,nssv1749669,nssv1749670,nssv1749671,nssv1749672,nssv1749673,nssv1749674,nssv1749675,nssv1749676,nssv2997093,essv57524,essv39034,essv56022,essv66578,essv76336,essv76584,essv69512,essv79193,essv63677,essv78333,essv65388,essv82685,essv70548,nssv707628,nssv707627;num_studies=5;studies=Ju2010,Sudmant2013,Cooper2011,Conrad2009,Dogan2014;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=ReadDepth,Custom_HMM,GADA;num_samples=27;samples=NA10851,HGDP01307,NA12828,HGDP00456,HGDP00998,HGDP01284,NA12749,HGDP00665,sample_nssv707628,NA18511,HGDP00521,NA12287,sample_nssv707627,NA19190,HGDP00542,HGDP01029,NA11993,NA07045,BILGI_BIOE,NA06985,HGDP00778,NA12414,NA12044,HGDP00927,NA18916,NA19240,NA12776;num_samples_tested=1552;frequency=1.74%;num_unique_samples_tested=1552;nr_frequency=1.73%;PopulationSummary=European 14:Asian 2:Mexican 0:African 8:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	570775	570775	.	.	.	ID=gssv167;Name=gssv167;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=563896;inner_start=564343;inner_end=570208;outer_end=570775;inner_rank=7;num_variants=27;variants=nssv1419880,nssv1749667,nssv1749668,nssv1749669,nssv1749670,nssv1749671,nssv1749672,nssv1749673,nssv1749674,nssv1749675,nssv1749676,nssv2997093,essv57524,essv39034,essv56022,essv66578,essv76336,essv76584,essv69512,essv79193,essv63677,essv78333,essv65388,essv82685,essv70548,nssv707628,nssv707627;num_studies=5;studies=Ju2010,Sudmant2013,Cooper2011,Conrad2009,Dogan2014;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=ReadDepth,Custom_HMM,GADA;num_samples=27;samples=NA10851,HGDP01307,NA12828,HGDP00456,HGDP00998,HGDP01284,NA12749,HGDP00665,sample_nssv707628,NA18511,HGDP00521,NA12287,sample_nssv707627,NA19190,HGDP00542,HGDP01029,NA11993,NA07045,BILGI_BIOE,NA06985,HGDP00778,NA12414,NA12044,HGDP00927,NA18916,NA19240,NA12776;num_samples_tested=1552;frequency=1.74%;num_unique_samples_tested=1552;nr_frequency=1.73%;PopulationSummary=European 14:Asian 2:Mexican 0:African 8:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 1;
chr1	CNV	copy_number_variation_region	754201	754201	.	.	.	ID=gssv181;Name=gssv181;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=754201;inner_start=754201;inner_end=759100;outer_end=759100;inner_rank=8;num_variants=2;variants=nssv2997126,nssv24600;num_studies=2;studies=Perry2008,Dogan2014;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=2;samples=BILGI_BIOE,NA12740;num_samples_tested=31;frequency=6.45%;num_unique_samples_tested=31;nr_frequency=6.45%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	754201	759100	.	.	.	ID=gssv181;Name=gssv181;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=754201;inner_start=754201;inner_end=759100;outer_end=759100;inner_rank=8;num_variants=2;variants=nssv2997126,nssv24600;num_studies=2;studies=Perry2008,Dogan2014;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=2;samples=BILGI_BIOE,NA12740;num_samples_tested=31;frequency=6.45%;num_unique_samples_tested=31;nr_frequency=6.45%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	759100	759100	.	.	.	ID=gssv181;Name=gssv181;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=754201;inner_start=754201;inner_end=759100;outer_end=759100;inner_rank=8;num_variants=2;variants=nssv2997126,nssv24600;num_studies=2;studies=Perry2008,Dogan2014;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=2;samples=BILGI_BIOE,NA12740;num_samples_tested=31;frequency=6.45%;num_unique_samples_tested=31;nr_frequency=6.45%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	570056	570056	.	.	.	ID=gssv183;Name=gssv183;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=570056;inner_start=570085;inner_end=574846;outer_end=574939;inner_rank=7;num_variants=11;variants=nssv2573057,nssv2573058,nssv2573059,nssv2573060,nssv2573061,nssv2573062,nssv2573063,nssv2573064,nssv2573065,nssv2573066,essv51990;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,NA12006,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	570085	574846	.	.	.	ID=gssv183;Name=gssv183;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=570056;inner_start=570085;inner_end=574846;outer_end=574939;inner_rank=7;num_variants=11;variants=nssv2573057,nssv2573058,nssv2573059,nssv2573060,nssv2573061,nssv2573062,nssv2573063,nssv2573064,nssv2573065,nssv2573066,essv51990;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,NA12006,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	574939	574939	.	.	.	ID=gssv183;Name=gssv183;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=570056;inner_start=570085;inner_end=574846;outer_end=574939;inner_rank=7;num_variants=11;variants=nssv2573057,nssv2573058,nssv2573059,nssv2573060,nssv2573061,nssv2573062,nssv2573063,nssv2573064,nssv2573065,nssv2573066,essv51990;num_studies=2;studies=Sudmant2013,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=11;samples=HGDP01284,HGDP01307,HGDP00778,NA12006,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP00521,HGDP00998;num_samples_tested=50;frequency=22%;num_unique_samples_tested=50;nr_frequency=22%;PopulationSummary=European 3:Asian 2:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	459944	459944	.	.	.	ID=gssv185;Name=gssv185;variant_type=CNV;variant_sub_type=Gain;outer_start=459944;inner_start=459969;inner_end=463757;outer_end=464929;inner_rank=8;num_variants=11;variants=nssv18116,nssv1755744,nssv1755745,nssv1755746,nssv1755747,nssv1755748,nssv1755749,nssv1755750,nssv1755751,nssv1755752,nssv1755753;num_studies=2;studies=Perry2008,Sudmant2013;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=11;samples=HGDP01284,NA19007,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP01307,HGDP00521,HGDP00998;num_samples_tested=40;frequency=27.5%;num_unique_samples_tested=40;nr_frequency=27.5%;PopulationSummary=European 2:Asian 3:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	459969	463757	.	.	.	ID=gssv185;Name=gssv185;variant_type=CNV;variant_sub_type=Gain;outer_start=459944;inner_start=459969;inner_end=463757;outer_end=464929;inner_rank=8;num_variants=11;variants=nssv18116,nssv1755744,nssv1755745,nssv1755746,nssv1755747,nssv1755748,nssv1755749,nssv1755750,nssv1755751,nssv1755752,nssv1755753;num_studies=2;studies=Perry2008,Sudmant2013;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=11;samples=HGDP01284,NA19007,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP01307,HGDP00521,HGDP00998;num_samples_tested=40;frequency=27.5%;num_unique_samples_tested=40;nr_frequency=27.5%;PopulationSummary=European 2:Asian 3:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	464929	464929	.	.	.	ID=gssv185;Name=gssv185;variant_type=CNV;variant_sub_type=Gain;outer_start=459944;inner_start=459969;inner_end=463757;outer_end=464929;inner_rank=8;num_variants=11;variants=nssv18116,nssv1755744,nssv1755745,nssv1755746,nssv1755747,nssv1755748,nssv1755749,nssv1755750,nssv1755751,nssv1755752,nssv1755753;num_studies=2;studies=Perry2008,Sudmant2013;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=11;samples=HGDP01284,NA19007,HGDP00778,HGDP00927,HGDP00456,HGDP00542,HGDP00665,HGDP01029,HGDP01307,HGDP00521,HGDP00998;num_samples_tested=40;frequency=27.5%;num_unique_samples_tested=40;nr_frequency=27.5%;PopulationSummary=European 2:Asian 3:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 1:Turkey 0;
chr1	CNV	copy_number_variation_region	1011188	1011188	.	.	.	ID=gssv205;Name=gssv205;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1011188;inner_start=1011248;inner_end=1014701;outer_end=1014828;inner_rank=7;num_variants=14;variants=essv33453,essv83309,essv70505,essv57084,essv3586245,essv54324,essv64885,essv34297,essv46299,essv77396,essv58719,essv39943,nssv708505,nssv708506;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=14;samples=NA19190,sample_nssv708506,NA18916,sample_nssv708505,HuRef,NA19147,NA18502,NA11993,NA18511,NA19108,NA19099,NA12878,NA19240,NA19129;num_samples_tested=1541;frequency=0.91%;num_unique_samples_tested=1541;nr_frequency=0.9%;PopulationSummary=European 5:Asian 0:Mexican 0:African 9:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1011248	1014701	.	.	.	ID=gssv205;Name=gssv205;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1011188;inner_start=1011248;inner_end=1014701;outer_end=1014828;inner_rank=7;num_variants=14;variants=essv33453,essv83309,essv70505,essv57084,essv3586245,essv54324,essv64885,essv34297,essv46299,essv77396,essv58719,essv39943,nssv708505,nssv708506;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=14;samples=NA19190,sample_nssv708506,NA18916,sample_nssv708505,HuRef,NA19147,NA18502,NA11993,NA18511,NA19108,NA19099,NA12878,NA19240,NA19129;num_samples_tested=1541;frequency=0.91%;num_unique_samples_tested=1541;nr_frequency=0.9%;PopulationSummary=European 5:Asian 0:Mexican 0:African 9:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1014828	1014828	.	.	.	ID=gssv205;Name=gssv205;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1011188;inner_start=1011248;inner_end=1014701;outer_end=1014828;inner_rank=7;num_variants=14;variants=essv33453,essv83309,essv70505,essv57084,essv3586245,essv54324,essv64885,essv34297,essv46299,essv77396,essv58719,essv39943,nssv708505,nssv708506;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=14;samples=NA19190,sample_nssv708506,NA18916,sample_nssv708505,HuRef,NA19147,NA18502,NA11993,NA18511,NA19108,NA19099,NA12878,NA19240,NA19129;num_samples_tested=1541;frequency=0.91%;num_unique_samples_tested=1541;nr_frequency=0.9%;PopulationSummary=European 5:Asian 0:Mexican 0:African 9:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	723901	723901	.	.	.	ID=gssv214;Name=gssv214;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=723901;inner_start=724267;inner_end=727182;outer_end=727245;inner_rank=7;num_variants=13;variants=nssv2997115,nssv1420291,essv39478,essv37586,nssv707638,nssv707639,essv67358,nssv707633,nssv707634,nssv707635,nssv707636,nssv707637,nssv707632;num_studies=4;studies=Ju2010,Cooper2011,Conrad2009,Dogan2014;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=ReadDepth,Custom_HMM,GADA;num_samples=13;samples=NA10851,NA12828,sample_nssv707635,NA11894,sample_nssv707639,sample_nssv707638,BILGI_BIOE,sample_nssv707633,sample_nssv707632,NA12287,sample_nssv707634,sample_nssv707637,sample_nssv707636;num_samples_tested=1542;frequency=0.84%;num_unique_samples_tested=1542;nr_frequency=0.84%;PopulationSummary=European 12:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	724267	727182	.	.	.	ID=gssv214;Name=gssv214;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=723901;inner_start=724267;inner_end=727182;outer_end=727245;inner_rank=7;num_variants=13;variants=nssv2997115,nssv1420291,essv39478,essv37586,nssv707638,nssv707639,essv67358,nssv707633,nssv707634,nssv707635,nssv707636,nssv707637,nssv707632;num_studies=4;studies=Ju2010,Cooper2011,Conrad2009,Dogan2014;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=ReadDepth,Custom_HMM,GADA;num_samples=13;samples=NA10851,NA12828,sample_nssv707635,NA11894,sample_nssv707639,sample_nssv707638,BILGI_BIOE,sample_nssv707633,sample_nssv707632,NA12287,sample_nssv707634,sample_nssv707637,sample_nssv707636;num_samples_tested=1542;frequency=0.84%;num_unique_samples_tested=1542;nr_frequency=0.84%;PopulationSummary=European 12:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	727245	727245	.	.	.	ID=gssv214;Name=gssv214;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=723901;inner_start=724267;inner_end=727182;outer_end=727245;inner_rank=7;num_variants=13;variants=nssv2997115,nssv1420291,essv39478,essv37586,nssv707638,nssv707639,essv67358,nssv707633,nssv707634,nssv707635,nssv707636,nssv707637,nssv707632;num_studies=4;studies=Ju2010,Cooper2011,Conrad2009,Dogan2014;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=ReadDepth,Custom_HMM,GADA;num_samples=13;samples=NA10851,NA12828,sample_nssv707635,NA11894,sample_nssv707639,sample_nssv707638,BILGI_BIOE,sample_nssv707633,sample_nssv707632,NA12287,sample_nssv707634,sample_nssv707637,sample_nssv707636;num_samples_tested=1542;frequency=0.84%;num_unique_samples_tested=1542;nr_frequency=0.84%;PopulationSummary=European 12:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	766408	766408	.	.	.	ID=gssv219;Name=gssv219;variant_type=CNV;variant_sub_type=Loss;outer_start=766408;inner_start=766596;inner_end=769111;outer_end=769112;inner_rank=8;num_variants=232;variants=essv6695432,essv6759010,essv5403827,essv5448104,essv5451591,essv5469214,essv5500219,essv5518894,essv5519573,essv5520084,essv5523850,essv5539265,essv5557684,essv5583588,essv5590254,essv5616233,essv5632149,essv5654029,essv5707758,essv5758742,essv5781826,essv5803927,essv5809976,essv5813808,essv5900400,essv5901179,essv5935659,essv5952876,essv6021317,essv6027023,essv6030252,essv6041253,essv6047722,essv6060841,essv6064913,essv6067864,essv6137789,essv6192957,essv6276121,essv6287654,essv6295988,essv6309202,essv6345187,essv6355316,essv6418188,essv6482771,essv6509658,essv6512898,essv6542198,essv6555045,essv6563096,essv9839243,essv9839244,essv9839245,essv9839246,essv9839247,essv9839248,essv9839249,essv9839250,essv9839251,essv9839252,essv9839253,essv9839254,essv9839255,essv9839256,essv9839257,essv9839258,essv9839259,essv9839260,essv9839261,essv9839262,essv9839263,essv9839264,essv9839265,essv9839266,essv9839267,essv9839268,essv9839269,essv9839270,essv9839271,essv9839272,essv9839273,essv9839274,essv9839275,essv9839276,essv9839277,essv9839278,essv9839279,essv9839280,essv9839281,essv9839282,essv9839283,essv9839284,essv9839285,essv9839286,essv9839287,essv9839288,essv9839289,essv9839290,essv9839291,essv9839292,essv9839293,essv9839294,essv9839295,essv9839296,essv9839297,essv9839298,essv9839299,essv9839300,essv9839301,essv9839302,essv9839303,essv9839304,essv9839305,essv9839306,essv9839307,essv9839308,essv9839309,essv9839310,essv9839311,essv9839312,essv9839313,essv9839314,essv9839315,essv9839316,essv9839317,essv9839318,essv9839319,essv9839320,essv9839321,essv9839322,essv9839323,essv9839324,essv9839325,essv9839326,essv9839327,essv9839328,essv9839329,essv9839330,essv9839331,essv9839332,essv9839333,essv9839334,essv9839335,essv9839336,essv9839337,essv9839338,essv9839339,essv9839340,essv9839341,essv9839342,essv9839343,essv9839344,essv9839345,essv9839346,essv9839347,essv9839348,essv9839349,essv9839350,essv9839351,essv9839352,essv9839353,essv9839354,essv9839355,essv9839356,essv9839357,essv9839358,essv9839359,essv9839360,essv9839361,essv9839362,essv9839363,essv9839364,essv9839365,essv9839366,essv9839367,essv9839368,essv9839369,essv9839370,essv9839371,essv9839372,essv9839373,essv9839374,essv9839375,essv9839376,essv9839377,essv9839378,essv9839379,essv9839380,essv9839381,essv9839382,essv9839383,essv9839384,essv9839385,essv9839386,essv9839387,essv9839388,essv9839389,essv9839390,essv9839391,essv9839392,essv9839393,essv9839394,essv9839395,essv9839396,essv9839397,essv9839398,essv9839399,essv9839400,essv9839401,essv9839402,essv9839403,essv9839404,essv9839405,essv9839406,essv9839407,essv9839408,essv9839409,essv9839410,essv9839411,essv9839412,essv9839413,essv9839414,essv9839415,essv9839416,essv9839417,essv9839418,essv9839419,essv9839420,essv9839421,essv9839422,essv9839423;num_studies=3;studies=Wong2012b,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_GA,Multiple_NGS_Sequencing,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,RD+PEM;num_samples=195;samples=NA18564,NA18565,NA18984,NA18985,NA18560,HG02165,HG01997,HG00864,HG01848,HG01915,NA18567,NA20900,HG00620,HG03607,HG02185,HG03634,HG01794,HG03838,HG03937,HG01393,HG02839,HG00421,HG01250,HG00463,HG04214,HG02133,HG01254,NA18553,NA18552,HG01597,NA18557,NA18558,HG01858,SSM061,NA18873,HG00651,HG01341,HG04094,HG02586,HG04210,NA18972,HG02375,HG03006,HG04219,NA19074,NA19070,NA19473,HG00553,NA19079,HG00557,HG02383,HG02382,NA19655,NA20903,NA19657,HG02384,HG02140,NA18976,HG01953,HG04076,HG04176,HG03716,NA19461,NA18962,NA18964,NA18966,HG01378,NA19066,HG00409,HG03856,HG01968,NA19004,HG02391,HG02392,HG04018,HG02150,HG00513,NA19310,NA18535,NA18951,NA18952,HG00675,HG01927,HG02401,HG03844,HG03631,HG04239,HG02312,HG01204,NA18629,HG04180,HG00473,HG02884,HG01362,NA18623,HG00475,NA18620,NA18528,NA20862,HG00583,HG01807,HG01489,HG01488,NA18940,NA19058,HG03135,HG02675,HG00662,HG00663,HG02121,HG01357,HG03875,HG01350,HG02082,HG00584,HG01359,HG02086,NA19726,HG02051,HG02878,HG01054,NA19087,NA19080,NA19083,NA19747,HG01494,NA19239,HG01066,HG03890,HG01813,HG01810,HG01811,NA19011,HG00956,HG02339,HG02130,HG01947,HG01055,NA20892,HG00452,NA19729,HG01348,HG00614,NA18609,NA18608,HG00512,HG00690,NA19185,NA19755,HG02029,HG01971,NA19758,HG02025,HG01864,HG03547,HG02181,HG00608,NA18613,NA20882,HG02186,NA18595,HG01462,HG00448,HG00607,HG00313,HG03755,NA18592,NA18757,NA19762,NA18573,HG02298,NA18571,NA18570,NA19213,NA21115,NA18579,NA18999,SSM006,HG01122,HG01982,HG02408,NA19741,NA18990,NA18993,HG02052,HG01083,HG03762,HG02353,HG03824,HG03745,NA19732,NA20911,NA18749,HG02807,HG00531;num_samples_tested=3655;frequency=5.34%;num_unique_samples_tested=2658;nr_frequency=7.33%;PopulationSummary=European 1:Asian 127:Mexican 10:African 19:Admixed 0:MiddleEast 0:NativeAmerican 7:NorthAmerican 2:SouthAmerican 29:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	766596	769111	.	.	.	ID=gssv219;Name=gssv219;variant_type=CNV;variant_sub_type=Loss;outer_start=766408;inner_start=766596;inner_end=769111;outer_end=769112;inner_rank=8;num_variants=232;variants=essv6695432,essv6759010,essv5403827,essv5448104,essv5451591,essv5469214,essv5500219,essv5518894,essv5519573,essv5520084,essv5523850,essv5539265,essv5557684,essv5583588,essv5590254,essv5616233,essv5632149,essv5654029,essv5707758,essv5758742,essv5781826,essv5803927,essv5809976,essv5813808,essv5900400,essv5901179,essv5935659,essv5952876,essv6021317,essv6027023,essv6030252,essv6041253,essv6047722,essv6060841,essv6064913,essv6067864,essv6137789,essv6192957,essv6276121,essv6287654,essv6295988,essv6309202,essv6345187,essv6355316,essv6418188,essv6482771,essv6509658,essv6512898,essv6542198,essv6555045,essv6563096,essv9839243,essv9839244,essv9839245,essv9839246,essv9839247,essv9839248,essv9839249,essv9839250,essv9839251,essv9839252,essv9839253,essv9839254,essv9839255,essv9839256,essv9839257,essv9839258,essv9839259,essv9839260,essv9839261,essv9839262,essv9839263,essv9839264,essv9839265,essv9839266,essv9839267,essv9839268,essv9839269,essv9839270,essv9839271,essv9839272,essv9839273,essv9839274,essv9839275,essv9839276,essv9839277,essv9839278,essv9839279,essv9839280,essv9839281,essv9839282,essv9839283,essv9839284,essv9839285,essv9839286,essv9839287,essv9839288,essv9839289,essv9839290,essv9839291,essv9839292,essv9839293,essv9839294,essv9839295,essv9839296,essv9839297,essv9839298,essv9839299,essv9839300,essv9839301,essv9839302,essv9839303,essv9839304,essv9839305,essv9839306,essv9839307,essv9839308,essv9839309,essv9839310,essv9839311,essv9839312,essv9839313,essv9839314,essv9839315,essv9839316,essv9839317,essv9839318,essv9839319,essv9839320,essv9839321,essv9839322,essv9839323,essv9839324,essv9839325,essv9839326,essv9839327,essv9839328,essv9839329,essv9839330,essv9839331,essv9839332,essv9839333,essv9839334,essv9839335,essv9839336,essv9839337,essv9839338,essv9839339,essv9839340,essv9839341,essv9839342,essv9839343,essv9839344,essv9839345,essv9839346,essv9839347,essv9839348,essv9839349,essv9839350,essv9839351,essv9839352,essv9839353,essv9839354,essv9839355,essv9839356,essv9839357,essv9839358,essv9839359,essv9839360,essv9839361,essv9839362,essv9839363,essv9839364,essv9839365,essv9839366,essv9839367,essv9839368,essv9839369,essv9839370,essv9839371,essv9839372,essv9839373,essv9839374,essv9839375,essv9839376,essv9839377,essv9839378,essv9839379,essv9839380,essv9839381,essv9839382,essv9839383,essv9839384,essv9839385,essv9839386,essv9839387,essv9839388,essv9839389,essv9839390,essv9839391,essv9839392,essv9839393,essv9839394,essv9839395,essv9839396,essv9839397,essv9839398,essv9839399,essv9839400,essv9839401,essv9839402,essv9839403,essv9839404,essv9839405,essv9839406,essv9839407,essv9839408,essv9839409,essv9839410,essv9839411,essv9839412,essv9839413,essv9839414,essv9839415,essv9839416,essv9839417,essv9839418,essv9839419,essv9839420,essv9839421,essv9839422,essv9839423;num_studies=3;studies=Wong2012b,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_GA,Multiple_NGS_Sequencing,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,RD+PEM;num_samples=195;samples=NA18564,NA18565,NA18984,NA18985,NA18560,HG02165,HG01997,HG00864,HG01848,HG01915,NA18567,NA20900,HG00620,HG03607,HG02185,HG03634,HG01794,HG03838,HG03937,HG01393,HG02839,HG00421,HG01250,HG00463,HG04214,HG02133,HG01254,NA18553,NA18552,HG01597,NA18557,NA18558,HG01858,SSM061,NA18873,HG00651,HG01341,HG04094,HG02586,HG04210,NA18972,HG02375,HG03006,HG04219,NA19074,NA19070,NA19473,HG00553,NA19079,HG00557,HG02383,HG02382,NA19655,NA20903,NA19657,HG02384,HG02140,NA18976,HG01953,HG04076,HG04176,HG03716,NA19461,NA18962,NA18964,NA18966,HG01378,NA19066,HG00409,HG03856,HG01968,NA19004,HG02391,HG02392,HG04018,HG02150,HG00513,NA19310,NA18535,NA18951,NA18952,HG00675,HG01927,HG02401,HG03844,HG03631,HG04239,HG02312,HG01204,NA18629,HG04180,HG00473,HG02884,HG01362,NA18623,HG00475,NA18620,NA18528,NA20862,HG00583,HG01807,HG01489,HG01488,NA18940,NA19058,HG03135,HG02675,HG00662,HG00663,HG02121,HG01357,HG03875,HG01350,HG02082,HG00584,HG01359,HG02086,NA19726,HG02051,HG02878,HG01054,NA19087,NA19080,NA19083,NA19747,HG01494,NA19239,HG01066,HG03890,HG01813,HG01810,HG01811,NA19011,HG00956,HG02339,HG02130,HG01947,HG01055,NA20892,HG00452,NA19729,HG01348,HG00614,NA18609,NA18608,HG00512,HG00690,NA19185,NA19755,HG02029,HG01971,NA19758,HG02025,HG01864,HG03547,HG02181,HG00608,NA18613,NA20882,HG02186,NA18595,HG01462,HG00448,HG00607,HG00313,HG03755,NA18592,NA18757,NA19762,NA18573,HG02298,NA18571,NA18570,NA19213,NA21115,NA18579,NA18999,SSM006,HG01122,HG01982,HG02408,NA19741,NA18990,NA18993,HG02052,HG01083,HG03762,HG02353,HG03824,HG03745,NA19732,NA20911,NA18749,HG02807,HG00531;num_samples_tested=3655;frequency=5.34%;num_unique_samples_tested=2658;nr_frequency=7.33%;PopulationSummary=European 1:Asian 127:Mexican 10:African 19:Admixed 0:MiddleEast 0:NativeAmerican 7:NorthAmerican 2:SouthAmerican 29:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	769112	769112	.	.	.	ID=gssv219;Name=gssv219;variant_type=CNV;variant_sub_type=Loss;outer_start=766408;inner_start=766596;inner_end=769111;outer_end=769112;inner_rank=8;num_variants=232;variants=essv6695432,essv6759010,essv5403827,essv5448104,essv5451591,essv5469214,essv5500219,essv5518894,essv5519573,essv5520084,essv5523850,essv5539265,essv5557684,essv5583588,essv5590254,essv5616233,essv5632149,essv5654029,essv5707758,essv5758742,essv5781826,essv5803927,essv5809976,essv5813808,essv5900400,essv5901179,essv5935659,essv5952876,essv6021317,essv6027023,essv6030252,essv6041253,essv6047722,essv6060841,essv6064913,essv6067864,essv6137789,essv6192957,essv6276121,essv6287654,essv6295988,essv6309202,essv6345187,essv6355316,essv6418188,essv6482771,essv6509658,essv6512898,essv6542198,essv6555045,essv6563096,essv9839243,essv9839244,essv9839245,essv9839246,essv9839247,essv9839248,essv9839249,essv9839250,essv9839251,essv9839252,essv9839253,essv9839254,essv9839255,essv9839256,essv9839257,essv9839258,essv9839259,essv9839260,essv9839261,essv9839262,essv9839263,essv9839264,essv9839265,essv9839266,essv9839267,essv9839268,essv9839269,essv9839270,essv9839271,essv9839272,essv9839273,essv9839274,essv9839275,essv9839276,essv9839277,essv9839278,essv9839279,essv9839280,essv9839281,essv9839282,essv9839283,essv9839284,essv9839285,essv9839286,essv9839287,essv9839288,essv9839289,essv9839290,essv9839291,essv9839292,essv9839293,essv9839294,essv9839295,essv9839296,essv9839297,essv9839298,essv9839299,essv9839300,essv9839301,essv9839302,essv9839303,essv9839304,essv9839305,essv9839306,essv9839307,essv9839308,essv9839309,essv9839310,essv9839311,essv9839312,essv9839313,essv9839314,essv9839315,essv9839316,essv9839317,essv9839318,essv9839319,essv9839320,essv9839321,essv9839322,essv9839323,essv9839324,essv9839325,essv9839326,essv9839327,essv9839328,essv9839329,essv9839330,essv9839331,essv9839332,essv9839333,essv9839334,essv9839335,essv9839336,essv9839337,essv9839338,essv9839339,essv9839340,essv9839341,essv9839342,essv9839343,essv9839344,essv9839345,essv9839346,essv9839347,essv9839348,essv9839349,essv9839350,essv9839351,essv9839352,essv9839353,essv9839354,essv9839355,essv9839356,essv9839357,essv9839358,essv9839359,essv9839360,essv9839361,essv9839362,essv9839363,essv9839364,essv9839365,essv9839366,essv9839367,essv9839368,essv9839369,essv9839370,essv9839371,essv9839372,essv9839373,essv9839374,essv9839375,essv9839376,essv9839377,essv9839378,essv9839379,essv9839380,essv9839381,essv9839382,essv9839383,essv9839384,essv9839385,essv9839386,essv9839387,essv9839388,essv9839389,essv9839390,essv9839391,essv9839392,essv9839393,essv9839394,essv9839395,essv9839396,essv9839397,essv9839398,essv9839399,essv9839400,essv9839401,essv9839402,essv9839403,essv9839404,essv9839405,essv9839406,essv9839407,essv9839408,essv9839409,essv9839410,essv9839411,essv9839412,essv9839413,essv9839414,essv9839415,essv9839416,essv9839417,essv9839418,essv9839419,essv9839420,essv9839421,essv9839422,essv9839423;num_studies=3;studies=Wong2012b,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_GA,Multiple_NGS_Sequencing,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,RD+PEM;num_samples=195;samples=NA18564,NA18565,NA18984,NA18985,NA18560,HG02165,HG01997,HG00864,HG01848,HG01915,NA18567,NA20900,HG00620,HG03607,HG02185,HG03634,HG01794,HG03838,HG03937,HG01393,HG02839,HG00421,HG01250,HG00463,HG04214,HG02133,HG01254,NA18553,NA18552,HG01597,NA18557,NA18558,HG01858,SSM061,NA18873,HG00651,HG01341,HG04094,HG02586,HG04210,NA18972,HG02375,HG03006,HG04219,NA19074,NA19070,NA19473,HG00553,NA19079,HG00557,HG02383,HG02382,NA19655,NA20903,NA19657,HG02384,HG02140,NA18976,HG01953,HG04076,HG04176,HG03716,NA19461,NA18962,NA18964,NA18966,HG01378,NA19066,HG00409,HG03856,HG01968,NA19004,HG02391,HG02392,HG04018,HG02150,HG00513,NA19310,NA18535,NA18951,NA18952,HG00675,HG01927,HG02401,HG03844,HG03631,HG04239,HG02312,HG01204,NA18629,HG04180,HG00473,HG02884,HG01362,NA18623,HG00475,NA18620,NA18528,NA20862,HG00583,HG01807,HG01489,HG01488,NA18940,NA19058,HG03135,HG02675,HG00662,HG00663,HG02121,HG01357,HG03875,HG01350,HG02082,HG00584,HG01359,HG02086,NA19726,HG02051,HG02878,HG01054,NA19087,NA19080,NA19083,NA19747,HG01494,NA19239,HG01066,HG03890,HG01813,HG01810,HG01811,NA19011,HG00956,HG02339,HG02130,HG01947,HG01055,NA20892,HG00452,NA19729,HG01348,HG00614,NA18609,NA18608,HG00512,HG00690,NA19185,NA19755,HG02029,HG01971,NA19758,HG02025,HG01864,HG03547,HG02181,HG00608,NA18613,NA20882,HG02186,NA18595,HG01462,HG00448,HG00607,HG00313,HG03755,NA18592,NA18757,NA19762,NA18573,HG02298,NA18571,NA18570,NA19213,NA21115,NA18579,NA18999,SSM006,HG01122,HG01982,HG02408,NA19741,NA18990,NA18993,HG02052,HG01083,HG03762,HG02353,HG03824,HG03745,NA19732,NA20911,NA18749,HG02807,HG00531;num_samples_tested=3655;frequency=5.34%;num_unique_samples_tested=2658;nr_frequency=7.33%;PopulationSummary=European 1:Asian 127:Mexican 10:African 19:Admixed 0:MiddleEast 0:NativeAmerican 7:NorthAmerican 2:SouthAmerican 29:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1223189	1223189	.	.	.	ID=gssv225;Name=gssv225;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1223189;inner_start=1223489;inner_end=1225687;outer_end=1226049;inner_rank=3;num_variants=55;variants=essv75565,essv42462,essv4728356,essv36246,nssv585600,essv43726,essv46716,essv55374,essv39735,essv74636,essv40210,essv62731,essv70683,essv76665,essv69697,essv3586753,essv52557,essv5724624,essv5750522,essv5986658,essv6045775,essv6241397,essv54093,nssv708527,essv37720,essv5401382,essv5525996,essv5531219,essv5533551,essv5623068,essv5694543,essv5696611,essv5708918,essv5726926,essv5788928,essv5809142,essv5875613,essv5890008,essv5937287,essv6020785,essv6026600,essv6056692,essv6122868,essv6143211,essv6148801,essv6168843,essv6219805,essv6332366,essv6333919,essv6374239,essv6379654,essv6442990,essv6448568,essv6555436,essv9743979;num_studies=7;studies=Pang2010,Cooper2011,Boomsma2014,Kidd2010b,Conrad2009,Bentley2008,1000GenomesPhase1;num_platforms=6;platforms=Custom_Illumina_1.2M,Illumina_HiSeq,Illumina_II_IIX_HiSeq,NimbleGen42M,SangerSequencing,Illumina_GA;num_algorithms=5;algorithms=PEM,PEM+ReadDepth+SplitRead,Custom_HMM,GADA,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=53;samples=NA18853,NA20586,HG00613,NA18523,n/a,sample_nssv708527,HG00543,NA19834,HG00442,NA19462,NA18909,NA18907,NA19346,HuRef,HG00581,NA19448,NA19213,NA18511,HG00501,NA19722,NA12878,NA19088,NA19257,HG01055,NA12287,HG01079,NA18632,HG01198,NA15510,HG01060,sample_essv9743979,NA19625,NA19056,NA12044,NA18870,NA11994,NA19398,NA18508,HG01342,NA19439,NA12004,NA12414,NA18916,NA12006,HG00136,NA20542,NA20332,NA18507,NA19099,NA18505,NA19129,NA19452,NA19451;num_samples_tested=3373;frequency=1.57%;num_unique_samples_tested=3326;nr_frequency=1.59%;PopulationSummary=European 13:Asian 8:Mexican 1:African 24:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1223489	1225687	.	.	.	ID=gssv225;Name=gssv225;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1223189;inner_start=1223489;inner_end=1225687;outer_end=1226049;inner_rank=3;num_variants=55;variants=essv75565,essv42462,essv4728356,essv36246,nssv585600,essv43726,essv46716,essv55374,essv39735,essv74636,essv40210,essv62731,essv70683,essv76665,essv69697,essv3586753,essv52557,essv5724624,essv5750522,essv5986658,essv6045775,essv6241397,essv54093,nssv708527,essv37720,essv5401382,essv5525996,essv5531219,essv5533551,essv5623068,essv5694543,essv5696611,essv5708918,essv5726926,essv5788928,essv5809142,essv5875613,essv5890008,essv5937287,essv6020785,essv6026600,essv6056692,essv6122868,essv6143211,essv6148801,essv6168843,essv6219805,essv6332366,essv6333919,essv6374239,essv6379654,essv6442990,essv6448568,essv6555436,essv9743979;num_studies=7;studies=Pang2010,Cooper2011,Boomsma2014,Kidd2010b,Conrad2009,Bentley2008,1000GenomesPhase1;num_platforms=6;platforms=Custom_Illumina_1.2M,Illumina_HiSeq,Illumina_II_IIX_HiSeq,NimbleGen42M,SangerSequencing,Illumina_GA;num_algorithms=5;algorithms=PEM,PEM+ReadDepth+SplitRead,Custom_HMM,GADA,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=53;samples=NA18853,NA20586,HG00613,NA18523,n/a,sample_nssv708527,HG00543,NA19834,HG00442,NA19462,NA18909,NA18907,NA19346,HuRef,HG00581,NA19448,NA19213,NA18511,HG00501,NA19722,NA12878,NA19088,NA19257,HG01055,NA12287,HG01079,NA18632,HG01198,NA15510,HG01060,sample_essv9743979,NA19625,NA19056,NA12044,NA18870,NA11994,NA19398,NA18508,HG01342,NA19439,NA12004,NA12414,NA18916,NA12006,HG00136,NA20542,NA20332,NA18507,NA19099,NA18505,NA19129,NA19452,NA19451;num_samples_tested=3373;frequency=1.57%;num_unique_samples_tested=3326;nr_frequency=1.59%;PopulationSummary=European 13:Asian 8:Mexican 1:African 24:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1226049	1226049	.	.	.	ID=gssv225;Name=gssv225;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1223189;inner_start=1223489;inner_end=1225687;outer_end=1226049;inner_rank=3;num_variants=55;variants=essv75565,essv42462,essv4728356,essv36246,nssv585600,essv43726,essv46716,essv55374,essv39735,essv74636,essv40210,essv62731,essv70683,essv76665,essv69697,essv3586753,essv52557,essv5724624,essv5750522,essv5986658,essv6045775,essv6241397,essv54093,nssv708527,essv37720,essv5401382,essv5525996,essv5531219,essv5533551,essv5623068,essv5694543,essv5696611,essv5708918,essv5726926,essv5788928,essv5809142,essv5875613,essv5890008,essv5937287,essv6020785,essv6026600,essv6056692,essv6122868,essv6143211,essv6148801,essv6168843,essv6219805,essv6332366,essv6333919,essv6374239,essv6379654,essv6442990,essv6448568,essv6555436,essv9743979;num_studies=7;studies=Pang2010,Cooper2011,Boomsma2014,Kidd2010b,Conrad2009,Bentley2008,1000GenomesPhase1;num_platforms=6;platforms=Custom_Illumina_1.2M,Illumina_HiSeq,Illumina_II_IIX_HiSeq,NimbleGen42M,SangerSequencing,Illumina_GA;num_algorithms=5;algorithms=PEM,PEM+ReadDepth+SplitRead,Custom_HMM,GADA,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=53;samples=NA18853,NA20586,HG00613,NA18523,n/a,sample_nssv708527,HG00543,NA19834,HG00442,NA19462,NA18909,NA18907,NA19346,HuRef,HG00581,NA19448,NA19213,NA18511,HG00501,NA19722,NA12878,NA19088,NA19257,HG01055,NA12287,HG01079,NA18632,HG01198,NA15510,HG01060,sample_essv9743979,NA19625,NA19056,NA12044,NA18870,NA11994,NA19398,NA18508,HG01342,NA19439,NA12004,NA12414,NA18916,NA12006,HG00136,NA20542,NA20332,NA18507,NA19099,NA18505,NA19129,NA19452,NA19451;num_samples_tested=3373;frequency=1.57%;num_unique_samples_tested=3326;nr_frequency=1.59%;PopulationSummary=European 13:Asian 8:Mexican 1:African 24:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 5:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	724300	724300	.	.	.	ID=gssv237;Name=gssv237;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=724300;inner_start=724678;inner_end=726700;outer_end=726794;inner_rank=7;num_variants=33;variants=nssv707646,nssv707647,nssv707644,nssv707645,nssv707631,nssv707643,nssv707663,nssv707664,nssv707665,nssv707666,nssv707667,nssv707668,nssv707669,nssv707670,nssv707671,essv52724,nssv707640,nssv707641,nssv707642,nssv707649,nssv707650,nssv707651,nssv707652,nssv707653,nssv707654,nssv707655,nssv707656,nssv707657,nssv707658,nssv707659,nssv707660,nssv707661,nssv707662;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=33;samples=sample_nssv707666,sample_nssv707667,sample_nssv707664,sample_nssv707665,sample_nssv707662,sample_nssv707663,sample_nssv707660,sample_nssv707661,sample_nssv707644,sample_nssv707645,sample_nssv707646,sample_nssv707647,sample_nssv707640,sample_nssv707641,sample_nssv707668,sample_nssv707643,sample_nssv707649,sample_nssv707659,sample_nssv707658,sample_nssv707671,sample_nssv707670,sample_nssv707653,sample_nssv707652,sample_nssv707651,sample_nssv707650,sample_nssv707657,sample_nssv707656,sample_nssv707655,sample_nssv707654,sample_nssv707642,sample_nssv707669,NA12006,sample_nssv707631;num_samples_tested=1540;frequency=2.14%;num_unique_samples_tested=1540;nr_frequency=2.14%;PopulationSummary=European 33:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	724678	726700	.	.	.	ID=gssv237;Name=gssv237;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=724300;inner_start=724678;inner_end=726700;outer_end=726794;inner_rank=7;num_variants=33;variants=nssv707646,nssv707647,nssv707644,nssv707645,nssv707631,nssv707643,nssv707663,nssv707664,nssv707665,nssv707666,nssv707667,nssv707668,nssv707669,nssv707670,nssv707671,essv52724,nssv707640,nssv707641,nssv707642,nssv707649,nssv707650,nssv707651,nssv707652,nssv707653,nssv707654,nssv707655,nssv707656,nssv707657,nssv707658,nssv707659,nssv707660,nssv707661,nssv707662;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=33;samples=sample_nssv707666,sample_nssv707667,sample_nssv707664,sample_nssv707665,sample_nssv707662,sample_nssv707663,sample_nssv707660,sample_nssv707661,sample_nssv707644,sample_nssv707645,sample_nssv707646,sample_nssv707647,sample_nssv707640,sample_nssv707641,sample_nssv707668,sample_nssv707643,sample_nssv707649,sample_nssv707659,sample_nssv707658,sample_nssv707671,sample_nssv707670,sample_nssv707653,sample_nssv707652,sample_nssv707651,sample_nssv707650,sample_nssv707657,sample_nssv707656,sample_nssv707655,sample_nssv707654,sample_nssv707642,sample_nssv707669,NA12006,sample_nssv707631;num_samples_tested=1540;frequency=2.14%;num_unique_samples_tested=1540;nr_frequency=2.14%;PopulationSummary=European 33:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	726794	726794	.	.	.	ID=gssv237;Name=gssv237;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=724300;inner_start=724678;inner_end=726700;outer_end=726794;inner_rank=7;num_variants=33;variants=nssv707646,nssv707647,nssv707644,nssv707645,nssv707631,nssv707643,nssv707663,nssv707664,nssv707665,nssv707666,nssv707667,nssv707668,nssv707669,nssv707670,nssv707671,essv52724,nssv707640,nssv707641,nssv707642,nssv707649,nssv707650,nssv707651,nssv707652,nssv707653,nssv707654,nssv707655,nssv707656,nssv707657,nssv707658,nssv707659,nssv707660,nssv707661,nssv707662;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=33;samples=sample_nssv707666,sample_nssv707667,sample_nssv707664,sample_nssv707665,sample_nssv707662,sample_nssv707663,sample_nssv707660,sample_nssv707661,sample_nssv707644,sample_nssv707645,sample_nssv707646,sample_nssv707647,sample_nssv707640,sample_nssv707641,sample_nssv707668,sample_nssv707643,sample_nssv707649,sample_nssv707659,sample_nssv707658,sample_nssv707671,sample_nssv707670,sample_nssv707653,sample_nssv707652,sample_nssv707651,sample_nssv707650,sample_nssv707657,sample_nssv707656,sample_nssv707655,sample_nssv707654,sample_nssv707642,sample_nssv707669,NA12006,sample_nssv707631;num_samples_tested=1540;frequency=2.14%;num_unique_samples_tested=1540;nr_frequency=2.14%;PopulationSummary=European 33:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1443538	1443538	.	.	.	ID=gssv238;Name=gssv238;variant_type=CNV;variant_sub_type=Loss;outer_start=1443538;inner_start=1443542;inner_end=1445749;outer_end=1445764;inner_rank=8;num_variants=129;variants=essv9840836,essv9840837,essv9840838,essv9840839,essv9840840,essv9840841,essv9840842,essv9840843,essv9840844,essv9840845,essv9840846,essv9840847,essv9840848,essv9840849,essv9840850,essv9840851,essv9840852,essv9840853,essv9840854,essv9840855,essv9840856,essv9840857,essv9840858,essv9840859,essv9840860,essv9840861,essv9840862,essv9840863,essv9840864,essv9840865,essv9840866,essv9840867,essv9840868,essv9840869,essv9840870,essv9840871,essv9840872,essv9840873,essv9840874,essv9840875,essv9840876,essv9840877,essv9840878,essv9840879,essv9840880,essv9840881,essv9840882,essv9840883,essv9840884,essv9840885,essv9840886,essv9840887,essv9840888,essv9840889,essv9840890,essv9840891,essv9840892,essv9840893,essv9840894,essv9840895,essv9840896,essv9840897,essv9840898,essv9840899,essv9840900,essv9840901,essv9840902,essv9840903,essv9840904,essv9840905,essv9840906,essv9840907,essv9840908,essv9840909,essv9840910,essv9840911,essv9840912,essv9840913,essv9840914,essv9840915,essv9840916,essv9840917,essv9840918,essv9840919,essv9840920,essv9840921,essv9840922,essv9840923,essv9840924,essv9840925,essv9840926,essv9840927,essv9840928,essv9840929,essv9840930,essv9840931,essv9840932,essv9840933,essv9840934,essv9840935,essv9840936,essv9840937,essv9840938,essv9840939,essv9840940,essv9840941,essv9840942,essv9840943,essv5405437,essv5626254,essv5627421,essv5685136,essv5716610,essv5885089,essv5913103,essv5950686,essv5958348,essv6056791,essv6068180,essv6107643,essv6135295,essv6148352,essv6161076,essv6274829,essv6343375,essv6427354,essv6474698,essv6564617,essv6588406;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=112;samples=HG03270,HG03271,HG03442,NA20294,HG01443,HG03372,HG00146,NA19351,NA19449,NA19444,NA19446,NA20348,HG02938,NA19117,HG02580,HG03085,NA19175,NA19701,HG01140,HG02583,NA18486,HG03166,HG03697,HG03162,NA18488,HG01269,HG03169,NA19435,NA20356,NA19474,HG03095,NA19141,HG02620,NA19146,HG02484,NA19384,NA19381,HG03460,NA19467,HG01271,NA20351,NA18499,HG01075,HG02854,HG02851,NA19371,NA19376,NA19374,HG03301,HG03303,NA19318,NA19315,NA19317,NA19313,NA19395,NA19390,HG03224,HG03499,HG02968,HG01390,HG01360,NA19093,NA19031,NA19328,NA19327,HG01958,HG02489,HG03567,HG02772,HG02678,HG01956,HG01082,HG03130,HG02588,HG02879,HG02971,HG02973,NA19159,NA19028,NA19020,HG02337,HG03129,HG01108,HG03120,NA19430,NA18939,HG03127,NA19247,NA19185,HG03117,HG03112,HG03055,NA19429,NA18923,HG03297,HG02420,NA19130,NA19131,NA18517,NA18516,NA20126,NA19138,HG03428,HG02648,HG02642,HG02053,HG03439,HG02455,NA18505,NA19456,NA19454,HG02807;num_samples_tested=3559;frequency=3.15%;num_unique_samples_tested=2562;nr_frequency=4.37%;PopulationSummary=European 1:Asian 3:Mexican 0:African 99:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 9:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1443542	1445749	.	.	.	ID=gssv238;Name=gssv238;variant_type=CNV;variant_sub_type=Loss;outer_start=1443538;inner_start=1443542;inner_end=1445749;outer_end=1445764;inner_rank=8;num_variants=129;variants=essv9840836,essv9840837,essv9840838,essv9840839,essv9840840,essv9840841,essv9840842,essv9840843,essv9840844,essv9840845,essv9840846,essv9840847,essv9840848,essv9840849,essv9840850,essv9840851,essv9840852,essv9840853,essv9840854,essv9840855,essv9840856,essv9840857,essv9840858,essv9840859,essv9840860,essv9840861,essv9840862,essv9840863,essv9840864,essv9840865,essv9840866,essv9840867,essv9840868,essv9840869,essv9840870,essv9840871,essv9840872,essv9840873,essv9840874,essv9840875,essv9840876,essv9840877,essv9840878,essv9840879,essv9840880,essv9840881,essv9840882,essv9840883,essv9840884,essv9840885,essv9840886,essv9840887,essv9840888,essv9840889,essv9840890,essv9840891,essv9840892,essv9840893,essv9840894,essv9840895,essv9840896,essv9840897,essv9840898,essv9840899,essv9840900,essv9840901,essv9840902,essv9840903,essv9840904,essv9840905,essv9840906,essv9840907,essv9840908,essv9840909,essv9840910,essv9840911,essv9840912,essv9840913,essv9840914,essv9840915,essv9840916,essv9840917,essv9840918,essv9840919,essv9840920,essv9840921,essv9840922,essv9840923,essv9840924,essv9840925,essv9840926,essv9840927,essv9840928,essv9840929,essv9840930,essv9840931,essv9840932,essv9840933,essv9840934,essv9840935,essv9840936,essv9840937,essv9840938,essv9840939,essv9840940,essv9840941,essv9840942,essv9840943,essv5405437,essv5626254,essv5627421,essv5685136,essv5716610,essv5885089,essv5913103,essv5950686,essv5958348,essv6056791,essv6068180,essv6107643,essv6135295,essv6148352,essv6161076,essv6274829,essv6343375,essv6427354,essv6474698,essv6564617,essv6588406;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=112;samples=HG03270,HG03271,HG03442,NA20294,HG01443,HG03372,HG00146,NA19351,NA19449,NA19444,NA19446,NA20348,HG02938,NA19117,HG02580,HG03085,NA19175,NA19701,HG01140,HG02583,NA18486,HG03166,HG03697,HG03162,NA18488,HG01269,HG03169,NA19435,NA20356,NA19474,HG03095,NA19141,HG02620,NA19146,HG02484,NA19384,NA19381,HG03460,NA19467,HG01271,NA20351,NA18499,HG01075,HG02854,HG02851,NA19371,NA19376,NA19374,HG03301,HG03303,NA19318,NA19315,NA19317,NA19313,NA19395,NA19390,HG03224,HG03499,HG02968,HG01390,HG01360,NA19093,NA19031,NA19328,NA19327,HG01958,HG02489,HG03567,HG02772,HG02678,HG01956,HG01082,HG03130,HG02588,HG02879,HG02971,HG02973,NA19159,NA19028,NA19020,HG02337,HG03129,HG01108,HG03120,NA19430,NA18939,HG03127,NA19247,NA19185,HG03117,HG03112,HG03055,NA19429,NA18923,HG03297,HG02420,NA19130,NA19131,NA18517,NA18516,NA20126,NA19138,HG03428,HG02648,HG02642,HG02053,HG03439,HG02455,NA18505,NA19456,NA19454,HG02807;num_samples_tested=3559;frequency=3.15%;num_unique_samples_tested=2562;nr_frequency=4.37%;PopulationSummary=European 1:Asian 3:Mexican 0:African 99:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 9:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1445764	1445764	.	.	.	ID=gssv238;Name=gssv238;variant_type=CNV;variant_sub_type=Loss;outer_start=1443538;inner_start=1443542;inner_end=1445749;outer_end=1445764;inner_rank=8;num_variants=129;variants=essv9840836,essv9840837,essv9840838,essv9840839,essv9840840,essv9840841,essv9840842,essv9840843,essv9840844,essv9840845,essv9840846,essv9840847,essv9840848,essv9840849,essv9840850,essv9840851,essv9840852,essv9840853,essv9840854,essv9840855,essv9840856,essv9840857,essv9840858,essv9840859,essv9840860,essv9840861,essv9840862,essv9840863,essv9840864,essv9840865,essv9840866,essv9840867,essv9840868,essv9840869,essv9840870,essv9840871,essv9840872,essv9840873,essv9840874,essv9840875,essv9840876,essv9840877,essv9840878,essv9840879,essv9840880,essv9840881,essv9840882,essv9840883,essv9840884,essv9840885,essv9840886,essv9840887,essv9840888,essv9840889,essv9840890,essv9840891,essv9840892,essv9840893,essv9840894,essv9840895,essv9840896,essv9840897,essv9840898,essv9840899,essv9840900,essv9840901,essv9840902,essv9840903,essv9840904,essv9840905,essv9840906,essv9840907,essv9840908,essv9840909,essv9840910,essv9840911,essv9840912,essv9840913,essv9840914,essv9840915,essv9840916,essv9840917,essv9840918,essv9840919,essv9840920,essv9840921,essv9840922,essv9840923,essv9840924,essv9840925,essv9840926,essv9840927,essv9840928,essv9840929,essv9840930,essv9840931,essv9840932,essv9840933,essv9840934,essv9840935,essv9840936,essv9840937,essv9840938,essv9840939,essv9840940,essv9840941,essv9840942,essv9840943,essv5405437,essv5626254,essv5627421,essv5685136,essv5716610,essv5885089,essv5913103,essv5950686,essv5958348,essv6056791,essv6068180,essv6107643,essv6135295,essv6148352,essv6161076,essv6274829,essv6343375,essv6427354,essv6474698,essv6564617,essv6588406;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=112;samples=HG03270,HG03271,HG03442,NA20294,HG01443,HG03372,HG00146,NA19351,NA19449,NA19444,NA19446,NA20348,HG02938,NA19117,HG02580,HG03085,NA19175,NA19701,HG01140,HG02583,NA18486,HG03166,HG03697,HG03162,NA18488,HG01269,HG03169,NA19435,NA20356,NA19474,HG03095,NA19141,HG02620,NA19146,HG02484,NA19384,NA19381,HG03460,NA19467,HG01271,NA20351,NA18499,HG01075,HG02854,HG02851,NA19371,NA19376,NA19374,HG03301,HG03303,NA19318,NA19315,NA19317,NA19313,NA19395,NA19390,HG03224,HG03499,HG02968,HG01390,HG01360,NA19093,NA19031,NA19328,NA19327,HG01958,HG02489,HG03567,HG02772,HG02678,HG01956,HG01082,HG03130,HG02588,HG02879,HG02971,HG02973,NA19159,NA19028,NA19020,HG02337,HG03129,HG01108,HG03120,NA19430,NA18939,HG03127,NA19247,NA19185,HG03117,HG03112,HG03055,NA19429,NA18923,HG03297,HG02420,NA19130,NA19131,NA18517,NA18516,NA20126,NA19138,HG03428,HG02648,HG02642,HG02053,HG03439,HG02455,NA18505,NA19456,NA19454,HG02807;num_samples_tested=3559;frequency=3.15%;num_unique_samples_tested=2562;nr_frequency=4.37%;PopulationSummary=European 1:Asian 3:Mexican 0:African 99:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 9:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1522874	1522874	.	.	.	ID=gssv246;Name=gssv246;variant_type=CNV;variant_sub_type=Loss;outer_start=1522874;inner_start=1522875;inner_end=1524673;outer_end=1524674;inner_rank=8;num_variants=35;variants=essv9840960,essv9840961,essv9840962,essv9840963,essv9840964,essv9840965,essv9840966,essv9840967,essv9840968,essv9840969,essv9840970,essv9840971,essv9840972,essv9840973,essv9840974,essv9840975,essv9840976,essv9840977,essv9840978,essv9840979,essv9840980,essv9840981,essv9840982,essv9840983,essv9840984,essv9840985,essv9840986,essv9840987,essv9840988,essv5934228,essv5993482,essv6133147,essv6444599,essv6471016,essv6564666;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=30;samples=NA19184,HG03198,NA19225,HG03190,NA20291,HG01958,HG01912,NA19834,NA20412,NA19428,HG03133,HG02420,NA19210,NA20348,HG03583,NA19338,HG03300,NA19319,NA19041,HG03268,NA19172,HG03478,NA18871,HG02318,HG02944,NA19382,HG03162,NA18853,NA19457,HG02489;num_samples_tested=3559;frequency=0.84%;num_unique_samples_tested=2562;nr_frequency=1.17%;PopulationSummary=European 0:Asian 0:Mexican 0:African 30:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1522875	1524673	.	.	.	ID=gssv246;Name=gssv246;variant_type=CNV;variant_sub_type=Loss;outer_start=1522874;inner_start=1522875;inner_end=1524673;outer_end=1524674;inner_rank=8;num_variants=35;variants=essv9840960,essv9840961,essv9840962,essv9840963,essv9840964,essv9840965,essv9840966,essv9840967,essv9840968,essv9840969,essv9840970,essv9840971,essv9840972,essv9840973,essv9840974,essv9840975,essv9840976,essv9840977,essv9840978,essv9840979,essv9840980,essv9840981,essv9840982,essv9840983,essv9840984,essv9840985,essv9840986,essv9840987,essv9840988,essv5934228,essv5993482,essv6133147,essv6444599,essv6471016,essv6564666;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=30;samples=NA19184,HG03198,NA19225,HG03190,NA20291,HG01958,HG01912,NA19834,NA20412,NA19428,HG03133,HG02420,NA19210,NA20348,HG03583,NA19338,HG03300,NA19319,NA19041,HG03268,NA19172,HG03478,NA18871,HG02318,HG02944,NA19382,HG03162,NA18853,NA19457,HG02489;num_samples_tested=3559;frequency=0.84%;num_unique_samples_tested=2562;nr_frequency=1.17%;PopulationSummary=European 0:Asian 0:Mexican 0:African 30:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1524674	1524674	.	.	.	ID=gssv246;Name=gssv246;variant_type=CNV;variant_sub_type=Loss;outer_start=1522874;inner_start=1522875;inner_end=1524673;outer_end=1524674;inner_rank=8;num_variants=35;variants=essv9840960,essv9840961,essv9840962,essv9840963,essv9840964,essv9840965,essv9840966,essv9840967,essv9840968,essv9840969,essv9840970,essv9840971,essv9840972,essv9840973,essv9840974,essv9840975,essv9840976,essv9840977,essv9840978,essv9840979,essv9840980,essv9840981,essv9840982,essv9840983,essv9840984,essv9840985,essv9840986,essv9840987,essv9840988,essv5934228,essv5993482,essv6133147,essv6444599,essv6471016,essv6564666;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=30;samples=NA19184,HG03198,NA19225,HG03190,NA20291,HG01958,HG01912,NA19834,NA20412,NA19428,HG03133,HG02420,NA19210,NA20348,HG03583,NA19338,HG03300,NA19319,NA19041,HG03268,NA19172,HG03478,NA18871,HG02318,HG02944,NA19382,HG03162,NA18853,NA19457,HG02489;num_samples_tested=3559;frequency=0.84%;num_unique_samples_tested=2562;nr_frequency=1.17%;PopulationSummary=European 0:Asian 0:Mexican 0:African 30:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1285180	1285180	.	.	.	ID=gssv253;Name=gssv253;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1285180;inner_start=1285392;inner_end=1286912;outer_end=1287127;inner_rank=7;num_variants=33;variants=nssv708573,nssv708574,nssv708575,nssv708576,nssv626309,essv3586390,essv47575,essv55653,essv58568,essv61574,essv63174,essv67618,essv70184,essv76381,essv81540,essv77749,essv34406,essv41760,essv43560,essv46311,essv50204,essv53270,nssv708562,nssv708563,nssv708564,nssv708565,nssv708566,nssv708567,nssv708568,nssv708569,nssv708570,nssv708571,nssv708572;num_studies=4;studies=Arlt2010,Pang2010,Conrad2009,Cooper2011;num_platforms=3;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=3;algorithms=PEM,Custom_HMM,GADA;num_samples=33;samples=sample_nssv708564,sample_nssv708565,sample_nssv708566,sample_nssv708567,NA18861,sample_nssv708562,sample_nssv708563,sample_nssv708568,sample_nssv708569,NA18909,HuRef,NA18517,NA19114,HGMDFN090,NA15510,sample_nssv708573,sample_nssv708572,sample_nssv708571,NA12239,sample_nssv708576,sample_nssv708575,sample_nssv708574,NA06985,NA18508,NA18858,NA12414,NA18916,NA18502,sample_nssv708570,NA19108,NA19099,NA18505,NA19129;num_samples_tested=1542;frequency=2.14%;num_unique_samples_tested=1542;nr_frequency=2.14%;PopulationSummary=European 20:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1285392	1286912	.	.	.	ID=gssv253;Name=gssv253;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1285180;inner_start=1285392;inner_end=1286912;outer_end=1287127;inner_rank=7;num_variants=33;variants=nssv708573,nssv708574,nssv708575,nssv708576,nssv626309,essv3586390,essv47575,essv55653,essv58568,essv61574,essv63174,essv67618,essv70184,essv76381,essv81540,essv77749,essv34406,essv41760,essv43560,essv46311,essv50204,essv53270,nssv708562,nssv708563,nssv708564,nssv708565,nssv708566,nssv708567,nssv708568,nssv708569,nssv708570,nssv708571,nssv708572;num_studies=4;studies=Arlt2010,Pang2010,Conrad2009,Cooper2011;num_platforms=3;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=3;algorithms=PEM,Custom_HMM,GADA;num_samples=33;samples=sample_nssv708564,sample_nssv708565,sample_nssv708566,sample_nssv708567,NA18861,sample_nssv708562,sample_nssv708563,sample_nssv708568,sample_nssv708569,NA18909,HuRef,NA18517,NA19114,HGMDFN090,NA15510,sample_nssv708573,sample_nssv708572,sample_nssv708571,NA12239,sample_nssv708576,sample_nssv708575,sample_nssv708574,NA06985,NA18508,NA18858,NA12414,NA18916,NA18502,sample_nssv708570,NA19108,NA19099,NA18505,NA19129;num_samples_tested=1542;frequency=2.14%;num_unique_samples_tested=1542;nr_frequency=2.14%;PopulationSummary=European 20:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1287127	1287127	.	.	.	ID=gssv253;Name=gssv253;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1285180;inner_start=1285392;inner_end=1286912;outer_end=1287127;inner_rank=7;num_variants=33;variants=nssv708573,nssv708574,nssv708575,nssv708576,nssv626309,essv3586390,essv47575,essv55653,essv58568,essv61574,essv63174,essv67618,essv70184,essv76381,essv81540,essv77749,essv34406,essv41760,essv43560,essv46311,essv50204,essv53270,nssv708562,nssv708563,nssv708564,nssv708565,nssv708566,nssv708567,nssv708568,nssv708569,nssv708570,nssv708571,nssv708572;num_studies=4;studies=Arlt2010,Pang2010,Conrad2009,Cooper2011;num_platforms=3;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=3;algorithms=PEM,Custom_HMM,GADA;num_samples=33;samples=sample_nssv708564,sample_nssv708565,sample_nssv708566,sample_nssv708567,NA18861,sample_nssv708562,sample_nssv708563,sample_nssv708568,sample_nssv708569,NA18909,HuRef,NA18517,NA19114,HGMDFN090,NA15510,sample_nssv708573,sample_nssv708572,sample_nssv708571,NA12239,sample_nssv708576,sample_nssv708575,sample_nssv708574,NA06985,NA18508,NA18858,NA12414,NA18916,NA18502,sample_nssv708570,NA19108,NA19099,NA18505,NA19129;num_samples_tested=1542;frequency=2.14%;num_unique_samples_tested=1542;nr_frequency=2.14%;PopulationSummary=European 20:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	869249	869249	.	.	.	ID=gssv255;Name=gssv255;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869249;inner_start=869250;inner_end=870625;outer_end=870860;inner_rank=8;num_variants=11;variants=nssv626307,nssv707793,nssv707794,nssv707795,nssv707796,nssv707797,nssv707798,nssv707799,nssv707800,nssv707801,essv9749534;num_studies=3;studies=Arlt2010,Boomsma2014,Cooper2011;num_platforms=3;platforms=Illumina_GA,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=PEM,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=11;samples=sample_nssv707793,HGMDFN090,sample_nssv707796,sample_nssv707797,sample_nssv707794,sample_nssv707795,sample_nssv707798,sample_nssv707799,sample_nssv707800,sample_nssv707801,sample_essv9749534;num_samples_tested=2268;frequency=0.49%;num_unique_samples_tested=2268;nr_frequency=0.48%;PopulationSummary=European 11:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	869250	870625	.	.	.	ID=gssv255;Name=gssv255;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869249;inner_start=869250;inner_end=870625;outer_end=870860;inner_rank=8;num_variants=11;variants=nssv626307,nssv707793,nssv707794,nssv707795,nssv707796,nssv707797,nssv707798,nssv707799,nssv707800,nssv707801,essv9749534;num_studies=3;studies=Arlt2010,Boomsma2014,Cooper2011;num_platforms=3;platforms=Illumina_GA,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=PEM,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=11;samples=sample_nssv707793,HGMDFN090,sample_nssv707796,sample_nssv707797,sample_nssv707794,sample_nssv707795,sample_nssv707798,sample_nssv707799,sample_nssv707800,sample_nssv707801,sample_essv9749534;num_samples_tested=2268;frequency=0.49%;num_unique_samples_tested=2268;nr_frequency=0.48%;PopulationSummary=European 11:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	870860	870860	.	.	.	ID=gssv255;Name=gssv255;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869249;inner_start=869250;inner_end=870625;outer_end=870860;inner_rank=8;num_variants=11;variants=nssv626307,nssv707793,nssv707794,nssv707795,nssv707796,nssv707797,nssv707798,nssv707799,nssv707800,nssv707801,essv9749534;num_studies=3;studies=Arlt2010,Boomsma2014,Cooper2011;num_platforms=3;platforms=Illumina_GA,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=3;algorithms=PEM,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=11;samples=sample_nssv707793,HGMDFN090,sample_nssv707796,sample_nssv707797,sample_nssv707794,sample_nssv707795,sample_nssv707798,sample_nssv707799,sample_nssv707800,sample_nssv707801,sample_essv9749534;num_samples_tested=2268;frequency=0.49%;num_unique_samples_tested=2268;nr_frequency=0.48%;PopulationSummary=European 11:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	546414	546414	.	.	.	ID=gssv258;Name=gssv258;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=546414;inner_start=546523;inner_end=547895;outer_end=547937;inner_rank=7;num_variants=5;variants=nssv14769,nssv18120,nssv21447,essv64244,essv44179;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,NimbleGen42M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=5;samples=NA07045,NA12740,NA12489,NA19221,NA19132;num_samples_tested=70;frequency=7.14%;num_unique_samples_tested=67;nr_frequency=7.46%;PopulationSummary=European 3:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	546523	547895	.	.	.	ID=gssv258;Name=gssv258;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=546414;inner_start=546523;inner_end=547895;outer_end=547937;inner_rank=7;num_variants=5;variants=nssv14769,nssv18120,nssv21447,essv64244,essv44179;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,NimbleGen42M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=5;samples=NA07045,NA12740,NA12489,NA19221,NA19132;num_samples_tested=70;frequency=7.14%;num_unique_samples_tested=67;nr_frequency=7.46%;PopulationSummary=European 3:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	547937	547937	.	.	.	ID=gssv258;Name=gssv258;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=546414;inner_start=546523;inner_end=547895;outer_end=547937;inner_rank=7;num_variants=5;variants=nssv14769,nssv18120,nssv21447,essv64244,essv44179;num_studies=2;studies=Perry2008,Conrad2009;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,NimbleGen42M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=5;samples=NA07045,NA12740,NA12489,NA19221,NA19132;num_samples_tested=70;frequency=7.14%;num_unique_samples_tested=67;nr_frequency=7.46%;PopulationSummary=European 3:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	136181	136181	.	.	.	ID=gssv274;Name=gssv274;variant_type=CNV;variant_sub_type=Loss;outer_start=136181;inner_start=136281;inner_end=137326;outer_end=137326;inner_rank=7;num_variants=3;variants=essv3586083,essv69266,essv73333;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=3;samples=NA12044,HuRef,NA12156;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	136281	137326	.	.	.	ID=gssv274;Name=gssv274;variant_type=CNV;variant_sub_type=Loss;outer_start=136181;inner_start=136281;inner_end=137326;outer_end=137326;inner_rank=7;num_variants=3;variants=essv3586083,essv69266,essv73333;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=3;samples=NA12044,HuRef,NA12156;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	137326	137326	.	.	.	ID=gssv274;Name=gssv274;variant_type=CNV;variant_sub_type=Loss;outer_start=136181;inner_start=136281;inner_end=137326;outer_end=137326;inner_rank=7;num_variants=3;variants=essv3586083,essv69266,essv73333;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=3;samples=NA12044,HuRef,NA12156;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1540850	1540850	.	.	.	ID=gssv276;Name=gssv276;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1540850;inner_start=1540957;inner_end=1541895;outer_end=1541970;inner_rank=7;num_variants=7;variants=essv3586347,essv40494,nssv708600,nssv708601,essv70538,nssv708602,essv51898;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=7;samples=NA18916,sample_nssv708601,sample_nssv708600,sample_nssv708602,HuRef,NA12878,NA12006;num_samples_tested=1541;frequency=0.45%;num_unique_samples_tested=1541;nr_frequency=0.45%;PopulationSummary=European 6:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1540957	1541895	.	.	.	ID=gssv276;Name=gssv276;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1540850;inner_start=1540957;inner_end=1541895;outer_end=1541970;inner_rank=7;num_variants=7;variants=essv3586347,essv40494,nssv708600,nssv708601,essv70538,nssv708602,essv51898;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=7;samples=NA18916,sample_nssv708601,sample_nssv708600,sample_nssv708602,HuRef,NA12878,NA12006;num_samples_tested=1541;frequency=0.45%;num_unique_samples_tested=1541;nr_frequency=0.45%;PopulationSummary=European 6:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1541970	1541970	.	.	.	ID=gssv276;Name=gssv276;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1540850;inner_start=1540957;inner_end=1541895;outer_end=1541970;inner_rank=7;num_variants=7;variants=essv3586347,essv40494,nssv708600,nssv708601,essv70538,nssv708602,essv51898;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=7;samples=NA18916,sample_nssv708601,sample_nssv708600,sample_nssv708602,HuRef,NA12878,NA12006;num_samples_tested=1541;frequency=0.45%;num_unique_samples_tested=1541;nr_frequency=0.45%;PopulationSummary=European 6:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	869310	869310	.	.	.	ID=gssv281;Name=gssv281;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869310;inner_start=869459;inner_end=870458;outer_end=870645;inner_rank=7;num_variants=59;variants=nssv708347,nssv708348,nssv708349,nssv708350,nssv708351,nssv708352,nssv708353,nssv708354,nssv708355,nssv708356,nssv708357,nssv708358,nssv708359,nssv708360,nssv708361,nssv708362,nssv708363,nssv708364,nssv708365,nssv708366,nssv708367,nssv708410,essv43529,essv45759,essv58180,essv68737,essv34096,essv3586109,essv36398,essv36634,essv39448,essv40569,essv41839,essv44303,essv47005,essv48682,essv49479,essv51610,essv52404,essv52984,essv55498,essv56260,essv57554,essv60716,essv61133,essv63145,essv63924,essv67398,essv71436,essv72095,essv73216,essv74988,essv75965,essv77133,essv78363,essv82528,essv84124,essv32263,essv38639;num_studies=3;studies=Conrad2009,Cooper2011,Pang2010;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=59;samples=sample_nssv708348,sample_nssv708349,sample_nssv708360,sample_nssv708361,sample_nssv708366,sample_nssv708367,sample_nssv708364,sample_nssv708365,NA18523,NA19225,NA11894,NA19190,NA19147,sample_nssv708347,NA12489,sample_nssv708362,sample_nssv708410,NA07037,NA12156,NA18909,NA18907,NA12828,HuRef,NA18517,NA18511,NA11993,sample_nssv708363,NA19257,NA12287,NA19114,sample_nssv708357,sample_nssv708356,sample_nssv708355,sample_nssv708354,sample_nssv708353,sample_nssv708352,sample_nssv708351,sample_nssv708350,NA15510,sample_nssv708359,sample_nssv708358,NA12878,NA07045,NA12239,NA11931,NA06985,NA18508,NA18858,NA12004,NA12414,NA12006,NA18916,NA18502,NA19108,NA19099,NA18505,NA18861,NA19129,NA12776;num_samples_tested=1541;frequency=3.83%;num_unique_samples_tested=1541;nr_frequency=3.82%;PopulationSummary=European 39:Asian 0:Mexican 0:African 19:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	869459	870458	.	.	.	ID=gssv281;Name=gssv281;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869310;inner_start=869459;inner_end=870458;outer_end=870645;inner_rank=7;num_variants=59;variants=nssv708347,nssv708348,nssv708349,nssv708350,nssv708351,nssv708352,nssv708353,nssv708354,nssv708355,nssv708356,nssv708357,nssv708358,nssv708359,nssv708360,nssv708361,nssv708362,nssv708363,nssv708364,nssv708365,nssv708366,nssv708367,nssv708410,essv43529,essv45759,essv58180,essv68737,essv34096,essv3586109,essv36398,essv36634,essv39448,essv40569,essv41839,essv44303,essv47005,essv48682,essv49479,essv51610,essv52404,essv52984,essv55498,essv56260,essv57554,essv60716,essv61133,essv63145,essv63924,essv67398,essv71436,essv72095,essv73216,essv74988,essv75965,essv77133,essv78363,essv82528,essv84124,essv32263,essv38639;num_studies=3;studies=Conrad2009,Cooper2011,Pang2010;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=59;samples=sample_nssv708348,sample_nssv708349,sample_nssv708360,sample_nssv708361,sample_nssv708366,sample_nssv708367,sample_nssv708364,sample_nssv708365,NA18523,NA19225,NA11894,NA19190,NA19147,sample_nssv708347,NA12489,sample_nssv708362,sample_nssv708410,NA07037,NA12156,NA18909,NA18907,NA12828,HuRef,NA18517,NA18511,NA11993,sample_nssv708363,NA19257,NA12287,NA19114,sample_nssv708357,sample_nssv708356,sample_nssv708355,sample_nssv708354,sample_nssv708353,sample_nssv708352,sample_nssv708351,sample_nssv708350,NA15510,sample_nssv708359,sample_nssv708358,NA12878,NA07045,NA12239,NA11931,NA06985,NA18508,NA18858,NA12004,NA12414,NA12006,NA18916,NA18502,NA19108,NA19099,NA18505,NA18861,NA19129,NA12776;num_samples_tested=1541;frequency=3.83%;num_unique_samples_tested=1541;nr_frequency=3.82%;PopulationSummary=European 39:Asian 0:Mexican 0:African 19:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	870645	870645	.	.	.	ID=gssv281;Name=gssv281;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869310;inner_start=869459;inner_end=870458;outer_end=870645;inner_rank=7;num_variants=59;variants=nssv708347,nssv708348,nssv708349,nssv708350,nssv708351,nssv708352,nssv708353,nssv708354,nssv708355,nssv708356,nssv708357,nssv708358,nssv708359,nssv708360,nssv708361,nssv708362,nssv708363,nssv708364,nssv708365,nssv708366,nssv708367,nssv708410,essv43529,essv45759,essv58180,essv68737,essv34096,essv3586109,essv36398,essv36634,essv39448,essv40569,essv41839,essv44303,essv47005,essv48682,essv49479,essv51610,essv52404,essv52984,essv55498,essv56260,essv57554,essv60716,essv61133,essv63145,essv63924,essv67398,essv71436,essv72095,essv73216,essv74988,essv75965,essv77133,essv78363,essv82528,essv84124,essv32263,essv38639;num_studies=3;studies=Conrad2009,Cooper2011,Pang2010;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=59;samples=sample_nssv708348,sample_nssv708349,sample_nssv708360,sample_nssv708361,sample_nssv708366,sample_nssv708367,sample_nssv708364,sample_nssv708365,NA18523,NA19225,NA11894,NA19190,NA19147,sample_nssv708347,NA12489,sample_nssv708362,sample_nssv708410,NA07037,NA12156,NA18909,NA18907,NA12828,HuRef,NA18517,NA18511,NA11993,sample_nssv708363,NA19257,NA12287,NA19114,sample_nssv708357,sample_nssv708356,sample_nssv708355,sample_nssv708354,sample_nssv708353,sample_nssv708352,sample_nssv708351,sample_nssv708350,NA15510,sample_nssv708359,sample_nssv708358,NA12878,NA07045,NA12239,NA11931,NA06985,NA18508,NA18858,NA12004,NA12414,NA12006,NA18916,NA18502,NA19108,NA19099,NA18505,NA18861,NA19129,NA12776;num_samples_tested=1541;frequency=3.83%;num_unique_samples_tested=1541;nr_frequency=3.82%;PopulationSummary=European 39:Asian 0:Mexican 0:African 19:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1649620	1649620	.	.	.	ID=gssv284;Name=gssv284;variant_type=CNV;variant_sub_type=Loss;outer_start=1649620;inner_start=1649621;inner_end=1650651;outer_end=1650677;inner_rank=1;num_variants=68;variants=essv9841509,essv9841510,essv9841511,essv9841512,essv9841513,essv9841514,essv9841515,essv9841516,essv9841517,essv9841518,essv9841519,essv9841520,essv9841521,essv9841522,essv9841523,essv9841524,essv9841525,essv9841526,essv9841527,essv9841528,essv9841529,essv9841530,essv9841531,essv9841532,essv9841533,essv9841534,essv9841535,essv9841536,essv9841537,essv9841538,essv9841539,essv9841540,essv9841541,essv9841542,essv9841543,essv9841544,essv9841545,essv9841546,essv9841547,essv9841548,essv9841549,essv9841550,essv9841551,essv9841552,essv9841553,essv9841554,essv9841555,essv9841556,essv9841557,essv9841558,essv9841559,essv9841560,essv9841561,essv9841562,essv9841563,essv9841564,essv9841565,essv9841566,essv9841567,essv9841568,essv9841569,essv9841570,essv9841571,essv9841572,essv9841573,essv9841574,nssv178640,nssv3000429;num_studies=3;studies=Mills2006,1000GenomesPhase3,Dogan2014;num_platforms=3;platforms=Illumina_HiSeq,Multiple_NGS_Sequencing,SangerSequencing;num_algorithms=3;algorithms=PEM,RD+PEM,SplitRead;num_samples=68;samples=HG02383,NA20581,NA18647,HG00259,HG02282,NA19777,HG02026,n/a,NA18976,HG02057,NA12750,HG00310,HG02128,NA20804,HG02047,HG01889,HG02558,HG01794,HG02837,HG03681,HG04229,HG01501,HG02164,HG03757,HG01757,HG03858,HG03976,NA18632,NA20362,HG03899,HG03730,NA21135,NA19792,HG02032,HG00851,NA12144,NA18957,HG01122,BILGI_BIOE,HG02601,HG02134,NA12751,HG02073,HG03781,HG02490,HG03803,HG02728,HG02239,HG03945,HG03696,HG01431,HG01784,NA20518,HG00155,HG04026,HG03745,NA20512,NA20508,HG00479,HG01064,NA19070,HG01182,NA20544,NA12718,HG03967,HG01188,HG04176,NA18620;num_samples_tested=2529;frequency=2.69%;num_unique_samples_tested=2529;nr_frequency=2.68%;PopulationSummary=European 17:Asian 36:Mexican 2:African 5:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 1:SouthAmerican 4:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1649621	1650651	.	.	.	ID=gssv284;Name=gssv284;variant_type=CNV;variant_sub_type=Loss;outer_start=1649620;inner_start=1649621;inner_end=1650651;outer_end=1650677;inner_rank=1;num_variants=68;variants=essv9841509,essv9841510,essv9841511,essv9841512,essv9841513,essv9841514,essv9841515,essv9841516,essv9841517,essv9841518,essv9841519,essv9841520,essv9841521,essv9841522,essv9841523,essv9841524,essv9841525,essv9841526,essv9841527,essv9841528,essv9841529,essv9841530,essv9841531,essv9841532,essv9841533,essv9841534,essv9841535,essv9841536,essv9841537,essv9841538,essv9841539,essv9841540,essv9841541,essv9841542,essv9841543,essv9841544,essv9841545,essv9841546,essv9841547,essv9841548,essv9841549,essv9841550,essv9841551,essv9841552,essv9841553,essv9841554,essv9841555,essv9841556,essv9841557,essv9841558,essv9841559,essv9841560,essv9841561,essv9841562,essv9841563,essv9841564,essv9841565,essv9841566,essv9841567,essv9841568,essv9841569,essv9841570,essv9841571,essv9841572,essv9841573,essv9841574,nssv178640,nssv3000429;num_studies=3;studies=Mills2006,1000GenomesPhase3,Dogan2014;num_platforms=3;platforms=Illumina_HiSeq,Multiple_NGS_Sequencing,SangerSequencing;num_algorithms=3;algorithms=PEM,RD+PEM,SplitRead;num_samples=68;samples=HG02383,NA20581,NA18647,HG00259,HG02282,NA19777,HG02026,n/a,NA18976,HG02057,NA12750,HG00310,HG02128,NA20804,HG02047,HG01889,HG02558,HG01794,HG02837,HG03681,HG04229,HG01501,HG02164,HG03757,HG01757,HG03858,HG03976,NA18632,NA20362,HG03899,HG03730,NA21135,NA19792,HG02032,HG00851,NA12144,NA18957,HG01122,BILGI_BIOE,HG02601,HG02134,NA12751,HG02073,HG03781,HG02490,HG03803,HG02728,HG02239,HG03945,HG03696,HG01431,HG01784,NA20518,HG00155,HG04026,HG03745,NA20512,NA20508,HG00479,HG01064,NA19070,HG01182,NA20544,NA12718,HG03967,HG01188,HG04176,NA18620;num_samples_tested=2529;frequency=2.69%;num_unique_samples_tested=2529;nr_frequency=2.68%;PopulationSummary=European 17:Asian 36:Mexican 2:African 5:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 1:SouthAmerican 4:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1650677	1650677	.	.	.	ID=gssv284;Name=gssv284;variant_type=CNV;variant_sub_type=Loss;outer_start=1649620;inner_start=1649621;inner_end=1650651;outer_end=1650677;inner_rank=1;num_variants=68;variants=essv9841509,essv9841510,essv9841511,essv9841512,essv9841513,essv9841514,essv9841515,essv9841516,essv9841517,essv9841518,essv9841519,essv9841520,essv9841521,essv9841522,essv9841523,essv9841524,essv9841525,essv9841526,essv9841527,essv9841528,essv9841529,essv9841530,essv9841531,essv9841532,essv9841533,essv9841534,essv9841535,essv9841536,essv9841537,essv9841538,essv9841539,essv9841540,essv9841541,essv9841542,essv9841543,essv9841544,essv9841545,essv9841546,essv9841547,essv9841548,essv9841549,essv9841550,essv9841551,essv9841552,essv9841553,essv9841554,essv9841555,essv9841556,essv9841557,essv9841558,essv9841559,essv9841560,essv9841561,essv9841562,essv9841563,essv9841564,essv9841565,essv9841566,essv9841567,essv9841568,essv9841569,essv9841570,essv9841571,essv9841572,essv9841573,essv9841574,nssv178640,nssv3000429;num_studies=3;studies=Mills2006,1000GenomesPhase3,Dogan2014;num_platforms=3;platforms=Illumina_HiSeq,Multiple_NGS_Sequencing,SangerSequencing;num_algorithms=3;algorithms=PEM,RD+PEM,SplitRead;num_samples=68;samples=HG02383,NA20581,NA18647,HG00259,HG02282,NA19777,HG02026,n/a,NA18976,HG02057,NA12750,HG00310,HG02128,NA20804,HG02047,HG01889,HG02558,HG01794,HG02837,HG03681,HG04229,HG01501,HG02164,HG03757,HG01757,HG03858,HG03976,NA18632,NA20362,HG03899,HG03730,NA21135,NA19792,HG02032,HG00851,NA12144,NA18957,HG01122,BILGI_BIOE,HG02601,HG02134,NA12751,HG02073,HG03781,HG02490,HG03803,HG02728,HG02239,HG03945,HG03696,HG01431,HG01784,NA20518,HG00155,HG04026,HG03745,NA20512,NA20508,HG00479,HG01064,NA19070,HG01182,NA20544,NA12718,HG03967,HG01188,HG04176,NA18620;num_samples_tested=2529;frequency=2.69%;num_unique_samples_tested=2529;nr_frequency=2.68%;PopulationSummary=European 17:Asian 36:Mexican 2:African 5:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 1:SouthAmerican 4:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1034317	1034317	.	.	.	ID=gssv290;Name=gssv290;variant_type=CNV;variant_sub_type=Gain;outer_start=1034317;inner_start=1034418;inner_end=1035210;outer_end=1035340;inner_rank=7;num_variants=30;variants=essv67101,essv41179,essv55845,essv33282,essv34833,essv3586664,essv36026,essv37967,essv43569,essv45621,essv47880,essv50641,essv52757,essv59557,essv68366,essv71219,essv72970,essv78447,essv79482,essv81648,essv76157,essv55633,essv59316,essv65289,essv77145,nssv708509,nssv708510,nssv708511,nssv708512,nssv708513;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=30;samples=NA12828,NA19225,NA18523,NA19147,sample_nssv708512,NA18861,NA18909,NA18907,NA12749,HuRef,NA18517,NA18511,NA19257,NA19114,sample_nssv708511,sample_nssv708510,sample_nssv708513,sample_nssv708509,NA06985,NA18508,NA18858,NA19240,NA12414,NA18916,NA18502,NA19108,NA19099,NA18505,NA19129,NA12776;num_samples_tested=1541;frequency=1.95%;num_unique_samples_tested=1541;nr_frequency=1.94%;PopulationSummary=European 11:Asian 0:Mexican 0:African 19:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1034418	1035210	.	.	.	ID=gssv290;Name=gssv290;variant_type=CNV;variant_sub_type=Gain;outer_start=1034317;inner_start=1034418;inner_end=1035210;outer_end=1035340;inner_rank=7;num_variants=30;variants=essv67101,essv41179,essv55845,essv33282,essv34833,essv3586664,essv36026,essv37967,essv43569,essv45621,essv47880,essv50641,essv52757,essv59557,essv68366,essv71219,essv72970,essv78447,essv79482,essv81648,essv76157,essv55633,essv59316,essv65289,essv77145,nssv708509,nssv708510,nssv708511,nssv708512,nssv708513;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=30;samples=NA12828,NA19225,NA18523,NA19147,sample_nssv708512,NA18861,NA18909,NA18907,NA12749,HuRef,NA18517,NA18511,NA19257,NA19114,sample_nssv708511,sample_nssv708510,sample_nssv708513,sample_nssv708509,NA06985,NA18508,NA18858,NA19240,NA12414,NA18916,NA18502,NA19108,NA19099,NA18505,NA19129,NA12776;num_samples_tested=1541;frequency=1.95%;num_unique_samples_tested=1541;nr_frequency=1.94%;PopulationSummary=European 11:Asian 0:Mexican 0:African 19:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1035340	1035340	.	.	.	ID=gssv290;Name=gssv290;variant_type=CNV;variant_sub_type=Gain;outer_start=1034317;inner_start=1034418;inner_end=1035210;outer_end=1035340;inner_rank=7;num_variants=30;variants=essv67101,essv41179,essv55845,essv33282,essv34833,essv3586664,essv36026,essv37967,essv43569,essv45621,essv47880,essv50641,essv52757,essv59557,essv68366,essv71219,essv72970,essv78447,essv79482,essv81648,essv76157,essv55633,essv59316,essv65289,essv77145,nssv708509,nssv708510,nssv708511,nssv708512,nssv708513;num_studies=3;studies=Pang2010,Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=30;samples=NA12828,NA19225,NA18523,NA19147,sample_nssv708512,NA18861,NA18909,NA18907,NA12749,HuRef,NA18517,NA18511,NA19257,NA19114,sample_nssv708511,sample_nssv708510,sample_nssv708513,sample_nssv708509,NA06985,NA18508,NA18858,NA19240,NA12414,NA18916,NA18502,NA19108,NA19099,NA18505,NA19129,NA12776;num_samples_tested=1541;frequency=1.95%;num_unique_samples_tested=1541;nr_frequency=1.94%;PopulationSummary=European 11:Asian 0:Mexican 0:African 19:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	947113	947113	.	.	.	ID=gssv292;Name=gssv292;variant_type=CNV;variant_sub_type=Loss;outer_start=947113;inner_start=947116;inner_end=948002;outer_end=948003;inner_rank=8;num_variants=7;variants=essv9839576,essv9839577,essv9839578,essv9839579,essv5634163,essv6062495,essv6082937;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=NA19307,NA19401,NA19359,NA19338,HG02546;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	947116	948002	.	.	.	ID=gssv292;Name=gssv292;variant_type=CNV;variant_sub_type=Loss;outer_start=947113;inner_start=947116;inner_end=948002;outer_end=948003;inner_rank=8;num_variants=7;variants=essv9839576,essv9839577,essv9839578,essv9839579,essv5634163,essv6062495,essv6082937;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=NA19307,NA19401,NA19359,NA19338,HG02546;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	948003	948003	.	.	.	ID=gssv292;Name=gssv292;variant_type=CNV;variant_sub_type=Loss;outer_start=947113;inner_start=947116;inner_end=948002;outer_end=948003;inner_rank=8;num_variants=7;variants=essv9839576,essv9839577,essv9839578,essv9839579,essv5634163,essv6062495,essv6082937;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=NA19307,NA19401,NA19359,NA19338,HG02546;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	869443	869443	.	.	.	ID=gssv294;Name=gssv294;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869443;inner_start=869521;inner_end=870309;outer_end=870324;inner_rank=2;num_variants=371;variants=nssv707712,nssv707713,nssv707714,nssv707715,nssv707716,nssv707717,nssv707718,nssv707719,nssv707720,nssv707721,nssv707722,nssv707723,nssv707724,nssv707725,nssv707726,nssv707727,nssv707728,nssv707729,nssv707730,nssv707731,nssv707732,nssv707733,nssv707734,nssv707735,nssv707736,nssv707737,nssv707738,nssv707739,nssv707740,nssv707741,nssv707742,nssv707743,nssv707744,nssv707745,nssv707746,nssv707747,nssv707748,nssv707749,nssv707750,nssv707751,nssv707752,nssv707753,nssv707754,nssv707755,nssv707756,nssv707757,nssv707758,nssv707759,nssv707760,nssv707761,nssv707762,nssv707763,nssv707764,nssv707765,nssv707766,nssv707767,nssv707768,nssv707769,nssv707770,nssv707771,nssv707772,nssv707773,nssv707774,nssv707775,nssv707776,nssv707777,nssv707778,nssv707779,nssv707780,nssv707781,nssv707782,nssv707783,nssv707784,nssv707785,nssv707786,nssv707787,nssv707788,nssv707789,nssv707790,nssv707791,nssv707792,nssv707707,nssv707708,nssv707709,nssv707710,nssv707711,nssv707809,nssv707810,nssv707811,nssv707812,nssv707813,nssv707814,nssv707815,nssv707808,nssv708104,nssv708105,nssv708106,nssv708107,nssv708108,nssv708109,nssv708110,nssv708111,nssv708112,nssv708113,nssv708114,nssv708115,nssv708116,nssv708117,nssv708118,nssv708119,nssv708120,nssv708121,nssv708122,nssv708123,nssv708124,nssv708125,nssv708126,nssv708127,nssv708128,nssv708129,nssv708130,nssv708131,nssv708132,nssv708133,nssv708134,nssv708135,nssv708136,nssv708137,nssv708138,nssv708139,nssv708140,nssv708141,nssv708142,nssv708143,nssv708144,nssv708145,nssv708146,nssv708147,nssv708148,nssv708149,nssv708150,nssv708151,nssv708152,nssv708153,nssv708154,nssv708155,nssv708156,nssv708157,nssv708158,nssv708159,nssv708160,nssv708161,nssv708162,nssv708163,nssv708164,nssv708165,nssv708166,nssv708167,nssv708168,nssv708169,nssv708170,nssv708171,nssv708172,nssv708173,nssv708174,nssv708175,nssv708176,nssv708177,nssv708178,nssv708179,nssv708180,nssv708181,nssv708182,nssv708183,nssv708184,nssv708185,nssv708186,nssv708187,nssv708188,nssv708189,nssv708190,nssv708191,nssv708192,nssv708193,nssv708194,nssv708195,nssv708196,nssv708197,nssv708198,nssv708199,nssv708200,nssv708201,nssv708202,nssv708203,nssv708204,nssv708205,nssv708206,nssv708207,nssv708208,nssv708209,nssv708210,nssv708211,nssv708212,nssv708213,nssv708214,nssv708215,nssv708216,nssv708217,nssv708218,nssv708219,nssv708220,nssv708221,nssv708222,nssv708223,nssv708224,nssv708225,nssv708226,nssv708227,nssv708228,nssv708229,nssv708230,nssv708231,nssv708232,nssv708233,nssv708234,nssv708235,nssv708236,nssv708237,nssv708238,nssv708239,nssv708240,nssv708241,nssv708242,nssv708243,nssv708244,nssv708245,nssv708246,nssv708247,nssv708248,nssv708249,nssv708250,nssv708251,nssv708252,nssv708253,nssv708254,nssv708255,nssv708256,nssv708257,nssv708258,nssv708259,nssv708260,nssv708261,nssv708262,nssv708263,nssv708264,nssv708265,nssv708266,nssv708267,nssv708268,nssv708269,nssv708270,nssv708271,nssv708272,nssv708273,nssv708274,nssv708275,nssv708276,nssv708277,nssv708278,nssv708279,nssv708280,nssv708281,nssv708282,nssv708283,nssv708284,nssv708285,nssv708286,nssv708287,nssv708288,nssv708289,nssv708290,nssv708291,nssv708292,nssv708293,nssv708294,nssv708295,nssv708296,nssv708297,nssv708298,nssv708299,nssv708300,nssv708301,nssv708302,nssv708303,nssv708304,nssv708305,nssv708306,nssv708307,nssv708308,nssv708309,nssv708310,nssv708311,nssv708312,nssv708313,nssv708314,nssv708315,nssv708316,nssv708317,nssv708318,nssv708319,nssv708320,nssv708321,nssv708322,nssv708323,nssv708324,nssv708325,nssv708326,nssv708327,nssv708328,nssv708329,nssv708330,nssv708331,nssv708332,nssv708333,nssv708334,nssv708335,nssv708336,nssv708337,nssv708338,nssv708339,nssv708340,nssv708341,nssv708342,nssv708343,nssv708344,nssv708345,nssv708346,nssv3000435,essv4275138,nssv708097,nssv708098,nssv708099,nssv708100,nssv708101,nssv708102,nssv708103,nssv708393,nssv708394,nssv708395,nssv708396,nssv708397,nssv708398,nssv708399,nssv708400,nssv708401,nssv708402,nssv708403,nssv708404,nssv708405,nssv708406,nssv708407,nssv708408,nssv708409,nssv707807,nssv707706,nssv708387,nssv708388,nssv708389,nssv708390,nssv708391,nssv708392;num_studies=3;studies=Levy2007,Cooper2011,Dogan2014;num_platforms=3;platforms=Custom_Illumina_1.2M,SangerSequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM,Custom_HMM,AssemblyComparison;num_samples=371;samples=sample_nssv707745,sample_nssv707744,sample_nssv707747,sample_nssv707746,sample_nssv707741,sample_nssv707740,sample_nssv707743,sample_nssv707742,sample_nssv707749,sample_nssv707748,sample_nssv708304,sample_nssv708305,sample_nssv708306,sample_nssv708307,sample_nssv708300,sample_nssv708301,sample_nssv708302,sample_nssv708303,sample_nssv708308,sample_nssv708309,sample_nssv708399,sample_nssv708398,sample_nssv708393,sample_nssv708392,sample_nssv708391,sample_nssv708390,sample_nssv708397,sample_nssv708396,sample_nssv708395,sample_nssv708394,sample_nssv708278,sample_nssv708279,sample_nssv708270,sample_nssv708271,sample_nssv708272,sample_nssv708273,sample_nssv708274,sample_nssv708275,sample_nssv708276,sample_nssv708277,sample_nssv707778,sample_nssv707779,HuRef,sample_nssv707774,sample_nssv707775,sample_nssv707776,sample_nssv707777,sample_nssv707770,sample_nssv707771,sample_nssv708193,sample_nssv708192,sample_nssv708188,sample_nssv708189,sample_nssv708186,sample_nssv708187,sample_nssv708184,sample_nssv708185,sample_nssv708182,sample_nssv708183,sample_nssv708180,sample_nssv708181,sample_nssv708115,sample_nssv708114,sample_nssv708117,sample_nssv708116,sample_nssv708111,sample_nssv708110,sample_nssv708113,sample_nssv708112,sample_nssv708119,sample_nssv708118,sample_nssv708339,sample_nssv708338,sample_nssv708335,sample_nssv708334,sample_nssv708337,sample_nssv708336,sample_nssv708331,sample_nssv708330,sample_nssv708333,sample_nssv708332,sample_nssv708234,sample_nssv708235,sample_nssv708236,sample_nssv708237,sample_nssv708230,sample_nssv708231,sample_nssv708232,sample_nssv708233,sample_nssv708238,sample_nssv708239,sample_nssv707718,sample_nssv707719,sample_nssv707712,sample_nssv707713,sample_nssv707710,sample_nssv707711,sample_nssv707716,sample_nssv707717,sample_nssv707714,sample_nssv707715,sample_nssv708241,sample_nssv708240,sample_nssv708243,sample_nssv708242,sample_nssv708245,sample_nssv708244,sample_nssv708247,sample_nssv708246,sample_nssv708249,sample_nssv708248,sample_nssv707808,sample_nssv707809,sample_nssv707807,sample_nssv708148,sample_nssv708149,sample_nssv708142,sample_nssv708143,sample_nssv708140,sample_nssv708141,sample_nssv708146,sample_nssv708147,sample_nssv708144,sample_nssv708145,sample_nssv707756,sample_nssv707757,sample_nssv707754,sample_nssv707755,sample_nssv707752,sample_nssv707753,sample_nssv707750,sample_nssv707751,sample_nssv707758,sample_nssv707759,sample_nssv708388,sample_nssv708389,sample_nssv708387,sample_nssv707730,sample_nssv708209,sample_nssv708208,sample_nssv707731,sample_nssv708205,sample_nssv708204,sample_nssv708207,sample_nssv708206,sample_nssv708201,sample_nssv708200,sample_nssv708203,sample_nssv708202,sample_nssv708106,sample_nssv708107,sample_nssv708104,sample_nssv708105,sample_nssv708102,sample_nssv708103,sample_nssv708100,sample_nssv708101,sample_nssv708108,sample_nssv708109,sample_nssv708328,sample_nssv708329,sample_nssv708326,sample_nssv708327,sample_nssv708324,sample_nssv708325,sample_nssv708322,sample_nssv708323,sample_nssv708320,sample_nssv708321,sample_nssv707729,sample_nssv707728,sample_nssv707727,sample_nssv707726,sample_nssv707725,sample_nssv707724,sample_nssv707723,sample_nssv707722,sample_nssv707721,sample_nssv707720,sample_nssv708252,sample_nssv708253,sample_nssv708250,sample_nssv708251,sample_nssv708256,sample_nssv708257,sample_nssv708254,sample_nssv708255,sample_nssv708258,sample_nssv708259,sample_nssv708403,sample_nssv708179,sample_nssv708178,sample_nssv708177,sample_nssv708176,sample_nssv708175,sample_nssv708174,sample_nssv708173,sample_nssv708172,sample_nssv708171,sample_nssv708170,sample_nssv708402,sample_nssv707769,sample_nssv707768,sample_nssv707763,sample_nssv707762,sample_nssv707761,sample_nssv707760,sample_nssv707767,sample_nssv707766,sample_nssv707765,sample_nssv707764,sample_nssv708400,sample_nssv708218,sample_nssv708219,sample_nssv708216,sample_nssv708217,sample_nssv708214,sample_nssv708215,sample_nssv708212,sample_nssv708213,sample_nssv708210,sample_nssv708211,BILGI_BIOE,sample_nssv708285,sample_nssv708284,sample_nssv708287,sample_nssv708286,sample_nssv708281,sample_nssv708280,sample_nssv708283,sample_nssv708282,sample_nssv708406,sample_nssv708289,sample_nssv708288,sample_nssv707781,sample_nssv707780,sample_nssv707783,sample_nssv707782,sample_nssv707785,sample_nssv707784,sample_nssv707787,sample_nssv707786,sample_nssv707789,sample_nssv707788,sample_nssv708139,sample_nssv708138,sample_nssv708133,sample_nssv708132,sample_nssv708131,sample_nssv708130,sample_nssv708137,sample_nssv708136,sample_nssv708135,sample_nssv708134,sample_nssv708098,sample_nssv708099,sample_nssv707732,sample_nssv707733,sample_nssv707734,sample_nssv707735,sample_nssv707736,sample_nssv707737,sample_nssv707738,sample_nssv707739,sample_nssv708097,sample_nssv708313,sample_nssv708312,sample_nssv708311,sample_nssv708310,sample_nssv708317,sample_nssv708316,sample_nssv708315,sample_nssv708314,sample_nssv708319,sample_nssv708318,sample_nssv708267,sample_nssv708266,sample_nssv708265,sample_nssv708264,sample_nssv708263,sample_nssv708262,sample_nssv708261,sample_nssv708260,sample_nssv708269,sample_nssv708268,sample_nssv708199,sample_nssv708198,sample_nssv708195,sample_nssv708194,sample_nssv708197,sample_nssv708196,sample_nssv708191,sample_nssv708190,sample_nssv707772,sample_nssv707773,sample_nssv708160,sample_nssv708161,sample_nssv708162,sample_nssv708163,sample_nssv708164,sample_nssv708165,sample_nssv708166,sample_nssv708167,sample_nssv708168,sample_nssv708169,sample_nssv708340,sample_nssv708341,sample_nssv708342,sample_nssv708343,sample_nssv708344,sample_nssv708345,sample_nssv708346,sample_nssv708223,sample_nssv708222,sample_nssv708221,sample_nssv708220,sample_nssv708227,sample_nssv708226,sample_nssv708225,sample_nssv708224,sample_nssv708229,sample_nssv708228,sample_nssv708401,sample_nssv708296,sample_nssv708297,sample_nssv708294,sample_nssv708295,sample_nssv708292,sample_nssv708293,sample_nssv708290,sample_nssv708291,sample_nssv708407,sample_nssv708298,sample_nssv708299,sample_nssv707709,sample_nssv707708,sample_nssv708405,sample_nssv708404,sample_nssv707707,sample_nssv707706,sample_nssv707792,sample_nssv707790,sample_nssv707791,sample_nssv707815,sample_nssv707814,sample_nssv707811,sample_nssv707810,sample_nssv707813,sample_nssv707812,sample_nssv708159,sample_nssv708158,sample_nssv708409,sample_nssv708408,sample_nssv708151,sample_nssv708150,sample_nssv708153,sample_nssv708152,sample_nssv708155,sample_nssv708154,sample_nssv708157,sample_nssv708156,sample_nssv708128,sample_nssv708129,sample_nssv708124,sample_nssv708125,sample_nssv708126,sample_nssv708127,sample_nssv708120,sample_nssv708121,sample_nssv708122,sample_nssv708123;num_samples_tested=1502;frequency=24.7%;num_unique_samples_tested=1502;nr_frequency=24.7%;PopulationSummary=European 370:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	869521	870309	.	.	.	ID=gssv294;Name=gssv294;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869443;inner_start=869521;inner_end=870309;outer_end=870324;inner_rank=2;num_variants=371;variants=nssv707712,nssv707713,nssv707714,nssv707715,nssv707716,nssv707717,nssv707718,nssv707719,nssv707720,nssv707721,nssv707722,nssv707723,nssv707724,nssv707725,nssv707726,nssv707727,nssv707728,nssv707729,nssv707730,nssv707731,nssv707732,nssv707733,nssv707734,nssv707735,nssv707736,nssv707737,nssv707738,nssv707739,nssv707740,nssv707741,nssv707742,nssv707743,nssv707744,nssv707745,nssv707746,nssv707747,nssv707748,nssv707749,nssv707750,nssv707751,nssv707752,nssv707753,nssv707754,nssv707755,nssv707756,nssv707757,nssv707758,nssv707759,nssv707760,nssv707761,nssv707762,nssv707763,nssv707764,nssv707765,nssv707766,nssv707767,nssv707768,nssv707769,nssv707770,nssv707771,nssv707772,nssv707773,nssv707774,nssv707775,nssv707776,nssv707777,nssv707778,nssv707779,nssv707780,nssv707781,nssv707782,nssv707783,nssv707784,nssv707785,nssv707786,nssv707787,nssv707788,nssv707789,nssv707790,nssv707791,nssv707792,nssv707707,nssv707708,nssv707709,nssv707710,nssv707711,nssv707809,nssv707810,nssv707811,nssv707812,nssv707813,nssv707814,nssv707815,nssv707808,nssv708104,nssv708105,nssv708106,nssv708107,nssv708108,nssv708109,nssv708110,nssv708111,nssv708112,nssv708113,nssv708114,nssv708115,nssv708116,nssv708117,nssv708118,nssv708119,nssv708120,nssv708121,nssv708122,nssv708123,nssv708124,nssv708125,nssv708126,nssv708127,nssv708128,nssv708129,nssv708130,nssv708131,nssv708132,nssv708133,nssv708134,nssv708135,nssv708136,nssv708137,nssv708138,nssv708139,nssv708140,nssv708141,nssv708142,nssv708143,nssv708144,nssv708145,nssv708146,nssv708147,nssv708148,nssv708149,nssv708150,nssv708151,nssv708152,nssv708153,nssv708154,nssv708155,nssv708156,nssv708157,nssv708158,nssv708159,nssv708160,nssv708161,nssv708162,nssv708163,nssv708164,nssv708165,nssv708166,nssv708167,nssv708168,nssv708169,nssv708170,nssv708171,nssv708172,nssv708173,nssv708174,nssv708175,nssv708176,nssv708177,nssv708178,nssv708179,nssv708180,nssv708181,nssv708182,nssv708183,nssv708184,nssv708185,nssv708186,nssv708187,nssv708188,nssv708189,nssv708190,nssv708191,nssv708192,nssv708193,nssv708194,nssv708195,nssv708196,nssv708197,nssv708198,nssv708199,nssv708200,nssv708201,nssv708202,nssv708203,nssv708204,nssv708205,nssv708206,nssv708207,nssv708208,nssv708209,nssv708210,nssv708211,nssv708212,nssv708213,nssv708214,nssv708215,nssv708216,nssv708217,nssv708218,nssv708219,nssv708220,nssv708221,nssv708222,nssv708223,nssv708224,nssv708225,nssv708226,nssv708227,nssv708228,nssv708229,nssv708230,nssv708231,nssv708232,nssv708233,nssv708234,nssv708235,nssv708236,nssv708237,nssv708238,nssv708239,nssv708240,nssv708241,nssv708242,nssv708243,nssv708244,nssv708245,nssv708246,nssv708247,nssv708248,nssv708249,nssv708250,nssv708251,nssv708252,nssv708253,nssv708254,nssv708255,nssv708256,nssv708257,nssv708258,nssv708259,nssv708260,nssv708261,nssv708262,nssv708263,nssv708264,nssv708265,nssv708266,nssv708267,nssv708268,nssv708269,nssv708270,nssv708271,nssv708272,nssv708273,nssv708274,nssv708275,nssv708276,nssv708277,nssv708278,nssv708279,nssv708280,nssv708281,nssv708282,nssv708283,nssv708284,nssv708285,nssv708286,nssv708287,nssv708288,nssv708289,nssv708290,nssv708291,nssv708292,nssv708293,nssv708294,nssv708295,nssv708296,nssv708297,nssv708298,nssv708299,nssv708300,nssv708301,nssv708302,nssv708303,nssv708304,nssv708305,nssv708306,nssv708307,nssv708308,nssv708309,nssv708310,nssv708311,nssv708312,nssv708313,nssv708314,nssv708315,nssv708316,nssv708317,nssv708318,nssv708319,nssv708320,nssv708321,nssv708322,nssv708323,nssv708324,nssv708325,nssv708326,nssv708327,nssv708328,nssv708329,nssv708330,nssv708331,nssv708332,nssv708333,nssv708334,nssv708335,nssv708336,nssv708337,nssv708338,nssv708339,nssv708340,nssv708341,nssv708342,nssv708343,nssv708344,nssv708345,nssv708346,nssv3000435,essv4275138,nssv708097,nssv708098,nssv708099,nssv708100,nssv708101,nssv708102,nssv708103,nssv708393,nssv708394,nssv708395,nssv708396,nssv708397,nssv708398,nssv708399,nssv708400,nssv708401,nssv708402,nssv708403,nssv708404,nssv708405,nssv708406,nssv708407,nssv708408,nssv708409,nssv707807,nssv707706,nssv708387,nssv708388,nssv708389,nssv708390,nssv708391,nssv708392;num_studies=3;studies=Levy2007,Cooper2011,Dogan2014;num_platforms=3;platforms=Custom_Illumina_1.2M,SangerSequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM,Custom_HMM,AssemblyComparison;num_samples=371;samples=sample_nssv707745,sample_nssv707744,sample_nssv707747,sample_nssv707746,sample_nssv707741,sample_nssv707740,sample_nssv707743,sample_nssv707742,sample_nssv707749,sample_nssv707748,sample_nssv708304,sample_nssv708305,sample_nssv708306,sample_nssv708307,sample_nssv708300,sample_nssv708301,sample_nssv708302,sample_nssv708303,sample_nssv708308,sample_nssv708309,sample_nssv708399,sample_nssv708398,sample_nssv708393,sample_nssv708392,sample_nssv708391,sample_nssv708390,sample_nssv708397,sample_nssv708396,sample_nssv708395,sample_nssv708394,sample_nssv708278,sample_nssv708279,sample_nssv708270,sample_nssv708271,sample_nssv708272,sample_nssv708273,sample_nssv708274,sample_nssv708275,sample_nssv708276,sample_nssv708277,sample_nssv707778,sample_nssv707779,HuRef,sample_nssv707774,sample_nssv707775,sample_nssv707776,sample_nssv707777,sample_nssv707770,sample_nssv707771,sample_nssv708193,sample_nssv708192,sample_nssv708188,sample_nssv708189,sample_nssv708186,sample_nssv708187,sample_nssv708184,sample_nssv708185,sample_nssv708182,sample_nssv708183,sample_nssv708180,sample_nssv708181,sample_nssv708115,sample_nssv708114,sample_nssv708117,sample_nssv708116,sample_nssv708111,sample_nssv708110,sample_nssv708113,sample_nssv708112,sample_nssv708119,sample_nssv708118,sample_nssv708339,sample_nssv708338,sample_nssv708335,sample_nssv708334,sample_nssv708337,sample_nssv708336,sample_nssv708331,sample_nssv708330,sample_nssv708333,sample_nssv708332,sample_nssv708234,sample_nssv708235,sample_nssv708236,sample_nssv708237,sample_nssv708230,sample_nssv708231,sample_nssv708232,sample_nssv708233,sample_nssv708238,sample_nssv708239,sample_nssv707718,sample_nssv707719,sample_nssv707712,sample_nssv707713,sample_nssv707710,sample_nssv707711,sample_nssv707716,sample_nssv707717,sample_nssv707714,sample_nssv707715,sample_nssv708241,sample_nssv708240,sample_nssv708243,sample_nssv708242,sample_nssv708245,sample_nssv708244,sample_nssv708247,sample_nssv708246,sample_nssv708249,sample_nssv708248,sample_nssv707808,sample_nssv707809,sample_nssv707807,sample_nssv708148,sample_nssv708149,sample_nssv708142,sample_nssv708143,sample_nssv708140,sample_nssv708141,sample_nssv708146,sample_nssv708147,sample_nssv708144,sample_nssv708145,sample_nssv707756,sample_nssv707757,sample_nssv707754,sample_nssv707755,sample_nssv707752,sample_nssv707753,sample_nssv707750,sample_nssv707751,sample_nssv707758,sample_nssv707759,sample_nssv708388,sample_nssv708389,sample_nssv708387,sample_nssv707730,sample_nssv708209,sample_nssv708208,sample_nssv707731,sample_nssv708205,sample_nssv708204,sample_nssv708207,sample_nssv708206,sample_nssv708201,sample_nssv708200,sample_nssv708203,sample_nssv708202,sample_nssv708106,sample_nssv708107,sample_nssv708104,sample_nssv708105,sample_nssv708102,sample_nssv708103,sample_nssv708100,sample_nssv708101,sample_nssv708108,sample_nssv708109,sample_nssv708328,sample_nssv708329,sample_nssv708326,sample_nssv708327,sample_nssv708324,sample_nssv708325,sample_nssv708322,sample_nssv708323,sample_nssv708320,sample_nssv708321,sample_nssv707729,sample_nssv707728,sample_nssv707727,sample_nssv707726,sample_nssv707725,sample_nssv707724,sample_nssv707723,sample_nssv707722,sample_nssv707721,sample_nssv707720,sample_nssv708252,sample_nssv708253,sample_nssv708250,sample_nssv708251,sample_nssv708256,sample_nssv708257,sample_nssv708254,sample_nssv708255,sample_nssv708258,sample_nssv708259,sample_nssv708403,sample_nssv708179,sample_nssv708178,sample_nssv708177,sample_nssv708176,sample_nssv708175,sample_nssv708174,sample_nssv708173,sample_nssv708172,sample_nssv708171,sample_nssv708170,sample_nssv708402,sample_nssv707769,sample_nssv707768,sample_nssv707763,sample_nssv707762,sample_nssv707761,sample_nssv707760,sample_nssv707767,sample_nssv707766,sample_nssv707765,sample_nssv707764,sample_nssv708400,sample_nssv708218,sample_nssv708219,sample_nssv708216,sample_nssv708217,sample_nssv708214,sample_nssv708215,sample_nssv708212,sample_nssv708213,sample_nssv708210,sample_nssv708211,BILGI_BIOE,sample_nssv708285,sample_nssv708284,sample_nssv708287,sample_nssv708286,sample_nssv708281,sample_nssv708280,sample_nssv708283,sample_nssv708282,sample_nssv708406,sample_nssv708289,sample_nssv708288,sample_nssv707781,sample_nssv707780,sample_nssv707783,sample_nssv707782,sample_nssv707785,sample_nssv707784,sample_nssv707787,sample_nssv707786,sample_nssv707789,sample_nssv707788,sample_nssv708139,sample_nssv708138,sample_nssv708133,sample_nssv708132,sample_nssv708131,sample_nssv708130,sample_nssv708137,sample_nssv708136,sample_nssv708135,sample_nssv708134,sample_nssv708098,sample_nssv708099,sample_nssv707732,sample_nssv707733,sample_nssv707734,sample_nssv707735,sample_nssv707736,sample_nssv707737,sample_nssv707738,sample_nssv707739,sample_nssv708097,sample_nssv708313,sample_nssv708312,sample_nssv708311,sample_nssv708310,sample_nssv708317,sample_nssv708316,sample_nssv708315,sample_nssv708314,sample_nssv708319,sample_nssv708318,sample_nssv708267,sample_nssv708266,sample_nssv708265,sample_nssv708264,sample_nssv708263,sample_nssv708262,sample_nssv708261,sample_nssv708260,sample_nssv708269,sample_nssv708268,sample_nssv708199,sample_nssv708198,sample_nssv708195,sample_nssv708194,sample_nssv708197,sample_nssv708196,sample_nssv708191,sample_nssv708190,sample_nssv707772,sample_nssv707773,sample_nssv708160,sample_nssv708161,sample_nssv708162,sample_nssv708163,sample_nssv708164,sample_nssv708165,sample_nssv708166,sample_nssv708167,sample_nssv708168,sample_nssv708169,sample_nssv708340,sample_nssv708341,sample_nssv708342,sample_nssv708343,sample_nssv708344,sample_nssv708345,sample_nssv708346,sample_nssv708223,sample_nssv708222,sample_nssv708221,sample_nssv708220,sample_nssv708227,sample_nssv708226,sample_nssv708225,sample_nssv708224,sample_nssv708229,sample_nssv708228,sample_nssv708401,sample_nssv708296,sample_nssv708297,sample_nssv708294,sample_nssv708295,sample_nssv708292,sample_nssv708293,sample_nssv708290,sample_nssv708291,sample_nssv708407,sample_nssv708298,sample_nssv708299,sample_nssv707709,sample_nssv707708,sample_nssv708405,sample_nssv708404,sample_nssv707707,sample_nssv707706,sample_nssv707792,sample_nssv707790,sample_nssv707791,sample_nssv707815,sample_nssv707814,sample_nssv707811,sample_nssv707810,sample_nssv707813,sample_nssv707812,sample_nssv708159,sample_nssv708158,sample_nssv708409,sample_nssv708408,sample_nssv708151,sample_nssv708150,sample_nssv708153,sample_nssv708152,sample_nssv708155,sample_nssv708154,sample_nssv708157,sample_nssv708156,sample_nssv708128,sample_nssv708129,sample_nssv708124,sample_nssv708125,sample_nssv708126,sample_nssv708127,sample_nssv708120,sample_nssv708121,sample_nssv708122,sample_nssv708123;num_samples_tested=1502;frequency=24.7%;num_unique_samples_tested=1502;nr_frequency=24.7%;PopulationSummary=European 370:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	870324	870324	.	.	.	ID=gssv294;Name=gssv294;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=869443;inner_start=869521;inner_end=870309;outer_end=870324;inner_rank=2;num_variants=371;variants=nssv707712,nssv707713,nssv707714,nssv707715,nssv707716,nssv707717,nssv707718,nssv707719,nssv707720,nssv707721,nssv707722,nssv707723,nssv707724,nssv707725,nssv707726,nssv707727,nssv707728,nssv707729,nssv707730,nssv707731,nssv707732,nssv707733,nssv707734,nssv707735,nssv707736,nssv707737,nssv707738,nssv707739,nssv707740,nssv707741,nssv707742,nssv707743,nssv707744,nssv707745,nssv707746,nssv707747,nssv707748,nssv707749,nssv707750,nssv707751,nssv707752,nssv707753,nssv707754,nssv707755,nssv707756,nssv707757,nssv707758,nssv707759,nssv707760,nssv707761,nssv707762,nssv707763,nssv707764,nssv707765,nssv707766,nssv707767,nssv707768,nssv707769,nssv707770,nssv707771,nssv707772,nssv707773,nssv707774,nssv707775,nssv707776,nssv707777,nssv707778,nssv707779,nssv707780,nssv707781,nssv707782,nssv707783,nssv707784,nssv707785,nssv707786,nssv707787,nssv707788,nssv707789,nssv707790,nssv707791,nssv707792,nssv707707,nssv707708,nssv707709,nssv707710,nssv707711,nssv707809,nssv707810,nssv707811,nssv707812,nssv707813,nssv707814,nssv707815,nssv707808,nssv708104,nssv708105,nssv708106,nssv708107,nssv708108,nssv708109,nssv708110,nssv708111,nssv708112,nssv708113,nssv708114,nssv708115,nssv708116,nssv708117,nssv708118,nssv708119,nssv708120,nssv708121,nssv708122,nssv708123,nssv708124,nssv708125,nssv708126,nssv708127,nssv708128,nssv708129,nssv708130,nssv708131,nssv708132,nssv708133,nssv708134,nssv708135,nssv708136,nssv708137,nssv708138,nssv708139,nssv708140,nssv708141,nssv708142,nssv708143,nssv708144,nssv708145,nssv708146,nssv708147,nssv708148,nssv708149,nssv708150,nssv708151,nssv708152,nssv708153,nssv708154,nssv708155,nssv708156,nssv708157,nssv708158,nssv708159,nssv708160,nssv708161,nssv708162,nssv708163,nssv708164,nssv708165,nssv708166,nssv708167,nssv708168,nssv708169,nssv708170,nssv708171,nssv708172,nssv708173,nssv708174,nssv708175,nssv708176,nssv708177,nssv708178,nssv708179,nssv708180,nssv708181,nssv708182,nssv708183,nssv708184,nssv708185,nssv708186,nssv708187,nssv708188,nssv708189,nssv708190,nssv708191,nssv708192,nssv708193,nssv708194,nssv708195,nssv708196,nssv708197,nssv708198,nssv708199,nssv708200,nssv708201,nssv708202,nssv708203,nssv708204,nssv708205,nssv708206,nssv708207,nssv708208,nssv708209,nssv708210,nssv708211,nssv708212,nssv708213,nssv708214,nssv708215,nssv708216,nssv708217,nssv708218,nssv708219,nssv708220,nssv708221,nssv708222,nssv708223,nssv708224,nssv708225,nssv708226,nssv708227,nssv708228,nssv708229,nssv708230,nssv708231,nssv708232,nssv708233,nssv708234,nssv708235,nssv708236,nssv708237,nssv708238,nssv708239,nssv708240,nssv708241,nssv708242,nssv708243,nssv708244,nssv708245,nssv708246,nssv708247,nssv708248,nssv708249,nssv708250,nssv708251,nssv708252,nssv708253,nssv708254,nssv708255,nssv708256,nssv708257,nssv708258,nssv708259,nssv708260,nssv708261,nssv708262,nssv708263,nssv708264,nssv708265,nssv708266,nssv708267,nssv708268,nssv708269,nssv708270,nssv708271,nssv708272,nssv708273,nssv708274,nssv708275,nssv708276,nssv708277,nssv708278,nssv708279,nssv708280,nssv708281,nssv708282,nssv708283,nssv708284,nssv708285,nssv708286,nssv708287,nssv708288,nssv708289,nssv708290,nssv708291,nssv708292,nssv708293,nssv708294,nssv708295,nssv708296,nssv708297,nssv708298,nssv708299,nssv708300,nssv708301,nssv708302,nssv708303,nssv708304,nssv708305,nssv708306,nssv708307,nssv708308,nssv708309,nssv708310,nssv708311,nssv708312,nssv708313,nssv708314,nssv708315,nssv708316,nssv708317,nssv708318,nssv708319,nssv708320,nssv708321,nssv708322,nssv708323,nssv708324,nssv708325,nssv708326,nssv708327,nssv708328,nssv708329,nssv708330,nssv708331,nssv708332,nssv708333,nssv708334,nssv708335,nssv708336,nssv708337,nssv708338,nssv708339,nssv708340,nssv708341,nssv708342,nssv708343,nssv708344,nssv708345,nssv708346,nssv3000435,essv4275138,nssv708097,nssv708098,nssv708099,nssv708100,nssv708101,nssv708102,nssv708103,nssv708393,nssv708394,nssv708395,nssv708396,nssv708397,nssv708398,nssv708399,nssv708400,nssv708401,nssv708402,nssv708403,nssv708404,nssv708405,nssv708406,nssv708407,nssv708408,nssv708409,nssv707807,nssv707706,nssv708387,nssv708388,nssv708389,nssv708390,nssv708391,nssv708392;num_studies=3;studies=Levy2007,Cooper2011,Dogan2014;num_platforms=3;platforms=Custom_Illumina_1.2M,SangerSequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM,Custom_HMM,AssemblyComparison;num_samples=371;samples=sample_nssv707745,sample_nssv707744,sample_nssv707747,sample_nssv707746,sample_nssv707741,sample_nssv707740,sample_nssv707743,sample_nssv707742,sample_nssv707749,sample_nssv707748,sample_nssv708304,sample_nssv708305,sample_nssv708306,sample_nssv708307,sample_nssv708300,sample_nssv708301,sample_nssv708302,sample_nssv708303,sample_nssv708308,sample_nssv708309,sample_nssv708399,sample_nssv708398,sample_nssv708393,sample_nssv708392,sample_nssv708391,sample_nssv708390,sample_nssv708397,sample_nssv708396,sample_nssv708395,sample_nssv708394,sample_nssv708278,sample_nssv708279,sample_nssv708270,sample_nssv708271,sample_nssv708272,sample_nssv708273,sample_nssv708274,sample_nssv708275,sample_nssv708276,sample_nssv708277,sample_nssv707778,sample_nssv707779,HuRef,sample_nssv707774,sample_nssv707775,sample_nssv707776,sample_nssv707777,sample_nssv707770,sample_nssv707771,sample_nssv708193,sample_nssv708192,sample_nssv708188,sample_nssv708189,sample_nssv708186,sample_nssv708187,sample_nssv708184,sample_nssv708185,sample_nssv708182,sample_nssv708183,sample_nssv708180,sample_nssv708181,sample_nssv708115,sample_nssv708114,sample_nssv708117,sample_nssv708116,sample_nssv708111,sample_nssv708110,sample_nssv708113,sample_nssv708112,sample_nssv708119,sample_nssv708118,sample_nssv708339,sample_nssv708338,sample_nssv708335,sample_nssv708334,sample_nssv708337,sample_nssv708336,sample_nssv708331,sample_nssv708330,sample_nssv708333,sample_nssv708332,sample_nssv708234,sample_nssv708235,sample_nssv708236,sample_nssv708237,sample_nssv708230,sample_nssv708231,sample_nssv708232,sample_nssv708233,sample_nssv708238,sample_nssv708239,sample_nssv707718,sample_nssv707719,sample_nssv707712,sample_nssv707713,sample_nssv707710,sample_nssv707711,sample_nssv707716,sample_nssv707717,sample_nssv707714,sample_nssv707715,sample_nssv708241,sample_nssv708240,sample_nssv708243,sample_nssv708242,sample_nssv708245,sample_nssv708244,sample_nssv708247,sample_nssv708246,sample_nssv708249,sample_nssv708248,sample_nssv707808,sample_nssv707809,sample_nssv707807,sample_nssv708148,sample_nssv708149,sample_nssv708142,sample_nssv708143,sample_nssv708140,sample_nssv708141,sample_nssv708146,sample_nssv708147,sample_nssv708144,sample_nssv708145,sample_nssv707756,sample_nssv707757,sample_nssv707754,sample_nssv707755,sample_nssv707752,sample_nssv707753,sample_nssv707750,sample_nssv707751,sample_nssv707758,sample_nssv707759,sample_nssv708388,sample_nssv708389,sample_nssv708387,sample_nssv707730,sample_nssv708209,sample_nssv708208,sample_nssv707731,sample_nssv708205,sample_nssv708204,sample_nssv708207,sample_nssv708206,sample_nssv708201,sample_nssv708200,sample_nssv708203,sample_nssv708202,sample_nssv708106,sample_nssv708107,sample_nssv708104,sample_nssv708105,sample_nssv708102,sample_nssv708103,sample_nssv708100,sample_nssv708101,sample_nssv708108,sample_nssv708109,sample_nssv708328,sample_nssv708329,sample_nssv708326,sample_nssv708327,sample_nssv708324,sample_nssv708325,sample_nssv708322,sample_nssv708323,sample_nssv708320,sample_nssv708321,sample_nssv707729,sample_nssv707728,sample_nssv707727,sample_nssv707726,sample_nssv707725,sample_nssv707724,sample_nssv707723,sample_nssv707722,sample_nssv707721,sample_nssv707720,sample_nssv708252,sample_nssv708253,sample_nssv708250,sample_nssv708251,sample_nssv708256,sample_nssv708257,sample_nssv708254,sample_nssv708255,sample_nssv708258,sample_nssv708259,sample_nssv708403,sample_nssv708179,sample_nssv708178,sample_nssv708177,sample_nssv708176,sample_nssv708175,sample_nssv708174,sample_nssv708173,sample_nssv708172,sample_nssv708171,sample_nssv708170,sample_nssv708402,sample_nssv707769,sample_nssv707768,sample_nssv707763,sample_nssv707762,sample_nssv707761,sample_nssv707760,sample_nssv707767,sample_nssv707766,sample_nssv707765,sample_nssv707764,sample_nssv708400,sample_nssv708218,sample_nssv708219,sample_nssv708216,sample_nssv708217,sample_nssv708214,sample_nssv708215,sample_nssv708212,sample_nssv708213,sample_nssv708210,sample_nssv708211,BILGI_BIOE,sample_nssv708285,sample_nssv708284,sample_nssv708287,sample_nssv708286,sample_nssv708281,sample_nssv708280,sample_nssv708283,sample_nssv708282,sample_nssv708406,sample_nssv708289,sample_nssv708288,sample_nssv707781,sample_nssv707780,sample_nssv707783,sample_nssv707782,sample_nssv707785,sample_nssv707784,sample_nssv707787,sample_nssv707786,sample_nssv707789,sample_nssv707788,sample_nssv708139,sample_nssv708138,sample_nssv708133,sample_nssv708132,sample_nssv708131,sample_nssv708130,sample_nssv708137,sample_nssv708136,sample_nssv708135,sample_nssv708134,sample_nssv708098,sample_nssv708099,sample_nssv707732,sample_nssv707733,sample_nssv707734,sample_nssv707735,sample_nssv707736,sample_nssv707737,sample_nssv707738,sample_nssv707739,sample_nssv708097,sample_nssv708313,sample_nssv708312,sample_nssv708311,sample_nssv708310,sample_nssv708317,sample_nssv708316,sample_nssv708315,sample_nssv708314,sample_nssv708319,sample_nssv708318,sample_nssv708267,sample_nssv708266,sample_nssv708265,sample_nssv708264,sample_nssv708263,sample_nssv708262,sample_nssv708261,sample_nssv708260,sample_nssv708269,sample_nssv708268,sample_nssv708199,sample_nssv708198,sample_nssv708195,sample_nssv708194,sample_nssv708197,sample_nssv708196,sample_nssv708191,sample_nssv708190,sample_nssv707772,sample_nssv707773,sample_nssv708160,sample_nssv708161,sample_nssv708162,sample_nssv708163,sample_nssv708164,sample_nssv708165,sample_nssv708166,sample_nssv708167,sample_nssv708168,sample_nssv708169,sample_nssv708340,sample_nssv708341,sample_nssv708342,sample_nssv708343,sample_nssv708344,sample_nssv708345,sample_nssv708346,sample_nssv708223,sample_nssv708222,sample_nssv708221,sample_nssv708220,sample_nssv708227,sample_nssv708226,sample_nssv708225,sample_nssv708224,sample_nssv708229,sample_nssv708228,sample_nssv708401,sample_nssv708296,sample_nssv708297,sample_nssv708294,sample_nssv708295,sample_nssv708292,sample_nssv708293,sample_nssv708290,sample_nssv708291,sample_nssv708407,sample_nssv708298,sample_nssv708299,sample_nssv707709,sample_nssv707708,sample_nssv708405,sample_nssv708404,sample_nssv707707,sample_nssv707706,sample_nssv707792,sample_nssv707790,sample_nssv707791,sample_nssv707815,sample_nssv707814,sample_nssv707811,sample_nssv707810,sample_nssv707813,sample_nssv707812,sample_nssv708159,sample_nssv708158,sample_nssv708409,sample_nssv708408,sample_nssv708151,sample_nssv708150,sample_nssv708153,sample_nssv708152,sample_nssv708155,sample_nssv708154,sample_nssv708157,sample_nssv708156,sample_nssv708128,sample_nssv708129,sample_nssv708124,sample_nssv708125,sample_nssv708126,sample_nssv708127,sample_nssv708120,sample_nssv708121,sample_nssv708122,sample_nssv708123;num_samples_tested=1502;frequency=24.7%;num_unique_samples_tested=1502;nr_frequency=24.7%;PopulationSummary=European 370:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	963659	963659	.	.	.	ID=gssv297;Name=gssv297;variant_type=CNV;variant_sub_type=Loss;outer_start=963659;inner_start=963815;inner_end=964480;outer_end=964567;inner_rank=7;num_variants=217;variants=essv69735,essv26856,essv3586137,essv56154,essv51669,essv65846,essv79600,essv5397305,essv5438152,essv5441289,essv5443079,essv5448884,essv5456064,essv5460067,essv5462103,essv5464919,essv5466613,essv5484641,essv5491037,essv5493240,essv5509723,essv5512746,essv5515175,essv5515257,essv5519265,essv5525377,essv5533171,essv5534660,essv5543982,essv5544079,essv5552270,essv5574524,essv5578565,essv5579307,essv5586667,essv5589591,essv5596252,essv5597778,essv5600714,essv5601728,essv5607185,essv5607932,essv5613816,essv5614201,essv5615962,essv5620395,essv5629256,essv5655999,essv5657075,essv5666985,essv5670392,essv5672078,essv5674953,essv5680961,essv5694805,essv5700798,essv5700942,essv5714107,essv5717079,essv5718506,essv5722499,essv5729992,essv5734294,essv5741053,essv5750218,essv5758458,essv5759307,essv5763678,essv5765836,essv5766055,essv5770283,essv5771704,essv5775808,essv5782186,essv5789270,essv5793300,essv5795116,essv5803925,essv5809115,essv5819196,essv5819882,essv5821062,essv5824591,essv5829646,essv5840741,essv5853566,essv5870748,essv5870935,essv5885429,essv5885638,essv5912544,essv5915311,essv5916857,essv5929362,essv5929634,essv5942233,essv5958628,essv5964725,essv5977948,essv5978321,essv5980381,essv5987847,essv5987883,essv5992380,essv5993590,essv5994815,essv6000145,essv6001928,essv6016807,essv6018657,essv6019519,essv6022508,essv6027655,essv6029294,essv6030509,essv6031648,essv6032236,essv6043080,essv6048979,essv6051709,essv6054536,essv6054853,essv6067524,essv6069837,essv6070502,essv6071729,essv6085598,essv6096713,essv6105732,essv6117995,essv6123918,essv6147838,essv6150676,essv6152898,essv6154985,essv6158394,essv6168477,essv6168761,essv6175781,essv6177663,essv6178153,essv6183968,essv6192230,essv6197367,essv6197707,essv6198018,essv6204902,essv6211448,essv6212079,essv6215092,essv6221043,essv6229256,essv6239917,essv6241223,essv6243124,essv6261205,essv6261633,essv6262010,essv6269485,essv6273537,essv6275093,essv6283772,essv6286261,essv6293236,essv6301862,essv6320707,essv6325568,essv6332345,essv6336428,essv6337876,essv6338714,essv6339703,essv6347242,essv6349109,essv6352021,essv6362474,essv6368059,essv6371427,essv6379238,essv6386003,essv6401814,essv6412237,essv6412469,essv6418029,essv6424714,essv6425065,essv6427750,essv6432453,essv6434262,essv6445789,essv6450578,essv6452440,essv6453590,essv6460718,essv6461709,essv6461713,essv6462535,essv6463649,essv6467904,essv6471857,essv6474371,essv6479044,essv6482402,essv6493518,essv6498080,essv6504358,essv6510298,essv6510320,essv6510454,essv6512480,essv6535245,essv6559100,essv6572780,essv6573154,essv6579614,essv6584245,essv6596508;num_studies=4;studies=Pang2010,Wang2008,Conrad2009,1000GenomesPhase1;num_platforms=3;platforms=Illumina_GA,NimbleGen42M,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GADA;num_samples=217;samples=NA18987,NA18566,HG00607,NA18980,NA18565,HG00342,NA18989,NA20291,NA11830,NA18861,NA12546,NA18619,NA20516,NA20517,HG00273,HG00275,NA20513,NA20510,HG00276,HG01390,NA20766,HG00375,HG00140,HG01353,NA20346,HG01250,NA19445,HG01389,NA11931,NA18557,NA19703,NA19707,HG00345,HG01456,HG00654,HG01148,NA06984,NA06986,HG01522,HG01518,HG00159,HG00268,HG00306,HG00151,NA19075,NA19077,NA19076,HG01061,HG00419,NA12342,NA19473,HG01374,NA12777,NA12776,NA18549,NA18545,NA18542,HG00640,HG00641,HG00357,NA18571,HG00565,NA19780,NA19462,NA19463,HG00160,HuRef,NA19078,HG01070,HG00250,NA12283,NA19371,HG01375,NA19375,HG00280,HG00281,NA11919,NA19648,NA19003,NA19316,NA18530,NA18536,NA19471,HG00173,NA11994,NA11995,NA20525,HG00274,NA20783,HG00326,HG00325,HG01437,HG00323,HG00277,NA19904,HG00554,HG00702,NA20778,HG01124,HG00328,NA20276,HG01047,HG00146,HG01048,HG01365,HG01366,NA18950,NA19327,HG00708,HG01489,HG00237,NA20582,HG00231,NA18947,HG00108,NA12348,HG01354,NA19676,HG01350,NA20796,NA06989,NA20799,NA12749,HG01359,HG00581,HG00137,HG01197,HG00740,HG00731,NA19723,HG00500,NA19084,HG00463,HG00187,NA18632,NA19355,HG00327,NA19722,HG00311,NA18912,HG00116,HG01082,HG00180,NA19439,HG01551,HG00353,HG01052,HG00614,HG00590,HG00693,HG00185,NA19240,HG00699,YH,NA19082,NA20585,NA19057,NA19055,NA20808,NA12763,HG00125,HG00124,NA19834,HG00123,NA18616,HG00443,HG00608,NA18613,HG00251,HG00319,HG01461,HG00449,HG01134,HG00310,NA18592,HG01334,NA20539,NA20530,NA20531,NA20532,NA18577,NA18576,NA20756,NA18573,NA19197,NA20752,NA18570,NA19982,NA18999,NA12044,HG00138,HG00537,HG00253,HG00136,HG00732,HG00252,HG00245,HG00246,HG00247,NA18610,HG00242,NA18582,HG00734,HG00361,NA18611,HG00367,HG00366,NA18856,NA20508,NA19347,HG00736,NA12718,HG00534,NA19453,HG01133,NA19451,NA12842;num_samples_tested=1097;frequency=19.78%;num_unique_samples_tested=1060;nr_frequency=20.47%;PopulationSummary=European 95:Asian 55:Mexican 5:African 27:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 35:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	963815	964480	.	.	.	ID=gssv297;Name=gssv297;variant_type=CNV;variant_sub_type=Loss;outer_start=963659;inner_start=963815;inner_end=964480;outer_end=964567;inner_rank=7;num_variants=217;variants=essv69735,essv26856,essv3586137,essv56154,essv51669,essv65846,essv79600,essv5397305,essv5438152,essv5441289,essv5443079,essv5448884,essv5456064,essv5460067,essv5462103,essv5464919,essv5466613,essv5484641,essv5491037,essv5493240,essv5509723,essv5512746,essv5515175,essv5515257,essv5519265,essv5525377,essv5533171,essv5534660,essv5543982,essv5544079,essv5552270,essv5574524,essv5578565,essv5579307,essv5586667,essv5589591,essv5596252,essv5597778,essv5600714,essv5601728,essv5607185,essv5607932,essv5613816,essv5614201,essv5615962,essv5620395,essv5629256,essv5655999,essv5657075,essv5666985,essv5670392,essv5672078,essv5674953,essv5680961,essv5694805,essv5700798,essv5700942,essv5714107,essv5717079,essv5718506,essv5722499,essv5729992,essv5734294,essv5741053,essv5750218,essv5758458,essv5759307,essv5763678,essv5765836,essv5766055,essv5770283,essv5771704,essv5775808,essv5782186,essv5789270,essv5793300,essv5795116,essv5803925,essv5809115,essv5819196,essv5819882,essv5821062,essv5824591,essv5829646,essv5840741,essv5853566,essv5870748,essv5870935,essv5885429,essv5885638,essv5912544,essv5915311,essv5916857,essv5929362,essv5929634,essv5942233,essv5958628,essv5964725,essv5977948,essv5978321,essv5980381,essv5987847,essv5987883,essv5992380,essv5993590,essv5994815,essv6000145,essv6001928,essv6016807,essv6018657,essv6019519,essv6022508,essv6027655,essv6029294,essv6030509,essv6031648,essv6032236,essv6043080,essv6048979,essv6051709,essv6054536,essv6054853,essv6067524,essv6069837,essv6070502,essv6071729,essv6085598,essv6096713,essv6105732,essv6117995,essv6123918,essv6147838,essv6150676,essv6152898,essv6154985,essv6158394,essv6168477,essv6168761,essv6175781,essv6177663,essv6178153,essv6183968,essv6192230,essv6197367,essv6197707,essv6198018,essv6204902,essv6211448,essv6212079,essv6215092,essv6221043,essv6229256,essv6239917,essv6241223,essv6243124,essv6261205,essv6261633,essv6262010,essv6269485,essv6273537,essv6275093,essv6283772,essv6286261,essv6293236,essv6301862,essv6320707,essv6325568,essv6332345,essv6336428,essv6337876,essv6338714,essv6339703,essv6347242,essv6349109,essv6352021,essv6362474,essv6368059,essv6371427,essv6379238,essv6386003,essv6401814,essv6412237,essv6412469,essv6418029,essv6424714,essv6425065,essv6427750,essv6432453,essv6434262,essv6445789,essv6450578,essv6452440,essv6453590,essv6460718,essv6461709,essv6461713,essv6462535,essv6463649,essv6467904,essv6471857,essv6474371,essv6479044,essv6482402,essv6493518,essv6498080,essv6504358,essv6510298,essv6510320,essv6510454,essv6512480,essv6535245,essv6559100,essv6572780,essv6573154,essv6579614,essv6584245,essv6596508;num_studies=4;studies=Pang2010,Wang2008,Conrad2009,1000GenomesPhase1;num_platforms=3;platforms=Illumina_GA,NimbleGen42M,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GADA;num_samples=217;samples=NA18987,NA18566,HG00607,NA18980,NA18565,HG00342,NA18989,NA20291,NA11830,NA18861,NA12546,NA18619,NA20516,NA20517,HG00273,HG00275,NA20513,NA20510,HG00276,HG01390,NA20766,HG00375,HG00140,HG01353,NA20346,HG01250,NA19445,HG01389,NA11931,NA18557,NA19703,NA19707,HG00345,HG01456,HG00654,HG01148,NA06984,NA06986,HG01522,HG01518,HG00159,HG00268,HG00306,HG00151,NA19075,NA19077,NA19076,HG01061,HG00419,NA12342,NA19473,HG01374,NA12777,NA12776,NA18549,NA18545,NA18542,HG00640,HG00641,HG00357,NA18571,HG00565,NA19780,NA19462,NA19463,HG00160,HuRef,NA19078,HG01070,HG00250,NA12283,NA19371,HG01375,NA19375,HG00280,HG00281,NA11919,NA19648,NA19003,NA19316,NA18530,NA18536,NA19471,HG00173,NA11994,NA11995,NA20525,HG00274,NA20783,HG00326,HG00325,HG01437,HG00323,HG00277,NA19904,HG00554,HG00702,NA20778,HG01124,HG00328,NA20276,HG01047,HG00146,HG01048,HG01365,HG01366,NA18950,NA19327,HG00708,HG01489,HG00237,NA20582,HG00231,NA18947,HG00108,NA12348,HG01354,NA19676,HG01350,NA20796,NA06989,NA20799,NA12749,HG01359,HG00581,HG00137,HG01197,HG00740,HG00731,NA19723,HG00500,NA19084,HG00463,HG00187,NA18632,NA19355,HG00327,NA19722,HG00311,NA18912,HG00116,HG01082,HG00180,NA19439,HG01551,HG00353,HG01052,HG00614,HG00590,HG00693,HG00185,NA19240,HG00699,YH,NA19082,NA20585,NA19057,NA19055,NA20808,NA12763,HG00125,HG00124,NA19834,HG00123,NA18616,HG00443,HG00608,NA18613,HG00251,HG00319,HG01461,HG00449,HG01134,HG00310,NA18592,HG01334,NA20539,NA20530,NA20531,NA20532,NA18577,NA18576,NA20756,NA18573,NA19197,NA20752,NA18570,NA19982,NA18999,NA12044,HG00138,HG00537,HG00253,HG00136,HG00732,HG00252,HG00245,HG00246,HG00247,NA18610,HG00242,NA18582,HG00734,HG00361,NA18611,HG00367,HG00366,NA18856,NA20508,NA19347,HG00736,NA12718,HG00534,NA19453,HG01133,NA19451,NA12842;num_samples_tested=1097;frequency=19.78%;num_unique_samples_tested=1060;nr_frequency=20.47%;PopulationSummary=European 95:Asian 55:Mexican 5:African 27:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 35:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	964567	964567	.	.	.	ID=gssv297;Name=gssv297;variant_type=CNV;variant_sub_type=Loss;outer_start=963659;inner_start=963815;inner_end=964480;outer_end=964567;inner_rank=7;num_variants=217;variants=essv69735,essv26856,essv3586137,essv56154,essv51669,essv65846,essv79600,essv5397305,essv5438152,essv5441289,essv5443079,essv5448884,essv5456064,essv5460067,essv5462103,essv5464919,essv5466613,essv5484641,essv5491037,essv5493240,essv5509723,essv5512746,essv5515175,essv5515257,essv5519265,essv5525377,essv5533171,essv5534660,essv5543982,essv5544079,essv5552270,essv5574524,essv5578565,essv5579307,essv5586667,essv5589591,essv5596252,essv5597778,essv5600714,essv5601728,essv5607185,essv5607932,essv5613816,essv5614201,essv5615962,essv5620395,essv5629256,essv5655999,essv5657075,essv5666985,essv5670392,essv5672078,essv5674953,essv5680961,essv5694805,essv5700798,essv5700942,essv5714107,essv5717079,essv5718506,essv5722499,essv5729992,essv5734294,essv5741053,essv5750218,essv5758458,essv5759307,essv5763678,essv5765836,essv5766055,essv5770283,essv5771704,essv5775808,essv5782186,essv5789270,essv5793300,essv5795116,essv5803925,essv5809115,essv5819196,essv5819882,essv5821062,essv5824591,essv5829646,essv5840741,essv5853566,essv5870748,essv5870935,essv5885429,essv5885638,essv5912544,essv5915311,essv5916857,essv5929362,essv5929634,essv5942233,essv5958628,essv5964725,essv5977948,essv5978321,essv5980381,essv5987847,essv5987883,essv5992380,essv5993590,essv5994815,essv6000145,essv6001928,essv6016807,essv6018657,essv6019519,essv6022508,essv6027655,essv6029294,essv6030509,essv6031648,essv6032236,essv6043080,essv6048979,essv6051709,essv6054536,essv6054853,essv6067524,essv6069837,essv6070502,essv6071729,essv6085598,essv6096713,essv6105732,essv6117995,essv6123918,essv6147838,essv6150676,essv6152898,essv6154985,essv6158394,essv6168477,essv6168761,essv6175781,essv6177663,essv6178153,essv6183968,essv6192230,essv6197367,essv6197707,essv6198018,essv6204902,essv6211448,essv6212079,essv6215092,essv6221043,essv6229256,essv6239917,essv6241223,essv6243124,essv6261205,essv6261633,essv6262010,essv6269485,essv6273537,essv6275093,essv6283772,essv6286261,essv6293236,essv6301862,essv6320707,essv6325568,essv6332345,essv6336428,essv6337876,essv6338714,essv6339703,essv6347242,essv6349109,essv6352021,essv6362474,essv6368059,essv6371427,essv6379238,essv6386003,essv6401814,essv6412237,essv6412469,essv6418029,essv6424714,essv6425065,essv6427750,essv6432453,essv6434262,essv6445789,essv6450578,essv6452440,essv6453590,essv6460718,essv6461709,essv6461713,essv6462535,essv6463649,essv6467904,essv6471857,essv6474371,essv6479044,essv6482402,essv6493518,essv6498080,essv6504358,essv6510298,essv6510320,essv6510454,essv6512480,essv6535245,essv6559100,essv6572780,essv6573154,essv6579614,essv6584245,essv6596508;num_studies=4;studies=Pang2010,Wang2008,Conrad2009,1000GenomesPhase1;num_platforms=3;platforms=Illumina_GA,NimbleGen42M,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GADA;num_samples=217;samples=NA18987,NA18566,HG00607,NA18980,NA18565,HG00342,NA18989,NA20291,NA11830,NA18861,NA12546,NA18619,NA20516,NA20517,HG00273,HG00275,NA20513,NA20510,HG00276,HG01390,NA20766,HG00375,HG00140,HG01353,NA20346,HG01250,NA19445,HG01389,NA11931,NA18557,NA19703,NA19707,HG00345,HG01456,HG00654,HG01148,NA06984,NA06986,HG01522,HG01518,HG00159,HG00268,HG00306,HG00151,NA19075,NA19077,NA19076,HG01061,HG00419,NA12342,NA19473,HG01374,NA12777,NA12776,NA18549,NA18545,NA18542,HG00640,HG00641,HG00357,NA18571,HG00565,NA19780,NA19462,NA19463,HG00160,HuRef,NA19078,HG01070,HG00250,NA12283,NA19371,HG01375,NA19375,HG00280,HG00281,NA11919,NA19648,NA19003,NA19316,NA18530,NA18536,NA19471,HG00173,NA11994,NA11995,NA20525,HG00274,NA20783,HG00326,HG00325,HG01437,HG00323,HG00277,NA19904,HG00554,HG00702,NA20778,HG01124,HG00328,NA20276,HG01047,HG00146,HG01048,HG01365,HG01366,NA18950,NA19327,HG00708,HG01489,HG00237,NA20582,HG00231,NA18947,HG00108,NA12348,HG01354,NA19676,HG01350,NA20796,NA06989,NA20799,NA12749,HG01359,HG00581,HG00137,HG01197,HG00740,HG00731,NA19723,HG00500,NA19084,HG00463,HG00187,NA18632,NA19355,HG00327,NA19722,HG00311,NA18912,HG00116,HG01082,HG00180,NA19439,HG01551,HG00353,HG01052,HG00614,HG00590,HG00693,HG00185,NA19240,HG00699,YH,NA19082,NA20585,NA19057,NA19055,NA20808,NA12763,HG00125,HG00124,NA19834,HG00123,NA18616,HG00443,HG00608,NA18613,HG00251,HG00319,HG01461,HG00449,HG01134,HG00310,NA18592,HG01334,NA20539,NA20530,NA20531,NA20532,NA18577,NA18576,NA20756,NA18573,NA19197,NA20752,NA18570,NA19982,NA18999,NA12044,HG00138,HG00537,HG00253,HG00136,HG00732,HG00252,HG00245,HG00246,HG00247,NA18610,HG00242,NA18582,HG00734,HG00361,NA18611,HG00367,HG00366,NA18856,NA20508,NA19347,HG00736,NA12718,HG00534,NA19453,HG01133,NA19451,NA12842;num_samples_tested=1097;frequency=19.78%;num_unique_samples_tested=1060;nr_frequency=20.47%;PopulationSummary=European 95:Asian 55:Mexican 5:African 27:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 35:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1540947	1540947	.	.	.	ID=gssv302;Name=gssv302;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1540947;inner_start=1540949;inner_end=1541604;outer_end=1541756;inner_rank=8;num_variants=56;variants=nssv708599,nssv708603,essv5401529,essv5409593,essv5415315,essv5449664,essv5451145,essv5464342,essv5498105,essv5517798,essv5526959,essv5527257,essv5530409,essv5565288,essv5622631,essv5624349,essv5661906,essv5671411,essv5691331,essv5717982,essv5732358,essv5732359,essv5766633,essv5792790,essv5826421,essv5828149,essv5842142,essv5872095,essv5918885,essv5923859,essv5931089,essv5966263,essv5979406,essv5984908,essv5998151,essv6084310,essv6139546,essv6200524,essv6205041,essv6205705,essv6215815,essv6222802,essv6246700,essv6255187,essv6261630,essv6282969,essv6285256,essv6301888,essv6301960,essv6316405,essv6407996,essv6453826,essv6488100,essv6532687,essv6574638,nssv708598;num_studies=2;studies=1000GenomesPhase1,Cooper2011;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM;num_samples=56;samples=NA18987,NA20769,NA18519,HG00640,NA12347,HG00100,HG01441,HG00310,HG00232,NA20530,NA20800,HG01095,NA20516,NA20340,sample_nssv708598,HG00251,HG01390,HG01133,HG00312,NA18593,HG00372,HG01070,NA20539,NA20344,HG00329,NA18637,HG00187,NA19443,NA11930,NA11933,NA12748,sample_nssv708603,HG01073,sample_nssv708599,HG00344,HG01125,NA12043,NA11829,HG00118,HG00131,HG00268,HG00269,NA19434,HG01107,HG00613,HG01101,HG01515,HG00436,NA11830,HG01521,HG00160,HG00737,HG00734,HG01365,HG01069,HG00320;num_samples_tested=2555;frequency=2.19%;num_unique_samples_tested=2555;nr_frequency=2.19%;PopulationSummary=European 32:Asian 5:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 14:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1540949	1541604	.	.	.	ID=gssv302;Name=gssv302;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1540947;inner_start=1540949;inner_end=1541604;outer_end=1541756;inner_rank=8;num_variants=56;variants=nssv708599,nssv708603,essv5401529,essv5409593,essv5415315,essv5449664,essv5451145,essv5464342,essv5498105,essv5517798,essv5526959,essv5527257,essv5530409,essv5565288,essv5622631,essv5624349,essv5661906,essv5671411,essv5691331,essv5717982,essv5732358,essv5732359,essv5766633,essv5792790,essv5826421,essv5828149,essv5842142,essv5872095,essv5918885,essv5923859,essv5931089,essv5966263,essv5979406,essv5984908,essv5998151,essv6084310,essv6139546,essv6200524,essv6205041,essv6205705,essv6215815,essv6222802,essv6246700,essv6255187,essv6261630,essv6282969,essv6285256,essv6301888,essv6301960,essv6316405,essv6407996,essv6453826,essv6488100,essv6532687,essv6574638,nssv708598;num_studies=2;studies=1000GenomesPhase1,Cooper2011;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM;num_samples=56;samples=NA18987,NA20769,NA18519,HG00640,NA12347,HG00100,HG01441,HG00310,HG00232,NA20530,NA20800,HG01095,NA20516,NA20340,sample_nssv708598,HG00251,HG01390,HG01133,HG00312,NA18593,HG00372,HG01070,NA20539,NA20344,HG00329,NA18637,HG00187,NA19443,NA11930,NA11933,NA12748,sample_nssv708603,HG01073,sample_nssv708599,HG00344,HG01125,NA12043,NA11829,HG00118,HG00131,HG00268,HG00269,NA19434,HG01107,HG00613,HG01101,HG01515,HG00436,NA11830,HG01521,HG00160,HG00737,HG00734,HG01365,HG01069,HG00320;num_samples_tested=2555;frequency=2.19%;num_unique_samples_tested=2555;nr_frequency=2.19%;PopulationSummary=European 32:Asian 5:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 14:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1541756	1541756	.	.	.	ID=gssv302;Name=gssv302;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1540947;inner_start=1540949;inner_end=1541604;outer_end=1541756;inner_rank=8;num_variants=56;variants=nssv708599,nssv708603,essv5401529,essv5409593,essv5415315,essv5449664,essv5451145,essv5464342,essv5498105,essv5517798,essv5526959,essv5527257,essv5530409,essv5565288,essv5622631,essv5624349,essv5661906,essv5671411,essv5691331,essv5717982,essv5732358,essv5732359,essv5766633,essv5792790,essv5826421,essv5828149,essv5842142,essv5872095,essv5918885,essv5923859,essv5931089,essv5966263,essv5979406,essv5984908,essv5998151,essv6084310,essv6139546,essv6200524,essv6205041,essv6205705,essv6215815,essv6222802,essv6246700,essv6255187,essv6261630,essv6282969,essv6285256,essv6301888,essv6301960,essv6316405,essv6407996,essv6453826,essv6488100,essv6532687,essv6574638,nssv708598;num_studies=2;studies=1000GenomesPhase1,Cooper2011;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM;num_samples=56;samples=NA18987,NA20769,NA18519,HG00640,NA12347,HG00100,HG01441,HG00310,HG00232,NA20530,NA20800,HG01095,NA20516,NA20340,sample_nssv708598,HG00251,HG01390,HG01133,HG00312,NA18593,HG00372,HG01070,NA20539,NA20344,HG00329,NA18637,HG00187,NA19443,NA11930,NA11933,NA12748,sample_nssv708603,HG01073,sample_nssv708599,HG00344,HG01125,NA12043,NA11829,HG00118,HG00131,HG00268,HG00269,NA19434,HG01107,HG00613,HG01101,HG01515,HG00436,NA11830,HG01521,HG00160,HG00737,HG00734,HG01365,HG01069,HG00320;num_samples_tested=2555;frequency=2.19%;num_unique_samples_tested=2555;nr_frequency=2.19%;PopulationSummary=European 32:Asian 5:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 14:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	873391	873391	.	.	.	ID=gssv307;Name=gssv307;variant_type=CNV;variant_sub_type=Loss;outer_start=873391;inner_start=873400;inner_end=874044;outer_end=874049;inner_rank=8;num_variants=11;variants=essv9839569,essv9839570,essv9839571,essv9839572,essv9839573,essv9839574,essv9839575,essv5733502,essv5748399,essv5957539,essv6117771;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=8;samples=NA19012,NA18544,HG00632,NA18643,HG01859,NA19074,HG00543,HG01866;num_samples_tested=3559;frequency=0.22%;num_unique_samples_tested=2562;nr_frequency=0.31%;PopulationSummary=European 0:Asian 8:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	873400	874044	.	.	.	ID=gssv307;Name=gssv307;variant_type=CNV;variant_sub_type=Loss;outer_start=873391;inner_start=873400;inner_end=874044;outer_end=874049;inner_rank=8;num_variants=11;variants=essv9839569,essv9839570,essv9839571,essv9839572,essv9839573,essv9839574,essv9839575,essv5733502,essv5748399,essv5957539,essv6117771;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=8;samples=NA19012,NA18544,HG00632,NA18643,HG01859,NA19074,HG00543,HG01866;num_samples_tested=3559;frequency=0.22%;num_unique_samples_tested=2562;nr_frequency=0.31%;PopulationSummary=European 0:Asian 8:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	874049	874049	.	.	.	ID=gssv307;Name=gssv307;variant_type=CNV;variant_sub_type=Loss;outer_start=873391;inner_start=873400;inner_end=874044;outer_end=874049;inner_rank=8;num_variants=11;variants=essv9839569,essv9839570,essv9839571,essv9839572,essv9839573,essv9839574,essv9839575,essv5733502,essv5748399,essv5957539,essv6117771;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=8;samples=NA19012,NA18544,HG00632,NA18643,HG01859,NA19074,HG00543,HG01866;num_samples_tested=3559;frequency=0.22%;num_unique_samples_tested=2562;nr_frequency=0.31%;PopulationSummary=European 0:Asian 8:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	964980	964980	.	.	.	ID=gssv315;Name=gssv315;variant_type=CNV;variant_sub_type=Loss;outer_start=964980;inner_start=964980;inner_end=965433;outer_end=965488;inner_rank=8;num_variants=2;variants=essv28958,essv9759839;num_studies=2;studies=Ahn2009,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=SJK,sample_essv9759839;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	964980	965433	.	.	.	ID=gssv315;Name=gssv315;variant_type=CNV;variant_sub_type=Loss;outer_start=964980;inner_start=964980;inner_end=965433;outer_end=965488;inner_rank=8;num_variants=2;variants=essv28958,essv9759839;num_studies=2;studies=Ahn2009,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=SJK,sample_essv9759839;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	965488	965488	.	.	.	ID=gssv315;Name=gssv315;variant_type=CNV;variant_sub_type=Loss;outer_start=964980;inner_start=964980;inner_end=965433;outer_end=965488;inner_rank=8;num_variants=2;variants=essv28958,essv9759839;num_studies=2;studies=Ahn2009,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=SJK,sample_essv9759839;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	963966	963966	.	.	.	ID=gssv320;Name=gssv320;variant_type=CNV;variant_sub_type=Loss;outer_start=963966;inner_start=963995;inner_end=964480;outer_end=964480;inner_rank=7;num_variants=32;variants=essv76361,nssv708461,nssv708462,nssv708463,nssv708464,nssv708465,nssv708466,nssv708467,nssv708468,nssv708469,nssv708470,nssv708471,nssv708472,nssv708473,nssv708474,nssv708475,nssv708476,nssv708477,nssv708478,nssv708479,nssv708480,nssv708481,nssv708482,nssv708495,nssv708496,nssv708497,nssv708498,nssv708499,nssv708500,nssv708501,nssv708502,nssv708503;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=32;samples=sample_nssv708502,sample_nssv708495,sample_nssv708478,sample_nssv708479,sample_nssv708482,sample_nssv708472,sample_nssv708473,sample_nssv708470,sample_nssv708471,sample_nssv708476,sample_nssv708477,sample_nssv708474,sample_nssv708475,sample_nssv708499,sample_nssv708497,sample_nssv708503,sample_nssv708496,sample_nssv708469,sample_nssv708468,sample_nssv708481,sample_nssv708480,sample_nssv708501,sample_nssv708461,sample_nssv708498,sample_nssv708463,sample_nssv708462,sample_nssv708465,sample_nssv708464,sample_nssv708467,sample_nssv708466,NA12414,sample_nssv708500;num_samples_tested=1540;frequency=2.08%;num_unique_samples_tested=1540;nr_frequency=2.07%;PopulationSummary=European 32:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	963995	964480	.	.	.	ID=gssv320;Name=gssv320;variant_type=CNV;variant_sub_type=Loss;outer_start=963966;inner_start=963995;inner_end=964480;outer_end=964480;inner_rank=7;num_variants=32;variants=essv76361,nssv708461,nssv708462,nssv708463,nssv708464,nssv708465,nssv708466,nssv708467,nssv708468,nssv708469,nssv708470,nssv708471,nssv708472,nssv708473,nssv708474,nssv708475,nssv708476,nssv708477,nssv708478,nssv708479,nssv708480,nssv708481,nssv708482,nssv708495,nssv708496,nssv708497,nssv708498,nssv708499,nssv708500,nssv708501,nssv708502,nssv708503;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=32;samples=sample_nssv708502,sample_nssv708495,sample_nssv708478,sample_nssv708479,sample_nssv708482,sample_nssv708472,sample_nssv708473,sample_nssv708470,sample_nssv708471,sample_nssv708476,sample_nssv708477,sample_nssv708474,sample_nssv708475,sample_nssv708499,sample_nssv708497,sample_nssv708503,sample_nssv708496,sample_nssv708469,sample_nssv708468,sample_nssv708481,sample_nssv708480,sample_nssv708501,sample_nssv708461,sample_nssv708498,sample_nssv708463,sample_nssv708462,sample_nssv708465,sample_nssv708464,sample_nssv708467,sample_nssv708466,NA12414,sample_nssv708500;num_samples_tested=1540;frequency=2.08%;num_unique_samples_tested=1540;nr_frequency=2.07%;PopulationSummary=European 32:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	964480	964480	.	.	.	ID=gssv320;Name=gssv320;variant_type=CNV;variant_sub_type=Loss;outer_start=963966;inner_start=963995;inner_end=964480;outer_end=964480;inner_rank=7;num_variants=32;variants=essv76361,nssv708461,nssv708462,nssv708463,nssv708464,nssv708465,nssv708466,nssv708467,nssv708468,nssv708469,nssv708470,nssv708471,nssv708472,nssv708473,nssv708474,nssv708475,nssv708476,nssv708477,nssv708478,nssv708479,nssv708480,nssv708481,nssv708482,nssv708495,nssv708496,nssv708497,nssv708498,nssv708499,nssv708500,nssv708501,nssv708502,nssv708503;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=32;samples=sample_nssv708502,sample_nssv708495,sample_nssv708478,sample_nssv708479,sample_nssv708482,sample_nssv708472,sample_nssv708473,sample_nssv708470,sample_nssv708471,sample_nssv708476,sample_nssv708477,sample_nssv708474,sample_nssv708475,sample_nssv708499,sample_nssv708497,sample_nssv708503,sample_nssv708496,sample_nssv708469,sample_nssv708468,sample_nssv708481,sample_nssv708480,sample_nssv708501,sample_nssv708461,sample_nssv708498,sample_nssv708463,sample_nssv708462,sample_nssv708465,sample_nssv708464,sample_nssv708467,sample_nssv708466,NA12414,sample_nssv708500;num_samples_tested=1540;frequency=2.08%;num_unique_samples_tested=1540;nr_frequency=2.07%;PopulationSummary=European 32:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1142700	1142700	.	.	.	ID=gssv322;Name=gssv322;variant_type=CNV;variant_sub_type=Loss;outer_start=1142700;inner_start=1142715;inner_end=1143140;outer_end=1143161;inner_rank=8;num_variants=1235;variants=essv9765394,essv31773,essv9839622,essv9839623,essv9839624,essv9839625,essv9839626,essv9839627,essv9839628,essv9839629,essv9839630,essv9839631,essv9839632,essv9839633,essv9839634,essv9839635,essv9839636,essv9839637,essv9839638,essv9839639,essv9839640,essv9839641,essv9839642,essv9839643,essv9839644,essv9839645,essv9839646,essv9839647,essv9839648,essv9839649,essv9839650,essv9839651,essv9839652,essv9839653,essv9839654,essv9839655,essv9839656,essv9839657,essv9839658,essv9839659,essv9839660,essv9839661,essv9839662,essv9839663,essv9839664,essv9839665,essv9839666,essv9839667,essv9839668,essv9839669,essv9839670,essv9839671,essv9839672,essv9839673,essv9839674,essv9839675,essv9839676,essv9839677,essv9839678,essv9839679,essv9839680,essv9839681,essv9839682,essv9839683,essv9839684,essv9839685,essv9839686,essv9839687,essv9839688,essv9839689,essv9839690,essv9839691,essv9839692,essv9839693,essv9839694,essv9839695,essv9839696,essv9839697,essv9839698,essv9839699,essv9839700,essv9839701,essv9839702,essv9839703,essv9839704,essv9839705,essv9839706,essv9839707,essv9839708,essv9839709,essv9839710,essv9839711,essv9839712,essv9839713,essv9839714,essv9839715,essv9839716,essv9839717,essv9839718,essv9839719,essv9839720,essv9839721,essv9839722,essv9839723,essv9839724,essv9839725,essv9839726,essv9839727,essv9839728,essv9839729,essv9839730,essv9839731,essv9839732,essv9839733,essv9839734,essv9839735,essv9839736,essv9839737,essv9839738,essv9839739,essv9839740,essv9839741,essv9839742,essv9839743,essv9839744,essv9839745,essv9839746,essv9839747,essv9839748,essv9839749,essv9839750,essv9839751,essv9839752,essv9839753,essv9839754,essv9839755,essv9839756,essv9839757,essv9839758,essv9839759,essv9839760,essv9839761,essv9839762,essv9839763,essv9839764,essv9839765,essv9839766,essv9839767,essv9839768,essv9839769,essv9839770,essv9839771,essv9839772,essv9839773,essv9839774,essv9839775,essv9839776,essv9839777,essv9839778,essv9839779,essv9839780,essv9839781,essv9839782,essv9839783,essv9839784,essv9839785,essv9839786,essv9839787,essv9839788,essv9839789,essv9839790,essv9839791,essv9839792,essv9839793,essv9839794,essv9839795,essv9839796,essv9839797,essv9839798,essv9839799,essv9839800,essv9839801,essv9839802,essv9839803,essv9839804,essv9839805,essv9839806,essv9839807,essv9839808,essv9839809,essv9839810,essv9839811,essv9839812,essv9839813,essv9839814,essv9839815,essv9839816,essv9839817,essv9839818,essv9839819,essv9839820,essv9839821,essv9839822,essv9839823,essv9839824,essv9839825,essv9839826,essv9839827,essv9839828,essv9839829,essv9839830,essv9839831,essv9839832,essv9839833,essv9839834,essv9839835,essv9839836,essv9839837,essv9839838,essv9839839,essv9839840,essv9839841,essv9839842,essv9839843,essv9839844,essv9839845,essv9839846,essv9839847,essv9839848,essv9839849,essv9839850,essv9839851,essv9839852,essv9839853,essv9839854,essv9839855,essv9839856,essv9839857,essv9839858,essv9839859,essv9839860,essv9839861,essv9839862,essv9839863,essv9839864,essv9839865,essv9839866,essv9839867,essv9839868,essv9839869,essv9839870,essv9839871,essv9839872,essv9839873,essv9839874,essv9839875,essv9839876,essv9839877,essv9839878,essv9839879,essv9839880,essv9839881,essv9839882,essv9839883,essv9839884,essv9839885,essv9839886,essv9839887,essv9839888,essv9839889,essv9839890,essv9839891,essv9839892,essv9839893,essv9839894,essv9839895,essv9839896,essv9839897,essv9839898,essv9839899,essv9839900,essv9839901,essv9839902,essv9839903,essv9839904,essv9839905,essv9839906,essv9839907,essv9839908,essv9839909,essv9839910,essv9839911,essv9839912,essv9839913,essv9839914,essv9839915,essv9839916,essv9839917,essv9839918,essv9839919,essv9839920,essv9839921,essv9839922,essv9839923,essv9839924,essv9839925,essv9839926,essv9839927,essv9839928,essv9839929,essv9839930,essv9839931,essv9839932,essv9839933,essv9839934,essv9839935,essv9839936,essv9839937,essv9839938,essv9839939,essv9839940,essv9839941,essv9839942,essv9839943,essv9839944,essv9839945,essv9839946,essv9839947,essv9839948,essv9839949,essv9839950,essv9839951,essv9839952,essv9839953,essv9839954,essv9839955,essv9839956,essv9839957,essv9839958,essv9839959,essv9839960,essv9839961,essv9839962,essv9839963,essv9839964,essv9839965,essv9839966,essv9839967,essv9839968,essv9839969,essv9839970,essv9839971,essv9839972,essv9839973,essv9839974,essv9839975,essv9839976,essv9839977,essv9839978,essv9839979,essv9839980,essv9839981,essv9839982,essv9839983,essv9839984,essv9839985,essv9839986,essv9839987,essv9839988,essv9839989,essv9839990,essv9839991,essv9839992,essv9839993,essv9839994,essv9839995,essv9839996,essv9839997,essv9839998,essv9839999,essv9840000,essv9840001,essv9840002,essv9840003,essv9840004,essv9840005,essv9840006,essv9840007,essv9840008,essv9840009,essv9840010,essv9840011,essv9840012,essv9840013,essv9840014,essv9840015,essv9840016,essv9840017,essv9840018,essv9840019,essv9840020,essv9840021,essv9840022,essv9840023,essv9840024,essv9840025,essv9840026,essv9840027,essv9840028,essv9840029,essv9840030,essv9840031,essv9840032,essv9840033,essv9840034,essv9840035,essv9840036,essv9840037,essv9840038,essv9840039,essv9840040,essv9840041,essv9840042,essv9840043,essv9840044,essv9840045,essv9840046,essv9840047,essv9840048,essv9840049,essv9840050,essv9840051,essv9840052,essv9840053,essv9840054,essv9840055,essv9840056,essv9840057,essv9840058,essv9840059,essv9840060,essv9840061,essv9840062,essv9840063,essv9840064,essv9840065,essv9840066,essv9840067,essv9840068,essv9840069,essv9840070,essv9840071,essv9840072,essv9840073,essv9840074,essv9840075,essv9840076,essv9840077,essv9840078,essv9840079,essv9840080,essv9840081,essv9840082,essv9840083,essv9840084,essv9840085,essv9840086,essv9840087,essv9840088,essv9840089,essv9840090,essv9840091,essv9840092,essv9840093,essv9840094,essv9840095,essv9840096,essv9840097,essv9840098,essv9840099,essv9840100,essv9840101,essv9840102,essv9840103,essv9840104,essv9840105,essv9840106,essv9840107,essv9840108,essv9840109,essv9840110,essv9840111,essv9840112,essv9840113,essv9840114,essv9840115,essv9840116,essv9840117,essv9840118,essv9840119,essv9840120,essv9840121,essv9840122,essv9840123,essv9840124,essv9840125,essv9840126,essv9840127,essv9840128,essv9840129,essv9840130,essv9840131,essv9840132,essv9840133,essv9840134,essv9840135,essv9840136,essv9840137,essv9840138,essv9840139,essv9840140,essv9840141,essv9840142,essv9840143,essv9840144,essv9840145,essv9840146,essv9840147,essv9840148,essv9840149,essv9840150,essv9840151,essv9840152,essv9840153,essv9840154,essv9840155,essv9840156,essv9840157,essv9840158,essv9840159,essv9840160,essv9840161,essv9840162,essv9840163,essv9840164,essv9840165,essv9840166,essv9840167,essv9840168,essv9840169,essv9840170,essv9840171,essv9840172,essv9840173,essv9840174,essv9840175,essv9840176,essv9840177,essv9840178,essv9840179,essv9840180,essv9840181,essv9840182,essv9840183,essv9840184,essv9840185,essv9840186,essv9840187,essv9840188,essv9840189,essv9840190,essv9840191,essv9840192,essv9840193,essv9840194,essv9840195,essv9840196,essv9840197,essv9840198,essv9840199,essv9840200,essv9840201,essv9840202,essv9840203,essv9840204,essv9840205,essv9840206,essv9840207,essv9840208,essv9840209,essv9840210,essv9840211,essv9840212,essv9840213,essv9840214,essv9840215,essv9840216,essv9840217,essv9840218,essv9840219,essv9840220,essv9840221,essv9840222,essv9840223,essv9840224,essv9840225,essv9840226,essv9840227,essv9840228,essv9840229,essv9840230,essv9840231,essv9840232,essv9840233,essv9840234,essv9840235,essv9840236,essv9840237,essv9840238,essv9840239,essv9840240,essv9840241,essv9840242,essv9840243,essv9840244,essv9840245,essv9840246,essv9840247,essv9840248,essv9840249,essv9840250,essv9840251,essv9840252,essv9840253,essv9840254,essv9840255,essv9840256,essv9840257,essv9840258,essv9840259,essv9840260,essv9840261,essv9840262,essv9840263,essv9840264,essv9840265,essv9840266,essv9840267,essv9840268,essv9840269,essv9840270,essv9840271,essv9840272,essv9840273,essv9840274,essv9840275,essv9840276,essv9840277,essv9840278,essv9840279,essv9840280,essv9840281,essv9840282,essv9840283,essv9840284,essv9840285,essv9840286,essv9840287,essv9840288,essv9840289,essv9840290,essv9840291,essv9840292,essv9840293,essv9840294,essv9840295,essv9840296,essv9840297,essv9840298,essv9840299,essv9840300,essv9840301,essv9840302,essv9840303,essv9840304,essv9840305,essv9840306,essv9840307,essv9840308,essv9840309,essv9840310,essv9840311,essv9840312,essv9840313,essv9840314,essv9840315,essv9840316,essv9840317,essv9840318,essv9840319,essv9840320,essv9840321,essv9840322,essv9840323,essv9840324,essv9840325,essv9840326,essv9840327,essv9840328,essv9840329,essv9840330,essv9840331,essv9840332,essv9840333,essv9840334,essv9840335,essv9840336,essv9840337,essv9840338,essv9840339,essv9840340,essv9840341,essv9840342,essv9840343,essv9840344,essv9840345,essv9840346,essv9840347,essv9840348,essv9840349,essv9840350,essv9840351,essv9840352,essv9840353,essv9840354,essv9840355,essv9840356,essv9840357,essv9840358,essv9840359,essv9840360,essv9840361,essv9840362,essv9840363,essv9840364,essv9840365,essv9840366,essv9840367,essv9840368,essv9840369,essv9840370,essv9840371,essv9840372,essv9840373,essv9840374,essv9840375,essv9840376,essv9840377,essv9840378,essv9840379,essv9840380,essv9840381,essv9840382,essv9840383,essv9840384,essv9840385,essv9840386,essv9840387,essv9840388,essv9840389,essv9840390,essv9840391,essv9840392,essv9840393,essv9840394,essv9840395,essv9840396,essv9840397,essv9840398,essv9840399,essv9840400,essv9840401,essv9840402,essv9840403,essv9840404,essv9840405,essv9840406,essv9840407,essv9840408,essv9840409,essv9840410,essv9840411,essv9840412,essv9840413,essv9840414,essv9840415,essv9840416,essv9840417,essv9840418,essv9840419,essv9840420,essv9840421,essv9840422,essv9840423,essv9840424,essv9840425,essv9840426,essv9840427,essv9840428,essv9840429,essv9840430,essv9840431,essv9840432,essv9840433,essv9840434,essv9840435,essv9840436,essv9840437,essv9840438,essv9840439,essv9840440,essv9840441,essv9840442,essv9840443,essv9840444,essv9840445,essv9840446,essv9840447,essv9840448,essv9840449,essv9840450,essv9840451,essv9840452,essv9840453,essv9840454,essv9840455,essv9840456,essv9840457,essv9840458,essv9840459,essv9840460,essv9840461,essv9840462,essv9840463,essv9840464,essv9840465,essv9840466,essv9840467,essv9840468,essv9840469,essv9840470,essv9840471,essv9840472,essv9840473,essv9840474,essv9840475,essv9840476,essv9840477,essv9840478,essv9840479,essv9840480,essv9840481,essv9840482,essv9840483,essv9840484,essv9840485,essv9840486,essv9840487,essv9840488,essv9840489,essv9840490,essv9840491,essv9840492,essv9840493,essv9840494,essv9840495,essv9840496,essv9840497,essv9840498,essv9840499,essv9840500,essv9840501,essv9840502,essv9840503,essv9840504,essv9840505,essv9840506,essv9840507,essv9840508,essv9840509,essv9840510,essv9840511,essv9840512,essv9840513,essv9840514,essv9840515,essv9840516,essv9840517,essv9840518,essv9840519,essv9840520,essv9840521,essv9840522,essv9840523,essv9840524,essv9840525,essv9840526,essv9840527,essv9840528,essv9840529,essv9840530,essv9840531,essv9840532,essv9840533,essv9840534,essv9840535,essv9840536,essv9840537,essv9840538,essv9840539,essv9840540,essv5398394,essv5407641,essv5410354,essv5411481,essv5420730,essv5424544,essv5426116,essv5429106,essv5431171,essv5434081,essv5456664,essv5459892,essv5465256,essv5467001,essv5467091,essv5468369,essv5469789,essv5470790,essv5471121,essv5471360,essv5471503,essv5479749,essv5479850,essv5488749,essv5490777,essv5491686,essv5492773,essv5496017,essv5496511,essv5498166,essv5499361,essv5503996,essv5509795,essv5513375,essv5514109,essv5515576,essv5517206,essv5517797,essv5518716,essv5525837,essv5535991,essv5545854,essv5548255,essv5559069,essv5559627,essv5565444,essv5568792,essv5577522,essv5577785,essv5578554,essv5578606,essv5583578,essv5594683,essv5596504,essv5602057,essv5607310,essv5615034,essv5615341,essv5615345,essv5616249,essv5616664,essv5618107,essv5623261,essv5633920,essv5638447,essv5644417,essv5648964,essv5649812,essv5652419,essv5655953,essv5656577,essv5657226,essv5660197,essv5663198,essv5674877,essv5702989,essv5703075,essv5706433,essv5711626,essv5713207,essv5721341,essv5726618,essv5732879,essv5733303,essv5738934,essv5740683,essv5742494,essv5746061,essv5746960,essv5748924,essv5750987,essv5751448,essv5752385,essv5757575,essv5783493,essv5790385,essv5793601,essv5795930,essv5796220,essv5803129,essv5804443,essv5812347,essv5817051,essv5817920,essv5825826,essv5828027,essv5830102,essv5832123,essv5834192,essv5834705,essv5836591,essv5841447,essv5843050,essv5845678,essv5850739,essv5859573,essv5863471,essv5864128,essv5867308,essv5874172,essv5883227,essv5883717,essv5885018,essv5885998,essv5887466,essv5887860,essv5888259,essv5898963,essv5901085,essv5903725,essv5904698,essv5905120,essv5909372,essv5910221,essv5910672,essv5914728,essv5919286,essv5922588,essv5933284,essv5936962,essv5938008,essv5938197,essv5941008,essv5941170,essv5944582,essv5945444,essv5948251,essv5950163,essv5971444,essv5973359,essv5973645,essv5974899,essv5977635,essv5978628,essv5985350,essv5991660,essv5995640,essv5999100,essv6001217,essv6001694,essv6013025,essv6014100,essv6021886,essv6025649,essv6026203,essv6045437,essv6051065,essv6056766,essv6063198,essv6064219,essv6067469,essv6074043,essv6083679,essv6100913,essv6101186,essv6101258,essv6101279,essv6104290,essv6114438,essv6118569,essv6123419,essv6128686,essv6143825,essv6144046,essv6146097,essv6149675,essv6151804,essv6158659,essv6163227,essv6173656,essv6174159,essv6177899,essv6181789,essv6188254,essv6194663,essv6199767,essv6204433,essv6205811,essv6207338,essv6208875,essv6215106,essv6217750,essv6220496,essv6220846,essv6223357,essv6224800,essv6226006,essv6226909,essv6228976,essv6231889,essv6234077,essv6237721,essv6241074,essv6243422,essv6244536,essv6252430,essv6256029,essv6258016,essv6260022,essv6262209,essv6262943,essv6265257,essv6275996,essv6276421,essv6278188,essv6278709,essv6280172,essv6286183,essv6295641,essv6300674,essv6315900,essv6320340,essv6320910,essv6325266,essv6327643,essv6335967,essv6336469,essv6339144,essv6341849,essv6349629,essv6350182,essv6351628,essv6352121,essv6354596,essv6359108,essv6360631,essv6363574,essv6364636,essv6368218,essv6368260,essv6375782,essv6377477,essv6381288,essv6386945,essv6390017,essv6392240,essv6396639,essv6396964,essv6400391,essv6406899,essv6409217,essv6414527,essv6414667,essv6414705,essv6420303,essv6424641,essv6426568,essv6428860,essv6434770,essv6437150,essv6437407,essv6438293,essv6439682,essv6445344,essv6446815,essv6447551,essv6448880,essv6456001,essv6457377,essv6458867,essv6460089,essv6460871,essv6463915,essv6471445,essv6474836,essv6480469,essv6488935,essv6493220,essv6498297,essv6502810,essv6513521,essv6522474,essv6524753,essv6529541,essv6531799,essv6532865,essv6537251,essv6538355,essv6538666,essv6538862,essv6539319,essv6542299,essv6553185,essv6553343,essv6557644,essv6560586,essv6561033,essv6564758,essv6567171,essv6578498,essv6580334,essv6582863,essv6583114,essv6591878;num_studies=4;studies=1000GenomesPhase1,Ahn2009,Boomsma2014,1000GenomesPhase3;num_platforms=4;platforms=Illumina_GA,Multiple_NGS_Sequencing,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=4;algorithms=PEM,PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=939;samples=NA19676,NA18632,NA18987,HG01997,NA18964,HG01992,HG01991,NA20822,HG02502,HG03718,HG03838,HG03686,HG00275,NA20767,HG03832,HG01393,HG00373,HG03689,HG04047,NA19776,HG00427,HG00421,HG00422,NA20892,HG00543,HG00542,HG00428,NA12144,NA18553,NA18552,NA18555,NA18559,NA18558,NA19057,NA19065,NA19773,HG02238,HG01456,HG02470,HG04001,HG04164,HG01459,HG02479,HG04162,HG02277,HG01519,HG02274,HG01260,HG02271,HG02379,NA18536,HG03999,HG02375,HG02373,HG02278,HG01066,HG03593,HG01064,HG01063,NA18611,NA19072,HG03598,HG01305,HG01302,NA19078,HG01069,HG03773,NA20847,HG02512,HG02513,HG03793,NA19785,HG03019,NA19083,HG03012,NA19649,HG03778,HG01028,HG04222,NA11918,HG02017,HG02016,HG02152,HG02153,HG02150,HG02151,HG02156,HG03931,HG02154,HG02155,HG01603,NA18954,NA18957,HG01600,NA18951,HG02603,HG01605,HG03681,NA18959,HG01167,NA18747,HG03706,NA18602,HG01768,HG03703,NA19759,HG03708,HG01761,NA21097,HG04189,HG03557,NA19086,HG00234,HG00236,HG03785,HG02122,HG02121,HG02088,HG00589,HG02081,HG02082,HG00584,HG00583,HG02085,HG01111,HG01110,HG00740,NA19085,NA19788,HG00463,HG00464,NA19747,HG01497,HG01494,HG01495,HG01492,NA20899,NA19741,HG01491,HG03890,HG03895,NA19011,HG01948,HG02057,HG03800,HG01941,HG01942,HG01944,HG01945,HG01947,HG03803,HG03802,HG01341,NA18619,HG03805,HG00306,HG02232,HG01348,HG03808,NA18609,NA18608,HG01029,HG01187,HG02783,HG03969,HG01182,NA19735,HG03965,NA18603,HG03967,HG03960,NA19082,NA20585,HG03625,NA18550,NA20589,HG03624,HG00577,HG00128,HG04131,NA21111,HG00120,HG00672,HG02102,HG02429,HG01462,HG02425,HG04033,HG02420,HG01464,HG02032,NA20127,NA11843,NA21119,HG01139,NA18981,NA21110,NA21114,NA18999,HG02522,HG02521,HG02649,NA18991,NA18990,NA18993,NA18992,NA18994,NA18997,NA07048,HG02079,NA20796,NA19728,HG00631,HG00632,HG00635,HG00634,NA19746,HG00476,HG03858,HG00881,NA18967,NA07346,HG02166,HG02165,HG02164,HG02283,HG02286,HG00864,HG01848,HG02734,HG02048,HG01841,HG01840,HG01843,HG02047,HG01845,HG01844,HG01847,HG01795,HG01794,HG00707,HG01796,HG00701,HG00512,HG02050,NA19682,HG02075,NA19681,HG01799,HG00708,NA19684,NA19088,NA19443,NA19664,NA19794,HG01597,NA19663,HG01599,HG01598,HG01980,HG02275,HG01982,NA18525,NA18998,HG00346,HG02272,HG03692,NA18942,HG03690,HG03696,NA18648,HG00269,HG00266,HG00267,HG00264,NA18646,HG00262,NA18940,NA18643,NA18642,HG00410,NA18941,HG00419,HG00551,NA20911,HG00556,HG00557,NA06994,NA19012,HG03096,NA18549,NA18546,NA18547,NA18545,NA12760,NA18543,NA18541,NA19762,HG01935,HG04076,HG01939,HG01938,HG02371,HG01528,NA19764,HG01272,HG02265,HG02266,HG01277,HG02262,HG01275,HG02301,NA19077,HG02304,NA19063,NA19060,HG01378,HG01070,NA19067,NA19064,HG03589,NA21102,HG01377,HG01079,NA19070,HG00335,HG03874,NA20872,HG03789,HG03784,HG00674,HG00671,HG00179,NA20783,HG01435,HG01437,NA20786,HG01432,HG02410,NA19079,HG01205,HG01204,HG01200,NA20278,HG02002,HG02003,HG01809,HG01808,NA19719,HG02008,HG01804,HG01807,HG01806,HG01801,HG01802,HG04161,NA18943,HG01612,HG01613,NA18946,NA18947,NA18944,NA18949,NA19654,HG03733,NA20832,HG00445,HG03738,HG01757,HG04194,HG02086,HG00182,NA18639,HG01191,NA19722,NA19732,HG01892,HG01893,HG00956,HG02139,NA18635,HG02136,HG00384,HG02133,NA20897,HG00457,NA18934,HG00451,HG00599,HG00452,HG01104,HG00595,HG00596,HG00590,HG00458,HG00592,NA19081,HG00693,HG00692,HG00759,NA12155,HG00699,HG00698,HG01974,HG01977,HG03743,HG01971,HG01970,HG01973,sample_essv9765394,NA11894,HG01979,NA19056,NA19055,HG03745,HG03796,HG03949,HG02181,HG02180,HG03812,HG02182,HG00253,HG02184,HG00318,HG00250,NA18595,HG02188,NA18597,HG00315,NA18591,HG00313,NA18618,HG00258,NA21130,HG00525,NA18757,HG01031,HG02105,HG03955,NA18630,NA18577,NA18576,NA18573,NA18571,NA18579,NA19780,HG02087,HG02348,HG04144,HG02104,HG00130,HG00136,NA18612,HG01571,HG02355,HG02356,HG01572,HG02351,HG00111,HG01578,HG04026,HG02450,HG04020,NA19091,HG01247,NA19789,NA20507,NA18986,HG03851,NA18984,NA18985,NA18982,NA18983,NA12829,NA12828,HG03911,NA18989,HG00626,NA07056,HG00625,HG00622,HG00623,HG00620,NA20299,HG03634,HG01710,HG00628,HG00629,NA12383,HG02690,NA19770,HG00143,HG00141,NA18976,NA20890,HG04090,NA18596,HG04094,HG04099,HG01857,HG01855,HG01852,HG01853,HG01850,HG01851,HG02178,HG02179,HG02696,NA20895,HG01858,HG00851,HG02078,HG03619,NA18874,HG01148,HG02070,HG02073,HG02072,HG01122,NA20314,HG02076,HG01849,NA18978,HG01786,HG00717,NA20904,NA18973,NA18972,NA18971,NA18970,NA18977,HG04152,NA18975,NA18974,HG00982,NA21105,NA18613,HG02383,HG02382,NA18950,HG02380,NA19655,HG02386,HG02385,HG02384,NA19658,HG02389,NA19006,NA06985,HG00353,NA18538,NA20582,HG03604,HG00358,HG03607,NA21089,NA21088,HG04206,HG00566,HG04200,HG00560,HG04202,HG02040,NA19679,HG03916,HG03663,HG04209,HG03913,HG03600,HG00766,HG00409,HG02699,HG00407,HG00404,HG00403,NA19004,NA19005,NA18539,NA18530,NA19000,NA19001,NA19002,HG00704,NA18533,NA18531,HG00690,NA18537,HG01797,NA18534,HG04061,HG04062,HG01536,HG00501,HG01926,HG01927,HG01924,HG02494,HG01923,HG01920,HG01921,HG02250,HG02252,NA12005,NA20510,NA19076,HG02259,HG02312,HG00328,HG01369,HG04063,HG01047,HG03985,NA18627,HG01048,HG01362,HG03862,NA18623,HG03864,NA18621,HG03866,NA20869,NA20318,NA18953,NA19755,NA19749,NA20317,NA20866,NA20867,NA20864,HG01798,NA19058,NA20518,NA12341,HG00662,NA19750,HG02406,HG01402,HG01405,HG02401,HG02402,NA20798,HG02409,NA19066,HG02491,HG02490,HG01812,HG01813,HG01810,HG01811,HG02031,HG01817,HG01815,HG02661,NA20819,NA20818,HG03998,NA19054,NA20812,NA18647,HG00619,HG03729,HG00614,HG00613,HG00611,HG00610,HG00190,NA21141,HG03943,NA20887,NA12718,HG01869,HG01868,HG01867,HG01866,HG01865,HG01864,HG01863,HG01862,HG01861,HG01860,HG00442,HG00443,NA20807,HG00446,NA20881,HG00338,HG00448,HG01136,HG00684,HG00729,HG00728,HG00683,HG00689,HG03826,NA18616,HG01961,HG01967,NA18617,HG01968,NA18628,NA18614,HG02215,HG03437,NA18615,NA12043,NA18626,HG03814,NA18625,HG03815,HG03762,HG00246,HG03989,HG02187,HG03940,NA18582,HG00362,HG02186,HG00366,HG02190,HG00364,HG00437,HG00436,NA18748,NA18749,HG00536,HG00537,HG00534,NA18620,NA18740,HG00533,HG00530,HG00531,NA18566,HG02223,NA18560,HG01917,HG01444,HG01447,HG04153,HG01440,HG04156,HG04158,NA18592,HG01918,HG02360,HG02364,HG02367,HG04017,HG01311,HG01259,HG03844,HG03645,HG01250,HG01251,HG01253,HG01254,HG01257,NA20852,NA19084,NA20854,HG00879,NA19731,NA12830,NA20770,NA19087,HG00653,HG00651,HG00650,HG03767,HG01702,HG01700,HG01705,HG03009,HG00158,HG00154,HG03695,HG03007,HG00151,HG00152,HG03928,NA18644,HG03698,HG02064,HG00290,NA19652,HG02060,HG02061,NA18641,HG02147,HG02146,HG02141,HG02069,HG03646,NA12889,HG01174,HG00844,HG01176,HG01171,HG02298,NA18968,HG03716,NA19734,HG03711,HG00559,NA18960,NA18961,NA18962,NA18963,HG01773,NA18965,NA18966,HG01770,NA12283,NA12286,HG02390,HG02391,HG02392,HG02395,HG02396,HG02397,HG02398,HG02399,NA20792,HG02407,HG00418,NA12749,NA21098,NA19657,NA20795,HG04235,NA19080,HG00578,HG00479,HG00478,HG03640,HG00473,HG00472,HG02685,HG02682,HG01686,HG00475,NA19900,NA18528,HG04225,HG02084,HG03886,NA18526,HG03644,HG01489,HG01488,HG00581,HG01953,HG03235,HG01951,HG01950,HG01354,HG01357,HG01356,HG01351,HG03873,NA19010,HG01359,HG01080,NA18638,HG01083,HG01058,HG00500,HG03977,HG03976,HG01054,HG01055,HG03973,NA18631,HG03629,NA18633,NA12413,NA18548,NA18634,SJK,HG00115,HG00116,HG00118,HG02142,NA20412,HG04029,HG01556,NA20870,HG01550,HG02353,HG01413,HG03490,NA20529,NA20908,HG02029,NA21128,HG03899,HG02023,NA18636,HG02026,HG02025,NA20809,NA20804,HG02654,NA18599,NA20800,HG01177,NA18910,HG00608,NA12249,HG03757,HG03755,HG02035,NA19009,NA12874,HG02790,HG02116,HG02299,HG02113,NA18969,NA21133,HG02291,HG02292,HG03631,HG01124,HG01125,HG01878,HG01879,HG00978,HG02058,HG01874,HG01086,HG01870,HG01871,HG01872,HG01873,HG02728,NA12273,NA19758,HG02727;num_samples_tested=4327;frequency=21.7%;num_unique_samples_tested=3330;nr_frequency=28.19%;PopulationSummary=European 119:Asian 573:Mexican 38:African 23:Admixed 0:MiddleEast 0:NativeAmerican 33:NorthAmerican 15:SouthAmerican 138:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1142715	1143140	.	.	.	ID=gssv322;Name=gssv322;variant_type=CNV;variant_sub_type=Loss;outer_start=1142700;inner_start=1142715;inner_end=1143140;outer_end=1143161;inner_rank=8;num_variants=1235;variants=essv9765394,essv31773,essv9839622,essv9839623,essv9839624,essv9839625,essv9839626,essv9839627,essv9839628,essv9839629,essv9839630,essv9839631,essv9839632,essv9839633,essv9839634,essv9839635,essv9839636,essv9839637,essv9839638,essv9839639,essv9839640,essv9839641,essv9839642,essv9839643,essv9839644,essv9839645,essv9839646,essv9839647,essv9839648,essv9839649,essv9839650,essv9839651,essv9839652,essv9839653,essv9839654,essv9839655,essv9839656,essv9839657,essv9839658,essv9839659,essv9839660,essv9839661,essv9839662,essv9839663,essv9839664,essv9839665,essv9839666,essv9839667,essv9839668,essv9839669,essv9839670,essv9839671,essv9839672,essv9839673,essv9839674,essv9839675,essv9839676,essv9839677,essv9839678,essv9839679,essv9839680,essv9839681,essv9839682,essv9839683,essv9839684,essv9839685,essv9839686,essv9839687,essv9839688,essv9839689,essv9839690,essv9839691,essv9839692,essv9839693,essv9839694,essv9839695,essv9839696,essv9839697,essv9839698,essv9839699,essv9839700,essv9839701,essv9839702,essv9839703,essv9839704,essv9839705,essv9839706,essv9839707,essv9839708,essv9839709,essv9839710,essv9839711,essv9839712,essv9839713,essv9839714,essv9839715,essv9839716,essv9839717,essv9839718,essv9839719,essv9839720,essv9839721,essv9839722,essv9839723,essv9839724,essv9839725,essv9839726,essv9839727,essv9839728,essv9839729,essv9839730,essv9839731,essv9839732,essv9839733,essv9839734,essv9839735,essv9839736,essv9839737,essv9839738,essv9839739,essv9839740,essv9839741,essv9839742,essv9839743,essv9839744,essv9839745,essv9839746,essv9839747,essv9839748,essv9839749,essv9839750,essv9839751,essv9839752,essv9839753,essv9839754,essv9839755,essv9839756,essv9839757,essv9839758,essv9839759,essv9839760,essv9839761,essv9839762,essv9839763,essv9839764,essv9839765,essv9839766,essv9839767,essv9839768,essv9839769,essv9839770,essv9839771,essv9839772,essv9839773,essv9839774,essv9839775,essv9839776,essv9839777,essv9839778,essv9839779,essv9839780,essv9839781,essv9839782,essv9839783,essv9839784,essv9839785,essv9839786,essv9839787,essv9839788,essv9839789,essv9839790,essv9839791,essv9839792,essv9839793,essv9839794,essv9839795,essv9839796,essv9839797,essv9839798,essv9839799,essv9839800,essv9839801,essv9839802,essv9839803,essv9839804,essv9839805,essv9839806,essv9839807,essv9839808,essv9839809,essv9839810,essv9839811,essv9839812,essv9839813,essv9839814,essv9839815,essv9839816,essv9839817,essv9839818,essv9839819,essv9839820,essv9839821,essv9839822,essv9839823,essv9839824,essv9839825,essv9839826,essv9839827,essv9839828,essv9839829,essv9839830,essv9839831,essv9839832,essv9839833,essv9839834,essv9839835,essv9839836,essv9839837,essv9839838,essv9839839,essv9839840,essv9839841,essv9839842,essv9839843,essv9839844,essv9839845,essv9839846,essv9839847,essv9839848,essv9839849,essv9839850,essv9839851,essv9839852,essv9839853,essv9839854,essv9839855,essv9839856,essv9839857,essv9839858,essv9839859,essv9839860,essv9839861,essv9839862,essv9839863,essv9839864,essv9839865,essv9839866,essv9839867,essv9839868,essv9839869,essv9839870,essv9839871,essv9839872,essv9839873,essv9839874,essv9839875,essv9839876,essv9839877,essv9839878,essv9839879,essv9839880,essv9839881,essv9839882,essv9839883,essv9839884,essv9839885,essv9839886,essv9839887,essv9839888,essv9839889,essv9839890,essv9839891,essv9839892,essv9839893,essv9839894,essv9839895,essv9839896,essv9839897,essv9839898,essv9839899,essv9839900,essv9839901,essv9839902,essv9839903,essv9839904,essv9839905,essv9839906,essv9839907,essv9839908,essv9839909,essv9839910,essv9839911,essv9839912,essv9839913,essv9839914,essv9839915,essv9839916,essv9839917,essv9839918,essv9839919,essv9839920,essv9839921,essv9839922,essv9839923,essv9839924,essv9839925,essv9839926,essv9839927,essv9839928,essv9839929,essv9839930,essv9839931,essv9839932,essv9839933,essv9839934,essv9839935,essv9839936,essv9839937,essv9839938,essv9839939,essv9839940,essv9839941,essv9839942,essv9839943,essv9839944,essv9839945,essv9839946,essv9839947,essv9839948,essv9839949,essv9839950,essv9839951,essv9839952,essv9839953,essv9839954,essv9839955,essv9839956,essv9839957,essv9839958,essv9839959,essv9839960,essv9839961,essv9839962,essv9839963,essv9839964,essv9839965,essv9839966,essv9839967,essv9839968,essv9839969,essv9839970,essv9839971,essv9839972,essv9839973,essv9839974,essv9839975,essv9839976,essv9839977,essv9839978,essv9839979,essv9839980,essv9839981,essv9839982,essv9839983,essv9839984,essv9839985,essv9839986,essv9839987,essv9839988,essv9839989,essv9839990,essv9839991,essv9839992,essv9839993,essv9839994,essv9839995,essv9839996,essv9839997,essv9839998,essv9839999,essv9840000,essv9840001,essv9840002,essv9840003,essv9840004,essv9840005,essv9840006,essv9840007,essv9840008,essv9840009,essv9840010,essv9840011,essv9840012,essv9840013,essv9840014,essv9840015,essv9840016,essv9840017,essv9840018,essv9840019,essv9840020,essv9840021,essv9840022,essv9840023,essv9840024,essv9840025,essv9840026,essv9840027,essv9840028,essv9840029,essv9840030,essv9840031,essv9840032,essv9840033,essv9840034,essv9840035,essv9840036,essv9840037,essv9840038,essv9840039,essv9840040,essv9840041,essv9840042,essv9840043,essv9840044,essv9840045,essv9840046,essv9840047,essv9840048,essv9840049,essv9840050,essv9840051,essv9840052,essv9840053,essv9840054,essv9840055,essv9840056,essv9840057,essv9840058,essv9840059,essv9840060,essv9840061,essv9840062,essv9840063,essv9840064,essv9840065,essv9840066,essv9840067,essv9840068,essv9840069,essv9840070,essv9840071,essv9840072,essv9840073,essv9840074,essv9840075,essv9840076,essv9840077,essv9840078,essv9840079,essv9840080,essv9840081,essv9840082,essv9840083,essv9840084,essv9840085,essv9840086,essv9840087,essv9840088,essv9840089,essv9840090,essv9840091,essv9840092,essv9840093,essv9840094,essv9840095,essv9840096,essv9840097,essv9840098,essv9840099,essv9840100,essv9840101,essv9840102,essv9840103,essv9840104,essv9840105,essv9840106,essv9840107,essv9840108,essv9840109,essv9840110,essv9840111,essv9840112,essv9840113,essv9840114,essv9840115,essv9840116,essv9840117,essv9840118,essv9840119,essv9840120,essv9840121,essv9840122,essv9840123,essv9840124,essv9840125,essv9840126,essv9840127,essv9840128,essv9840129,essv9840130,essv9840131,essv9840132,essv9840133,essv9840134,essv9840135,essv9840136,essv9840137,essv9840138,essv9840139,essv9840140,essv9840141,essv9840142,essv9840143,essv9840144,essv9840145,essv9840146,essv9840147,essv9840148,essv9840149,essv9840150,essv9840151,essv9840152,essv9840153,essv9840154,essv9840155,essv9840156,essv9840157,essv9840158,essv9840159,essv9840160,essv9840161,essv9840162,essv9840163,essv9840164,essv9840165,essv9840166,essv9840167,essv9840168,essv9840169,essv9840170,essv9840171,essv9840172,essv9840173,essv9840174,essv9840175,essv9840176,essv9840177,essv9840178,essv9840179,essv9840180,essv9840181,essv9840182,essv9840183,essv9840184,essv9840185,essv9840186,essv9840187,essv9840188,essv9840189,essv9840190,essv9840191,essv9840192,essv9840193,essv9840194,essv9840195,essv9840196,essv9840197,essv9840198,essv9840199,essv9840200,essv9840201,essv9840202,essv9840203,essv9840204,essv9840205,essv9840206,essv9840207,essv9840208,essv9840209,essv9840210,essv9840211,essv9840212,essv9840213,essv9840214,essv9840215,essv9840216,essv9840217,essv9840218,essv9840219,essv9840220,essv9840221,essv9840222,essv9840223,essv9840224,essv9840225,essv9840226,essv9840227,essv9840228,essv9840229,essv9840230,essv9840231,essv9840232,essv9840233,essv9840234,essv9840235,essv9840236,essv9840237,essv9840238,essv9840239,essv9840240,essv9840241,essv9840242,essv9840243,essv9840244,essv9840245,essv9840246,essv9840247,essv9840248,essv9840249,essv9840250,essv9840251,essv9840252,essv9840253,essv9840254,essv9840255,essv9840256,essv9840257,essv9840258,essv9840259,essv9840260,essv9840261,essv9840262,essv9840263,essv9840264,essv9840265,essv9840266,essv9840267,essv9840268,essv9840269,essv9840270,essv9840271,essv9840272,essv9840273,essv9840274,essv9840275,essv9840276,essv9840277,essv9840278,essv9840279,essv9840280,essv9840281,essv9840282,essv9840283,essv9840284,essv9840285,essv9840286,essv9840287,essv9840288,essv9840289,essv9840290,essv9840291,essv9840292,essv9840293,essv9840294,essv9840295,essv9840296,essv9840297,essv9840298,essv9840299,essv9840300,essv9840301,essv9840302,essv9840303,essv9840304,essv9840305,essv9840306,essv9840307,essv9840308,essv9840309,essv9840310,essv9840311,essv9840312,essv9840313,essv9840314,essv9840315,essv9840316,essv9840317,essv9840318,essv9840319,essv9840320,essv9840321,essv9840322,essv9840323,essv9840324,essv9840325,essv9840326,essv9840327,essv9840328,essv9840329,essv9840330,essv9840331,essv9840332,essv9840333,essv9840334,essv9840335,essv9840336,essv9840337,essv9840338,essv9840339,essv9840340,essv9840341,essv9840342,essv9840343,essv9840344,essv9840345,essv9840346,essv9840347,essv9840348,essv9840349,essv9840350,essv9840351,essv9840352,essv9840353,essv9840354,essv9840355,essv9840356,essv9840357,essv9840358,essv9840359,essv9840360,essv9840361,essv9840362,essv9840363,essv9840364,essv9840365,essv9840366,essv9840367,essv9840368,essv9840369,essv9840370,essv9840371,essv9840372,essv9840373,essv9840374,essv9840375,essv9840376,essv9840377,essv9840378,essv9840379,essv9840380,essv9840381,essv9840382,essv9840383,essv9840384,essv9840385,essv9840386,essv9840387,essv9840388,essv9840389,essv9840390,essv9840391,essv9840392,essv9840393,essv9840394,essv9840395,essv9840396,essv9840397,essv9840398,essv9840399,essv9840400,essv9840401,essv9840402,essv9840403,essv9840404,essv9840405,essv9840406,essv9840407,essv9840408,essv9840409,essv9840410,essv9840411,essv9840412,essv9840413,essv9840414,essv9840415,essv9840416,essv9840417,essv9840418,essv9840419,essv9840420,essv9840421,essv9840422,essv9840423,essv9840424,essv9840425,essv9840426,essv9840427,essv9840428,essv9840429,essv9840430,essv9840431,essv9840432,essv9840433,essv9840434,essv9840435,essv9840436,essv9840437,essv9840438,essv9840439,essv9840440,essv9840441,essv9840442,essv9840443,essv9840444,essv9840445,essv9840446,essv9840447,essv9840448,essv9840449,essv9840450,essv9840451,essv9840452,essv9840453,essv9840454,essv9840455,essv9840456,essv9840457,essv9840458,essv9840459,essv9840460,essv9840461,essv9840462,essv9840463,essv9840464,essv9840465,essv9840466,essv9840467,essv9840468,essv9840469,essv9840470,essv9840471,essv9840472,essv9840473,essv9840474,essv9840475,essv9840476,essv9840477,essv9840478,essv9840479,essv9840480,essv9840481,essv9840482,essv9840483,essv9840484,essv9840485,essv9840486,essv9840487,essv9840488,essv9840489,essv9840490,essv9840491,essv9840492,essv9840493,essv9840494,essv9840495,essv9840496,essv9840497,essv9840498,essv9840499,essv9840500,essv9840501,essv9840502,essv9840503,essv9840504,essv9840505,essv9840506,essv9840507,essv9840508,essv9840509,essv9840510,essv9840511,essv9840512,essv9840513,essv9840514,essv9840515,essv9840516,essv9840517,essv9840518,essv9840519,essv9840520,essv9840521,essv9840522,essv9840523,essv9840524,essv9840525,essv9840526,essv9840527,essv9840528,essv9840529,essv9840530,essv9840531,essv9840532,essv9840533,essv9840534,essv9840535,essv9840536,essv9840537,essv9840538,essv9840539,essv9840540,essv5398394,essv5407641,essv5410354,essv5411481,essv5420730,essv5424544,essv5426116,essv5429106,essv5431171,essv5434081,essv5456664,essv5459892,essv5465256,essv5467001,essv5467091,essv5468369,essv5469789,essv5470790,essv5471121,essv5471360,essv5471503,essv5479749,essv5479850,essv5488749,essv5490777,essv5491686,essv5492773,essv5496017,essv5496511,essv5498166,essv5499361,essv5503996,essv5509795,essv5513375,essv5514109,essv5515576,essv5517206,essv5517797,essv5518716,essv5525837,essv5535991,essv5545854,essv5548255,essv5559069,essv5559627,essv5565444,essv5568792,essv5577522,essv5577785,essv5578554,essv5578606,essv5583578,essv5594683,essv5596504,essv5602057,essv5607310,essv5615034,essv5615341,essv5615345,essv5616249,essv5616664,essv5618107,essv5623261,essv5633920,essv5638447,essv5644417,essv5648964,essv5649812,essv5652419,essv5655953,essv5656577,essv5657226,essv5660197,essv5663198,essv5674877,essv5702989,essv5703075,essv5706433,essv5711626,essv5713207,essv5721341,essv5726618,essv5732879,essv5733303,essv5738934,essv5740683,essv5742494,essv5746061,essv5746960,essv5748924,essv5750987,essv5751448,essv5752385,essv5757575,essv5783493,essv5790385,essv5793601,essv5795930,essv5796220,essv5803129,essv5804443,essv5812347,essv5817051,essv5817920,essv5825826,essv5828027,essv5830102,essv5832123,essv5834192,essv5834705,essv5836591,essv5841447,essv5843050,essv5845678,essv5850739,essv5859573,essv5863471,essv5864128,essv5867308,essv5874172,essv5883227,essv5883717,essv5885018,essv5885998,essv5887466,essv5887860,essv5888259,essv5898963,essv5901085,essv5903725,essv5904698,essv5905120,essv5909372,essv5910221,essv5910672,essv5914728,essv5919286,essv5922588,essv5933284,essv5936962,essv5938008,essv5938197,essv5941008,essv5941170,essv5944582,essv5945444,essv5948251,essv5950163,essv5971444,essv5973359,essv5973645,essv5974899,essv5977635,essv5978628,essv5985350,essv5991660,essv5995640,essv5999100,essv6001217,essv6001694,essv6013025,essv6014100,essv6021886,essv6025649,essv6026203,essv6045437,essv6051065,essv6056766,essv6063198,essv6064219,essv6067469,essv6074043,essv6083679,essv6100913,essv6101186,essv6101258,essv6101279,essv6104290,essv6114438,essv6118569,essv6123419,essv6128686,essv6143825,essv6144046,essv6146097,essv6149675,essv6151804,essv6158659,essv6163227,essv6173656,essv6174159,essv6177899,essv6181789,essv6188254,essv6194663,essv6199767,essv6204433,essv6205811,essv6207338,essv6208875,essv6215106,essv6217750,essv6220496,essv6220846,essv6223357,essv6224800,essv6226006,essv6226909,essv6228976,essv6231889,essv6234077,essv6237721,essv6241074,essv6243422,essv6244536,essv6252430,essv6256029,essv6258016,essv6260022,essv6262209,essv6262943,essv6265257,essv6275996,essv6276421,essv6278188,essv6278709,essv6280172,essv6286183,essv6295641,essv6300674,essv6315900,essv6320340,essv6320910,essv6325266,essv6327643,essv6335967,essv6336469,essv6339144,essv6341849,essv6349629,essv6350182,essv6351628,essv6352121,essv6354596,essv6359108,essv6360631,essv6363574,essv6364636,essv6368218,essv6368260,essv6375782,essv6377477,essv6381288,essv6386945,essv6390017,essv6392240,essv6396639,essv6396964,essv6400391,essv6406899,essv6409217,essv6414527,essv6414667,essv6414705,essv6420303,essv6424641,essv6426568,essv6428860,essv6434770,essv6437150,essv6437407,essv6438293,essv6439682,essv6445344,essv6446815,essv6447551,essv6448880,essv6456001,essv6457377,essv6458867,essv6460089,essv6460871,essv6463915,essv6471445,essv6474836,essv6480469,essv6488935,essv6493220,essv6498297,essv6502810,essv6513521,essv6522474,essv6524753,essv6529541,essv6531799,essv6532865,essv6537251,essv6538355,essv6538666,essv6538862,essv6539319,essv6542299,essv6553185,essv6553343,essv6557644,essv6560586,essv6561033,essv6564758,essv6567171,essv6578498,essv6580334,essv6582863,essv6583114,essv6591878;num_studies=4;studies=1000GenomesPhase1,Ahn2009,Boomsma2014,1000GenomesPhase3;num_platforms=4;platforms=Illumina_GA,Multiple_NGS_Sequencing,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=4;algorithms=PEM,PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=939;samples=NA19676,NA18632,NA18987,HG01997,NA18964,HG01992,HG01991,NA20822,HG02502,HG03718,HG03838,HG03686,HG00275,NA20767,HG03832,HG01393,HG00373,HG03689,HG04047,NA19776,HG00427,HG00421,HG00422,NA20892,HG00543,HG00542,HG00428,NA12144,NA18553,NA18552,NA18555,NA18559,NA18558,NA19057,NA19065,NA19773,HG02238,HG01456,HG02470,HG04001,HG04164,HG01459,HG02479,HG04162,HG02277,HG01519,HG02274,HG01260,HG02271,HG02379,NA18536,HG03999,HG02375,HG02373,HG02278,HG01066,HG03593,HG01064,HG01063,NA18611,NA19072,HG03598,HG01305,HG01302,NA19078,HG01069,HG03773,NA20847,HG02512,HG02513,HG03793,NA19785,HG03019,NA19083,HG03012,NA19649,HG03778,HG01028,HG04222,NA11918,HG02017,HG02016,HG02152,HG02153,HG02150,HG02151,HG02156,HG03931,HG02154,HG02155,HG01603,NA18954,NA18957,HG01600,NA18951,HG02603,HG01605,HG03681,NA18959,HG01167,NA18747,HG03706,NA18602,HG01768,HG03703,NA19759,HG03708,HG01761,NA21097,HG04189,HG03557,NA19086,HG00234,HG00236,HG03785,HG02122,HG02121,HG02088,HG00589,HG02081,HG02082,HG00584,HG00583,HG02085,HG01111,HG01110,HG00740,NA19085,NA19788,HG00463,HG00464,NA19747,HG01497,HG01494,HG01495,HG01492,NA20899,NA19741,HG01491,HG03890,HG03895,NA19011,HG01948,HG02057,HG03800,HG01941,HG01942,HG01944,HG01945,HG01947,HG03803,HG03802,HG01341,NA18619,HG03805,HG00306,HG02232,HG01348,HG03808,NA18609,NA18608,HG01029,HG01187,HG02783,HG03969,HG01182,NA19735,HG03965,NA18603,HG03967,HG03960,NA19082,NA20585,HG03625,NA18550,NA20589,HG03624,HG00577,HG00128,HG04131,NA21111,HG00120,HG00672,HG02102,HG02429,HG01462,HG02425,HG04033,HG02420,HG01464,HG02032,NA20127,NA11843,NA21119,HG01139,NA18981,NA21110,NA21114,NA18999,HG02522,HG02521,HG02649,NA18991,NA18990,NA18993,NA18992,NA18994,NA18997,NA07048,HG02079,NA20796,NA19728,HG00631,HG00632,HG00635,HG00634,NA19746,HG00476,HG03858,HG00881,NA18967,NA07346,HG02166,HG02165,HG02164,HG02283,HG02286,HG00864,HG01848,HG02734,HG02048,HG01841,HG01840,HG01843,HG02047,HG01845,HG01844,HG01847,HG01795,HG01794,HG00707,HG01796,HG00701,HG00512,HG02050,NA19682,HG02075,NA19681,HG01799,HG00708,NA19684,NA19088,NA19443,NA19664,NA19794,HG01597,NA19663,HG01599,HG01598,HG01980,HG02275,HG01982,NA18525,NA18998,HG00346,HG02272,HG03692,NA18942,HG03690,HG03696,NA18648,HG00269,HG00266,HG00267,HG00264,NA18646,HG00262,NA18940,NA18643,NA18642,HG00410,NA18941,HG00419,HG00551,NA20911,HG00556,HG00557,NA06994,NA19012,HG03096,NA18549,NA18546,NA18547,NA18545,NA12760,NA18543,NA18541,NA19762,HG01935,HG04076,HG01939,HG01938,HG02371,HG01528,NA19764,HG01272,HG02265,HG02266,HG01277,HG02262,HG01275,HG02301,NA19077,HG02304,NA19063,NA19060,HG01378,HG01070,NA19067,NA19064,HG03589,NA21102,HG01377,HG01079,NA19070,HG00335,HG03874,NA20872,HG03789,HG03784,HG00674,HG00671,HG00179,NA20783,HG01435,HG01437,NA20786,HG01432,HG02410,NA19079,HG01205,HG01204,HG01200,NA20278,HG02002,HG02003,HG01809,HG01808,NA19719,HG02008,HG01804,HG01807,HG01806,HG01801,HG01802,HG04161,NA18943,HG01612,HG01613,NA18946,NA18947,NA18944,NA18949,NA19654,HG03733,NA20832,HG00445,HG03738,HG01757,HG04194,HG02086,HG00182,NA18639,HG01191,NA19722,NA19732,HG01892,HG01893,HG00956,HG02139,NA18635,HG02136,HG00384,HG02133,NA20897,HG00457,NA18934,HG00451,HG00599,HG00452,HG01104,HG00595,HG00596,HG00590,HG00458,HG00592,NA19081,HG00693,HG00692,HG00759,NA12155,HG00699,HG00698,HG01974,HG01977,HG03743,HG01971,HG01970,HG01973,sample_essv9765394,NA11894,HG01979,NA19056,NA19055,HG03745,HG03796,HG03949,HG02181,HG02180,HG03812,HG02182,HG00253,HG02184,HG00318,HG00250,NA18595,HG02188,NA18597,HG00315,NA18591,HG00313,NA18618,HG00258,NA21130,HG00525,NA18757,HG01031,HG02105,HG03955,NA18630,NA18577,NA18576,NA18573,NA18571,NA18579,NA19780,HG02087,HG02348,HG04144,HG02104,HG00130,HG00136,NA18612,HG01571,HG02355,HG02356,HG01572,HG02351,HG00111,HG01578,HG04026,HG02450,HG04020,NA19091,HG01247,NA19789,NA20507,NA18986,HG03851,NA18984,NA18985,NA18982,NA18983,NA12829,NA12828,HG03911,NA18989,HG00626,NA07056,HG00625,HG00622,HG00623,HG00620,NA20299,HG03634,HG01710,HG00628,HG00629,NA12383,HG02690,NA19770,HG00143,HG00141,NA18976,NA20890,HG04090,NA18596,HG04094,HG04099,HG01857,HG01855,HG01852,HG01853,HG01850,HG01851,HG02178,HG02179,HG02696,NA20895,HG01858,HG00851,HG02078,HG03619,NA18874,HG01148,HG02070,HG02073,HG02072,HG01122,NA20314,HG02076,HG01849,NA18978,HG01786,HG00717,NA20904,NA18973,NA18972,NA18971,NA18970,NA18977,HG04152,NA18975,NA18974,HG00982,NA21105,NA18613,HG02383,HG02382,NA18950,HG02380,NA19655,HG02386,HG02385,HG02384,NA19658,HG02389,NA19006,NA06985,HG00353,NA18538,NA20582,HG03604,HG00358,HG03607,NA21089,NA21088,HG04206,HG00566,HG04200,HG00560,HG04202,HG02040,NA19679,HG03916,HG03663,HG04209,HG03913,HG03600,HG00766,HG00409,HG02699,HG00407,HG00404,HG00403,NA19004,NA19005,NA18539,NA18530,NA19000,NA19001,NA19002,HG00704,NA18533,NA18531,HG00690,NA18537,HG01797,NA18534,HG04061,HG04062,HG01536,HG00501,HG01926,HG01927,HG01924,HG02494,HG01923,HG01920,HG01921,HG02250,HG02252,NA12005,NA20510,NA19076,HG02259,HG02312,HG00328,HG01369,HG04063,HG01047,HG03985,NA18627,HG01048,HG01362,HG03862,NA18623,HG03864,NA18621,HG03866,NA20869,NA20318,NA18953,NA19755,NA19749,NA20317,NA20866,NA20867,NA20864,HG01798,NA19058,NA20518,NA12341,HG00662,NA19750,HG02406,HG01402,HG01405,HG02401,HG02402,NA20798,HG02409,NA19066,HG02491,HG02490,HG01812,HG01813,HG01810,HG01811,HG02031,HG01817,HG01815,HG02661,NA20819,NA20818,HG03998,NA19054,NA20812,NA18647,HG00619,HG03729,HG00614,HG00613,HG00611,HG00610,HG00190,NA21141,HG03943,NA20887,NA12718,HG01869,HG01868,HG01867,HG01866,HG01865,HG01864,HG01863,HG01862,HG01861,HG01860,HG00442,HG00443,NA20807,HG00446,NA20881,HG00338,HG00448,HG01136,HG00684,HG00729,HG00728,HG00683,HG00689,HG03826,NA18616,HG01961,HG01967,NA18617,HG01968,NA18628,NA18614,HG02215,HG03437,NA18615,NA12043,NA18626,HG03814,NA18625,HG03815,HG03762,HG00246,HG03989,HG02187,HG03940,NA18582,HG00362,HG02186,HG00366,HG02190,HG00364,HG00437,HG00436,NA18748,NA18749,HG00536,HG00537,HG00534,NA18620,NA18740,HG00533,HG00530,HG00531,NA18566,HG02223,NA18560,HG01917,HG01444,HG01447,HG04153,HG01440,HG04156,HG04158,NA18592,HG01918,HG02360,HG02364,HG02367,HG04017,HG01311,HG01259,HG03844,HG03645,HG01250,HG01251,HG01253,HG01254,HG01257,NA20852,NA19084,NA20854,HG00879,NA19731,NA12830,NA20770,NA19087,HG00653,HG00651,HG00650,HG03767,HG01702,HG01700,HG01705,HG03009,HG00158,HG00154,HG03695,HG03007,HG00151,HG00152,HG03928,NA18644,HG03698,HG02064,HG00290,NA19652,HG02060,HG02061,NA18641,HG02147,HG02146,HG02141,HG02069,HG03646,NA12889,HG01174,HG00844,HG01176,HG01171,HG02298,NA18968,HG03716,NA19734,HG03711,HG00559,NA18960,NA18961,NA18962,NA18963,HG01773,NA18965,NA18966,HG01770,NA12283,NA12286,HG02390,HG02391,HG02392,HG02395,HG02396,HG02397,HG02398,HG02399,NA20792,HG02407,HG00418,NA12749,NA21098,NA19657,NA20795,HG04235,NA19080,HG00578,HG00479,HG00478,HG03640,HG00473,HG00472,HG02685,HG02682,HG01686,HG00475,NA19900,NA18528,HG04225,HG02084,HG03886,NA18526,HG03644,HG01489,HG01488,HG00581,HG01953,HG03235,HG01951,HG01950,HG01354,HG01357,HG01356,HG01351,HG03873,NA19010,HG01359,HG01080,NA18638,HG01083,HG01058,HG00500,HG03977,HG03976,HG01054,HG01055,HG03973,NA18631,HG03629,NA18633,NA12413,NA18548,NA18634,SJK,HG00115,HG00116,HG00118,HG02142,NA20412,HG04029,HG01556,NA20870,HG01550,HG02353,HG01413,HG03490,NA20529,NA20908,HG02029,NA21128,HG03899,HG02023,NA18636,HG02026,HG02025,NA20809,NA20804,HG02654,NA18599,NA20800,HG01177,NA18910,HG00608,NA12249,HG03757,HG03755,HG02035,NA19009,NA12874,HG02790,HG02116,HG02299,HG02113,NA18969,NA21133,HG02291,HG02292,HG03631,HG01124,HG01125,HG01878,HG01879,HG00978,HG02058,HG01874,HG01086,HG01870,HG01871,HG01872,HG01873,HG02728,NA12273,NA19758,HG02727;num_samples_tested=4327;frequency=21.7%;num_unique_samples_tested=3330;nr_frequency=28.19%;PopulationSummary=European 119:Asian 573:Mexican 38:African 23:Admixed 0:MiddleEast 0:NativeAmerican 33:NorthAmerican 15:SouthAmerican 138:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1143161	1143161	.	.	.	ID=gssv322;Name=gssv322;variant_type=CNV;variant_sub_type=Loss;outer_start=1142700;inner_start=1142715;inner_end=1143140;outer_end=1143161;inner_rank=8;num_variants=1235;variants=essv9765394,essv31773,essv9839622,essv9839623,essv9839624,essv9839625,essv9839626,essv9839627,essv9839628,essv9839629,essv9839630,essv9839631,essv9839632,essv9839633,essv9839634,essv9839635,essv9839636,essv9839637,essv9839638,essv9839639,essv9839640,essv9839641,essv9839642,essv9839643,essv9839644,essv9839645,essv9839646,essv9839647,essv9839648,essv9839649,essv9839650,essv9839651,essv9839652,essv9839653,essv9839654,essv9839655,essv9839656,essv9839657,essv9839658,essv9839659,essv9839660,essv9839661,essv9839662,essv9839663,essv9839664,essv9839665,essv9839666,essv9839667,essv9839668,essv9839669,essv9839670,essv9839671,essv9839672,essv9839673,essv9839674,essv9839675,essv9839676,essv9839677,essv9839678,essv9839679,essv9839680,essv9839681,essv9839682,essv9839683,essv9839684,essv9839685,essv9839686,essv9839687,essv9839688,essv9839689,essv9839690,essv9839691,essv9839692,essv9839693,essv9839694,essv9839695,essv9839696,essv9839697,essv9839698,essv9839699,essv9839700,essv9839701,essv9839702,essv9839703,essv9839704,essv9839705,essv9839706,essv9839707,essv9839708,essv9839709,essv9839710,essv9839711,essv9839712,essv9839713,essv9839714,essv9839715,essv9839716,essv9839717,essv9839718,essv9839719,essv9839720,essv9839721,essv9839722,essv9839723,essv9839724,essv9839725,essv9839726,essv9839727,essv9839728,essv9839729,essv9839730,essv9839731,essv9839732,essv9839733,essv9839734,essv9839735,essv9839736,essv9839737,essv9839738,essv9839739,essv9839740,essv9839741,essv9839742,essv9839743,essv9839744,essv9839745,essv9839746,essv9839747,essv9839748,essv9839749,essv9839750,essv9839751,essv9839752,essv9839753,essv9839754,essv9839755,essv9839756,essv9839757,essv9839758,essv9839759,essv9839760,essv9839761,essv9839762,essv9839763,essv9839764,essv9839765,essv9839766,essv9839767,essv9839768,essv9839769,essv9839770,essv9839771,essv9839772,essv9839773,essv9839774,essv9839775,essv9839776,essv9839777,essv9839778,essv9839779,essv9839780,essv9839781,essv9839782,essv9839783,essv9839784,essv9839785,essv9839786,essv9839787,essv9839788,essv9839789,essv9839790,essv9839791,essv9839792,essv9839793,essv9839794,essv9839795,essv9839796,essv9839797,essv9839798,essv9839799,essv9839800,essv9839801,essv9839802,essv9839803,essv9839804,essv9839805,essv9839806,essv9839807,essv9839808,essv9839809,essv9839810,essv9839811,essv9839812,essv9839813,essv9839814,essv9839815,essv9839816,essv9839817,essv9839818,essv9839819,essv9839820,essv9839821,essv9839822,essv9839823,essv9839824,essv9839825,essv9839826,essv9839827,essv9839828,essv9839829,essv9839830,essv9839831,essv9839832,essv9839833,essv9839834,essv9839835,essv9839836,essv9839837,essv9839838,essv9839839,essv9839840,essv9839841,essv9839842,essv9839843,essv9839844,essv9839845,essv9839846,essv9839847,essv9839848,essv9839849,essv9839850,essv9839851,essv9839852,essv9839853,essv9839854,essv9839855,essv9839856,essv9839857,essv9839858,essv9839859,essv9839860,essv9839861,essv9839862,essv9839863,essv9839864,essv9839865,essv9839866,essv9839867,essv9839868,essv9839869,essv9839870,essv9839871,essv9839872,essv9839873,essv9839874,essv9839875,essv9839876,essv9839877,essv9839878,essv9839879,essv9839880,essv9839881,essv9839882,essv9839883,essv9839884,essv9839885,essv9839886,essv9839887,essv9839888,essv9839889,essv9839890,essv9839891,essv9839892,essv9839893,essv9839894,essv9839895,essv9839896,essv9839897,essv9839898,essv9839899,essv9839900,essv9839901,essv9839902,essv9839903,essv9839904,essv9839905,essv9839906,essv9839907,essv9839908,essv9839909,essv9839910,essv9839911,essv9839912,essv9839913,essv9839914,essv9839915,essv9839916,essv9839917,essv9839918,essv9839919,essv9839920,essv9839921,essv9839922,essv9839923,essv9839924,essv9839925,essv9839926,essv9839927,essv9839928,essv9839929,essv9839930,essv9839931,essv9839932,essv9839933,essv9839934,essv9839935,essv9839936,essv9839937,essv9839938,essv9839939,essv9839940,essv9839941,essv9839942,essv9839943,essv9839944,essv9839945,essv9839946,essv9839947,essv9839948,essv9839949,essv9839950,essv9839951,essv9839952,essv9839953,essv9839954,essv9839955,essv9839956,essv9839957,essv9839958,essv9839959,essv9839960,essv9839961,essv9839962,essv9839963,essv9839964,essv9839965,essv9839966,essv9839967,essv9839968,essv9839969,essv9839970,essv9839971,essv9839972,essv9839973,essv9839974,essv9839975,essv9839976,essv9839977,essv9839978,essv9839979,essv9839980,essv9839981,essv9839982,essv9839983,essv9839984,essv9839985,essv9839986,essv9839987,essv9839988,essv9839989,essv9839990,essv9839991,essv9839992,essv9839993,essv9839994,essv9839995,essv9839996,essv9839997,essv9839998,essv9839999,essv9840000,essv9840001,essv9840002,essv9840003,essv9840004,essv9840005,essv9840006,essv9840007,essv9840008,essv9840009,essv9840010,essv9840011,essv9840012,essv9840013,essv9840014,essv9840015,essv9840016,essv9840017,essv9840018,essv9840019,essv9840020,essv9840021,essv9840022,essv9840023,essv9840024,essv9840025,essv9840026,essv9840027,essv9840028,essv9840029,essv9840030,essv9840031,essv9840032,essv9840033,essv9840034,essv9840035,essv9840036,essv9840037,essv9840038,essv9840039,essv9840040,essv9840041,essv9840042,essv9840043,essv9840044,essv9840045,essv9840046,essv9840047,essv9840048,essv9840049,essv9840050,essv9840051,essv9840052,essv9840053,essv9840054,essv9840055,essv9840056,essv9840057,essv9840058,essv9840059,essv9840060,essv9840061,essv9840062,essv9840063,essv9840064,essv9840065,essv9840066,essv9840067,essv9840068,essv9840069,essv9840070,essv9840071,essv9840072,essv9840073,essv9840074,essv9840075,essv9840076,essv9840077,essv9840078,essv9840079,essv9840080,essv9840081,essv9840082,essv9840083,essv9840084,essv9840085,essv9840086,essv9840087,essv9840088,essv9840089,essv9840090,essv9840091,essv9840092,essv9840093,essv9840094,essv9840095,essv9840096,essv9840097,essv9840098,essv9840099,essv9840100,essv9840101,essv9840102,essv9840103,essv9840104,essv9840105,essv9840106,essv9840107,essv9840108,essv9840109,essv9840110,essv9840111,essv9840112,essv9840113,essv9840114,essv9840115,essv9840116,essv9840117,essv9840118,essv9840119,essv9840120,essv9840121,essv9840122,essv9840123,essv9840124,essv9840125,essv9840126,essv9840127,essv9840128,essv9840129,essv9840130,essv9840131,essv9840132,essv9840133,essv9840134,essv9840135,essv9840136,essv9840137,essv9840138,essv9840139,essv9840140,essv9840141,essv9840142,essv9840143,essv9840144,essv9840145,essv9840146,essv9840147,essv9840148,essv9840149,essv9840150,essv9840151,essv9840152,essv9840153,essv9840154,essv9840155,essv9840156,essv9840157,essv9840158,essv9840159,essv9840160,essv9840161,essv9840162,essv9840163,essv9840164,essv9840165,essv9840166,essv9840167,essv9840168,essv9840169,essv9840170,essv9840171,essv9840172,essv9840173,essv9840174,essv9840175,essv9840176,essv9840177,essv9840178,essv9840179,essv9840180,essv9840181,essv9840182,essv9840183,essv9840184,essv9840185,essv9840186,essv9840187,essv9840188,essv9840189,essv9840190,essv9840191,essv9840192,essv9840193,essv9840194,essv9840195,essv9840196,essv9840197,essv9840198,essv9840199,essv9840200,essv9840201,essv9840202,essv9840203,essv9840204,essv9840205,essv9840206,essv9840207,essv9840208,essv9840209,essv9840210,essv9840211,essv9840212,essv9840213,essv9840214,essv9840215,essv9840216,essv9840217,essv9840218,essv9840219,essv9840220,essv9840221,essv9840222,essv9840223,essv9840224,essv9840225,essv9840226,essv9840227,essv9840228,essv9840229,essv9840230,essv9840231,essv9840232,essv9840233,essv9840234,essv9840235,essv9840236,essv9840237,essv9840238,essv9840239,essv9840240,essv9840241,essv9840242,essv9840243,essv9840244,essv9840245,essv9840246,essv9840247,essv9840248,essv9840249,essv9840250,essv9840251,essv9840252,essv9840253,essv9840254,essv9840255,essv9840256,essv9840257,essv9840258,essv9840259,essv9840260,essv9840261,essv9840262,essv9840263,essv9840264,essv9840265,essv9840266,essv9840267,essv9840268,essv9840269,essv9840270,essv9840271,essv9840272,essv9840273,essv9840274,essv9840275,essv9840276,essv9840277,essv9840278,essv9840279,essv9840280,essv9840281,essv9840282,essv9840283,essv9840284,essv9840285,essv9840286,essv9840287,essv9840288,essv9840289,essv9840290,essv9840291,essv9840292,essv9840293,essv9840294,essv9840295,essv9840296,essv9840297,essv9840298,essv9840299,essv9840300,essv9840301,essv9840302,essv9840303,essv9840304,essv9840305,essv9840306,essv9840307,essv9840308,essv9840309,essv9840310,essv9840311,essv9840312,essv9840313,essv9840314,essv9840315,essv9840316,essv9840317,essv9840318,essv9840319,essv9840320,essv9840321,essv9840322,essv9840323,essv9840324,essv9840325,essv9840326,essv9840327,essv9840328,essv9840329,essv9840330,essv9840331,essv9840332,essv9840333,essv9840334,essv9840335,essv9840336,essv9840337,essv9840338,essv9840339,essv9840340,essv9840341,essv9840342,essv9840343,essv9840344,essv9840345,essv9840346,essv9840347,essv9840348,essv9840349,essv9840350,essv9840351,essv9840352,essv9840353,essv9840354,essv9840355,essv9840356,essv9840357,essv9840358,essv9840359,essv9840360,essv9840361,essv9840362,essv9840363,essv9840364,essv9840365,essv9840366,essv9840367,essv9840368,essv9840369,essv9840370,essv9840371,essv9840372,essv9840373,essv9840374,essv9840375,essv9840376,essv9840377,essv9840378,essv9840379,essv9840380,essv9840381,essv9840382,essv9840383,essv9840384,essv9840385,essv9840386,essv9840387,essv9840388,essv9840389,essv9840390,essv9840391,essv9840392,essv9840393,essv9840394,essv9840395,essv9840396,essv9840397,essv9840398,essv9840399,essv9840400,essv9840401,essv9840402,essv9840403,essv9840404,essv9840405,essv9840406,essv9840407,essv9840408,essv9840409,essv9840410,essv9840411,essv9840412,essv9840413,essv9840414,essv9840415,essv9840416,essv9840417,essv9840418,essv9840419,essv9840420,essv9840421,essv9840422,essv9840423,essv9840424,essv9840425,essv9840426,essv9840427,essv9840428,essv9840429,essv9840430,essv9840431,essv9840432,essv9840433,essv9840434,essv9840435,essv9840436,essv9840437,essv9840438,essv9840439,essv9840440,essv9840441,essv9840442,essv9840443,essv9840444,essv9840445,essv9840446,essv9840447,essv9840448,essv9840449,essv9840450,essv9840451,essv9840452,essv9840453,essv9840454,essv9840455,essv9840456,essv9840457,essv9840458,essv9840459,essv9840460,essv9840461,essv9840462,essv9840463,essv9840464,essv9840465,essv9840466,essv9840467,essv9840468,essv9840469,essv9840470,essv9840471,essv9840472,essv9840473,essv9840474,essv9840475,essv9840476,essv9840477,essv9840478,essv9840479,essv9840480,essv9840481,essv9840482,essv9840483,essv9840484,essv9840485,essv9840486,essv9840487,essv9840488,essv9840489,essv9840490,essv9840491,essv9840492,essv9840493,essv9840494,essv9840495,essv9840496,essv9840497,essv9840498,essv9840499,essv9840500,essv9840501,essv9840502,essv9840503,essv9840504,essv9840505,essv9840506,essv9840507,essv9840508,essv9840509,essv9840510,essv9840511,essv9840512,essv9840513,essv9840514,essv9840515,essv9840516,essv9840517,essv9840518,essv9840519,essv9840520,essv9840521,essv9840522,essv9840523,essv9840524,essv9840525,essv9840526,essv9840527,essv9840528,essv9840529,essv9840530,essv9840531,essv9840532,essv9840533,essv9840534,essv9840535,essv9840536,essv9840537,essv9840538,essv9840539,essv9840540,essv5398394,essv5407641,essv5410354,essv5411481,essv5420730,essv5424544,essv5426116,essv5429106,essv5431171,essv5434081,essv5456664,essv5459892,essv5465256,essv5467001,essv5467091,essv5468369,essv5469789,essv5470790,essv5471121,essv5471360,essv5471503,essv5479749,essv5479850,essv5488749,essv5490777,essv5491686,essv5492773,essv5496017,essv5496511,essv5498166,essv5499361,essv5503996,essv5509795,essv5513375,essv5514109,essv5515576,essv5517206,essv5517797,essv5518716,essv5525837,essv5535991,essv5545854,essv5548255,essv5559069,essv5559627,essv5565444,essv5568792,essv5577522,essv5577785,essv5578554,essv5578606,essv5583578,essv5594683,essv5596504,essv5602057,essv5607310,essv5615034,essv5615341,essv5615345,essv5616249,essv5616664,essv5618107,essv5623261,essv5633920,essv5638447,essv5644417,essv5648964,essv5649812,essv5652419,essv5655953,essv5656577,essv5657226,essv5660197,essv5663198,essv5674877,essv5702989,essv5703075,essv5706433,essv5711626,essv5713207,essv5721341,essv5726618,essv5732879,essv5733303,essv5738934,essv5740683,essv5742494,essv5746061,essv5746960,essv5748924,essv5750987,essv5751448,essv5752385,essv5757575,essv5783493,essv5790385,essv5793601,essv5795930,essv5796220,essv5803129,essv5804443,essv5812347,essv5817051,essv5817920,essv5825826,essv5828027,essv5830102,essv5832123,essv5834192,essv5834705,essv5836591,essv5841447,essv5843050,essv5845678,essv5850739,essv5859573,essv5863471,essv5864128,essv5867308,essv5874172,essv5883227,essv5883717,essv5885018,essv5885998,essv5887466,essv5887860,essv5888259,essv5898963,essv5901085,essv5903725,essv5904698,essv5905120,essv5909372,essv5910221,essv5910672,essv5914728,essv5919286,essv5922588,essv5933284,essv5936962,essv5938008,essv5938197,essv5941008,essv5941170,essv5944582,essv5945444,essv5948251,essv5950163,essv5971444,essv5973359,essv5973645,essv5974899,essv5977635,essv5978628,essv5985350,essv5991660,essv5995640,essv5999100,essv6001217,essv6001694,essv6013025,essv6014100,essv6021886,essv6025649,essv6026203,essv6045437,essv6051065,essv6056766,essv6063198,essv6064219,essv6067469,essv6074043,essv6083679,essv6100913,essv6101186,essv6101258,essv6101279,essv6104290,essv6114438,essv6118569,essv6123419,essv6128686,essv6143825,essv6144046,essv6146097,essv6149675,essv6151804,essv6158659,essv6163227,essv6173656,essv6174159,essv6177899,essv6181789,essv6188254,essv6194663,essv6199767,essv6204433,essv6205811,essv6207338,essv6208875,essv6215106,essv6217750,essv6220496,essv6220846,essv6223357,essv6224800,essv6226006,essv6226909,essv6228976,essv6231889,essv6234077,essv6237721,essv6241074,essv6243422,essv6244536,essv6252430,essv6256029,essv6258016,essv6260022,essv6262209,essv6262943,essv6265257,essv6275996,essv6276421,essv6278188,essv6278709,essv6280172,essv6286183,essv6295641,essv6300674,essv6315900,essv6320340,essv6320910,essv6325266,essv6327643,essv6335967,essv6336469,essv6339144,essv6341849,essv6349629,essv6350182,essv6351628,essv6352121,essv6354596,essv6359108,essv6360631,essv6363574,essv6364636,essv6368218,essv6368260,essv6375782,essv6377477,essv6381288,essv6386945,essv6390017,essv6392240,essv6396639,essv6396964,essv6400391,essv6406899,essv6409217,essv6414527,essv6414667,essv6414705,essv6420303,essv6424641,essv6426568,essv6428860,essv6434770,essv6437150,essv6437407,essv6438293,essv6439682,essv6445344,essv6446815,essv6447551,essv6448880,essv6456001,essv6457377,essv6458867,essv6460089,essv6460871,essv6463915,essv6471445,essv6474836,essv6480469,essv6488935,essv6493220,essv6498297,essv6502810,essv6513521,essv6522474,essv6524753,essv6529541,essv6531799,essv6532865,essv6537251,essv6538355,essv6538666,essv6538862,essv6539319,essv6542299,essv6553185,essv6553343,essv6557644,essv6560586,essv6561033,essv6564758,essv6567171,essv6578498,essv6580334,essv6582863,essv6583114,essv6591878;num_studies=4;studies=1000GenomesPhase1,Ahn2009,Boomsma2014,1000GenomesPhase3;num_platforms=4;platforms=Illumina_GA,Multiple_NGS_Sequencing,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=4;algorithms=PEM,PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=939;samples=NA19676,NA18632,NA18987,HG01997,NA18964,HG01992,HG01991,NA20822,HG02502,HG03718,HG03838,HG03686,HG00275,NA20767,HG03832,HG01393,HG00373,HG03689,HG04047,NA19776,HG00427,HG00421,HG00422,NA20892,HG00543,HG00542,HG00428,NA12144,NA18553,NA18552,NA18555,NA18559,NA18558,NA19057,NA19065,NA19773,HG02238,HG01456,HG02470,HG04001,HG04164,HG01459,HG02479,HG04162,HG02277,HG01519,HG02274,HG01260,HG02271,HG02379,NA18536,HG03999,HG02375,HG02373,HG02278,HG01066,HG03593,HG01064,HG01063,NA18611,NA19072,HG03598,HG01305,HG01302,NA19078,HG01069,HG03773,NA20847,HG02512,HG02513,HG03793,NA19785,HG03019,NA19083,HG03012,NA19649,HG03778,HG01028,HG04222,NA11918,HG02017,HG02016,HG02152,HG02153,HG02150,HG02151,HG02156,HG03931,HG02154,HG02155,HG01603,NA18954,NA18957,HG01600,NA18951,HG02603,HG01605,HG03681,NA18959,HG01167,NA18747,HG03706,NA18602,HG01768,HG03703,NA19759,HG03708,HG01761,NA21097,HG04189,HG03557,NA19086,HG00234,HG00236,HG03785,HG02122,HG02121,HG02088,HG00589,HG02081,HG02082,HG00584,HG00583,HG02085,HG01111,HG01110,HG00740,NA19085,NA19788,HG00463,HG00464,NA19747,HG01497,HG01494,HG01495,HG01492,NA20899,NA19741,HG01491,HG03890,HG03895,NA19011,HG01948,HG02057,HG03800,HG01941,HG01942,HG01944,HG01945,HG01947,HG03803,HG03802,HG01341,NA18619,HG03805,HG00306,HG02232,HG01348,HG03808,NA18609,NA18608,HG01029,HG01187,HG02783,HG03969,HG01182,NA19735,HG03965,NA18603,HG03967,HG03960,NA19082,NA20585,HG03625,NA18550,NA20589,HG03624,HG00577,HG00128,HG04131,NA21111,HG00120,HG00672,HG02102,HG02429,HG01462,HG02425,HG04033,HG02420,HG01464,HG02032,NA20127,NA11843,NA21119,HG01139,NA18981,NA21110,NA21114,NA18999,HG02522,HG02521,HG02649,NA18991,NA18990,NA18993,NA18992,NA18994,NA18997,NA07048,HG02079,NA20796,NA19728,HG00631,HG00632,HG00635,HG00634,NA19746,HG00476,HG03858,HG00881,NA18967,NA07346,HG02166,HG02165,HG02164,HG02283,HG02286,HG00864,HG01848,HG02734,HG02048,HG01841,HG01840,HG01843,HG02047,HG01845,HG01844,HG01847,HG01795,HG01794,HG00707,HG01796,HG00701,HG00512,HG02050,NA19682,HG02075,NA19681,HG01799,HG00708,NA19684,NA19088,NA19443,NA19664,NA19794,HG01597,NA19663,HG01599,HG01598,HG01980,HG02275,HG01982,NA18525,NA18998,HG00346,HG02272,HG03692,NA18942,HG03690,HG03696,NA18648,HG00269,HG00266,HG00267,HG00264,NA18646,HG00262,NA18940,NA18643,NA18642,HG00410,NA18941,HG00419,HG00551,NA20911,HG00556,HG00557,NA06994,NA19012,HG03096,NA18549,NA18546,NA18547,NA18545,NA12760,NA18543,NA18541,NA19762,HG01935,HG04076,HG01939,HG01938,HG02371,HG01528,NA19764,HG01272,HG02265,HG02266,HG01277,HG02262,HG01275,HG02301,NA19077,HG02304,NA19063,NA19060,HG01378,HG01070,NA19067,NA19064,HG03589,NA21102,HG01377,HG01079,NA19070,HG00335,HG03874,NA20872,HG03789,HG03784,HG00674,HG00671,HG00179,NA20783,HG01435,HG01437,NA20786,HG01432,HG02410,NA19079,HG01205,HG01204,HG01200,NA20278,HG02002,HG02003,HG01809,HG01808,NA19719,HG02008,HG01804,HG01807,HG01806,HG01801,HG01802,HG04161,NA18943,HG01612,HG01613,NA18946,NA18947,NA18944,NA18949,NA19654,HG03733,NA20832,HG00445,HG03738,HG01757,HG04194,HG02086,HG00182,NA18639,HG01191,NA19722,NA19732,HG01892,HG01893,HG00956,HG02139,NA18635,HG02136,HG00384,HG02133,NA20897,HG00457,NA18934,HG00451,HG00599,HG00452,HG01104,HG00595,HG00596,HG00590,HG00458,HG00592,NA19081,HG00693,HG00692,HG00759,NA12155,HG00699,HG00698,HG01974,HG01977,HG03743,HG01971,HG01970,HG01973,sample_essv9765394,NA11894,HG01979,NA19056,NA19055,HG03745,HG03796,HG03949,HG02181,HG02180,HG03812,HG02182,HG00253,HG02184,HG00318,HG00250,NA18595,HG02188,NA18597,HG00315,NA18591,HG00313,NA18618,HG00258,NA21130,HG00525,NA18757,HG01031,HG02105,HG03955,NA18630,NA18577,NA18576,NA18573,NA18571,NA18579,NA19780,HG02087,HG02348,HG04144,HG02104,HG00130,HG00136,NA18612,HG01571,HG02355,HG02356,HG01572,HG02351,HG00111,HG01578,HG04026,HG02450,HG04020,NA19091,HG01247,NA19789,NA20507,NA18986,HG03851,NA18984,NA18985,NA18982,NA18983,NA12829,NA12828,HG03911,NA18989,HG00626,NA07056,HG00625,HG00622,HG00623,HG00620,NA20299,HG03634,HG01710,HG00628,HG00629,NA12383,HG02690,NA19770,HG00143,HG00141,NA18976,NA20890,HG04090,NA18596,HG04094,HG04099,HG01857,HG01855,HG01852,HG01853,HG01850,HG01851,HG02178,HG02179,HG02696,NA20895,HG01858,HG00851,HG02078,HG03619,NA18874,HG01148,HG02070,HG02073,HG02072,HG01122,NA20314,HG02076,HG01849,NA18978,HG01786,HG00717,NA20904,NA18973,NA18972,NA18971,NA18970,NA18977,HG04152,NA18975,NA18974,HG00982,NA21105,NA18613,HG02383,HG02382,NA18950,HG02380,NA19655,HG02386,HG02385,HG02384,NA19658,HG02389,NA19006,NA06985,HG00353,NA18538,NA20582,HG03604,HG00358,HG03607,NA21089,NA21088,HG04206,HG00566,HG04200,HG00560,HG04202,HG02040,NA19679,HG03916,HG03663,HG04209,HG03913,HG03600,HG00766,HG00409,HG02699,HG00407,HG00404,HG00403,NA19004,NA19005,NA18539,NA18530,NA19000,NA19001,NA19002,HG00704,NA18533,NA18531,HG00690,NA18537,HG01797,NA18534,HG04061,HG04062,HG01536,HG00501,HG01926,HG01927,HG01924,HG02494,HG01923,HG01920,HG01921,HG02250,HG02252,NA12005,NA20510,NA19076,HG02259,HG02312,HG00328,HG01369,HG04063,HG01047,HG03985,NA18627,HG01048,HG01362,HG03862,NA18623,HG03864,NA18621,HG03866,NA20869,NA20318,NA18953,NA19755,NA19749,NA20317,NA20866,NA20867,NA20864,HG01798,NA19058,NA20518,NA12341,HG00662,NA19750,HG02406,HG01402,HG01405,HG02401,HG02402,NA20798,HG02409,NA19066,HG02491,HG02490,HG01812,HG01813,HG01810,HG01811,HG02031,HG01817,HG01815,HG02661,NA20819,NA20818,HG03998,NA19054,NA20812,NA18647,HG00619,HG03729,HG00614,HG00613,HG00611,HG00610,HG00190,NA21141,HG03943,NA20887,NA12718,HG01869,HG01868,HG01867,HG01866,HG01865,HG01864,HG01863,HG01862,HG01861,HG01860,HG00442,HG00443,NA20807,HG00446,NA20881,HG00338,HG00448,HG01136,HG00684,HG00729,HG00728,HG00683,HG00689,HG03826,NA18616,HG01961,HG01967,NA18617,HG01968,NA18628,NA18614,HG02215,HG03437,NA18615,NA12043,NA18626,HG03814,NA18625,HG03815,HG03762,HG00246,HG03989,HG02187,HG03940,NA18582,HG00362,HG02186,HG00366,HG02190,HG00364,HG00437,HG00436,NA18748,NA18749,HG00536,HG00537,HG00534,NA18620,NA18740,HG00533,HG00530,HG00531,NA18566,HG02223,NA18560,HG01917,HG01444,HG01447,HG04153,HG01440,HG04156,HG04158,NA18592,HG01918,HG02360,HG02364,HG02367,HG04017,HG01311,HG01259,HG03844,HG03645,HG01250,HG01251,HG01253,HG01254,HG01257,NA20852,NA19084,NA20854,HG00879,NA19731,NA12830,NA20770,NA19087,HG00653,HG00651,HG00650,HG03767,HG01702,HG01700,HG01705,HG03009,HG00158,HG00154,HG03695,HG03007,HG00151,HG00152,HG03928,NA18644,HG03698,HG02064,HG00290,NA19652,HG02060,HG02061,NA18641,HG02147,HG02146,HG02141,HG02069,HG03646,NA12889,HG01174,HG00844,HG01176,HG01171,HG02298,NA18968,HG03716,NA19734,HG03711,HG00559,NA18960,NA18961,NA18962,NA18963,HG01773,NA18965,NA18966,HG01770,NA12283,NA12286,HG02390,HG02391,HG02392,HG02395,HG02396,HG02397,HG02398,HG02399,NA20792,HG02407,HG00418,NA12749,NA21098,NA19657,NA20795,HG04235,NA19080,HG00578,HG00479,HG00478,HG03640,HG00473,HG00472,HG02685,HG02682,HG01686,HG00475,NA19900,NA18528,HG04225,HG02084,HG03886,NA18526,HG03644,HG01489,HG01488,HG00581,HG01953,HG03235,HG01951,HG01950,HG01354,HG01357,HG01356,HG01351,HG03873,NA19010,HG01359,HG01080,NA18638,HG01083,HG01058,HG00500,HG03977,HG03976,HG01054,HG01055,HG03973,NA18631,HG03629,NA18633,NA12413,NA18548,NA18634,SJK,HG00115,HG00116,HG00118,HG02142,NA20412,HG04029,HG01556,NA20870,HG01550,HG02353,HG01413,HG03490,NA20529,NA20908,HG02029,NA21128,HG03899,HG02023,NA18636,HG02026,HG02025,NA20809,NA20804,HG02654,NA18599,NA20800,HG01177,NA18910,HG00608,NA12249,HG03757,HG03755,HG02035,NA19009,NA12874,HG02790,HG02116,HG02299,HG02113,NA18969,NA21133,HG02291,HG02292,HG03631,HG01124,HG01125,HG01878,HG01879,HG00978,HG02058,HG01874,HG01086,HG01870,HG01871,HG01872,HG01873,HG02728,NA12273,NA19758,HG02727;num_samples_tested=4327;frequency=21.7%;num_unique_samples_tested=3330;nr_frequency=28.19%;PopulationSummary=European 119:Asian 573:Mexican 38:African 23:Admixed 0:MiddleEast 0:NativeAmerican 33:NorthAmerican 15:SouthAmerican 138:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1465911	1465911	.	.	.	ID=gssv327;Name=gssv327;variant_type=CNV;variant_sub_type=Loss;outer_start=1465911;inner_start=1465911;inner_end=1466230;outer_end=1466268;inner_rank=8;num_variants=346;variants=essv9748423,essv5396313,essv5401002,essv5403407,essv5404027,essv5413690,essv5414131,essv5415672,essv5416971,essv5418392,essv5439542,essv5441861,essv5442733,essv5451411,essv5451520,essv5453253,essv5456023,essv5456443,essv5457645,essv5458146,essv5463872,essv5471316,essv5476828,essv5480416,essv5481540,essv5482099,essv5482830,essv5484338,essv5484376,essv5488378,essv5489541,essv5492724,essv5493577,essv5497478,essv5501254,essv5507419,essv5520380,essv5522114,essv5527150,essv5527698,essv5528890,essv5531638,essv5538350,essv5541808,essv5551173,essv5553146,essv5553769,essv5554792,essv5555363,essv5557211,essv5568689,essv5578213,essv5580450,essv5588497,essv5594774,essv5597132,essv5597594,essv5598870,essv5599977,essv5601026,essv5604347,essv5609173,essv5609533,essv5612794,essv5614655,essv5616806,essv5623987,essv5628085,essv5628239,essv5630193,essv5631465,essv5631905,essv5633943,essv5635976,essv5640187,essv5641125,essv5641262,essv5643959,essv5648702,essv5650338,essv5650442,essv5670867,essv5671787,essv5672669,essv5673467,essv5675590,essv5676860,essv5677732,essv5678946,essv5679637,essv5683825,essv5688132,essv5690141,essv5692049,essv5694863,essv5698039,essv5700240,essv5701080,essv5702197,essv5707419,essv5712435,essv5712611,essv5714389,essv5722394,essv5723921,essv5723953,essv5724642,essv5732240,essv5738072,essv5745074,essv5747726,essv5749533,essv5762497,essv5766335,essv5773997,essv5780437,essv5786024,essv5787953,essv5794862,essv5799072,essv5800780,essv5801413,essv5803216,essv5806292,essv5807425,essv5812123,essv5812650,essv5813001,essv5813678,essv5816004,essv5820972,essv5821996,essv5825216,essv5831383,essv5834945,essv5851382,essv5855205,essv5855505,essv5858092,essv5866453,essv5868543,essv5870848,essv5871753,essv5878788,essv5882887,essv5883171,essv5884375,essv5885037,essv5886508,essv5891209,essv5899920,essv5901561,essv5920966,essv5922774,essv5923966,essv5928241,essv5931672,essv5932490,essv5937129,essv5939453,essv5939784,essv5940742,essv5951084,essv5951132,essv5954013,essv5959060,essv5959211,essv5959326,essv5963869,essv5965280,essv5965335,essv5965350,essv5969045,essv5972124,essv5974677,essv5978467,essv5979075,essv5985570,essv5989514,essv5990101,essv5991070,essv5991250,essv5993427,essv5993762,essv5994443,essv5997694,essv5998119,essv6005572,essv6011467,essv6011613,essv6012078,essv6027434,essv6028335,essv6032109,essv6035940,essv6040829,essv6042582,essv6042587,essv6044419,essv6053094,essv6058176,essv6059203,essv6063579,essv6066088,essv6069039,essv6072390,essv6072748,essv6078561,essv6079796,essv6086199,essv6086549,essv6093191,essv6103904,essv6108372,essv6113627,essv6117756,essv6122795,essv6129291,essv6130279,essv6131969,essv6133414,essv6134604,essv6140657,essv6142004,essv6146300,essv6154276,essv6154431,essv6156669,essv6161424,essv6172914,essv6175237,essv6175357,essv6178089,essv6181341,essv6185820,essv6186597,essv6186717,essv6191601,essv6191951,essv6194183,essv6197313,essv6197366,essv6199429,essv6199770,essv6204344,essv6205353,essv6211165,essv6211568,essv6212988,essv6214095,essv6221054,essv6224876,essv6225800,essv6226627,essv6228720,essv6231944,essv6234765,essv6239221,essv6240991,essv6241924,essv6244691,essv6246072,essv6247281,essv6247479,essv6258489,essv6265122,essv6266096,essv6273412,essv6279148,essv6279475,essv6279719,essv6281476,essv6286765,essv6287490,essv6287869,essv6290555,essv6300044,essv6302686,essv6307412,essv6317076,essv6317091,essv6318757,essv6324178,essv6326756,essv6337906,essv6339707,essv6343716,essv6344023,essv6347709,essv6357829,essv6361569,essv6367525,essv6367867,essv6391429,essv6391818,essv6395439,essv6396485,essv6397483,essv6399190,essv6404248,essv6410581,essv6416002,essv6419027,essv6425592,essv6425893,essv6430631,essv6432023,essv6432025,essv6435646,essv6443605,essv6445387,essv6450209,essv6452456,essv6457568,essv6464835,essv6465710,essv6469356,essv6469707,essv6471708,essv6474611,essv6479147,essv6479552,essv6482893,essv6488077,essv6494184,essv6497970,essv6500668,essv6510252,essv6513074,essv6518177,essv6518871,essv6519435,essv6520422,essv6523508,essv6531665,essv6539627,essv6548233,essv6553516,essv6554091,essv6577184,essv6581596,essv6585173,essv6586974,essv6589722,essv6596805,essv6598371;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=346;samples=NA19676,HG00375,NA19350,NA19355,HG00422,HG00543,HG00542,NA18550,NA18555,NA18559,HG01073,NA18486,NA18489,HG01067,HG01066,NA19077,NA19076,NA19070,HG01060,NA19079,NA19078,HG01069,NA07051,HG00613,HG00281,NA18956,NA18951,NA18950,NA18953,NA18952,NA18959,NA19328,HG00239,HG00589,HG00584,HG00581,HG00740,NA19153,NA19257,HG01492,HG01342,NA18608,HG00512,NA18606,HG01462,NA18517,NA20127,NA18510,NA18519,sample_essv9748423,NA18999,HG00635,NA19160,NA18867,NA18861,NA18868,HG00705,HG00684,HG00707,HG00701,NA18908,NA18909,NA19682,NA18907,HG00708,NA19119,NA19448,NA19449,NA18511,NA19440,NA19114,NA19443,NA19663,NA19701,NA19700,NA19704,HG00346,HG00268,NA19207,NA19204,NA19200,HG00419,HG00418,NA19360,HG00556,NA19209,NA18548,NA19010,NA18545,NA18542,NA19385,NA19384,NA19383,NA19382,NA19381,NA19380,NA19075,NA19074,NA18498,NA18499,NA19062,HG01075,NA19060,HG01378,NA19066,NA19064,NA19065,NA19068,HG01079,NA19072,HG00671,HG00672,NA20276,NA18942,NA18943,NA18940,NA18941,NA18947,NA18944,NA18945,NA18948,NA18949,NA19401,NA19404,NA19088,HG00187,NA19239,NA19238,NA19236,NA19235,NA19625,NA19087,HG01108,HG00595,HG00590,HG01102,HG00690,NA19129,NA18633,NA19247,HG00698,NA19058,NA19057,NA19054,NA18616,NA18615,NA18612,NA18610,HG00250,NA18595,HG00313,HG00259,NA18592,NA19332,HG00524,NA18577,NA18576,NA18573,NA18571,NA18570,NA19901,NA18502,NA18501,NA18507,NA18504,NA18505,NA18508,NA18984,NA18982,NA18983,NA18980,NA18981,NA18988,NA18989,HG00625,NA20294,NA20299,HG00628,HG00629,NA20341,NA20348,NA19171,NA19172,HG01140,NA18873,NA18870,NA18871,NA18874,NA18973,NA18972,NA18976,NA18975,NA18974,NA19471,NA19470,NA19472,NA19711,NA19712,HG00353,HG00560,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19374,NA19375,NA19005,NA18538,NA19000,NA19002,NA19003,NA18536,NA19009,NA19394,NA19395,NA19396,NA19397,NA19390,NA19393,NA18534,NA19398,NA19399,HG00323,HG00702,HG00329,NA19099,NA19098,NA18623,NA19445,NA20815,NA19438,HG00619,NA19435,NA19116,NA19437,HG00614,NA19431,NA19430,HG00611,HG00610,NA19225,NA19189,NA19223,NA18924,NA18923,HG00448,NA19130,NA19131,NA19137,NA19138,HG00689,NA18599,NA18934,HG00318,NA19093,HG00361,HG00437,NA19346,NA12716,HG00537,HG00534,HG00533,HG00530,HG00531,NA18560,NA18561,NA18562,NA18563,NA19916,HG00525,HG00653,HG00650,HG00657,HG00656,NA20289,NA19144,NA19147,HG01171,HG01170,NA18968,NA19467,NA19462,NA19463,NA19461,NA18961,NA18963,NA18964,NA18965,NA19468,NA19469,NA19198,NA19311,NA19312,NA19313,HG00577,HG00578,HG00479,HG00478,HG00472,HG00476,HG00475,NA18520,NA18522,NA18523,HG01488,NA19819,NA19818,NA18549,NA18638,NA19720,HG00501,HG00500,NA19085,NA18636,HG01055,NA19080,NA19081,NA18632,NA19083,HG00114,NA19921,NA19920,NA19428,NA19429,HG00608,NA19434,NA19466,NA19190,NA19197,NA19213,HG01125,HG01082,NA18858,NA18912,NA18917,NA18916,NA18853,NA18856,NA19108,NA19457,NA19455,NA19452,NA19451,NA19102;num_samples_tested=1822;frequency=18.99%;num_unique_samples_tested=1822;nr_frequency=18.99%;PopulationSummary=European 19:Asian 151:Mexican 4:African 151:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 21:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1465911	1466230	.	.	.	ID=gssv327;Name=gssv327;variant_type=CNV;variant_sub_type=Loss;outer_start=1465911;inner_start=1465911;inner_end=1466230;outer_end=1466268;inner_rank=8;num_variants=346;variants=essv9748423,essv5396313,essv5401002,essv5403407,essv5404027,essv5413690,essv5414131,essv5415672,essv5416971,essv5418392,essv5439542,essv5441861,essv5442733,essv5451411,essv5451520,essv5453253,essv5456023,essv5456443,essv5457645,essv5458146,essv5463872,essv5471316,essv5476828,essv5480416,essv5481540,essv5482099,essv5482830,essv5484338,essv5484376,essv5488378,essv5489541,essv5492724,essv5493577,essv5497478,essv5501254,essv5507419,essv5520380,essv5522114,essv5527150,essv5527698,essv5528890,essv5531638,essv5538350,essv5541808,essv5551173,essv5553146,essv5553769,essv5554792,essv5555363,essv5557211,essv5568689,essv5578213,essv5580450,essv5588497,essv5594774,essv5597132,essv5597594,essv5598870,essv5599977,essv5601026,essv5604347,essv5609173,essv5609533,essv5612794,essv5614655,essv5616806,essv5623987,essv5628085,essv5628239,essv5630193,essv5631465,essv5631905,essv5633943,essv5635976,essv5640187,essv5641125,essv5641262,essv5643959,essv5648702,essv5650338,essv5650442,essv5670867,essv5671787,essv5672669,essv5673467,essv5675590,essv5676860,essv5677732,essv5678946,essv5679637,essv5683825,essv5688132,essv5690141,essv5692049,essv5694863,essv5698039,essv5700240,essv5701080,essv5702197,essv5707419,essv5712435,essv5712611,essv5714389,essv5722394,essv5723921,essv5723953,essv5724642,essv5732240,essv5738072,essv5745074,essv5747726,essv5749533,essv5762497,essv5766335,essv5773997,essv5780437,essv5786024,essv5787953,essv5794862,essv5799072,essv5800780,essv5801413,essv5803216,essv5806292,essv5807425,essv5812123,essv5812650,essv5813001,essv5813678,essv5816004,essv5820972,essv5821996,essv5825216,essv5831383,essv5834945,essv5851382,essv5855205,essv5855505,essv5858092,essv5866453,essv5868543,essv5870848,essv5871753,essv5878788,essv5882887,essv5883171,essv5884375,essv5885037,essv5886508,essv5891209,essv5899920,essv5901561,essv5920966,essv5922774,essv5923966,essv5928241,essv5931672,essv5932490,essv5937129,essv5939453,essv5939784,essv5940742,essv5951084,essv5951132,essv5954013,essv5959060,essv5959211,essv5959326,essv5963869,essv5965280,essv5965335,essv5965350,essv5969045,essv5972124,essv5974677,essv5978467,essv5979075,essv5985570,essv5989514,essv5990101,essv5991070,essv5991250,essv5993427,essv5993762,essv5994443,essv5997694,essv5998119,essv6005572,essv6011467,essv6011613,essv6012078,essv6027434,essv6028335,essv6032109,essv6035940,essv6040829,essv6042582,essv6042587,essv6044419,essv6053094,essv6058176,essv6059203,essv6063579,essv6066088,essv6069039,essv6072390,essv6072748,essv6078561,essv6079796,essv6086199,essv6086549,essv6093191,essv6103904,essv6108372,essv6113627,essv6117756,essv6122795,essv6129291,essv6130279,essv6131969,essv6133414,essv6134604,essv6140657,essv6142004,essv6146300,essv6154276,essv6154431,essv6156669,essv6161424,essv6172914,essv6175237,essv6175357,essv6178089,essv6181341,essv6185820,essv6186597,essv6186717,essv6191601,essv6191951,essv6194183,essv6197313,essv6197366,essv6199429,essv6199770,essv6204344,essv6205353,essv6211165,essv6211568,essv6212988,essv6214095,essv6221054,essv6224876,essv6225800,essv6226627,essv6228720,essv6231944,essv6234765,essv6239221,essv6240991,essv6241924,essv6244691,essv6246072,essv6247281,essv6247479,essv6258489,essv6265122,essv6266096,essv6273412,essv6279148,essv6279475,essv6279719,essv6281476,essv6286765,essv6287490,essv6287869,essv6290555,essv6300044,essv6302686,essv6307412,essv6317076,essv6317091,essv6318757,essv6324178,essv6326756,essv6337906,essv6339707,essv6343716,essv6344023,essv6347709,essv6357829,essv6361569,essv6367525,essv6367867,essv6391429,essv6391818,essv6395439,essv6396485,essv6397483,essv6399190,essv6404248,essv6410581,essv6416002,essv6419027,essv6425592,essv6425893,essv6430631,essv6432023,essv6432025,essv6435646,essv6443605,essv6445387,essv6450209,essv6452456,essv6457568,essv6464835,essv6465710,essv6469356,essv6469707,essv6471708,essv6474611,essv6479147,essv6479552,essv6482893,essv6488077,essv6494184,essv6497970,essv6500668,essv6510252,essv6513074,essv6518177,essv6518871,essv6519435,essv6520422,essv6523508,essv6531665,essv6539627,essv6548233,essv6553516,essv6554091,essv6577184,essv6581596,essv6585173,essv6586974,essv6589722,essv6596805,essv6598371;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=346;samples=NA19676,HG00375,NA19350,NA19355,HG00422,HG00543,HG00542,NA18550,NA18555,NA18559,HG01073,NA18486,NA18489,HG01067,HG01066,NA19077,NA19076,NA19070,HG01060,NA19079,NA19078,HG01069,NA07051,HG00613,HG00281,NA18956,NA18951,NA18950,NA18953,NA18952,NA18959,NA19328,HG00239,HG00589,HG00584,HG00581,HG00740,NA19153,NA19257,HG01492,HG01342,NA18608,HG00512,NA18606,HG01462,NA18517,NA20127,NA18510,NA18519,sample_essv9748423,NA18999,HG00635,NA19160,NA18867,NA18861,NA18868,HG00705,HG00684,HG00707,HG00701,NA18908,NA18909,NA19682,NA18907,HG00708,NA19119,NA19448,NA19449,NA18511,NA19440,NA19114,NA19443,NA19663,NA19701,NA19700,NA19704,HG00346,HG00268,NA19207,NA19204,NA19200,HG00419,HG00418,NA19360,HG00556,NA19209,NA18548,NA19010,NA18545,NA18542,NA19385,NA19384,NA19383,NA19382,NA19381,NA19380,NA19075,NA19074,NA18498,NA18499,NA19062,HG01075,NA19060,HG01378,NA19066,NA19064,NA19065,NA19068,HG01079,NA19072,HG00671,HG00672,NA20276,NA18942,NA18943,NA18940,NA18941,NA18947,NA18944,NA18945,NA18948,NA18949,NA19401,NA19404,NA19088,HG00187,NA19239,NA19238,NA19236,NA19235,NA19625,NA19087,HG01108,HG00595,HG00590,HG01102,HG00690,NA19129,NA18633,NA19247,HG00698,NA19058,NA19057,NA19054,NA18616,NA18615,NA18612,NA18610,HG00250,NA18595,HG00313,HG00259,NA18592,NA19332,HG00524,NA18577,NA18576,NA18573,NA18571,NA18570,NA19901,NA18502,NA18501,NA18507,NA18504,NA18505,NA18508,NA18984,NA18982,NA18983,NA18980,NA18981,NA18988,NA18989,HG00625,NA20294,NA20299,HG00628,HG00629,NA20341,NA20348,NA19171,NA19172,HG01140,NA18873,NA18870,NA18871,NA18874,NA18973,NA18972,NA18976,NA18975,NA18974,NA19471,NA19470,NA19472,NA19711,NA19712,HG00353,HG00560,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19374,NA19375,NA19005,NA18538,NA19000,NA19002,NA19003,NA18536,NA19009,NA19394,NA19395,NA19396,NA19397,NA19390,NA19393,NA18534,NA19398,NA19399,HG00323,HG00702,HG00329,NA19099,NA19098,NA18623,NA19445,NA20815,NA19438,HG00619,NA19435,NA19116,NA19437,HG00614,NA19431,NA19430,HG00611,HG00610,NA19225,NA19189,NA19223,NA18924,NA18923,HG00448,NA19130,NA19131,NA19137,NA19138,HG00689,NA18599,NA18934,HG00318,NA19093,HG00361,HG00437,NA19346,NA12716,HG00537,HG00534,HG00533,HG00530,HG00531,NA18560,NA18561,NA18562,NA18563,NA19916,HG00525,HG00653,HG00650,HG00657,HG00656,NA20289,NA19144,NA19147,HG01171,HG01170,NA18968,NA19467,NA19462,NA19463,NA19461,NA18961,NA18963,NA18964,NA18965,NA19468,NA19469,NA19198,NA19311,NA19312,NA19313,HG00577,HG00578,HG00479,HG00478,HG00472,HG00476,HG00475,NA18520,NA18522,NA18523,HG01488,NA19819,NA19818,NA18549,NA18638,NA19720,HG00501,HG00500,NA19085,NA18636,HG01055,NA19080,NA19081,NA18632,NA19083,HG00114,NA19921,NA19920,NA19428,NA19429,HG00608,NA19434,NA19466,NA19190,NA19197,NA19213,HG01125,HG01082,NA18858,NA18912,NA18917,NA18916,NA18853,NA18856,NA19108,NA19457,NA19455,NA19452,NA19451,NA19102;num_samples_tested=1822;frequency=18.99%;num_unique_samples_tested=1822;nr_frequency=18.99%;PopulationSummary=European 19:Asian 151:Mexican 4:African 151:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 21:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1466268	1466268	.	.	.	ID=gssv327;Name=gssv327;variant_type=CNV;variant_sub_type=Loss;outer_start=1465911;inner_start=1465911;inner_end=1466230;outer_end=1466268;inner_rank=8;num_variants=346;variants=essv9748423,essv5396313,essv5401002,essv5403407,essv5404027,essv5413690,essv5414131,essv5415672,essv5416971,essv5418392,essv5439542,essv5441861,essv5442733,essv5451411,essv5451520,essv5453253,essv5456023,essv5456443,essv5457645,essv5458146,essv5463872,essv5471316,essv5476828,essv5480416,essv5481540,essv5482099,essv5482830,essv5484338,essv5484376,essv5488378,essv5489541,essv5492724,essv5493577,essv5497478,essv5501254,essv5507419,essv5520380,essv5522114,essv5527150,essv5527698,essv5528890,essv5531638,essv5538350,essv5541808,essv5551173,essv5553146,essv5553769,essv5554792,essv5555363,essv5557211,essv5568689,essv5578213,essv5580450,essv5588497,essv5594774,essv5597132,essv5597594,essv5598870,essv5599977,essv5601026,essv5604347,essv5609173,essv5609533,essv5612794,essv5614655,essv5616806,essv5623987,essv5628085,essv5628239,essv5630193,essv5631465,essv5631905,essv5633943,essv5635976,essv5640187,essv5641125,essv5641262,essv5643959,essv5648702,essv5650338,essv5650442,essv5670867,essv5671787,essv5672669,essv5673467,essv5675590,essv5676860,essv5677732,essv5678946,essv5679637,essv5683825,essv5688132,essv5690141,essv5692049,essv5694863,essv5698039,essv5700240,essv5701080,essv5702197,essv5707419,essv5712435,essv5712611,essv5714389,essv5722394,essv5723921,essv5723953,essv5724642,essv5732240,essv5738072,essv5745074,essv5747726,essv5749533,essv5762497,essv5766335,essv5773997,essv5780437,essv5786024,essv5787953,essv5794862,essv5799072,essv5800780,essv5801413,essv5803216,essv5806292,essv5807425,essv5812123,essv5812650,essv5813001,essv5813678,essv5816004,essv5820972,essv5821996,essv5825216,essv5831383,essv5834945,essv5851382,essv5855205,essv5855505,essv5858092,essv5866453,essv5868543,essv5870848,essv5871753,essv5878788,essv5882887,essv5883171,essv5884375,essv5885037,essv5886508,essv5891209,essv5899920,essv5901561,essv5920966,essv5922774,essv5923966,essv5928241,essv5931672,essv5932490,essv5937129,essv5939453,essv5939784,essv5940742,essv5951084,essv5951132,essv5954013,essv5959060,essv5959211,essv5959326,essv5963869,essv5965280,essv5965335,essv5965350,essv5969045,essv5972124,essv5974677,essv5978467,essv5979075,essv5985570,essv5989514,essv5990101,essv5991070,essv5991250,essv5993427,essv5993762,essv5994443,essv5997694,essv5998119,essv6005572,essv6011467,essv6011613,essv6012078,essv6027434,essv6028335,essv6032109,essv6035940,essv6040829,essv6042582,essv6042587,essv6044419,essv6053094,essv6058176,essv6059203,essv6063579,essv6066088,essv6069039,essv6072390,essv6072748,essv6078561,essv6079796,essv6086199,essv6086549,essv6093191,essv6103904,essv6108372,essv6113627,essv6117756,essv6122795,essv6129291,essv6130279,essv6131969,essv6133414,essv6134604,essv6140657,essv6142004,essv6146300,essv6154276,essv6154431,essv6156669,essv6161424,essv6172914,essv6175237,essv6175357,essv6178089,essv6181341,essv6185820,essv6186597,essv6186717,essv6191601,essv6191951,essv6194183,essv6197313,essv6197366,essv6199429,essv6199770,essv6204344,essv6205353,essv6211165,essv6211568,essv6212988,essv6214095,essv6221054,essv6224876,essv6225800,essv6226627,essv6228720,essv6231944,essv6234765,essv6239221,essv6240991,essv6241924,essv6244691,essv6246072,essv6247281,essv6247479,essv6258489,essv6265122,essv6266096,essv6273412,essv6279148,essv6279475,essv6279719,essv6281476,essv6286765,essv6287490,essv6287869,essv6290555,essv6300044,essv6302686,essv6307412,essv6317076,essv6317091,essv6318757,essv6324178,essv6326756,essv6337906,essv6339707,essv6343716,essv6344023,essv6347709,essv6357829,essv6361569,essv6367525,essv6367867,essv6391429,essv6391818,essv6395439,essv6396485,essv6397483,essv6399190,essv6404248,essv6410581,essv6416002,essv6419027,essv6425592,essv6425893,essv6430631,essv6432023,essv6432025,essv6435646,essv6443605,essv6445387,essv6450209,essv6452456,essv6457568,essv6464835,essv6465710,essv6469356,essv6469707,essv6471708,essv6474611,essv6479147,essv6479552,essv6482893,essv6488077,essv6494184,essv6497970,essv6500668,essv6510252,essv6513074,essv6518177,essv6518871,essv6519435,essv6520422,essv6523508,essv6531665,essv6539627,essv6548233,essv6553516,essv6554091,essv6577184,essv6581596,essv6585173,essv6586974,essv6589722,essv6596805,essv6598371;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=346;samples=NA19676,HG00375,NA19350,NA19355,HG00422,HG00543,HG00542,NA18550,NA18555,NA18559,HG01073,NA18486,NA18489,HG01067,HG01066,NA19077,NA19076,NA19070,HG01060,NA19079,NA19078,HG01069,NA07051,HG00613,HG00281,NA18956,NA18951,NA18950,NA18953,NA18952,NA18959,NA19328,HG00239,HG00589,HG00584,HG00581,HG00740,NA19153,NA19257,HG01492,HG01342,NA18608,HG00512,NA18606,HG01462,NA18517,NA20127,NA18510,NA18519,sample_essv9748423,NA18999,HG00635,NA19160,NA18867,NA18861,NA18868,HG00705,HG00684,HG00707,HG00701,NA18908,NA18909,NA19682,NA18907,HG00708,NA19119,NA19448,NA19449,NA18511,NA19440,NA19114,NA19443,NA19663,NA19701,NA19700,NA19704,HG00346,HG00268,NA19207,NA19204,NA19200,HG00419,HG00418,NA19360,HG00556,NA19209,NA18548,NA19010,NA18545,NA18542,NA19385,NA19384,NA19383,NA19382,NA19381,NA19380,NA19075,NA19074,NA18498,NA18499,NA19062,HG01075,NA19060,HG01378,NA19066,NA19064,NA19065,NA19068,HG01079,NA19072,HG00671,HG00672,NA20276,NA18942,NA18943,NA18940,NA18941,NA18947,NA18944,NA18945,NA18948,NA18949,NA19401,NA19404,NA19088,HG00187,NA19239,NA19238,NA19236,NA19235,NA19625,NA19087,HG01108,HG00595,HG00590,HG01102,HG00690,NA19129,NA18633,NA19247,HG00698,NA19058,NA19057,NA19054,NA18616,NA18615,NA18612,NA18610,HG00250,NA18595,HG00313,HG00259,NA18592,NA19332,HG00524,NA18577,NA18576,NA18573,NA18571,NA18570,NA19901,NA18502,NA18501,NA18507,NA18504,NA18505,NA18508,NA18984,NA18982,NA18983,NA18980,NA18981,NA18988,NA18989,HG00625,NA20294,NA20299,HG00628,HG00629,NA20341,NA20348,NA19171,NA19172,HG01140,NA18873,NA18870,NA18871,NA18874,NA18973,NA18972,NA18976,NA18975,NA18974,NA19471,NA19470,NA19472,NA19711,NA19712,HG00353,HG00560,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19374,NA19375,NA19005,NA18538,NA19000,NA19002,NA19003,NA18536,NA19009,NA19394,NA19395,NA19396,NA19397,NA19390,NA19393,NA18534,NA19398,NA19399,HG00323,HG00702,HG00329,NA19099,NA19098,NA18623,NA19445,NA20815,NA19438,HG00619,NA19435,NA19116,NA19437,HG00614,NA19431,NA19430,HG00611,HG00610,NA19225,NA19189,NA19223,NA18924,NA18923,HG00448,NA19130,NA19131,NA19137,NA19138,HG00689,NA18599,NA18934,HG00318,NA19093,HG00361,HG00437,NA19346,NA12716,HG00537,HG00534,HG00533,HG00530,HG00531,NA18560,NA18561,NA18562,NA18563,NA19916,HG00525,HG00653,HG00650,HG00657,HG00656,NA20289,NA19144,NA19147,HG01171,HG01170,NA18968,NA19467,NA19462,NA19463,NA19461,NA18961,NA18963,NA18964,NA18965,NA19468,NA19469,NA19198,NA19311,NA19312,NA19313,HG00577,HG00578,HG00479,HG00478,HG00472,HG00476,HG00475,NA18520,NA18522,NA18523,HG01488,NA19819,NA19818,NA18549,NA18638,NA19720,HG00501,HG00500,NA19085,NA18636,HG01055,NA19080,NA19081,NA18632,NA19083,HG00114,NA19921,NA19920,NA19428,NA19429,HG00608,NA19434,NA19466,NA19190,NA19197,NA19213,HG01125,HG01082,NA18858,NA18912,NA18917,NA18916,NA18853,NA18856,NA19108,NA19457,NA19455,NA19452,NA19451,NA19102;num_samples_tested=1822;frequency=18.99%;num_unique_samples_tested=1822;nr_frequency=18.99%;PopulationSummary=European 19:Asian 151:Mexican 4:African 151:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 21:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1183399	1183399	.	.	.	ID=gssv329;Name=gssv329;variant_type=CNV;variant_sub_type=Loss;outer_start=1183399;inner_start=1183408;inner_end=1183744;outer_end=1183745;inner_rank=8;num_variants=92;variants=essv5398259,essv5418766,essv5434280,essv5465241,essv5492979,essv5507509,essv5549681,essv5560832,essv5581180,essv5585922,essv5601093,essv5605806,essv5640761,essv5650707,essv5668182,essv5669228,essv5677508,essv5689300,essv5712419,essv5717657,essv5720768,essv5748541,essv5749614,essv5763188,essv5770629,essv5848923,essv5861847,essv5885116,essv5892946,essv5910444,essv5916807,essv5940370,essv5954327,essv5983254,essv5999528,essv6010561,essv6063511,essv6063925,essv6086244,essv6105175,essv6117765,essv6121162,essv6131316,essv6133384,essv6139409,essv6151367,essv6153278,essv6161479,essv6179947,essv6185697,essv6196338,essv6201177,essv6211939,essv6230316,essv6240718,essv6260648,essv6261554,essv6266824,essv6293240,essv6307777,essv6313643,essv6327485,essv6329865,essv6331138,essv6339447,essv6342496,essv6346924,essv6348798,essv6355570,essv6391109,essv6407286,essv6414921,essv6419526,essv6422432,essv6427194,essv6433471,essv6455939,essv6468715,essv6477402,essv6493791,essv6503217,essv6509430,essv6510773,essv6519482,essv6527997,essv6574790,essv6581210,essv6583372,essv6585409,essv6588959,essv6595273,essv9741757;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=92;samples=NA18564,NA18566,NA18567,NA18561,NA18562,NA18563,NA12827,HG00654,HG00620,HG00704,HG00707,HG00702,HG00708,NA07357,HG00421,NA19359,NA18557,NA19704,HG00345,HG00651,HG00656,NA20289,NA18489,NA18977,HG00237,HG00260,HG00418,NA19360,NA18549,NA18546,NA19712,NA18542,NA19383,NA18572,NA19463,NA18960,NA18499,HG01072,NA19371,NA19007,NA18532,NA18530,NA18536,NA18534,NA19396,NA19397,NA19391,NA18953,NA18624,NA19327,HG00103,NA18940,HG00334,NA19401,HG00337,HG01350,NA20796,HG00584,HG00580,HG00500,NA18635,NA18637,NA19355,NA19625,HG00614,HG00613,NA18608,HG00692,NA18605,HG00699,HG00698,NA18612,NA18613,HG00318,NA18923,NA18593,NA18592,HG01334,sample_essv9741757,NA20126,HG00683,NA19197,NA20758,NA18599,NA19786,NA18610,NA18498,NA18505,HG00536,HG00534,NA19102,HG00531;num_samples_tested=1822;frequency=5.05%;num_unique_samples_tested=1822;nr_frequency=5.04%;PopulationSummary=European 13:Asian 53:Mexican 1:African 23:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1183408	1183744	.	.	.	ID=gssv329;Name=gssv329;variant_type=CNV;variant_sub_type=Loss;outer_start=1183399;inner_start=1183408;inner_end=1183744;outer_end=1183745;inner_rank=8;num_variants=92;variants=essv5398259,essv5418766,essv5434280,essv5465241,essv5492979,essv5507509,essv5549681,essv5560832,essv5581180,essv5585922,essv5601093,essv5605806,essv5640761,essv5650707,essv5668182,essv5669228,essv5677508,essv5689300,essv5712419,essv5717657,essv5720768,essv5748541,essv5749614,essv5763188,essv5770629,essv5848923,essv5861847,essv5885116,essv5892946,essv5910444,essv5916807,essv5940370,essv5954327,essv5983254,essv5999528,essv6010561,essv6063511,essv6063925,essv6086244,essv6105175,essv6117765,essv6121162,essv6131316,essv6133384,essv6139409,essv6151367,essv6153278,essv6161479,essv6179947,essv6185697,essv6196338,essv6201177,essv6211939,essv6230316,essv6240718,essv6260648,essv6261554,essv6266824,essv6293240,essv6307777,essv6313643,essv6327485,essv6329865,essv6331138,essv6339447,essv6342496,essv6346924,essv6348798,essv6355570,essv6391109,essv6407286,essv6414921,essv6419526,essv6422432,essv6427194,essv6433471,essv6455939,essv6468715,essv6477402,essv6493791,essv6503217,essv6509430,essv6510773,essv6519482,essv6527997,essv6574790,essv6581210,essv6583372,essv6585409,essv6588959,essv6595273,essv9741757;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=92;samples=NA18564,NA18566,NA18567,NA18561,NA18562,NA18563,NA12827,HG00654,HG00620,HG00704,HG00707,HG00702,HG00708,NA07357,HG00421,NA19359,NA18557,NA19704,HG00345,HG00651,HG00656,NA20289,NA18489,NA18977,HG00237,HG00260,HG00418,NA19360,NA18549,NA18546,NA19712,NA18542,NA19383,NA18572,NA19463,NA18960,NA18499,HG01072,NA19371,NA19007,NA18532,NA18530,NA18536,NA18534,NA19396,NA19397,NA19391,NA18953,NA18624,NA19327,HG00103,NA18940,HG00334,NA19401,HG00337,HG01350,NA20796,HG00584,HG00580,HG00500,NA18635,NA18637,NA19355,NA19625,HG00614,HG00613,NA18608,HG00692,NA18605,HG00699,HG00698,NA18612,NA18613,HG00318,NA18923,NA18593,NA18592,HG01334,sample_essv9741757,NA20126,HG00683,NA19197,NA20758,NA18599,NA19786,NA18610,NA18498,NA18505,HG00536,HG00534,NA19102,HG00531;num_samples_tested=1822;frequency=5.05%;num_unique_samples_tested=1822;nr_frequency=5.04%;PopulationSummary=European 13:Asian 53:Mexican 1:African 23:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1183745	1183745	.	.	.	ID=gssv329;Name=gssv329;variant_type=CNV;variant_sub_type=Loss;outer_start=1183399;inner_start=1183408;inner_end=1183744;outer_end=1183745;inner_rank=8;num_variants=92;variants=essv5398259,essv5418766,essv5434280,essv5465241,essv5492979,essv5507509,essv5549681,essv5560832,essv5581180,essv5585922,essv5601093,essv5605806,essv5640761,essv5650707,essv5668182,essv5669228,essv5677508,essv5689300,essv5712419,essv5717657,essv5720768,essv5748541,essv5749614,essv5763188,essv5770629,essv5848923,essv5861847,essv5885116,essv5892946,essv5910444,essv5916807,essv5940370,essv5954327,essv5983254,essv5999528,essv6010561,essv6063511,essv6063925,essv6086244,essv6105175,essv6117765,essv6121162,essv6131316,essv6133384,essv6139409,essv6151367,essv6153278,essv6161479,essv6179947,essv6185697,essv6196338,essv6201177,essv6211939,essv6230316,essv6240718,essv6260648,essv6261554,essv6266824,essv6293240,essv6307777,essv6313643,essv6327485,essv6329865,essv6331138,essv6339447,essv6342496,essv6346924,essv6348798,essv6355570,essv6391109,essv6407286,essv6414921,essv6419526,essv6422432,essv6427194,essv6433471,essv6455939,essv6468715,essv6477402,essv6493791,essv6503217,essv6509430,essv6510773,essv6519482,essv6527997,essv6574790,essv6581210,essv6583372,essv6585409,essv6588959,essv6595273,essv9741757;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=92;samples=NA18564,NA18566,NA18567,NA18561,NA18562,NA18563,NA12827,HG00654,HG00620,HG00704,HG00707,HG00702,HG00708,NA07357,HG00421,NA19359,NA18557,NA19704,HG00345,HG00651,HG00656,NA20289,NA18489,NA18977,HG00237,HG00260,HG00418,NA19360,NA18549,NA18546,NA19712,NA18542,NA19383,NA18572,NA19463,NA18960,NA18499,HG01072,NA19371,NA19007,NA18532,NA18530,NA18536,NA18534,NA19396,NA19397,NA19391,NA18953,NA18624,NA19327,HG00103,NA18940,HG00334,NA19401,HG00337,HG01350,NA20796,HG00584,HG00580,HG00500,NA18635,NA18637,NA19355,NA19625,HG00614,HG00613,NA18608,HG00692,NA18605,HG00699,HG00698,NA18612,NA18613,HG00318,NA18923,NA18593,NA18592,HG01334,sample_essv9741757,NA20126,HG00683,NA19197,NA20758,NA18599,NA19786,NA18610,NA18498,NA18505,HG00536,HG00534,NA19102,HG00531;num_samples_tested=1822;frequency=5.05%;num_unique_samples_tested=1822;nr_frequency=5.04%;PopulationSummary=European 13:Asian 53:Mexican 1:African 23:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1598413	1598413	.	.	.	ID=gssv344;Name=gssv344;variant_type=CNV;variant_sub_type=Loss;outer_start=1598413;inner_start=1598413;inner_end=1598580;outer_end=1598601;inner_rank=2;num_variants=450;variants=essv9750646,essv5396149,essv5396411,essv5397563,essv5401685,essv5406360,essv5410628,essv5411981,essv5414259,essv5414933,essv5415954,essv5416958,essv5423424,essv5432871,essv5435077,essv5443214,essv5443804,essv5447734,essv5448062,essv5448907,essv5452041,essv5453799,essv5454282,essv5455494,essv5457314,essv5459712,essv5465043,essv5465085,essv5465702,essv5466018,essv5471351,essv5471357,essv5472324,essv5472448,essv5480228,essv5490309,essv5491948,essv5495344,essv5503479,essv5505495,essv5505868,essv5507268,essv5509514,essv5509573,essv5510878,essv5511278,essv5512851,essv5517074,essv5517949,essv5517953,essv5519389,essv5521618,essv5524858,essv5525175,essv5526789,essv5528195,essv5530827,essv5532300,essv5539922,essv5540251,essv5550248,essv5551605,essv5554245,essv5555326,essv5558810,essv5560038,essv5560566,essv5570830,essv5570846,essv5572281,essv5576928,essv5577638,essv5580002,essv5585639,essv5586488,essv5587767,essv5592079,essv5594143,essv5595889,essv5597038,essv5598186,essv5598338,essv5607350,essv5609013,essv5611680,essv5611984,essv5612605,essv5621469,essv5624676,essv5625120,essv5627193,essv5629615,essv5630121,essv5632389,essv5636269,essv5637380,essv5639604,essv5641442,essv5652332,essv5655572,essv5659577,essv5660437,essv5663765,essv5664321,essv5669268,essv5669363,essv5670715,essv5671807,essv5674970,essv5675001,essv5677015,essv5677697,essv5680170,essv5680585,essv5681930,essv5682903,essv5685989,essv5686758,essv5690915,essv5701510,essv5703175,essv5706799,essv5709883,essv5711296,essv5713226,essv5714263,essv5715661,essv5719551,essv5719674,essv5724902,essv5725166,essv5726476,essv5727829,essv5728695,essv5729317,essv5730167,essv5732216,essv5737014,essv5741004,essv5742636,essv5743890,essv5751080,essv5752383,essv5753638,essv5754690,essv5755734,essv5758590,essv5769689,essv5778641,essv5778790,essv5779054,essv5780450,essv5783705,essv5785569,essv5787293,essv5789544,essv5794898,essv5795485,essv5796075,essv5796167,essv5796712,essv5798784,essv5799562,essv5799767,essv5800608,essv5803001,essv5806527,essv5808589,essv5813169,essv5814999,essv5816063,essv5817169,essv5818662,essv5824248,essv5824439,essv5824870,essv5827810,essv5829153,essv5838836,essv5841126,essv5842247,essv5848961,essv5850184,essv5852832,essv5855555,essv5856373,essv5857413,essv5861386,essv5865553,essv5869212,essv5873431,essv5875323,essv5876341,essv5881611,essv5882292,essv5890984,essv5895978,essv5902254,essv5906954,essv5908627,essv5909153,essv5913493,essv5913600,essv5918120,essv5918816,essv5922773,essv5922942,essv5926739,essv5931039,essv5945642,essv5949132,essv5952055,essv5955412,essv5958664,essv5964151,essv5965909,essv5967632,essv5971409,essv5971449,essv5974237,essv5974341,essv5977523,essv5979575,essv5983326,essv5983653,essv5990978,essv5994378,essv5995956,essv5998608,essv5998842,essv5999000,essv5999698,essv6000476,essv6003771,essv6009097,essv6010868,essv6019252,essv6024126,essv6028094,essv6029517,essv6031567,essv6033098,essv6037174,essv6040088,essv6044604,essv6045526,essv6049037,essv6055625,essv6057941,essv6059269,essv6059393,essv6063237,essv6063495,essv6063509,essv6064067,essv6067300,essv6070975,essv6072716,essv6076421,essv6078545,essv6079747,essv6080540,essv6082461,essv6085025,essv6089090,essv6089120,essv6092574,essv6094569,essv6096703,essv6097410,essv6100264,essv6101026,essv6110359,essv6111969,essv6112644,essv6119852,essv6120255,essv6121292,essv6121546,essv6126272,essv6127498,essv6127630,essv6127826,essv6131270,essv6134637,essv6142179,essv6143736,essv6144567,essv6144633,essv6145920,essv6148996,essv6154489,essv6160111,essv6162325,essv6162859,essv6163450,essv6163516,essv6167559,essv6171148,essv6173906,essv6174363,essv6183688,essv6189725,essv6195379,essv6196751,essv6201245,essv6205800,essv6207868,essv6210325,essv6210597,essv6212542,essv6219021,essv6219210,essv6221827,essv6224571,essv6227801,essv6228690,essv6231956,essv6235955,essv6237717,essv6241989,essv6245122,essv6245168,essv6247874,essv6249825,essv6253254,essv6253580,essv6254951,essv6255171,essv6256174,essv6259259,essv6259863,essv6264563,essv6275018,essv6277620,essv6280162,essv6280590,essv6280940,essv6283756,essv6294300,essv6298538,essv6300192,essv6303979,essv6304603,essv6306839,essv6308867,essv6311986,essv6325084,essv6326214,essv6327136,essv6329825,essv6338309,essv6348733,essv6351801,essv6352849,essv6353719,essv6354946,essv6357595,essv6359965,essv6360176,essv6362748,essv6363966,essv6369913,essv6374888,essv6377747,essv6377898,essv6378933,essv6380279,essv6384137,essv6385494,essv6386927,essv6388925,essv6391091,essv6393332,essv6399211,essv6401653,essv6402388,essv6407375,essv6421976,essv6425099,essv6426837,essv6432484,essv6439886,essv6441883,essv6443823,essv6452841,essv6454923,essv6455345,essv6457687,essv6458089,essv6461434,essv6463171,essv6466279,essv6466973,essv6468785,essv6468856,essv6469104,essv6475010,essv6475988,essv6476219,essv6477385,essv6480235,essv6481848,essv6483119,essv6484789,essv6486017,essv6488545,essv6488614,essv6492092,essv6496619,essv6503940,essv6505025,essv6506144,essv6506618,essv6507581,essv6511413,essv6513512,essv6517435,essv6518579,essv6518958,essv6520103,essv6523303,essv6523892,essv6524424,essv6528908,essv6530838,essv6531138,essv6533658,essv6534451,essv6534746,essv6544194,essv6547015,essv6547938,essv6548485,essv6551932,essv6560113,essv6561401,essv6573562,essv6576524,essv6577219,essv6579236,essv6579272,essv6579480,essv6582034,essv6582422,essv6583639,essv6583777,essv6587828,essv6592928,essv3827771;num_studies=3;studies=1000GenomesPhase1,Boomsma2014,Levy2007;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,SangerSequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,AssemblyComparison;num_samples=450;samples=NA18632,NA19774,NA19770,HG01350,HG00271,HG00270,HG00273,HG00272,HG00275,HG00274,HG00277,HG00276,HG01390,HG00372,HG00373,HG00375,HG00377,NA19350,NA19355,HG00422,HG00543,NA19359,HG00428,NA18557,NA18559,HG01456,HG01455,HG01515,HG01067,HG01066,HG01060,HG00259,HG01069,NA19436,NA19431,HG00640,HG00160,HuRef,HG00280,HG00281,HG00282,HG00284,HG00285,HG00278,NA19328,HG00310,NA19321,NA19327,HG00237,HG00236,HG00233,HG00232,HG00239,HG00584,HG00583,HG00581,HG00740,HG00672,HG01492,NA19749,sample_essv9750646,HG00542,HG00306,HG00309,HG00308,HG01187,HG00512,HG00513,NA18602,HG01188,NA18606,NA20586,HG00125,HG00124,HG00127,HG00126,HG00120,HG00123,HG01462,HG01334,NA20127,NA20126,NA18519,NA20336,NA20334,NA20332,HG01095,HG00705,HG00704,HG00707,HG00708,NA19448,NA19449,NA19444,NA19445,NA19446,NA19440,NA19443,NA19703,NA19701,NA07347,NA19707,NA19704,HG00345,HG00344,HG01384,HG00346,HG01383,HG00343,HG00342,HG01389,HG00268,HG00269,HG00266,HG00267,HG00264,HG00265,HG00262,HG00263,HG00260,HG00261,HG00419,HG00418,HG00553,HG00554,NA19360,NA18548,NA18549,NA18544,NA18542,NA18543,NA19385,NA19384,NA19383,NA19382,NA19381,NA19380,NA19074,NA18499,HG01070,HG01072,HG01073,HG01377,HG01079,HG01375,HG01374,NA19072,HG00176,HG00177,HG00174,HG01356,HG00173,HG00171,HG01351,HG00671,HG00178,HG00179,NA20276,NA20278,NA19403,NA19404,HG01055,HG00189,HG00188,HG00182,HG00181,HG00180,HG00187,HG00186,HG00185,HG00369,HG00247,NA18934,HG01108,HG01107,HG00590,HG01101,HG01102,HG00693,HG00692,HG00699,NA19756,NA19759,HG00366,NA19835,NA19834,NA18616,HG00256,HG00254,HG00253,NA18613,HG00318,HG00319,NA18595,NA18597,HG00315,HG00312,HG00313,NA18593,HG00258,NA19334,NA19332,HG00524,NA19331,NA19338,NA18577,NA19625,NA19904,HG00138,HG00139,NA19901,NA19900,HG00133,HG00131,NA19909,NA19908,NA20506,NA20291,NA20294,HG00620,NA20296,HG00149,HG00148,HG00146,HG00144,HG00143,HG00142,HG00141,HG00140,NA20342,NA20341,NA20340,NA20346,NA20344,NA20348,HG01140,NA12761,HG01148,NA18933,NA18977,NA19471,NA19470,NA19473,NA19472,NA19474,NA19711,NA19712,NA19717,HG00353,HG00357,HG00337,NA19783,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19374,NA19375,NA19000,NA18530,NA18536,NA18534,NA19394,NA19395,NA19396,NA19397,NA19390,NA19391,NA19393,NA19398,NA19399,HG00327,HG00326,HG00325,HG00324,HG00323,HG00321,HG00320,HG00329,HG00328,HG01360,NA18623,NA18622,HG01366,NA20314,NA18610,NA20317,HG00103,HG00100,NA12342,HG00106,HG00662,HG00663,HG00108,NA20819,NA19439,NA19438,HG00619,NA19435,NA19434,NA19437,HG00614,HG00613,NA19430,HG00190,NA19223,HG00442,HG00443,HG00449,HG01134,HG01137,HG01136,HG00684,HG00689,HG00257,NA19700,NA18617,NA19985,NA19982,HG00252,HG00244,HG00245,HG00246,HG00368,HG00251,HG00242,HG00243,NA18582,HG00361,HG00250,HG00367,HG00249,HG01365,HG00437,HG00436,HG00650,NA19347,NA19346,HG00536,HG00537,HG00531,NA18596,NA20289,NA19916,NA19917,NA19914,NA18619,HG01250,HG01251,HG01253,HG00653,HG00651,NA12275,HG00657,HG00656,HG00654,NA20287,NA20282,NA20281,HG00096,HG00158,HG00159,HG00154,HG00155,HG00156,HG00157,HG00150,HG00098,HG00152,NA20356,HG00151,HG01174,HG01171,HG01170,HG01173,NA19466,NA19467,NA19462,NA19463,NA19461,NA18963,NA19468,NA19469,NA19318,NA19319,NA19315,NA19316,NA19317,NA19311,NA19312,NA19313,HG00479,HG00478,HG00472,HG00476,HG00475,NA18520,NA19819,NA19818,HG00334,HG00335,HG00336,NA12154,HG00330,HG00331,HG01353,HG00136,HG00338,HG00339,HG00137,HG00501,HG00500,NA19084,NA18635,NA18636,NA19087,HG01052,NA19082,NA19083,NA20322,HG00111,HG00112,HG00114,HG00115,HG00116,HG00117,HG00118,HG00119,HG00463,NA19921,NA19920,NA19428,NA19429,HG00608,NA18637,HG00607,NA19009,HG01124,HG01125,HG01080,HG01082,HG00736,NA19457,NA19456,NA19455,NA19453,NA19452,NA19451;num_samples_tested=1823;frequency=24.68%;num_unique_samples_tested=1823;nr_frequency=24.68%;PopulationSummary=European 159:Asian 93:Mexican 7:African 135:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 56:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1598413	1598580	.	.	.	ID=gssv344;Name=gssv344;variant_type=CNV;variant_sub_type=Loss;outer_start=1598413;inner_start=1598413;inner_end=1598580;outer_end=1598601;inner_rank=2;num_variants=450;variants=essv9750646,essv5396149,essv5396411,essv5397563,essv5401685,essv5406360,essv5410628,essv5411981,essv5414259,essv5414933,essv5415954,essv5416958,essv5423424,essv5432871,essv5435077,essv5443214,essv5443804,essv5447734,essv5448062,essv5448907,essv5452041,essv5453799,essv5454282,essv5455494,essv5457314,essv5459712,essv5465043,essv5465085,essv5465702,essv5466018,essv5471351,essv5471357,essv5472324,essv5472448,essv5480228,essv5490309,essv5491948,essv5495344,essv5503479,essv5505495,essv5505868,essv5507268,essv5509514,essv5509573,essv5510878,essv5511278,essv5512851,essv5517074,essv5517949,essv5517953,essv5519389,essv5521618,essv5524858,essv5525175,essv5526789,essv5528195,essv5530827,essv5532300,essv5539922,essv5540251,essv5550248,essv5551605,essv5554245,essv5555326,essv5558810,essv5560038,essv5560566,essv5570830,essv5570846,essv5572281,essv5576928,essv5577638,essv5580002,essv5585639,essv5586488,essv5587767,essv5592079,essv5594143,essv5595889,essv5597038,essv5598186,essv5598338,essv5607350,essv5609013,essv5611680,essv5611984,essv5612605,essv5621469,essv5624676,essv5625120,essv5627193,essv5629615,essv5630121,essv5632389,essv5636269,essv5637380,essv5639604,essv5641442,essv5652332,essv5655572,essv5659577,essv5660437,essv5663765,essv5664321,essv5669268,essv5669363,essv5670715,essv5671807,essv5674970,essv5675001,essv5677015,essv5677697,essv5680170,essv5680585,essv5681930,essv5682903,essv5685989,essv5686758,essv5690915,essv5701510,essv5703175,essv5706799,essv5709883,essv5711296,essv5713226,essv5714263,essv5715661,essv5719551,essv5719674,essv5724902,essv5725166,essv5726476,essv5727829,essv5728695,essv5729317,essv5730167,essv5732216,essv5737014,essv5741004,essv5742636,essv5743890,essv5751080,essv5752383,essv5753638,essv5754690,essv5755734,essv5758590,essv5769689,essv5778641,essv5778790,essv5779054,essv5780450,essv5783705,essv5785569,essv5787293,essv5789544,essv5794898,essv5795485,essv5796075,essv5796167,essv5796712,essv5798784,essv5799562,essv5799767,essv5800608,essv5803001,essv5806527,essv5808589,essv5813169,essv5814999,essv5816063,essv5817169,essv5818662,essv5824248,essv5824439,essv5824870,essv5827810,essv5829153,essv5838836,essv5841126,essv5842247,essv5848961,essv5850184,essv5852832,essv5855555,essv5856373,essv5857413,essv5861386,essv5865553,essv5869212,essv5873431,essv5875323,essv5876341,essv5881611,essv5882292,essv5890984,essv5895978,essv5902254,essv5906954,essv5908627,essv5909153,essv5913493,essv5913600,essv5918120,essv5918816,essv5922773,essv5922942,essv5926739,essv5931039,essv5945642,essv5949132,essv5952055,essv5955412,essv5958664,essv5964151,essv5965909,essv5967632,essv5971409,essv5971449,essv5974237,essv5974341,essv5977523,essv5979575,essv5983326,essv5983653,essv5990978,essv5994378,essv5995956,essv5998608,essv5998842,essv5999000,essv5999698,essv6000476,essv6003771,essv6009097,essv6010868,essv6019252,essv6024126,essv6028094,essv6029517,essv6031567,essv6033098,essv6037174,essv6040088,essv6044604,essv6045526,essv6049037,essv6055625,essv6057941,essv6059269,essv6059393,essv6063237,essv6063495,essv6063509,essv6064067,essv6067300,essv6070975,essv6072716,essv6076421,essv6078545,essv6079747,essv6080540,essv6082461,essv6085025,essv6089090,essv6089120,essv6092574,essv6094569,essv6096703,essv6097410,essv6100264,essv6101026,essv6110359,essv6111969,essv6112644,essv6119852,essv6120255,essv6121292,essv6121546,essv6126272,essv6127498,essv6127630,essv6127826,essv6131270,essv6134637,essv6142179,essv6143736,essv6144567,essv6144633,essv6145920,essv6148996,essv6154489,essv6160111,essv6162325,essv6162859,essv6163450,essv6163516,essv6167559,essv6171148,essv6173906,essv6174363,essv6183688,essv6189725,essv6195379,essv6196751,essv6201245,essv6205800,essv6207868,essv6210325,essv6210597,essv6212542,essv6219021,essv6219210,essv6221827,essv6224571,essv6227801,essv6228690,essv6231956,essv6235955,essv6237717,essv6241989,essv6245122,essv6245168,essv6247874,essv6249825,essv6253254,essv6253580,essv6254951,essv6255171,essv6256174,essv6259259,essv6259863,essv6264563,essv6275018,essv6277620,essv6280162,essv6280590,essv6280940,essv6283756,essv6294300,essv6298538,essv6300192,essv6303979,essv6304603,essv6306839,essv6308867,essv6311986,essv6325084,essv6326214,essv6327136,essv6329825,essv6338309,essv6348733,essv6351801,essv6352849,essv6353719,essv6354946,essv6357595,essv6359965,essv6360176,essv6362748,essv6363966,essv6369913,essv6374888,essv6377747,essv6377898,essv6378933,essv6380279,essv6384137,essv6385494,essv6386927,essv6388925,essv6391091,essv6393332,essv6399211,essv6401653,essv6402388,essv6407375,essv6421976,essv6425099,essv6426837,essv6432484,essv6439886,essv6441883,essv6443823,essv6452841,essv6454923,essv6455345,essv6457687,essv6458089,essv6461434,essv6463171,essv6466279,essv6466973,essv6468785,essv6468856,essv6469104,essv6475010,essv6475988,essv6476219,essv6477385,essv6480235,essv6481848,essv6483119,essv6484789,essv6486017,essv6488545,essv6488614,essv6492092,essv6496619,essv6503940,essv6505025,essv6506144,essv6506618,essv6507581,essv6511413,essv6513512,essv6517435,essv6518579,essv6518958,essv6520103,essv6523303,essv6523892,essv6524424,essv6528908,essv6530838,essv6531138,essv6533658,essv6534451,essv6534746,essv6544194,essv6547015,essv6547938,essv6548485,essv6551932,essv6560113,essv6561401,essv6573562,essv6576524,essv6577219,essv6579236,essv6579272,essv6579480,essv6582034,essv6582422,essv6583639,essv6583777,essv6587828,essv6592928,essv3827771;num_studies=3;studies=1000GenomesPhase1,Boomsma2014,Levy2007;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,SangerSequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,AssemblyComparison;num_samples=450;samples=NA18632,NA19774,NA19770,HG01350,HG00271,HG00270,HG00273,HG00272,HG00275,HG00274,HG00277,HG00276,HG01390,HG00372,HG00373,HG00375,HG00377,NA19350,NA19355,HG00422,HG00543,NA19359,HG00428,NA18557,NA18559,HG01456,HG01455,HG01515,HG01067,HG01066,HG01060,HG00259,HG01069,NA19436,NA19431,HG00640,HG00160,HuRef,HG00280,HG00281,HG00282,HG00284,HG00285,HG00278,NA19328,HG00310,NA19321,NA19327,HG00237,HG00236,HG00233,HG00232,HG00239,HG00584,HG00583,HG00581,HG00740,HG00672,HG01492,NA19749,sample_essv9750646,HG00542,HG00306,HG00309,HG00308,HG01187,HG00512,HG00513,NA18602,HG01188,NA18606,NA20586,HG00125,HG00124,HG00127,HG00126,HG00120,HG00123,HG01462,HG01334,NA20127,NA20126,NA18519,NA20336,NA20334,NA20332,HG01095,HG00705,HG00704,HG00707,HG00708,NA19448,NA19449,NA19444,NA19445,NA19446,NA19440,NA19443,NA19703,NA19701,NA07347,NA19707,NA19704,HG00345,HG00344,HG01384,HG00346,HG01383,HG00343,HG00342,HG01389,HG00268,HG00269,HG00266,HG00267,HG00264,HG00265,HG00262,HG00263,HG00260,HG00261,HG00419,HG00418,HG00553,HG00554,NA19360,NA18548,NA18549,NA18544,NA18542,NA18543,NA19385,NA19384,NA19383,NA19382,NA19381,NA19380,NA19074,NA18499,HG01070,HG01072,HG01073,HG01377,HG01079,HG01375,HG01374,NA19072,HG00176,HG00177,HG00174,HG01356,HG00173,HG00171,HG01351,HG00671,HG00178,HG00179,NA20276,NA20278,NA19403,NA19404,HG01055,HG00189,HG00188,HG00182,HG00181,HG00180,HG00187,HG00186,HG00185,HG00369,HG00247,NA18934,HG01108,HG01107,HG00590,HG01101,HG01102,HG00693,HG00692,HG00699,NA19756,NA19759,HG00366,NA19835,NA19834,NA18616,HG00256,HG00254,HG00253,NA18613,HG00318,HG00319,NA18595,NA18597,HG00315,HG00312,HG00313,NA18593,HG00258,NA19334,NA19332,HG00524,NA19331,NA19338,NA18577,NA19625,NA19904,HG00138,HG00139,NA19901,NA19900,HG00133,HG00131,NA19909,NA19908,NA20506,NA20291,NA20294,HG00620,NA20296,HG00149,HG00148,HG00146,HG00144,HG00143,HG00142,HG00141,HG00140,NA20342,NA20341,NA20340,NA20346,NA20344,NA20348,HG01140,NA12761,HG01148,NA18933,NA18977,NA19471,NA19470,NA19473,NA19472,NA19474,NA19711,NA19712,NA19717,HG00353,HG00357,HG00337,NA19783,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19374,NA19375,NA19000,NA18530,NA18536,NA18534,NA19394,NA19395,NA19396,NA19397,NA19390,NA19391,NA19393,NA19398,NA19399,HG00327,HG00326,HG00325,HG00324,HG00323,HG00321,HG00320,HG00329,HG00328,HG01360,NA18623,NA18622,HG01366,NA20314,NA18610,NA20317,HG00103,HG00100,NA12342,HG00106,HG00662,HG00663,HG00108,NA20819,NA19439,NA19438,HG00619,NA19435,NA19434,NA19437,HG00614,HG00613,NA19430,HG00190,NA19223,HG00442,HG00443,HG00449,HG01134,HG01137,HG01136,HG00684,HG00689,HG00257,NA19700,NA18617,NA19985,NA19982,HG00252,HG00244,HG00245,HG00246,HG00368,HG00251,HG00242,HG00243,NA18582,HG00361,HG00250,HG00367,HG00249,HG01365,HG00437,HG00436,HG00650,NA19347,NA19346,HG00536,HG00537,HG00531,NA18596,NA20289,NA19916,NA19917,NA19914,NA18619,HG01250,HG01251,HG01253,HG00653,HG00651,NA12275,HG00657,HG00656,HG00654,NA20287,NA20282,NA20281,HG00096,HG00158,HG00159,HG00154,HG00155,HG00156,HG00157,HG00150,HG00098,HG00152,NA20356,HG00151,HG01174,HG01171,HG01170,HG01173,NA19466,NA19467,NA19462,NA19463,NA19461,NA18963,NA19468,NA19469,NA19318,NA19319,NA19315,NA19316,NA19317,NA19311,NA19312,NA19313,HG00479,HG00478,HG00472,HG00476,HG00475,NA18520,NA19819,NA19818,HG00334,HG00335,HG00336,NA12154,HG00330,HG00331,HG01353,HG00136,HG00338,HG00339,HG00137,HG00501,HG00500,NA19084,NA18635,NA18636,NA19087,HG01052,NA19082,NA19083,NA20322,HG00111,HG00112,HG00114,HG00115,HG00116,HG00117,HG00118,HG00119,HG00463,NA19921,NA19920,NA19428,NA19429,HG00608,NA18637,HG00607,NA19009,HG01124,HG01125,HG01080,HG01082,HG00736,NA19457,NA19456,NA19455,NA19453,NA19452,NA19451;num_samples_tested=1823;frequency=24.68%;num_unique_samples_tested=1823;nr_frequency=24.68%;PopulationSummary=European 159:Asian 93:Mexican 7:African 135:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 56:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1598601	1598601	.	.	.	ID=gssv344;Name=gssv344;variant_type=CNV;variant_sub_type=Loss;outer_start=1598413;inner_start=1598413;inner_end=1598580;outer_end=1598601;inner_rank=2;num_variants=450;variants=essv9750646,essv5396149,essv5396411,essv5397563,essv5401685,essv5406360,essv5410628,essv5411981,essv5414259,essv5414933,essv5415954,essv5416958,essv5423424,essv5432871,essv5435077,essv5443214,essv5443804,essv5447734,essv5448062,essv5448907,essv5452041,essv5453799,essv5454282,essv5455494,essv5457314,essv5459712,essv5465043,essv5465085,essv5465702,essv5466018,essv5471351,essv5471357,essv5472324,essv5472448,essv5480228,essv5490309,essv5491948,essv5495344,essv5503479,essv5505495,essv5505868,essv5507268,essv5509514,essv5509573,essv5510878,essv5511278,essv5512851,essv5517074,essv5517949,essv5517953,essv5519389,essv5521618,essv5524858,essv5525175,essv5526789,essv5528195,essv5530827,essv5532300,essv5539922,essv5540251,essv5550248,essv5551605,essv5554245,essv5555326,essv5558810,essv5560038,essv5560566,essv5570830,essv5570846,essv5572281,essv5576928,essv5577638,essv5580002,essv5585639,essv5586488,essv5587767,essv5592079,essv5594143,essv5595889,essv5597038,essv5598186,essv5598338,essv5607350,essv5609013,essv5611680,essv5611984,essv5612605,essv5621469,essv5624676,essv5625120,essv5627193,essv5629615,essv5630121,essv5632389,essv5636269,essv5637380,essv5639604,essv5641442,essv5652332,essv5655572,essv5659577,essv5660437,essv5663765,essv5664321,essv5669268,essv5669363,essv5670715,essv5671807,essv5674970,essv5675001,essv5677015,essv5677697,essv5680170,essv5680585,essv5681930,essv5682903,essv5685989,essv5686758,essv5690915,essv5701510,essv5703175,essv5706799,essv5709883,essv5711296,essv5713226,essv5714263,essv5715661,essv5719551,essv5719674,essv5724902,essv5725166,essv5726476,essv5727829,essv5728695,essv5729317,essv5730167,essv5732216,essv5737014,essv5741004,essv5742636,essv5743890,essv5751080,essv5752383,essv5753638,essv5754690,essv5755734,essv5758590,essv5769689,essv5778641,essv5778790,essv5779054,essv5780450,essv5783705,essv5785569,essv5787293,essv5789544,essv5794898,essv5795485,essv5796075,essv5796167,essv5796712,essv5798784,essv5799562,essv5799767,essv5800608,essv5803001,essv5806527,essv5808589,essv5813169,essv5814999,essv5816063,essv5817169,essv5818662,essv5824248,essv5824439,essv5824870,essv5827810,essv5829153,essv5838836,essv5841126,essv5842247,essv5848961,essv5850184,essv5852832,essv5855555,essv5856373,essv5857413,essv5861386,essv5865553,essv5869212,essv5873431,essv5875323,essv5876341,essv5881611,essv5882292,essv5890984,essv5895978,essv5902254,essv5906954,essv5908627,essv5909153,essv5913493,essv5913600,essv5918120,essv5918816,essv5922773,essv5922942,essv5926739,essv5931039,essv5945642,essv5949132,essv5952055,essv5955412,essv5958664,essv5964151,essv5965909,essv5967632,essv5971409,essv5971449,essv5974237,essv5974341,essv5977523,essv5979575,essv5983326,essv5983653,essv5990978,essv5994378,essv5995956,essv5998608,essv5998842,essv5999000,essv5999698,essv6000476,essv6003771,essv6009097,essv6010868,essv6019252,essv6024126,essv6028094,essv6029517,essv6031567,essv6033098,essv6037174,essv6040088,essv6044604,essv6045526,essv6049037,essv6055625,essv6057941,essv6059269,essv6059393,essv6063237,essv6063495,essv6063509,essv6064067,essv6067300,essv6070975,essv6072716,essv6076421,essv6078545,essv6079747,essv6080540,essv6082461,essv6085025,essv6089090,essv6089120,essv6092574,essv6094569,essv6096703,essv6097410,essv6100264,essv6101026,essv6110359,essv6111969,essv6112644,essv6119852,essv6120255,essv6121292,essv6121546,essv6126272,essv6127498,essv6127630,essv6127826,essv6131270,essv6134637,essv6142179,essv6143736,essv6144567,essv6144633,essv6145920,essv6148996,essv6154489,essv6160111,essv6162325,essv6162859,essv6163450,essv6163516,essv6167559,essv6171148,essv6173906,essv6174363,essv6183688,essv6189725,essv6195379,essv6196751,essv6201245,essv6205800,essv6207868,essv6210325,essv6210597,essv6212542,essv6219021,essv6219210,essv6221827,essv6224571,essv6227801,essv6228690,essv6231956,essv6235955,essv6237717,essv6241989,essv6245122,essv6245168,essv6247874,essv6249825,essv6253254,essv6253580,essv6254951,essv6255171,essv6256174,essv6259259,essv6259863,essv6264563,essv6275018,essv6277620,essv6280162,essv6280590,essv6280940,essv6283756,essv6294300,essv6298538,essv6300192,essv6303979,essv6304603,essv6306839,essv6308867,essv6311986,essv6325084,essv6326214,essv6327136,essv6329825,essv6338309,essv6348733,essv6351801,essv6352849,essv6353719,essv6354946,essv6357595,essv6359965,essv6360176,essv6362748,essv6363966,essv6369913,essv6374888,essv6377747,essv6377898,essv6378933,essv6380279,essv6384137,essv6385494,essv6386927,essv6388925,essv6391091,essv6393332,essv6399211,essv6401653,essv6402388,essv6407375,essv6421976,essv6425099,essv6426837,essv6432484,essv6439886,essv6441883,essv6443823,essv6452841,essv6454923,essv6455345,essv6457687,essv6458089,essv6461434,essv6463171,essv6466279,essv6466973,essv6468785,essv6468856,essv6469104,essv6475010,essv6475988,essv6476219,essv6477385,essv6480235,essv6481848,essv6483119,essv6484789,essv6486017,essv6488545,essv6488614,essv6492092,essv6496619,essv6503940,essv6505025,essv6506144,essv6506618,essv6507581,essv6511413,essv6513512,essv6517435,essv6518579,essv6518958,essv6520103,essv6523303,essv6523892,essv6524424,essv6528908,essv6530838,essv6531138,essv6533658,essv6534451,essv6534746,essv6544194,essv6547015,essv6547938,essv6548485,essv6551932,essv6560113,essv6561401,essv6573562,essv6576524,essv6577219,essv6579236,essv6579272,essv6579480,essv6582034,essv6582422,essv6583639,essv6583777,essv6587828,essv6592928,essv3827771;num_studies=3;studies=1000GenomesPhase1,Boomsma2014,Levy2007;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,SangerSequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,AssemblyComparison;num_samples=450;samples=NA18632,NA19774,NA19770,HG01350,HG00271,HG00270,HG00273,HG00272,HG00275,HG00274,HG00277,HG00276,HG01390,HG00372,HG00373,HG00375,HG00377,NA19350,NA19355,HG00422,HG00543,NA19359,HG00428,NA18557,NA18559,HG01456,HG01455,HG01515,HG01067,HG01066,HG01060,HG00259,HG01069,NA19436,NA19431,HG00640,HG00160,HuRef,HG00280,HG00281,HG00282,HG00284,HG00285,HG00278,NA19328,HG00310,NA19321,NA19327,HG00237,HG00236,HG00233,HG00232,HG00239,HG00584,HG00583,HG00581,HG00740,HG00672,HG01492,NA19749,sample_essv9750646,HG00542,HG00306,HG00309,HG00308,HG01187,HG00512,HG00513,NA18602,HG01188,NA18606,NA20586,HG00125,HG00124,HG00127,HG00126,HG00120,HG00123,HG01462,HG01334,NA20127,NA20126,NA18519,NA20336,NA20334,NA20332,HG01095,HG00705,HG00704,HG00707,HG00708,NA19448,NA19449,NA19444,NA19445,NA19446,NA19440,NA19443,NA19703,NA19701,NA07347,NA19707,NA19704,HG00345,HG00344,HG01384,HG00346,HG01383,HG00343,HG00342,HG01389,HG00268,HG00269,HG00266,HG00267,HG00264,HG00265,HG00262,HG00263,HG00260,HG00261,HG00419,HG00418,HG00553,HG00554,NA19360,NA18548,NA18549,NA18544,NA18542,NA18543,NA19385,NA19384,NA19383,NA19382,NA19381,NA19380,NA19074,NA18499,HG01070,HG01072,HG01073,HG01377,HG01079,HG01375,HG01374,NA19072,HG00176,HG00177,HG00174,HG01356,HG00173,HG00171,HG01351,HG00671,HG00178,HG00179,NA20276,NA20278,NA19403,NA19404,HG01055,HG00189,HG00188,HG00182,HG00181,HG00180,HG00187,HG00186,HG00185,HG00369,HG00247,NA18934,HG01108,HG01107,HG00590,HG01101,HG01102,HG00693,HG00692,HG00699,NA19756,NA19759,HG00366,NA19835,NA19834,NA18616,HG00256,HG00254,HG00253,NA18613,HG00318,HG00319,NA18595,NA18597,HG00315,HG00312,HG00313,NA18593,HG00258,NA19334,NA19332,HG00524,NA19331,NA19338,NA18577,NA19625,NA19904,HG00138,HG00139,NA19901,NA19900,HG00133,HG00131,NA19909,NA19908,NA20506,NA20291,NA20294,HG00620,NA20296,HG00149,HG00148,HG00146,HG00144,HG00143,HG00142,HG00141,HG00140,NA20342,NA20341,NA20340,NA20346,NA20344,NA20348,HG01140,NA12761,HG01148,NA18933,NA18977,NA19471,NA19470,NA19473,NA19472,NA19474,NA19711,NA19712,NA19717,HG00353,HG00357,HG00337,NA19783,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19374,NA19375,NA19000,NA18530,NA18536,NA18534,NA19394,NA19395,NA19396,NA19397,NA19390,NA19391,NA19393,NA19398,NA19399,HG00327,HG00326,HG00325,HG00324,HG00323,HG00321,HG00320,HG00329,HG00328,HG01360,NA18623,NA18622,HG01366,NA20314,NA18610,NA20317,HG00103,HG00100,NA12342,HG00106,HG00662,HG00663,HG00108,NA20819,NA19439,NA19438,HG00619,NA19435,NA19434,NA19437,HG00614,HG00613,NA19430,HG00190,NA19223,HG00442,HG00443,HG00449,HG01134,HG01137,HG01136,HG00684,HG00689,HG00257,NA19700,NA18617,NA19985,NA19982,HG00252,HG00244,HG00245,HG00246,HG00368,HG00251,HG00242,HG00243,NA18582,HG00361,HG00250,HG00367,HG00249,HG01365,HG00437,HG00436,HG00650,NA19347,NA19346,HG00536,HG00537,HG00531,NA18596,NA20289,NA19916,NA19917,NA19914,NA18619,HG01250,HG01251,HG01253,HG00653,HG00651,NA12275,HG00657,HG00656,HG00654,NA20287,NA20282,NA20281,HG00096,HG00158,HG00159,HG00154,HG00155,HG00156,HG00157,HG00150,HG00098,HG00152,NA20356,HG00151,HG01174,HG01171,HG01170,HG01173,NA19466,NA19467,NA19462,NA19463,NA19461,NA18963,NA19468,NA19469,NA19318,NA19319,NA19315,NA19316,NA19317,NA19311,NA19312,NA19313,HG00479,HG00478,HG00472,HG00476,HG00475,NA18520,NA19819,NA19818,HG00334,HG00335,HG00336,NA12154,HG00330,HG00331,HG01353,HG00136,HG00338,HG00339,HG00137,HG00501,HG00500,NA19084,NA18635,NA18636,NA19087,HG01052,NA19082,NA19083,NA20322,HG00111,HG00112,HG00114,HG00115,HG00116,HG00117,HG00118,HG00119,HG00463,NA19921,NA19920,NA19428,NA19429,HG00608,NA18637,HG00607,NA19009,HG01124,HG01125,HG01080,HG01082,HG00736,NA19457,NA19456,NA19455,NA19453,NA19452,NA19451;num_samples_tested=1823;frequency=24.68%;num_unique_samples_tested=1823;nr_frequency=24.68%;PopulationSummary=European 159:Asian 93:Mexican 7:African 135:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 56:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1058898	1058898	.	.	.	ID=gssv354;Name=gssv354;variant_type=CNV;variant_sub_type=Loss;outer_start=1058898;inner_start=1058906;inner_end=1058985;outer_end=1058993;inner_rank=1;num_variants=2;variants=essv9764283,nssv178771;num_studies=2;studies=Mills2006,Boomsma2014;num_platforms=2;platforms=SangerSequencing,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,SplitRead;num_samples=2;samples=n/a,sample_essv9764283;num_samples_tested=791;frequency=0.25%;num_unique_samples_tested=791;nr_frequency=0.25%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1058906	1058985	.	.	.	ID=gssv354;Name=gssv354;variant_type=CNV;variant_sub_type=Loss;outer_start=1058898;inner_start=1058906;inner_end=1058985;outer_end=1058993;inner_rank=1;num_variants=2;variants=essv9764283,nssv178771;num_studies=2;studies=Mills2006,Boomsma2014;num_platforms=2;platforms=SangerSequencing,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,SplitRead;num_samples=2;samples=n/a,sample_essv9764283;num_samples_tested=791;frequency=0.25%;num_unique_samples_tested=791;nr_frequency=0.25%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1058993	1058993	.	.	.	ID=gssv354;Name=gssv354;variant_type=CNV;variant_sub_type=Loss;outer_start=1058898;inner_start=1058906;inner_end=1058985;outer_end=1058993;inner_rank=1;num_variants=2;variants=essv9764283,nssv178771;num_studies=2;studies=Mills2006,Boomsma2014;num_platforms=2;platforms=SangerSequencing,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,SplitRead;num_samples=2;samples=n/a,sample_essv9764283;num_samples_tested=791;frequency=0.25%;num_unique_samples_tested=791;nr_frequency=0.25%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1866297	1866297	.	.	.	ID=gssv386;Name=gssv386;variant_type=CNV;variant_sub_type=Loss;outer_start=1866297;inner_start=1866313;inner_end=1867098;outer_end=1867172;inner_rank=8;num_variants=3;variants=essv27862,essv29185,essv9756201;num_studies=3;studies=Wang2008,Boomsma2014,Ahn2009;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=3;samples=YH,sample_essv9756201,SJK;num_samples_tested=769;frequency=0.39%;num_unique_samples_tested=769;nr_frequency=0.39%;PopulationSummary=European 1:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1866313	1867098	.	.	.	ID=gssv386;Name=gssv386;variant_type=CNV;variant_sub_type=Loss;outer_start=1866297;inner_start=1866313;inner_end=1867098;outer_end=1867172;inner_rank=8;num_variants=3;variants=essv27862,essv29185,essv9756201;num_studies=3;studies=Wang2008,Boomsma2014,Ahn2009;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=3;samples=YH,sample_essv9756201,SJK;num_samples_tested=769;frequency=0.39%;num_unique_samples_tested=769;nr_frequency=0.39%;PopulationSummary=European 1:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1867172	1867172	.	.	.	ID=gssv386;Name=gssv386;variant_type=CNV;variant_sub_type=Loss;outer_start=1866297;inner_start=1866313;inner_end=1867098;outer_end=1867172;inner_rank=8;num_variants=3;variants=essv27862,essv29185,essv9756201;num_studies=3;studies=Wang2008,Boomsma2014,Ahn2009;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=3;samples=YH,sample_essv9756201,SJK;num_samples_tested=769;frequency=0.39%;num_unique_samples_tested=769;nr_frequency=0.39%;PopulationSummary=European 1:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1910371	1910371	.	.	.	ID=gssv392;Name=gssv392;variant_type=CNV;variant_sub_type=Loss;outer_start=1910371;inner_start=1910377;inner_end=1911377;outer_end=1911467;inner_rank=7;num_variants=5;variants=essv32985,essv48708,essv66908,essv79252,nssv708638;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=5;samples=sample_nssv708638,NA12749,NA07037,NA19147,NA12828;num_samples_tested=1540;frequency=0.32%;num_unique_samples_tested=1540;nr_frequency=0.32%;PopulationSummary=European 4:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1910377	1911377	.	.	.	ID=gssv392;Name=gssv392;variant_type=CNV;variant_sub_type=Loss;outer_start=1910371;inner_start=1910377;inner_end=1911377;outer_end=1911467;inner_rank=7;num_variants=5;variants=essv32985,essv48708,essv66908,essv79252,nssv708638;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=5;samples=sample_nssv708638,NA12749,NA07037,NA19147,NA12828;num_samples_tested=1540;frequency=0.32%;num_unique_samples_tested=1540;nr_frequency=0.32%;PopulationSummary=European 4:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1911467	1911467	.	.	.	ID=gssv392;Name=gssv392;variant_type=CNV;variant_sub_type=Loss;outer_start=1910371;inner_start=1910377;inner_end=1911377;outer_end=1911467;inner_rank=7;num_variants=5;variants=essv32985,essv48708,essv66908,essv79252,nssv708638;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=5;samples=sample_nssv708638,NA12749,NA07037,NA19147,NA12828;num_samples_tested=1540;frequency=0.32%;num_unique_samples_tested=1540;nr_frequency=0.32%;PopulationSummary=European 4:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1912935	1912935	.	.	.	ID=gssv393;Name=gssv393;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1912935;inner_start=1912935;inner_end=1913785;outer_end=1913930;inner_rank=7;num_variants=6;variants=essv37661,essv45016,essv3586225,essv42280,essv49885,essv83274;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=6;samples=NA19190,HuRef,NA18517,NA12489,NA18505,NA19257;num_samples_tested=41;frequency=14.63%;num_unique_samples_tested=41;nr_frequency=14.63%;PopulationSummary=European 2:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1912935	1913785	.	.	.	ID=gssv393;Name=gssv393;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1912935;inner_start=1912935;inner_end=1913785;outer_end=1913930;inner_rank=7;num_variants=6;variants=essv37661,essv45016,essv3586225,essv42280,essv49885,essv83274;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=6;samples=NA19190,HuRef,NA18517,NA12489,NA18505,NA19257;num_samples_tested=41;frequency=14.63%;num_unique_samples_tested=41;nr_frequency=14.63%;PopulationSummary=European 2:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1913930	1913930	.	.	.	ID=gssv393;Name=gssv393;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=1912935;inner_start=1912935;inner_end=1913785;outer_end=1913930;inner_rank=7;num_variants=6;variants=essv37661,essv45016,essv3586225,essv42280,essv49885,essv83274;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=6;samples=NA19190,HuRef,NA18517,NA12489,NA18505,NA19257;num_samples_tested=41;frequency=14.63%;num_unique_samples_tested=41;nr_frequency=14.63%;PopulationSummary=European 2:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	1922946	1922946	.	.	.	ID=gssv397;Name=gssv397;variant_type=CNV;variant_sub_type=Loss;outer_start=1922946;inner_start=1922955;inner_end=1924561;outer_end=1924578;inner_rank=8;num_variants=4;variants=essv9841576,essv9841577,essv9841578,nssv3005154;num_studies=2;studies=1000GenomesPhase3,Dogan2014;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,RD+PEM;num_samples=4;samples=HG03824,HG02330,BILGI_BIOE,NA20506;num_samples_tested=2505;frequency=0.16%;num_unique_samples_tested=2505;nr_frequency=0.15%;PopulationSummary=European 1:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1922955	1924561	.	.	.	ID=gssv397;Name=gssv397;variant_type=CNV;variant_sub_type=Loss;outer_start=1922946;inner_start=1922955;inner_end=1924561;outer_end=1924578;inner_rank=8;num_variants=4;variants=essv9841576,essv9841577,essv9841578,nssv3005154;num_studies=2;studies=1000GenomesPhase3,Dogan2014;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,RD+PEM;num_samples=4;samples=HG03824,HG02330,BILGI_BIOE,NA20506;num_samples_tested=2505;frequency=0.16%;num_unique_samples_tested=2505;nr_frequency=0.15%;PopulationSummary=European 1:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	1924578	1924578	.	.	.	ID=gssv397;Name=gssv397;variant_type=CNV;variant_sub_type=Loss;outer_start=1922946;inner_start=1922955;inner_end=1924561;outer_end=1924578;inner_rank=8;num_variants=4;variants=essv9841576,essv9841577,essv9841578,nssv3005154;num_studies=2;studies=1000GenomesPhase3,Dogan2014;num_platforms=2;platforms=Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,RD+PEM;num_samples=4;samples=HG03824,HG02330,BILGI_BIOE,NA20506;num_samples_tested=2505;frequency=0.16%;num_unique_samples_tested=2505;nr_frequency=0.15%;PopulationSummary=European 1:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	2024490	2024490	.	.	.	ID=gssv401;Name=gssv401;variant_type=CNV;variant_sub_type=Loss;outer_start=2024490;inner_start=2024493;inner_end=2027492;outer_end=2027497;inner_rank=7;num_variants=63;variants=essv5420709,essv5500049,essv5502714,essv5521064,essv5562511,essv5586775,essv5592270,essv5597900,essv5633795,essv5636927,essv5657047,essv5668953,essv5681468,essv5690079,essv5797826,essv5817670,essv5828436,essv5886970,essv5892031,essv5894647,essv5900192,essv5950655,essv6028858,essv6085392,essv6154406,essv6220938,essv6229381,essv6231552,essv6249120,essv6255118,essv6295269,essv6308201,essv6315088,essv6396289,essv6422341,essv6423410,essv6474764,essv6479850,essv6564858,essv6566834,essv6574210,essv65085,essv9841579,essv9841580,essv9841581,essv9841582,essv9841583,essv9841584,essv9841585,essv9841586,essv9841587,essv9841588,essv9841589,essv9841590,essv9841591,essv9841592,essv9841593,essv9841594,essv9841595,essv9841596,essv9841597,essv9841598,essv53778;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=57;samples=NA19676,NA18981,NA18520,NA18522,NA18523,NA19144,NA11831,NA12750,NA07051,HG03112,HG03370,HG03291,HG03172,HG02429,HG02974,HG02479,NA19240,NA18967,NA18516,NA19152,HG02852,NA19138,NA12763,NA19116,NA19159,HG03366,NA11919,HG03267,NA12717,NA19239,NA19238,NA07346,NA07347,NA19172,NA11992,NA11993,NA18871,NA19390,HG02854,NA18953,NA11829,NA12892,NA18508,HG03342,NA12004,NA18923,NA12751,NA18486,NA12044,HG03380,NA18972,NA18853,NA18976,HG03517,NA18974,NA18504,NA19107;num_samples_tested=3599;frequency=1.58%;num_unique_samples_tested=2565;nr_frequency=2.22%;PopulationSummary=European 15:Asian 6:Mexican 1:African 35:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2024493	2027492	.	.	.	ID=gssv401;Name=gssv401;variant_type=CNV;variant_sub_type=Loss;outer_start=2024490;inner_start=2024493;inner_end=2027492;outer_end=2027497;inner_rank=7;num_variants=63;variants=essv5420709,essv5500049,essv5502714,essv5521064,essv5562511,essv5586775,essv5592270,essv5597900,essv5633795,essv5636927,essv5657047,essv5668953,essv5681468,essv5690079,essv5797826,essv5817670,essv5828436,essv5886970,essv5892031,essv5894647,essv5900192,essv5950655,essv6028858,essv6085392,essv6154406,essv6220938,essv6229381,essv6231552,essv6249120,essv6255118,essv6295269,essv6308201,essv6315088,essv6396289,essv6422341,essv6423410,essv6474764,essv6479850,essv6564858,essv6566834,essv6574210,essv65085,essv9841579,essv9841580,essv9841581,essv9841582,essv9841583,essv9841584,essv9841585,essv9841586,essv9841587,essv9841588,essv9841589,essv9841590,essv9841591,essv9841592,essv9841593,essv9841594,essv9841595,essv9841596,essv9841597,essv9841598,essv53778;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=57;samples=NA19676,NA18981,NA18520,NA18522,NA18523,NA19144,NA11831,NA12750,NA07051,HG03112,HG03370,HG03291,HG03172,HG02429,HG02974,HG02479,NA19240,NA18967,NA18516,NA19152,HG02852,NA19138,NA12763,NA19116,NA19159,HG03366,NA11919,HG03267,NA12717,NA19239,NA19238,NA07346,NA07347,NA19172,NA11992,NA11993,NA18871,NA19390,HG02854,NA18953,NA11829,NA12892,NA18508,HG03342,NA12004,NA18923,NA12751,NA18486,NA12044,HG03380,NA18972,NA18853,NA18976,HG03517,NA18974,NA18504,NA19107;num_samples_tested=3599;frequency=1.58%;num_unique_samples_tested=2565;nr_frequency=2.22%;PopulationSummary=European 15:Asian 6:Mexican 1:African 35:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2027497	2027497	.	.	.	ID=gssv401;Name=gssv401;variant_type=CNV;variant_sub_type=Loss;outer_start=2024490;inner_start=2024493;inner_end=2027492;outer_end=2027497;inner_rank=7;num_variants=63;variants=essv5420709,essv5500049,essv5502714,essv5521064,essv5562511,essv5586775,essv5592270,essv5597900,essv5633795,essv5636927,essv5657047,essv5668953,essv5681468,essv5690079,essv5797826,essv5817670,essv5828436,essv5886970,essv5892031,essv5894647,essv5900192,essv5950655,essv6028858,essv6085392,essv6154406,essv6220938,essv6229381,essv6231552,essv6249120,essv6255118,essv6295269,essv6308201,essv6315088,essv6396289,essv6422341,essv6423410,essv6474764,essv6479850,essv6564858,essv6566834,essv6574210,essv65085,essv9841579,essv9841580,essv9841581,essv9841582,essv9841583,essv9841584,essv9841585,essv9841586,essv9841587,essv9841588,essv9841589,essv9841590,essv9841591,essv9841592,essv9841593,essv9841594,essv9841595,essv9841596,essv9841597,essv9841598,essv53778;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=57;samples=NA19676,NA18981,NA18520,NA18522,NA18523,NA19144,NA11831,NA12750,NA07051,HG03112,HG03370,HG03291,HG03172,HG02429,HG02974,HG02479,NA19240,NA18967,NA18516,NA19152,HG02852,NA19138,NA12763,NA19116,NA19159,HG03366,NA11919,HG03267,NA12717,NA19239,NA19238,NA07346,NA07347,NA19172,NA11992,NA11993,NA18871,NA19390,HG02854,NA18953,NA11829,NA12892,NA18508,HG03342,NA12004,NA18923,NA12751,NA18486,NA12044,HG03380,NA18972,NA18853,NA18976,HG03517,NA18974,NA18504,NA19107;num_samples_tested=3599;frequency=1.58%;num_unique_samples_tested=2565;nr_frequency=2.22%;PopulationSummary=European 15:Asian 6:Mexican 1:African 35:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2037656	2037656	.	.	.	ID=gssv403;Name=gssv403;variant_type=CNV;variant_sub_type=Loss;outer_start=2037656;inner_start=2037733;inner_end=2038228;outer_end=2038273;inner_rank=9;num_variants=3;variants=essv27200,essv4969560,essv4990169;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2037733	2038228	.	.	.	ID=gssv403;Name=gssv403;variant_type=CNV;variant_sub_type=Loss;outer_start=2037656;inner_start=2037733;inner_end=2038228;outer_end=2038273;inner_rank=9;num_variants=3;variants=essv27200,essv4969560,essv4990169;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2038273	2038273	.	.	.	ID=gssv403;Name=gssv403;variant_type=CNV;variant_sub_type=Loss;outer_start=2037656;inner_start=2037733;inner_end=2038228;outer_end=2038273;inner_rank=9;num_variants=3;variants=essv27200,essv4969560,essv4990169;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2052961	2052961	.	.	.	ID=gssv409;Name=gssv409;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2052961;inner_start=2053123;inner_end=2055766;outer_end=2056200;inner_rank=7;num_variants=34;variants=nssv1420402,nssv2997226,essv32290,essv82459,essv45323,essv71938,essv54090,essv66385,essv35922,essv5233482,essv38778,essv43794,essv49519,essv59580,essv67764,essv40301,essv47090,nssv708646,essv27282,essv39216,essv48190,essv52243,essv55134,essv64379,essv67378,essv75165,essv76728,nssv708642,nssv708643,nssv708644,nssv708645,nssv708653,essv3586410,nssv708641;num_studies=7;studies=Pang2010,Cooper2011,Ju2010,Conrad2009,McKernan2009,Wang2008,Dogan2014;num_platforms=5;platforms=SOLiD,Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=PEM,ReadDepth,Custom_HMM,GADA;num_samples=34;samples=NA10851,NA07037,YH,NA19225,NA18523,NA19147,NA18861,sample_nssv708653,NA18909,NA18907,NA12828,HuRef,NA18508,NA18517,NA18511,NA12878,NA19257,NA12287,NA19114,sample_nssv708645,sample_nssv708644,NA07045,sample_nssv708646,sample_nssv708641,sample_nssv708643,sample_nssv708642,BILGI_BIOE,NA19129,NA18858,NA12004,NA12006,NA18507,NA19099,NA19240;num_samples_tested=1545;frequency=2.2%;num_unique_samples_tested=1545;nr_frequency=2.2%;PopulationSummary=European 16:Asian 1:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	2053123	2055766	.	.	.	ID=gssv409;Name=gssv409;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2052961;inner_start=2053123;inner_end=2055766;outer_end=2056200;inner_rank=7;num_variants=34;variants=nssv1420402,nssv2997226,essv32290,essv82459,essv45323,essv71938,essv54090,essv66385,essv35922,essv5233482,essv38778,essv43794,essv49519,essv59580,essv67764,essv40301,essv47090,nssv708646,essv27282,essv39216,essv48190,essv52243,essv55134,essv64379,essv67378,essv75165,essv76728,nssv708642,nssv708643,nssv708644,nssv708645,nssv708653,essv3586410,nssv708641;num_studies=7;studies=Pang2010,Cooper2011,Ju2010,Conrad2009,McKernan2009,Wang2008,Dogan2014;num_platforms=5;platforms=SOLiD,Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=PEM,ReadDepth,Custom_HMM,GADA;num_samples=34;samples=NA10851,NA07037,YH,NA19225,NA18523,NA19147,NA18861,sample_nssv708653,NA18909,NA18907,NA12828,HuRef,NA18508,NA18517,NA18511,NA12878,NA19257,NA12287,NA19114,sample_nssv708645,sample_nssv708644,NA07045,sample_nssv708646,sample_nssv708641,sample_nssv708643,sample_nssv708642,BILGI_BIOE,NA19129,NA18858,NA12004,NA12006,NA18507,NA19099,NA19240;num_samples_tested=1545;frequency=2.2%;num_unique_samples_tested=1545;nr_frequency=2.2%;PopulationSummary=European 16:Asian 1:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	2056200	2056200	.	.	.	ID=gssv409;Name=gssv409;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2052961;inner_start=2053123;inner_end=2055766;outer_end=2056200;inner_rank=7;num_variants=34;variants=nssv1420402,nssv2997226,essv32290,essv82459,essv45323,essv71938,essv54090,essv66385,essv35922,essv5233482,essv38778,essv43794,essv49519,essv59580,essv67764,essv40301,essv47090,nssv708646,essv27282,essv39216,essv48190,essv52243,essv55134,essv64379,essv67378,essv75165,essv76728,nssv708642,nssv708643,nssv708644,nssv708645,nssv708653,essv3586410,nssv708641;num_studies=7;studies=Pang2010,Cooper2011,Ju2010,Conrad2009,McKernan2009,Wang2008,Dogan2014;num_platforms=5;platforms=SOLiD,Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=PEM,ReadDepth,Custom_HMM,GADA;num_samples=34;samples=NA10851,NA07037,YH,NA19225,NA18523,NA19147,NA18861,sample_nssv708653,NA18909,NA18907,NA12828,HuRef,NA18508,NA18517,NA18511,NA12878,NA19257,NA12287,NA19114,sample_nssv708645,sample_nssv708644,NA07045,sample_nssv708646,sample_nssv708641,sample_nssv708643,sample_nssv708642,BILGI_BIOE,NA19129,NA18858,NA12004,NA12006,NA18507,NA19099,NA19240;num_samples_tested=1545;frequency=2.2%;num_unique_samples_tested=1545;nr_frequency=2.2%;PopulationSummary=European 16:Asian 1:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	2053416	2053416	.	.	.	ID=gssv410;Name=gssv410;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2053416;inner_start=2053576;inner_end=2055560;outer_end=2055638;inner_rank=7;num_variants=79;variants=essv50820,essv78063,nssv708650,nssv708651,nssv708652,nssv708672,nssv708647,nssv708648,nssv708649,essv58106,nssv708659,nssv708660,nssv708661,nssv708662,nssv708663,nssv708664,nssv708665,nssv708666,nssv708667,nssv708668,nssv708669,nssv708670,nssv708671,nssv708715,nssv708716,nssv708717,nssv708718,nssv708719,nssv708720,nssv708721,nssv708722,essv44405,nssv708654,nssv708655,nssv708656,nssv708657,nssv708658,nssv708687,nssv708688,nssv708689,nssv708690,nssv708691,nssv708692,nssv708693,nssv708694,nssv708695,nssv708696,nssv708697,nssv708698,nssv708699,nssv708700,nssv708701,nssv708702,nssv708703,nssv708704,nssv708705,nssv708706,nssv708707,nssv708708,nssv708709,nssv708710,nssv708711,nssv708712,nssv708713,nssv708714,nssv708674,nssv708675,nssv708676,nssv708677,nssv708678,nssv708679,nssv708680,nssv708681,nssv708682,nssv708683,nssv708684,nssv708685,nssv708686,nssv708673;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=79;samples=sample_nssv708678,sample_nssv708719,sample_nssv708718,sample_nssv708717,sample_nssv708716,sample_nssv708715,sample_nssv708707,sample_nssv708713,sample_nssv708712,sample_nssv708711,sample_nssv708710,NA06985,sample_nssv708657,sample_nssv708654,sample_nssv708655,sample_nssv708652,sample_nssv708679,sample_nssv708650,sample_nssv708651,sample_nssv708674,sample_nssv708675,sample_nssv708676,sample_nssv708677,sample_nssv708670,sample_nssv708671,sample_nssv708672,sample_nssv708659,sample_nssv708684,sample_nssv708682,sample_nssv708649,sample_nssv708648,sample_nssv708692,sample_nssv708693,sample_nssv708690,sample_nssv708691,sample_nssv708696,sample_nssv708658,sample_nssv708694,sample_nssv708695,sample_nssv708698,sample_nssv708699,sample_nssv708697,NA11931,sample_nssv708714,sample_nssv708722,sample_nssv708720,sample_nssv708721,sample_nssv708673,sample_nssv708700,sample_nssv708701,sample_nssv708669,sample_nssv708668,sample_nssv708704,sample_nssv708705,sample_nssv708706,sample_nssv708688,sample_nssv708663,sample_nssv708662,sample_nssv708661,sample_nssv708660,sample_nssv708667,sample_nssv708666,sample_nssv708665,sample_nssv708664,sample_nssv708656,sample_nssv708702,sample_nssv708708,sample_nssv708647,sample_nssv708681,sample_nssv708680,sample_nssv708683,sample_nssv708703,sample_nssv708685,NA19108,sample_nssv708687,sample_nssv708686,sample_nssv708689,NA12489,sample_nssv708709;num_samples_tested=1540;frequency=5.13%;num_unique_samples_tested=1540;nr_frequency=5.12%;PopulationSummary=European 78:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2053576	2055560	.	.	.	ID=gssv410;Name=gssv410;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2053416;inner_start=2053576;inner_end=2055560;outer_end=2055638;inner_rank=7;num_variants=79;variants=essv50820,essv78063,nssv708650,nssv708651,nssv708652,nssv708672,nssv708647,nssv708648,nssv708649,essv58106,nssv708659,nssv708660,nssv708661,nssv708662,nssv708663,nssv708664,nssv708665,nssv708666,nssv708667,nssv708668,nssv708669,nssv708670,nssv708671,nssv708715,nssv708716,nssv708717,nssv708718,nssv708719,nssv708720,nssv708721,nssv708722,essv44405,nssv708654,nssv708655,nssv708656,nssv708657,nssv708658,nssv708687,nssv708688,nssv708689,nssv708690,nssv708691,nssv708692,nssv708693,nssv708694,nssv708695,nssv708696,nssv708697,nssv708698,nssv708699,nssv708700,nssv708701,nssv708702,nssv708703,nssv708704,nssv708705,nssv708706,nssv708707,nssv708708,nssv708709,nssv708710,nssv708711,nssv708712,nssv708713,nssv708714,nssv708674,nssv708675,nssv708676,nssv708677,nssv708678,nssv708679,nssv708680,nssv708681,nssv708682,nssv708683,nssv708684,nssv708685,nssv708686,nssv708673;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=79;samples=sample_nssv708678,sample_nssv708719,sample_nssv708718,sample_nssv708717,sample_nssv708716,sample_nssv708715,sample_nssv708707,sample_nssv708713,sample_nssv708712,sample_nssv708711,sample_nssv708710,NA06985,sample_nssv708657,sample_nssv708654,sample_nssv708655,sample_nssv708652,sample_nssv708679,sample_nssv708650,sample_nssv708651,sample_nssv708674,sample_nssv708675,sample_nssv708676,sample_nssv708677,sample_nssv708670,sample_nssv708671,sample_nssv708672,sample_nssv708659,sample_nssv708684,sample_nssv708682,sample_nssv708649,sample_nssv708648,sample_nssv708692,sample_nssv708693,sample_nssv708690,sample_nssv708691,sample_nssv708696,sample_nssv708658,sample_nssv708694,sample_nssv708695,sample_nssv708698,sample_nssv708699,sample_nssv708697,NA11931,sample_nssv708714,sample_nssv708722,sample_nssv708720,sample_nssv708721,sample_nssv708673,sample_nssv708700,sample_nssv708701,sample_nssv708669,sample_nssv708668,sample_nssv708704,sample_nssv708705,sample_nssv708706,sample_nssv708688,sample_nssv708663,sample_nssv708662,sample_nssv708661,sample_nssv708660,sample_nssv708667,sample_nssv708666,sample_nssv708665,sample_nssv708664,sample_nssv708656,sample_nssv708702,sample_nssv708708,sample_nssv708647,sample_nssv708681,sample_nssv708680,sample_nssv708683,sample_nssv708703,sample_nssv708685,NA19108,sample_nssv708687,sample_nssv708686,sample_nssv708689,NA12489,sample_nssv708709;num_samples_tested=1540;frequency=5.13%;num_unique_samples_tested=1540;nr_frequency=5.12%;PopulationSummary=European 78:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2055638	2055638	.	.	.	ID=gssv410;Name=gssv410;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2053416;inner_start=2053576;inner_end=2055560;outer_end=2055638;inner_rank=7;num_variants=79;variants=essv50820,essv78063,nssv708650,nssv708651,nssv708652,nssv708672,nssv708647,nssv708648,nssv708649,essv58106,nssv708659,nssv708660,nssv708661,nssv708662,nssv708663,nssv708664,nssv708665,nssv708666,nssv708667,nssv708668,nssv708669,nssv708670,nssv708671,nssv708715,nssv708716,nssv708717,nssv708718,nssv708719,nssv708720,nssv708721,nssv708722,essv44405,nssv708654,nssv708655,nssv708656,nssv708657,nssv708658,nssv708687,nssv708688,nssv708689,nssv708690,nssv708691,nssv708692,nssv708693,nssv708694,nssv708695,nssv708696,nssv708697,nssv708698,nssv708699,nssv708700,nssv708701,nssv708702,nssv708703,nssv708704,nssv708705,nssv708706,nssv708707,nssv708708,nssv708709,nssv708710,nssv708711,nssv708712,nssv708713,nssv708714,nssv708674,nssv708675,nssv708676,nssv708677,nssv708678,nssv708679,nssv708680,nssv708681,nssv708682,nssv708683,nssv708684,nssv708685,nssv708686,nssv708673;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=79;samples=sample_nssv708678,sample_nssv708719,sample_nssv708718,sample_nssv708717,sample_nssv708716,sample_nssv708715,sample_nssv708707,sample_nssv708713,sample_nssv708712,sample_nssv708711,sample_nssv708710,NA06985,sample_nssv708657,sample_nssv708654,sample_nssv708655,sample_nssv708652,sample_nssv708679,sample_nssv708650,sample_nssv708651,sample_nssv708674,sample_nssv708675,sample_nssv708676,sample_nssv708677,sample_nssv708670,sample_nssv708671,sample_nssv708672,sample_nssv708659,sample_nssv708684,sample_nssv708682,sample_nssv708649,sample_nssv708648,sample_nssv708692,sample_nssv708693,sample_nssv708690,sample_nssv708691,sample_nssv708696,sample_nssv708658,sample_nssv708694,sample_nssv708695,sample_nssv708698,sample_nssv708699,sample_nssv708697,NA11931,sample_nssv708714,sample_nssv708722,sample_nssv708720,sample_nssv708721,sample_nssv708673,sample_nssv708700,sample_nssv708701,sample_nssv708669,sample_nssv708668,sample_nssv708704,sample_nssv708705,sample_nssv708706,sample_nssv708688,sample_nssv708663,sample_nssv708662,sample_nssv708661,sample_nssv708660,sample_nssv708667,sample_nssv708666,sample_nssv708665,sample_nssv708664,sample_nssv708656,sample_nssv708702,sample_nssv708708,sample_nssv708647,sample_nssv708681,sample_nssv708680,sample_nssv708683,sample_nssv708703,sample_nssv708685,NA19108,sample_nssv708687,sample_nssv708686,sample_nssv708689,NA12489,sample_nssv708709;num_samples_tested=1540;frequency=5.13%;num_unique_samples_tested=1540;nr_frequency=5.12%;PopulationSummary=European 78:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2073716	2073716	.	.	.	ID=gssv413;Name=gssv413;variant_type=CNV;variant_sub_type=Loss;outer_start=2073716;inner_start=2073723;inner_end=2074000;outer_end=2074039;inner_rank=9;num_variants=2;variants=essv4884634,essv26735;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2073723	2074000	.	.	.	ID=gssv413;Name=gssv413;variant_type=CNV;variant_sub_type=Loss;outer_start=2073716;inner_start=2073723;inner_end=2074000;outer_end=2074039;inner_rank=9;num_variants=2;variants=essv4884634,essv26735;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2074039	2074039	.	.	.	ID=gssv413;Name=gssv413;variant_type=CNV;variant_sub_type=Loss;outer_start=2073716;inner_start=2073723;inner_end=2074000;outer_end=2074039;inner_rank=9;num_variants=2;variants=essv4884634,essv26735;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2694433	2694433	.	.	.	ID=gssv424;Name=gssv424;variant_type=CNV;variant_sub_type=Gain;outer_start=2694433;inner_start=2694475;inner_end=3202884;outer_end=3202884;inner_rank=13;num_variants=2;variants=nssv3696758,essv9783644;num_studies=2;studies=Uddin2014,WTCCC2(58C);num_platforms=2;platforms=CytoScanHD_2.7M,Affymetrix_6.0;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=2;samples=sample_nssv3696758,401842BJ;num_samples_tested=2373;frequency=0.08%;num_unique_samples_tested=2373;nr_frequency=0.08%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2694475	3202884	.	.	.	ID=gssv424;Name=gssv424;variant_type=CNV;variant_sub_type=Gain;outer_start=2694433;inner_start=2694475;inner_end=3202884;outer_end=3202884;inner_rank=13;num_variants=2;variants=nssv3696758,essv9783644;num_studies=2;studies=Uddin2014,WTCCC2(58C);num_platforms=2;platforms=CytoScanHD_2.7M,Affymetrix_6.0;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=2;samples=sample_nssv3696758,401842BJ;num_samples_tested=2373;frequency=0.08%;num_unique_samples_tested=2373;nr_frequency=0.08%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3202884	3202884	.	.	.	ID=gssv424;Name=gssv424;variant_type=CNV;variant_sub_type=Gain;outer_start=2694433;inner_start=2694475;inner_end=3202884;outer_end=3202884;inner_rank=13;num_variants=2;variants=nssv3696758,essv9783644;num_studies=2;studies=Uddin2014,WTCCC2(58C);num_platforms=2;platforms=CytoScanHD_2.7M,Affymetrix_6.0;num_algorithms=2;algorithms=ChAS,Custom_HMM;num_samples=2;samples=sample_nssv3696758,401842BJ;num_samples_tested=2373;frequency=0.08%;num_unique_samples_tested=2373;nr_frequency=0.08%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2395452	2395452	.	.	.	ID=gssv431;Name=gssv431;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2395452;inner_start=2404598;inner_end=2484663;outer_end=2485486;inner_rank=10;num_variants=2;variants=nssv708749,nssv1440793;num_studies=2;studies=Park2010,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,Agilent24M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=2;samples=NA18969,sample_nssv708749;num_samples_tested=1530;frequency=0.13%;num_unique_samples_tested=1530;nr_frequency=0.13%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2404598	2484663	.	.	.	ID=gssv431;Name=gssv431;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2395452;inner_start=2404598;inner_end=2484663;outer_end=2485486;inner_rank=10;num_variants=2;variants=nssv708749,nssv1440793;num_studies=2;studies=Park2010,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,Agilent24M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=2;samples=NA18969,sample_nssv708749;num_samples_tested=1530;frequency=0.13%;num_unique_samples_tested=1530;nr_frequency=0.13%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2485486	2485486	.	.	.	ID=gssv431;Name=gssv431;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2395452;inner_start=2404598;inner_end=2484663;outer_end=2485486;inner_rank=10;num_variants=2;variants=nssv708749,nssv1440793;num_studies=2;studies=Park2010,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,Agilent24M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=2;samples=NA18969,sample_nssv708749;num_samples_tested=1530;frequency=0.13%;num_unique_samples_tested=1530;nr_frequency=0.13%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2619888	2619888	.	.	.	ID=gssv434;Name=gssv434;variant_type=CNV;variant_sub_type=Loss;outer_start=2619888;inner_start=2626100;inner_end=2695617;outer_end=2701630;inner_rank=8;num_variants=2;variants=essv9783533,essv9760062;num_studies=2;studies=Uddin2014,Boomsma2014;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_HiSeq;num_algorithms=2;algorithms=ChAS,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=sample_essv9760062,400650RM;num_samples_tested=1640;frequency=0.12%;num_unique_samples_tested=1640;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2626100	2695617	.	.	.	ID=gssv434;Name=gssv434;variant_type=CNV;variant_sub_type=Loss;outer_start=2619888;inner_start=2626100;inner_end=2695617;outer_end=2701630;inner_rank=8;num_variants=2;variants=essv9783533,essv9760062;num_studies=2;studies=Uddin2014,Boomsma2014;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_HiSeq;num_algorithms=2;algorithms=ChAS,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=sample_essv9760062,400650RM;num_samples_tested=1640;frequency=0.12%;num_unique_samples_tested=1640;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2701630	2701630	.	.	.	ID=gssv434;Name=gssv434;variant_type=CNV;variant_sub_type=Loss;outer_start=2619888;inner_start=2626100;inner_end=2695617;outer_end=2701630;inner_rank=8;num_variants=2;variants=essv9783533,essv9760062;num_studies=2;studies=Uddin2014,Boomsma2014;num_platforms=2;platforms=CytoScanHD_2.7M,Illumina_HiSeq;num_algorithms=2;algorithms=ChAS,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=sample_essv9760062,400650RM;num_samples_tested=1640;frequency=0.12%;num_unique_samples_tested=1640;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2566259	2566259	.	.	.	ID=gssv436;Name=gssv436;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2566259;inner_start=2580501;inner_end=2633653;outer_end=2634182;inner_rank=7;num_variants=14;variants=essv47280,essv43577,essv53641,essv44606,essv68066,essv49750,essv35932,nssv1420513,essv34942,essv72764,essv82638,essv62441,essv52698,essv57050;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=14;samples=NA18858,NA10851,NA19190,NA18909,NA18907,NA15510,NA12006,NA18502,NA11993,NA18517,NA12489,NA19225,NA18861,NA18508;num_samples_tested=41;frequency=34.15%;num_unique_samples_tested=41;nr_frequency=34.14%;PopulationSummary=European 4:Asian 0:Mexican 0:African 9:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2580501	2633653	.	.	.	ID=gssv436;Name=gssv436;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2566259;inner_start=2580501;inner_end=2633653;outer_end=2634182;inner_rank=7;num_variants=14;variants=essv47280,essv43577,essv53641,essv44606,essv68066,essv49750,essv35932,nssv1420513,essv34942,essv72764,essv82638,essv62441,essv52698,essv57050;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=14;samples=NA18858,NA10851,NA19190,NA18909,NA18907,NA15510,NA12006,NA18502,NA11993,NA18517,NA12489,NA19225,NA18861,NA18508;num_samples_tested=41;frequency=34.15%;num_unique_samples_tested=41;nr_frequency=34.14%;PopulationSummary=European 4:Asian 0:Mexican 0:African 9:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2634182	2634182	.	.	.	ID=gssv436;Name=gssv436;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2566259;inner_start=2580501;inner_end=2633653;outer_end=2634182;inner_rank=7;num_variants=14;variants=essv47280,essv43577,essv53641,essv44606,essv68066,essv49750,essv35932,nssv1420513,essv34942,essv72764,essv82638,essv62441,essv52698,essv57050;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=14;samples=NA18858,NA10851,NA19190,NA18909,NA18907,NA15510,NA12006,NA18502,NA11993,NA18517,NA12489,NA19225,NA18861,NA18508;num_samples_tested=41;frequency=34.15%;num_unique_samples_tested=41;nr_frequency=34.14%;PopulationSummary=European 4:Asian 0:Mexican 0:African 9:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2580072	2580072	.	.	.	ID=gssv446;Name=gssv446;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2580072;inner_start=2584548;inner_end=2630102;outer_end=2634182;inner_rank=7;num_variants=9;variants=essv58422,essv60000,essv9759951,essv54557,essv31065,nssv708756,nssv708758,nssv708755,nssv708757;num_studies=4;studies=Boomsma2014,Cooper2011,Ahn2009,Conrad2009;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA,Custom_HMM;num_samples=9;samples=SJK,NA18523,sample_essv9759951,sample_nssv708758,NA19108,NA19099,sample_nssv708757,sample_nssv708756,sample_nssv708755;num_samples_tested=2308;frequency=0.39%;num_unique_samples_tested=2308;nr_frequency=0.38%;PopulationSummary=European 5:Asian 1:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2584548	2630102	.	.	.	ID=gssv446;Name=gssv446;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2580072;inner_start=2584548;inner_end=2630102;outer_end=2634182;inner_rank=7;num_variants=9;variants=essv58422,essv60000,essv9759951,essv54557,essv31065,nssv708756,nssv708758,nssv708755,nssv708757;num_studies=4;studies=Boomsma2014,Cooper2011,Ahn2009,Conrad2009;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA,Custom_HMM;num_samples=9;samples=SJK,NA18523,sample_essv9759951,sample_nssv708758,NA19108,NA19099,sample_nssv708757,sample_nssv708756,sample_nssv708755;num_samples_tested=2308;frequency=0.39%;num_unique_samples_tested=2308;nr_frequency=0.38%;PopulationSummary=European 5:Asian 1:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2634182	2634182	.	.	.	ID=gssv446;Name=gssv446;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2580072;inner_start=2584548;inner_end=2630102;outer_end=2634182;inner_rank=7;num_variants=9;variants=essv58422,essv60000,essv9759951,essv54557,essv31065,nssv708756,nssv708758,nssv708755,nssv708757;num_studies=4;studies=Boomsma2014,Cooper2011,Ahn2009,Conrad2009;num_platforms=4;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA,Custom_HMM;num_samples=9;samples=SJK,NA18523,sample_essv9759951,sample_nssv708758,NA19108,NA19099,sample_nssv708757,sample_nssv708756,sample_nssv708755;num_samples_tested=2308;frequency=0.39%;num_unique_samples_tested=2308;nr_frequency=0.38%;PopulationSummary=European 5:Asian 1:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2585158	2585158	.	.	.	ID=gssv454;Name=gssv454;variant_type=CNV;variant_sub_type=Loss;outer_start=2585158;inner_start=2588015;inner_end=2615858;outer_end=2620284;inner_rank=7;num_variants=7;variants=essv9759840,nssv708754,essv5918081,essv40122,essv79704,essv73556,essv76309;num_studies=4;studies=Cooper2011,Conrad2009,Boomsma2014,1000GenomesPhase1;num_platforms=4;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=Custom_HMM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA;num_samples=7;samples=NA12156,NA12414,NA12749,sample_essv9759840,NA18943,NA12878,sample_nssv708754;num_samples_tested=3362;frequency=0.21%;num_unique_samples_tested=3325;nr_frequency=0.21%;PopulationSummary=European 6:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2588015	2615858	.	.	.	ID=gssv454;Name=gssv454;variant_type=CNV;variant_sub_type=Loss;outer_start=2585158;inner_start=2588015;inner_end=2615858;outer_end=2620284;inner_rank=7;num_variants=7;variants=essv9759840,nssv708754,essv5918081,essv40122,essv79704,essv73556,essv76309;num_studies=4;studies=Cooper2011,Conrad2009,Boomsma2014,1000GenomesPhase1;num_platforms=4;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=Custom_HMM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA;num_samples=7;samples=NA12156,NA12414,NA12749,sample_essv9759840,NA18943,NA12878,sample_nssv708754;num_samples_tested=3362;frequency=0.21%;num_unique_samples_tested=3325;nr_frequency=0.21%;PopulationSummary=European 6:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2620284	2620284	.	.	.	ID=gssv454;Name=gssv454;variant_type=CNV;variant_sub_type=Loss;outer_start=2585158;inner_start=2588015;inner_end=2615858;outer_end=2620284;inner_rank=7;num_variants=7;variants=essv9759840,nssv708754,essv5918081,essv40122,essv79704,essv73556,essv76309;num_studies=4;studies=Cooper2011,Conrad2009,Boomsma2014,1000GenomesPhase1;num_platforms=4;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq;num_algorithms=4;algorithms=Custom_HMM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA;num_samples=7;samples=NA12156,NA12414,NA12749,sample_essv9759840,NA18943,NA12878,sample_nssv708754;num_samples_tested=3362;frequency=0.21%;num_unique_samples_tested=3325;nr_frequency=0.21%;PopulationSummary=European 6:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2586186	2586186	.	.	.	ID=gssv461;Name=gssv461;variant_type=CNV;variant_sub_type=Loss;outer_start=2586186;inner_start=2590177;inner_end=2614637;outer_end=2615507;inner_rank=7;num_variants=9;variants=essv62091,essv5415735,essv5642204,essv5813507,essv6321462,essv6420112,essv6514647,essv5832959,essv4845344;num_studies=3;studies=Bentley2008,1000GenomesPhase1,Conrad2009;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Illumina_GA;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GADA;num_samples=9;samples=NA19756,NA19780,NA18982,HG00635,NA12399,HG01516,NA12239,NA18507,NA19085;num_samples_tested=1096;frequency=0.82%;num_unique_samples_tested=1058;nr_frequency=0.85%;PopulationSummary=European 3:Asian 3:Mexican 2:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2590177	2614637	.	.	.	ID=gssv461;Name=gssv461;variant_type=CNV;variant_sub_type=Loss;outer_start=2586186;inner_start=2590177;inner_end=2614637;outer_end=2615507;inner_rank=7;num_variants=9;variants=essv62091,essv5415735,essv5642204,essv5813507,essv6321462,essv6420112,essv6514647,essv5832959,essv4845344;num_studies=3;studies=Bentley2008,1000GenomesPhase1,Conrad2009;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Illumina_GA;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GADA;num_samples=9;samples=NA19756,NA19780,NA18982,HG00635,NA12399,HG01516,NA12239,NA18507,NA19085;num_samples_tested=1096;frequency=0.82%;num_unique_samples_tested=1058;nr_frequency=0.85%;PopulationSummary=European 3:Asian 3:Mexican 2:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2615507	2615507	.	.	.	ID=gssv461;Name=gssv461;variant_type=CNV;variant_sub_type=Loss;outer_start=2586186;inner_start=2590177;inner_end=2614637;outer_end=2615507;inner_rank=7;num_variants=9;variants=essv62091,essv5415735,essv5642204,essv5813507,essv6321462,essv6420112,essv6514647,essv5832959,essv4845344;num_studies=3;studies=Bentley2008,1000GenomesPhase1,Conrad2009;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Illumina_GA;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GADA;num_samples=9;samples=NA19756,NA19780,NA18982,HG00635,NA12399,HG01516,NA12239,NA18507,NA19085;num_samples_tested=1096;frequency=0.82%;num_unique_samples_tested=1058;nr_frequency=0.85%;PopulationSummary=European 3:Asian 3:Mexican 2:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2614568	2614568	.	.	.	ID=gssv464;Name=gssv464;variant_type=CNV;variant_sub_type=Gain;outer_start=2614568;inner_start=2614838;inner_end=2632326;outer_end=2634182;inner_rank=7;num_variants=8;variants=essv39186,essv48561,nssv708760,essv73531,essv74919,essv67354,essv78146,essv79202;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=8;samples=NA12156,NA07037,NA12828,NA06985,NA12749,sample_nssv708760,NA12287,NA12004;num_samples_tested=1540;frequency=0.52%;num_unique_samples_tested=1540;nr_frequency=0.51%;PopulationSummary=European 8:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2614838	2632326	.	.	.	ID=gssv464;Name=gssv464;variant_type=CNV;variant_sub_type=Gain;outer_start=2614568;inner_start=2614838;inner_end=2632326;outer_end=2634182;inner_rank=7;num_variants=8;variants=essv39186,essv48561,nssv708760,essv73531,essv74919,essv67354,essv78146,essv79202;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=8;samples=NA12156,NA07037,NA12828,NA06985,NA12749,sample_nssv708760,NA12287,NA12004;num_samples_tested=1540;frequency=0.52%;num_unique_samples_tested=1540;nr_frequency=0.51%;PopulationSummary=European 8:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2634182	2634182	.	.	.	ID=gssv464;Name=gssv464;variant_type=CNV;variant_sub_type=Gain;outer_start=2614568;inner_start=2614838;inner_end=2632326;outer_end=2634182;inner_rank=7;num_variants=8;variants=essv39186,essv48561,nssv708760,essv73531,essv74919,essv67354,essv78146,essv79202;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=8;samples=NA12156,NA07037,NA12828,NA06985,NA12749,sample_nssv708760,NA12287,NA12004;num_samples_tested=1540;frequency=0.52%;num_unique_samples_tested=1540;nr_frequency=0.51%;PopulationSummary=European 8:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2302911	2302911	.	.	.	ID=gssv470;Name=gssv470;variant_type=CNV;variant_sub_type=Loss;outer_start=2302911;inner_start=2303675;inner_end=2320380;outer_end=2320640;inner_rank=8;num_variants=6;variants=essv9783311,essv9841602,essv9841603,essv9841604,essv9841605,essv9841606;num_studies=2;studies=Uddin2014,1000GenomesPhase3;num_platforms=2;platforms=CytoScanHD_2.7M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=ChAS,RD+PEM;num_samples=6;samples=NA20853,NA21124,NA20876,NA21094,NA20911,401011PJ;num_samples_tested=3377;frequency=0.18%;num_unique_samples_tested=3377;nr_frequency=0.17%;PopulationSummary=European 0:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 5:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2303675	2320380	.	.	.	ID=gssv470;Name=gssv470;variant_type=CNV;variant_sub_type=Loss;outer_start=2302911;inner_start=2303675;inner_end=2320380;outer_end=2320640;inner_rank=8;num_variants=6;variants=essv9783311,essv9841602,essv9841603,essv9841604,essv9841605,essv9841606;num_studies=2;studies=Uddin2014,1000GenomesPhase3;num_platforms=2;platforms=CytoScanHD_2.7M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=ChAS,RD+PEM;num_samples=6;samples=NA20853,NA21124,NA20876,NA21094,NA20911,401011PJ;num_samples_tested=3377;frequency=0.18%;num_unique_samples_tested=3377;nr_frequency=0.17%;PopulationSummary=European 0:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 5:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2320640	2320640	.	.	.	ID=gssv470;Name=gssv470;variant_type=CNV;variant_sub_type=Loss;outer_start=2302911;inner_start=2303675;inner_end=2320380;outer_end=2320640;inner_rank=8;num_variants=6;variants=essv9783311,essv9841602,essv9841603,essv9841604,essv9841605,essv9841606;num_studies=2;studies=Uddin2014,1000GenomesPhase3;num_platforms=2;platforms=CytoScanHD_2.7M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=ChAS,RD+PEM;num_samples=6;samples=NA20853,NA21124,NA20876,NA21094,NA20911,401011PJ;num_samples_tested=3377;frequency=0.18%;num_unique_samples_tested=3377;nr_frequency=0.17%;PopulationSummary=European 0:Asian 0:Mexican 0:African 0:Admixed 1:MiddleEast 0:NativeAmerican 5:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2614692	2614692	.	.	.	ID=gssv474;Name=gssv474;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2614692;inner_start=2614692;inner_end=2628277;outer_end=2629031;inner_rank=7;num_variants=2;variants=essv64439,essv29402;num_studies=2;studies=Ahn2009,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=2;samples=SJK,NA07045;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2614692	2628277	.	.	.	ID=gssv474;Name=gssv474;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2614692;inner_start=2614692;inner_end=2628277;outer_end=2629031;inner_rank=7;num_variants=2;variants=essv64439,essv29402;num_studies=2;studies=Ahn2009,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=2;samples=SJK,NA07045;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2629031	2629031	.	.	.	ID=gssv474;Name=gssv474;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2614692;inner_start=2614692;inner_end=2628277;outer_end=2629031;inner_rank=7;num_variants=2;variants=essv64439,essv29402;num_studies=2;studies=Ahn2009,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=2;samples=SJK,NA07045;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2684255	2684255	.	.	.	ID=gssv480;Name=gssv480;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2684255;inner_start=2684255;inner_end=2694246;outer_end=2695595;inner_rank=7;num_variants=10;variants=essv34469,nssv1420624,essv44540,essv47528,essv68175,essv54749,essv66303,essv35871,essv49528,essv48368;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=10;samples=NA18858,NA10851,NA07037,NA18907,NA18502,NA18517,NA12489,NA19099,NA18861,NA19240;num_samples_tested=41;frequency=24.39%;num_unique_samples_tested=41;nr_frequency=24.39%;PopulationSummary=European 3:Asian 0:Mexican 0:African 7:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2684255	2694246	.	.	.	ID=gssv480;Name=gssv480;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2684255;inner_start=2684255;inner_end=2694246;outer_end=2695595;inner_rank=7;num_variants=10;variants=essv34469,nssv1420624,essv44540,essv47528,essv68175,essv54749,essv66303,essv35871,essv49528,essv48368;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=10;samples=NA18858,NA10851,NA07037,NA18907,NA18502,NA18517,NA12489,NA19099,NA18861,NA19240;num_samples_tested=41;frequency=24.39%;num_unique_samples_tested=41;nr_frequency=24.39%;PopulationSummary=European 3:Asian 0:Mexican 0:African 7:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2695595	2695595	.	.	.	ID=gssv480;Name=gssv480;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2684255;inner_start=2684255;inner_end=2694246;outer_end=2695595;inner_rank=7;num_variants=10;variants=essv34469,nssv1420624,essv44540,essv47528,essv68175,essv54749,essv66303,essv35871,essv49528,essv48368;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=10;samples=NA18858,NA10851,NA07037,NA18907,NA18502,NA18517,NA12489,NA19099,NA18861,NA19240;num_samples_tested=41;frequency=24.39%;num_unique_samples_tested=41;nr_frequency=24.39%;PopulationSummary=European 3:Asian 0:Mexican 0:African 7:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4392511	4392511	.	.	.	ID=gssv481;Name=gssv481;variant_type=CNV;variant_sub_type=Gain;outer_start=4392511;inner_start=4392800;inner_end=4403828;outer_end=4404190;inner_rank=7;num_variants=4;variants=nssv708919,nssv708918,nssv708917,essv47331;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=NA18861,sample_nssv708917,sample_nssv708919,sample_nssv708918;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4392800	4403828	.	.	.	ID=gssv481;Name=gssv481;variant_type=CNV;variant_sub_type=Gain;outer_start=4392511;inner_start=4392800;inner_end=4403828;outer_end=4404190;inner_rank=7;num_variants=4;variants=nssv708919,nssv708918,nssv708917,essv47331;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=NA18861,sample_nssv708917,sample_nssv708919,sample_nssv708918;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4404190	4404190	.	.	.	ID=gssv481;Name=gssv481;variant_type=CNV;variant_sub_type=Gain;outer_start=4392511;inner_start=4392800;inner_end=4403828;outer_end=4404190;inner_rank=7;num_variants=4;variants=nssv708919,nssv708918,nssv708917,essv47331;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=NA18861,sample_nssv708917,sample_nssv708919,sample_nssv708918;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2684255	2684255	.	.	.	ID=gssv485;Name=gssv485;variant_type=CNV;variant_sub_type=Gain;outer_start=2684255;inner_start=2684255;inner_end=2691523;outer_end=2692165;inner_rank=7;num_variants=5;variants=essv53318,essv83495,essv72776,nssv708762,essv43915;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=5;samples=NA19225,NA18508,sample_nssv708762,NA19190,NA18909;num_samples_tested=1540;frequency=0.32%;num_unique_samples_tested=1540;nr_frequency=0.32%;PopulationSummary=European 1:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2684255	2691523	.	.	.	ID=gssv485;Name=gssv485;variant_type=CNV;variant_sub_type=Gain;outer_start=2684255;inner_start=2684255;inner_end=2691523;outer_end=2692165;inner_rank=7;num_variants=5;variants=essv53318,essv83495,essv72776,nssv708762,essv43915;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=5;samples=NA19225,NA18508,sample_nssv708762,NA19190,NA18909;num_samples_tested=1540;frequency=0.32%;num_unique_samples_tested=1540;nr_frequency=0.32%;PopulationSummary=European 1:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2692165	2692165	.	.	.	ID=gssv485;Name=gssv485;variant_type=CNV;variant_sub_type=Gain;outer_start=2684255;inner_start=2684255;inner_end=2691523;outer_end=2692165;inner_rank=7;num_variants=5;variants=essv53318,essv83495,essv72776,nssv708762,essv43915;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=5;samples=NA19225,NA18508,sample_nssv708762,NA19190,NA18909;num_samples_tested=1540;frequency=0.32%;num_unique_samples_tested=1540;nr_frequency=0.32%;PopulationSummary=European 1:Asian 0:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2583501	2583501	.	.	.	ID=gssv503;Name=gssv503;variant_type=CNV;variant_sub_type=Gain;outer_start=2583501;inner_start=2583647;inner_end=2588347;outer_end=2588347;inner_rank=7;num_variants=2;variants=essv79049,nssv2997303;num_studies=2;studies=Conrad2009,Dogan2014;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=2;samples=BILGI_BIOE,NA12749;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	2583647	2588347	.	.	.	ID=gssv503;Name=gssv503;variant_type=CNV;variant_sub_type=Gain;outer_start=2583501;inner_start=2583647;inner_end=2588347;outer_end=2588347;inner_rank=7;num_variants=2;variants=essv79049,nssv2997303;num_studies=2;studies=Conrad2009,Dogan2014;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=2;samples=BILGI_BIOE,NA12749;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	2588347	2588347	.	.	.	ID=gssv503;Name=gssv503;variant_type=CNV;variant_sub_type=Gain;outer_start=2583501;inner_start=2583647;inner_end=2588347;outer_end=2588347;inner_rank=7;num_variants=2;variants=essv79049,nssv2997303;num_studies=2;studies=Conrad2009,Dogan2014;num_platforms=2;platforms=NimbleGen42M,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=2;samples=BILGI_BIOE,NA12749;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	4123545	4123545	.	.	.	ID=gssv507;Name=gssv507;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4123545;inner_start=4123836;inner_end=4127988;outer_end=4128523;inner_rank=7;num_variants=10;variants=nssv708851,essv5398297,essv6405492,essv6417603,essv6498795,essv59365,essv79787,nssv708849,essv40205,nssv708850;num_studies=3;studies=1000GenomesPhase1,Conrad2009,Cooper2011;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM,GADA;num_samples=10;samples=HG01519,sample_nssv708850,sample_nssv708851,sample_nssv708849,NA12749,HG01516,HG01515,HG01522,NA19108,NA12878;num_samples_tested=2595;frequency=0.39%;num_unique_samples_tested=2558;nr_frequency=0.39%;PopulationSummary=European 9:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4123836	4127988	.	.	.	ID=gssv507;Name=gssv507;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4123545;inner_start=4123836;inner_end=4127988;outer_end=4128523;inner_rank=7;num_variants=10;variants=nssv708851,essv5398297,essv6405492,essv6417603,essv6498795,essv59365,essv79787,nssv708849,essv40205,nssv708850;num_studies=3;studies=1000GenomesPhase1,Conrad2009,Cooper2011;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM,GADA;num_samples=10;samples=HG01519,sample_nssv708850,sample_nssv708851,sample_nssv708849,NA12749,HG01516,HG01515,HG01522,NA19108,NA12878;num_samples_tested=2595;frequency=0.39%;num_unique_samples_tested=2558;nr_frequency=0.39%;PopulationSummary=European 9:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4128523	4128523	.	.	.	ID=gssv507;Name=gssv507;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4123545;inner_start=4123836;inner_end=4127988;outer_end=4128523;inner_rank=7;num_variants=10;variants=nssv708851,essv5398297,essv6405492,essv6417603,essv6498795,essv59365,essv79787,nssv708849,essv40205,nssv708850;num_studies=3;studies=1000GenomesPhase1,Conrad2009,Cooper2011;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM,GADA;num_samples=10;samples=HG01519,sample_nssv708850,sample_nssv708851,sample_nssv708849,NA12749,HG01516,HG01515,HG01522,NA19108,NA12878;num_samples_tested=2595;frequency=0.39%;num_unique_samples_tested=2558;nr_frequency=0.39%;PopulationSummary=European 9:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4392511	4392511	.	.	.	ID=gssv517;Name=gssv517;variant_type=CNV;variant_sub_type=Loss;outer_start=4392511;inner_start=4392511;inner_end=4395379;outer_end=4395812;inner_rank=14;num_variants=4;variants=nssv626587,nssv708914,nssv708915,nssv708916;num_studies=2;studies=Arlt2010,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,IlluminaOmni1-Quad;num_algorithms=2;algorithms=VAMP,Custom_HMM;num_samples=4;samples=sample_nssv708915,sample_nssv708914,HGMDFN090,sample_nssv708916;num_samples_tested=1501;frequency=0.27%;num_unique_samples_tested=1501;nr_frequency=0.26%;PopulationSummary=European 4:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4392511	4395379	.	.	.	ID=gssv517;Name=gssv517;variant_type=CNV;variant_sub_type=Loss;outer_start=4392511;inner_start=4392511;inner_end=4395379;outer_end=4395812;inner_rank=14;num_variants=4;variants=nssv626587,nssv708914,nssv708915,nssv708916;num_studies=2;studies=Arlt2010,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,IlluminaOmni1-Quad;num_algorithms=2;algorithms=VAMP,Custom_HMM;num_samples=4;samples=sample_nssv708915,sample_nssv708914,HGMDFN090,sample_nssv708916;num_samples_tested=1501;frequency=0.27%;num_unique_samples_tested=1501;nr_frequency=0.26%;PopulationSummary=European 4:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4395812	4395812	.	.	.	ID=gssv517;Name=gssv517;variant_type=CNV;variant_sub_type=Loss;outer_start=4392511;inner_start=4392511;inner_end=4395379;outer_end=4395812;inner_rank=14;num_variants=4;variants=nssv626587,nssv708914,nssv708915,nssv708916;num_studies=2;studies=Arlt2010,Cooper2011;num_platforms=2;platforms=Custom_Illumina_1.2M,IlluminaOmni1-Quad;num_algorithms=2;algorithms=VAMP,Custom_HMM;num_samples=4;samples=sample_nssv708915,sample_nssv708914,HGMDFN090,sample_nssv708916;num_samples_tested=1501;frequency=0.27%;num_unique_samples_tested=1501;nr_frequency=0.26%;PopulationSummary=European 4:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3209922	3209922	.	.	.	ID=gssv528;Name=gssv528;variant_type=CNV;variant_sub_type=Loss;outer_start=3209922;inner_start=3209942;inner_end=3212156;outer_end=3212186;inner_rank=8;num_variants=8;variants=essv9841971,essv9841972,essv6215077,essv6317073,essv6330380,essv6405701,essv6423827,essv6527111;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=6;samples=NA18552,NA19003,HG00592,HG00427,HG00581,HG00418;num_samples_tested=3559;frequency=0.17%;num_unique_samples_tested=2562;nr_frequency=0.23%;PopulationSummary=European 0:Asian 6:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3209942	3212156	.	.	.	ID=gssv528;Name=gssv528;variant_type=CNV;variant_sub_type=Loss;outer_start=3209922;inner_start=3209942;inner_end=3212156;outer_end=3212186;inner_rank=8;num_variants=8;variants=essv9841971,essv9841972,essv6215077,essv6317073,essv6330380,essv6405701,essv6423827,essv6527111;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=6;samples=NA18552,NA19003,HG00592,HG00427,HG00581,HG00418;num_samples_tested=3559;frequency=0.17%;num_unique_samples_tested=2562;nr_frequency=0.23%;PopulationSummary=European 0:Asian 6:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3212186	3212186	.	.	.	ID=gssv528;Name=gssv528;variant_type=CNV;variant_sub_type=Loss;outer_start=3209922;inner_start=3209942;inner_end=3212156;outer_end=3212186;inner_rank=8;num_variants=8;variants=essv9841971,essv9841972,essv6215077,essv6317073,essv6330380,essv6405701,essv6423827,essv6527111;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=6;samples=NA18552,NA19003,HG00592,HG00427,HG00581,HG00418;num_samples_tested=3559;frequency=0.17%;num_unique_samples_tested=2562;nr_frequency=0.23%;PopulationSummary=European 0:Asian 6:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3215213	3215213	.	.	.	ID=gssv533;Name=gssv533;variant_type=CNV;variant_sub_type=Loss;outer_start=3215213;inner_start=3215472;inner_end=3217387;outer_end=3217688;inner_rank=7;num_variants=4;variants=essv5311128,nssv626311,essv34614,essv76497;num_studies=3;studies=Arlt2010,McKernan2009,Conrad2009;num_platforms=3;platforms=SOLiD,Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=4;samples=NA18502,HGMDFN090,NA18511,NA18507;num_samples_tested=42;frequency=9.52%;num_unique_samples_tested=42;nr_frequency=9.52%;PopulationSummary=European 1:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3215472	3217387	.	.	.	ID=gssv533;Name=gssv533;variant_type=CNV;variant_sub_type=Loss;outer_start=3215213;inner_start=3215472;inner_end=3217387;outer_end=3217688;inner_rank=7;num_variants=4;variants=essv5311128,nssv626311,essv34614,essv76497;num_studies=3;studies=Arlt2010,McKernan2009,Conrad2009;num_platforms=3;platforms=SOLiD,Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=4;samples=NA18502,HGMDFN090,NA18511,NA18507;num_samples_tested=42;frequency=9.52%;num_unique_samples_tested=42;nr_frequency=9.52%;PopulationSummary=European 1:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3217688	3217688	.	.	.	ID=gssv533;Name=gssv533;variant_type=CNV;variant_sub_type=Loss;outer_start=3215213;inner_start=3215472;inner_end=3217387;outer_end=3217688;inner_rank=7;num_variants=4;variants=essv5311128,nssv626311,essv34614,essv76497;num_studies=3;studies=Arlt2010,McKernan2009,Conrad2009;num_platforms=3;platforms=SOLiD,Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=4;samples=NA18502,HGMDFN090,NA18511,NA18507;num_samples_tested=42;frequency=9.52%;num_unique_samples_tested=42;nr_frequency=9.52%;PopulationSummary=European 1:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2892794	2892794	.	.	.	ID=gssv534;Name=gssv534;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2892794;inner_start=2892824;inner_end=2894699;outer_end=2894919;inner_rank=7;num_variants=4;variants=essv36077,essv52508,nssv708763,nssv708764;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=NA18907,sample_nssv708764,sample_nssv708763,NA12006;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2892824	2894699	.	.	.	ID=gssv534;Name=gssv534;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2892794;inner_start=2892824;inner_end=2894699;outer_end=2894919;inner_rank=7;num_variants=4;variants=essv36077,essv52508,nssv708763,nssv708764;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=NA18907,sample_nssv708764,sample_nssv708763,NA12006;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2894919	2894919	.	.	.	ID=gssv534;Name=gssv534;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2892794;inner_start=2892824;inner_end=2894699;outer_end=2894919;inner_rank=7;num_variants=4;variants=essv36077,essv52508,nssv708763,nssv708764;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=NA18907,sample_nssv708764,sample_nssv708763,NA12006;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 3:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4284510	4284510	.	.	.	ID=gssv548;Name=gssv548;variant_type=CNV;variant_sub_type=Loss;outer_start=4284510;inner_start=4284519;inner_end=4285954;outer_end=4286005;inner_rank=7;num_variants=24;variants=essv9844494,essv9844495,essv9844496,essv9844497,essv9844498,essv9844499,essv9844500,essv9844501,essv9844502,essv9844503,essv9844504,essv9844505,essv9844506,essv9844507,essv9844508,essv9844509,essv9844510,essv9844511,essv9844512,essv5576141,essv5921466,essv66246,essv5878844,essv6364689;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=21;samples=HG02013,HG01497,HG02586,NA19184,HG02715,HG03123,HG03124,HG03388,HG03394,NA19238,NA19131,HG02882,NA19713,HG02768,NA20351,HG03464,NA19704,HG03372,HG02804,NA19240,HG02502;num_samples_tested=3599;frequency=0.58%;num_unique_samples_tested=2565;nr_frequency=0.81%;PopulationSummary=European 0:Asian 0:Mexican 0:African 20:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4284519	4285954	.	.	.	ID=gssv548;Name=gssv548;variant_type=CNV;variant_sub_type=Loss;outer_start=4284510;inner_start=4284519;inner_end=4285954;outer_end=4286005;inner_rank=7;num_variants=24;variants=essv9844494,essv9844495,essv9844496,essv9844497,essv9844498,essv9844499,essv9844500,essv9844501,essv9844502,essv9844503,essv9844504,essv9844505,essv9844506,essv9844507,essv9844508,essv9844509,essv9844510,essv9844511,essv9844512,essv5576141,essv5921466,essv66246,essv5878844,essv6364689;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=21;samples=HG02013,HG01497,HG02586,NA19184,HG02715,HG03123,HG03124,HG03388,HG03394,NA19238,NA19131,HG02882,NA19713,HG02768,NA20351,HG03464,NA19704,HG03372,HG02804,NA19240,HG02502;num_samples_tested=3599;frequency=0.58%;num_unique_samples_tested=2565;nr_frequency=0.81%;PopulationSummary=European 0:Asian 0:Mexican 0:African 20:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4286005	4286005	.	.	.	ID=gssv548;Name=gssv548;variant_type=CNV;variant_sub_type=Loss;outer_start=4284510;inner_start=4284519;inner_end=4285954;outer_end=4286005;inner_rank=7;num_variants=24;variants=essv9844494,essv9844495,essv9844496,essv9844497,essv9844498,essv9844499,essv9844500,essv9844501,essv9844502,essv9844503,essv9844504,essv9844505,essv9844506,essv9844507,essv9844508,essv9844509,essv9844510,essv9844511,essv9844512,essv5576141,essv5921466,essv66246,essv5878844,essv6364689;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=21;samples=HG02013,HG01497,HG02586,NA19184,HG02715,HG03123,HG03124,HG03388,HG03394,NA19238,NA19131,HG02882,NA19713,HG02768,NA20351,HG03464,NA19704,HG03372,HG02804,NA19240,HG02502;num_samples_tested=3599;frequency=0.58%;num_unique_samples_tested=2565;nr_frequency=0.81%;PopulationSummary=European 0:Asian 0:Mexican 0:African 20:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3097398	3097398	.	.	.	ID=gssv551;Name=gssv551;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=3097398;inner_start=3097452;inner_end=3098556;outer_end=3098803;inner_rank=7;num_variants=6;variants=essv50944,essv3586288,essv39611,essv56612,essv74704,essv62738;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=6;samples=NA11931,NA12004,NA15510,HuRef,NA12287,NA12776;num_samples_tested=41;frequency=14.63%;num_unique_samples_tested=41;nr_frequency=14.63%;PopulationSummary=European 5:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3097452	3098556	.	.	.	ID=gssv551;Name=gssv551;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=3097398;inner_start=3097452;inner_end=3098556;outer_end=3098803;inner_rank=7;num_variants=6;variants=essv50944,essv3586288,essv39611,essv56612,essv74704,essv62738;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=6;samples=NA11931,NA12004,NA15510,HuRef,NA12287,NA12776;num_samples_tested=41;frequency=14.63%;num_unique_samples_tested=41;nr_frequency=14.63%;PopulationSummary=European 5:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3098803	3098803	.	.	.	ID=gssv551;Name=gssv551;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=3097398;inner_start=3097452;inner_end=3098556;outer_end=3098803;inner_rank=7;num_variants=6;variants=essv50944,essv3586288,essv39611,essv56612,essv74704,essv62738;num_studies=2;studies=Pang2010,Conrad2009;num_platforms=1;platforms=NimbleGen42M;num_algorithms=1;algorithms=GADA;num_samples=6;samples=NA11931,NA12004,NA15510,HuRef,NA12287,NA12776;num_samples_tested=41;frequency=14.63%;num_unique_samples_tested=41;nr_frequency=14.63%;PopulationSummary=European 5:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4392421	4392421	.	.	.	ID=gssv555;Name=gssv555;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4392421;inner_start=4392494;inner_end=4393627;outer_end=4393668;inner_rank=7;num_variants=50;variants=essv33593,essv37456,essv45882,essv73012,essv76306,essv36300,essv39715,essv41941,essv42763,essv47209,essv54598,essv59136,essv65261,essv77270,essv82074,essv38728,essv40540,essv51062,essv66572,essv70518,nssv708885,nssv708886,nssv708887,nssv708888,nssv708889,nssv708890,nssv708891,nssv708892,nssv708893,nssv708894,nssv708895,nssv708896,nssv708897,nssv708898,nssv708899,nssv708900,nssv708901,nssv708902,nssv708903,nssv708904,nssv708905,nssv708906,nssv708907,nssv708908,nssv708909,nssv708910,nssv708911,nssv708912,nssv708913,essv49554;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=50;samples=NA12828,NA19225,NA11894,sample_nssv708904,NA19147,sample_nssv708890,sample_nssv708891,sample_nssv708892,sample_nssv708893,NA18861,sample_nssv708895,sample_nssv708896,sample_nssv708897,sample_nssv708898,sample_nssv708899,NA18909,NA18907,NA18517,NA18511,NA12878,NA19257,NA12287,sample_nssv708910,NA19114,sample_nssv708912,NA11931,sample_nssv708908,sample_nssv708889,sample_nssv708888,sample_nssv708887,sample_nssv708886,sample_nssv708885,sample_nssv708909,sample_nssv708907,NA19240,NA12414,NA18916,sample_nssv708911,sample_nssv708913,NA19108,NA19099,NA18505,sample_nssv708906,sample_nssv708894,NA19129,sample_nssv708905,sample_nssv708902,sample_nssv708903,sample_nssv708900,sample_nssv708901;num_samples_tested=1540;frequency=3.25%;num_unique_samples_tested=1540;nr_frequency=3.24%;PopulationSummary=European 35:Asian 0:Mexican 0:African 15:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4392494	4393627	.	.	.	ID=gssv555;Name=gssv555;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4392421;inner_start=4392494;inner_end=4393627;outer_end=4393668;inner_rank=7;num_variants=50;variants=essv33593,essv37456,essv45882,essv73012,essv76306,essv36300,essv39715,essv41941,essv42763,essv47209,essv54598,essv59136,essv65261,essv77270,essv82074,essv38728,essv40540,essv51062,essv66572,essv70518,nssv708885,nssv708886,nssv708887,nssv708888,nssv708889,nssv708890,nssv708891,nssv708892,nssv708893,nssv708894,nssv708895,nssv708896,nssv708897,nssv708898,nssv708899,nssv708900,nssv708901,nssv708902,nssv708903,nssv708904,nssv708905,nssv708906,nssv708907,nssv708908,nssv708909,nssv708910,nssv708911,nssv708912,nssv708913,essv49554;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=50;samples=NA12828,NA19225,NA11894,sample_nssv708904,NA19147,sample_nssv708890,sample_nssv708891,sample_nssv708892,sample_nssv708893,NA18861,sample_nssv708895,sample_nssv708896,sample_nssv708897,sample_nssv708898,sample_nssv708899,NA18909,NA18907,NA18517,NA18511,NA12878,NA19257,NA12287,sample_nssv708910,NA19114,sample_nssv708912,NA11931,sample_nssv708908,sample_nssv708889,sample_nssv708888,sample_nssv708887,sample_nssv708886,sample_nssv708885,sample_nssv708909,sample_nssv708907,NA19240,NA12414,NA18916,sample_nssv708911,sample_nssv708913,NA19108,NA19099,NA18505,sample_nssv708906,sample_nssv708894,NA19129,sample_nssv708905,sample_nssv708902,sample_nssv708903,sample_nssv708900,sample_nssv708901;num_samples_tested=1540;frequency=3.25%;num_unique_samples_tested=1540;nr_frequency=3.24%;PopulationSummary=European 35:Asian 0:Mexican 0:African 15:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4393668	4393668	.	.	.	ID=gssv555;Name=gssv555;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4392421;inner_start=4392494;inner_end=4393627;outer_end=4393668;inner_rank=7;num_variants=50;variants=essv33593,essv37456,essv45882,essv73012,essv76306,essv36300,essv39715,essv41941,essv42763,essv47209,essv54598,essv59136,essv65261,essv77270,essv82074,essv38728,essv40540,essv51062,essv66572,essv70518,nssv708885,nssv708886,nssv708887,nssv708888,nssv708889,nssv708890,nssv708891,nssv708892,nssv708893,nssv708894,nssv708895,nssv708896,nssv708897,nssv708898,nssv708899,nssv708900,nssv708901,nssv708902,nssv708903,nssv708904,nssv708905,nssv708906,nssv708907,nssv708908,nssv708909,nssv708910,nssv708911,nssv708912,nssv708913,essv49554;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=50;samples=NA12828,NA19225,NA11894,sample_nssv708904,NA19147,sample_nssv708890,sample_nssv708891,sample_nssv708892,sample_nssv708893,NA18861,sample_nssv708895,sample_nssv708896,sample_nssv708897,sample_nssv708898,sample_nssv708899,NA18909,NA18907,NA18517,NA18511,NA12878,NA19257,NA12287,sample_nssv708910,NA19114,sample_nssv708912,NA11931,sample_nssv708908,sample_nssv708889,sample_nssv708888,sample_nssv708887,sample_nssv708886,sample_nssv708885,sample_nssv708909,sample_nssv708907,NA19240,NA12414,NA18916,sample_nssv708911,sample_nssv708913,NA19108,NA19099,NA18505,sample_nssv708906,sample_nssv708894,NA19129,sample_nssv708905,sample_nssv708902,sample_nssv708903,sample_nssv708900,sample_nssv708901;num_samples_tested=1540;frequency=3.25%;num_unique_samples_tested=1540;nr_frequency=3.24%;PopulationSummary=European 35:Asian 0:Mexican 0:African 15:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3670490	3670490	.	.	.	ID=gssv556;Name=gssv556;variant_type=CNV;variant_sub_type=Loss;outer_start=3670490;inner_start=3670511;inner_end=3671643;outer_end=3671676;inner_rank=8;num_variants=15;variants=essv9841985,essv9841986,essv9841987,essv9841988,essv9841989,essv9841990,essv9841991,essv9841992,essv5470080,essv5770360,essv5786877,essv6060763,essv6182763,essv6358993,essv6424233;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=13;samples=NA18910,NA18853,NA19397,HG02429,NA19307,NA19373,NA19324,NA18501,NA19381,HG03370,HG02496,NA19473,HG02479;num_samples_tested=3559;frequency=0.37%;num_unique_samples_tested=2562;nr_frequency=0.5%;PopulationSummary=European 0:Asian 0:Mexican 0:African 13:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3670511	3671643	.	.	.	ID=gssv556;Name=gssv556;variant_type=CNV;variant_sub_type=Loss;outer_start=3670490;inner_start=3670511;inner_end=3671643;outer_end=3671676;inner_rank=8;num_variants=15;variants=essv9841985,essv9841986,essv9841987,essv9841988,essv9841989,essv9841990,essv9841991,essv9841992,essv5470080,essv5770360,essv5786877,essv6060763,essv6182763,essv6358993,essv6424233;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=13;samples=NA18910,NA18853,NA19397,HG02429,NA19307,NA19373,NA19324,NA18501,NA19381,HG03370,HG02496,NA19473,HG02479;num_samples_tested=3559;frequency=0.37%;num_unique_samples_tested=2562;nr_frequency=0.5%;PopulationSummary=European 0:Asian 0:Mexican 0:African 13:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3671676	3671676	.	.	.	ID=gssv556;Name=gssv556;variant_type=CNV;variant_sub_type=Loss;outer_start=3670490;inner_start=3670511;inner_end=3671643;outer_end=3671676;inner_rank=8;num_variants=15;variants=essv9841985,essv9841986,essv9841987,essv9841988,essv9841989,essv9841990,essv9841991,essv9841992,essv5470080,essv5770360,essv5786877,essv6060763,essv6182763,essv6358993,essv6424233;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=13;samples=NA18910,NA18853,NA19397,HG02429,NA19307,NA19373,NA19324,NA18501,NA19381,HG03370,HG02496,NA19473,HG02479;num_samples_tested=3559;frequency=0.37%;num_unique_samples_tested=2562;nr_frequency=0.5%;PopulationSummary=European 0:Asian 0:Mexican 0:African 13:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4137818	4137818	.	.	.	ID=gssv558;Name=gssv558;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4137818;inner_start=4137818;inner_end=4138918;outer_end=4138918;inner_rank=7;num_variants=3;variants=essv32891,essv66435,nssv1420735;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=NA10851,NA19147,NA12828;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4137818	4138918	.	.	.	ID=gssv558;Name=gssv558;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4137818;inner_start=4137818;inner_end=4138918;outer_end=4138918;inner_rank=7;num_variants=3;variants=essv32891,essv66435,nssv1420735;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=NA10851,NA19147,NA12828;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4138918	4138918	.	.	.	ID=gssv558;Name=gssv558;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=4137818;inner_start=4137818;inner_end=4138918;outer_end=4138918;inner_rank=7;num_variants=3;variants=essv32891,essv66435,nssv1420735;num_studies=2;studies=Ju2010,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=NA10851,NA19147,NA12828;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3083952	3083952	.	.	.	ID=gssv561;Name=gssv561;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=3083952;inner_start=3083952;inner_end=3084887;outer_end=3084887;inner_rank=7;num_variants=15;variants=essv73656,nssv708768,nssv708771,nssv708783,nssv708784,nssv708785,nssv708786,nssv708787,nssv708788,nssv708789,nssv708790,nssv708791,nssv708792,nssv708793,nssv708794;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=15;samples=NA12156,sample_nssv708792,sample_nssv708788,sample_nssv708789,sample_nssv708794,sample_nssv708771,sample_nssv708786,sample_nssv708791,sample_nssv708790,sample_nssv708793,sample_nssv708783,sample_nssv708784,sample_nssv708785,sample_nssv708768,sample_nssv708787;num_samples_tested=1540;frequency=0.97%;num_unique_samples_tested=1540;nr_frequency=0.97%;PopulationSummary=European 15:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3083952	3084887	.	.	.	ID=gssv561;Name=gssv561;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=3083952;inner_start=3083952;inner_end=3084887;outer_end=3084887;inner_rank=7;num_variants=15;variants=essv73656,nssv708768,nssv708771,nssv708783,nssv708784,nssv708785,nssv708786,nssv708787,nssv708788,nssv708789,nssv708790,nssv708791,nssv708792,nssv708793,nssv708794;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=15;samples=NA12156,sample_nssv708792,sample_nssv708788,sample_nssv708789,sample_nssv708794,sample_nssv708771,sample_nssv708786,sample_nssv708791,sample_nssv708790,sample_nssv708793,sample_nssv708783,sample_nssv708784,sample_nssv708785,sample_nssv708768,sample_nssv708787;num_samples_tested=1540;frequency=0.97%;num_unique_samples_tested=1540;nr_frequency=0.97%;PopulationSummary=European 15:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3084887	3084887	.	.	.	ID=gssv561;Name=gssv561;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=3083952;inner_start=3083952;inner_end=3084887;outer_end=3084887;inner_rank=7;num_variants=15;variants=essv73656,nssv708768,nssv708771,nssv708783,nssv708784,nssv708785,nssv708786,nssv708787,nssv708788,nssv708789,nssv708790,nssv708791,nssv708792,nssv708793,nssv708794;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=15;samples=NA12156,sample_nssv708792,sample_nssv708788,sample_nssv708789,sample_nssv708794,sample_nssv708771,sample_nssv708786,sample_nssv708791,sample_nssv708790,sample_nssv708793,sample_nssv708783,sample_nssv708784,sample_nssv708785,sample_nssv708768,sample_nssv708787;num_samples_tested=1540;frequency=0.97%;num_unique_samples_tested=1540;nr_frequency=0.97%;PopulationSummary=European 15:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4125979	4125979	.	.	.	ID=gssv570;Name=gssv570;variant_type=CNV;variant_sub_type=Loss;outer_start=4125979;inner_start=4126085;inner_end=4126927;outer_end=4126949;inner_rank=8;num_variants=165;variants=essv5396397,essv5398540,essv5399380,essv5399652,essv5408507,essv5425795,essv5449072,essv5467675,essv5488758,essv5488977,essv5491977,essv5493897,essv5498082,essv5506453,essv5517279,essv5525789,essv5542484,essv5546034,essv5561265,essv5562234,essv5562372,essv5564807,essv5570165,essv5579169,essv5587965,essv5594887,essv5595754,essv5599412,essv5611218,essv5611952,essv5625920,essv5629152,essv5633189,essv5641958,essv5643785,essv5648304,essv5653244,essv5658488,essv5666029,essv5666226,essv5687137,essv5708232,essv5734101,essv5734729,essv5736767,essv5748277,essv5774617,essv5782482,essv5796232,essv5797395,essv5812467,essv5827561,essv5836532,essv5868809,essv5899575,essv5901227,essv5902616,essv5911032,essv5914979,essv5918517,essv5920881,essv5923416,essv5931335,essv5961388,essv5965802,essv5967229,essv5972504,essv5974874,essv5979424,essv5980565,essv5998244,essv6015255,essv6015687,essv6016778,essv6020686,essv6032435,essv6050770,essv6051050,essv6051234,essv6062899,essv6068484,essv6101559,essv6103296,essv6110021,essv6119812,essv6138720,essv6152916,essv6162011,essv6173922,essv6215151,essv6227603,essv6230726,essv6249744,essv6262114,essv6267749,essv6275469,essv6276587,essv6291765,essv6296835,essv6301718,essv6308325,essv6318344,essv6333009,essv6334524,essv6335525,essv6344394,essv6345087,essv6347564,essv6358854,essv6376390,essv6388319,essv6400095,essv6413270,essv6425861,essv6427131,essv6436090,essv6438047,essv6455051,essv6462209,essv6467714,essv6468837,essv6477021,essv6487880,essv6489200,essv6494101,essv6537004,essv6548105,essv6553587,essv6560124,essv6563849,essv6567499,essv6568526,essv6574978,essv6581684,essv6586710,essv6592539,essv6598408,essv5397339,essv5429954,essv5460584,essv5469078,essv5513079,essv5597052,essv5660784,essv5674947,essv5785443,essv5846943,essv5902627,essv5924049,essv5942249,essv5960275,essv5996856,essv6060226,essv6069179,essv6084444,essv6100186,essv6227336,essv6256740,essv6344158,essv6386224,essv6387053,essv6431344,essv6481654,essv6503553,essv28205;num_studies=2;studies=Ahn2009,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=157;samples=NA18565,NA18560,NA18561,NA19779,NA20769,NA19777,NA18988,NA19771,NA11831,NA11830,NA18867,HG01440,HG00119,NA20299,HG00258,HG01095,HG00705,HG00707,NA18908,HG00702,NA19682,HG00145,NA19681,NA19684,NA19350,HG00427,NA19355,HG00542,NA19440,NA18559,NA19701,HG00683,NA19172,NA06989,HG01456,NA18874,NA06984,HG01519,NA18487,HG00159,HG00154,HG00264,HG00265,NA18977,NA19471,NA18489,NA19917,NA19651,HG00280,NA19655,NA19654,NA19658,NA19713,NA18542,NA18541,HG01173,NA19783,NA19780,NA19461,NA18964,NA19060,NA19731,NA19066,NA19067,NA19065,NA19372,NA19068,HG01374,NA19004,NA19005,HG00284,HG00285,NA18533,HG01168,NA18950,NA11994,NA19393,HG00325,NA20787,NA20544,NA20541,HG01070,HG01047,HG00472,NA18625,NA19092,NA18620,NA18952,NA18942,NA12347,NA12342,NA12341,NA12348,NA12155,NA12154,HG01351,NA20795,HG01353,HG01359,NA19725,NA20340,HG00501,HG00500,HG01055,NA19729,HG01198,NA19747,HG01494,NA19235,NA20322,NA12003,HG00111,HG00116,HG00117,NA20816,NA20814,NA20810,HG01342,HG00306,NA19921,HG00590,HG01187,HG01465,HG00190,NA20582,NA20588,NA19189,HG00124,NA20800,HG00120,NA20802,HG00253,NA12400,NA18595,NA19835,HG00313,HG00310,NA20801,HG00524,NA19331,NA20757,NA19213,NA19982,NA18999,NA19904,NA19901,NA19900,HG00732,NA07048,HG00245,SJK,HG00367,NA18856,HG00436,NA19347,HG00536,HG00534;num_samples_tested=1056;frequency=14.87%;num_unique_samples_tested=1056;nr_frequency=14.86%;PopulationSummary=European 52:Asian 39:Mexican 16:African 32:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 18:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4126085	4126927	.	.	.	ID=gssv570;Name=gssv570;variant_type=CNV;variant_sub_type=Loss;outer_start=4125979;inner_start=4126085;inner_end=4126927;outer_end=4126949;inner_rank=8;num_variants=165;variants=essv5396397,essv5398540,essv5399380,essv5399652,essv5408507,essv5425795,essv5449072,essv5467675,essv5488758,essv5488977,essv5491977,essv5493897,essv5498082,essv5506453,essv5517279,essv5525789,essv5542484,essv5546034,essv5561265,essv5562234,essv5562372,essv5564807,essv5570165,essv5579169,essv5587965,essv5594887,essv5595754,essv5599412,essv5611218,essv5611952,essv5625920,essv5629152,essv5633189,essv5641958,essv5643785,essv5648304,essv5653244,essv5658488,essv5666029,essv5666226,essv5687137,essv5708232,essv5734101,essv5734729,essv5736767,essv5748277,essv5774617,essv5782482,essv5796232,essv5797395,essv5812467,essv5827561,essv5836532,essv5868809,essv5899575,essv5901227,essv5902616,essv5911032,essv5914979,essv5918517,essv5920881,essv5923416,essv5931335,essv5961388,essv5965802,essv5967229,essv5972504,essv5974874,essv5979424,essv5980565,essv5998244,essv6015255,essv6015687,essv6016778,essv6020686,essv6032435,essv6050770,essv6051050,essv6051234,essv6062899,essv6068484,essv6101559,essv6103296,essv6110021,essv6119812,essv6138720,essv6152916,essv6162011,essv6173922,essv6215151,essv6227603,essv6230726,essv6249744,essv6262114,essv6267749,essv6275469,essv6276587,essv6291765,essv6296835,essv6301718,essv6308325,essv6318344,essv6333009,essv6334524,essv6335525,essv6344394,essv6345087,essv6347564,essv6358854,essv6376390,essv6388319,essv6400095,essv6413270,essv6425861,essv6427131,essv6436090,essv6438047,essv6455051,essv6462209,essv6467714,essv6468837,essv6477021,essv6487880,essv6489200,essv6494101,essv6537004,essv6548105,essv6553587,essv6560124,essv6563849,essv6567499,essv6568526,essv6574978,essv6581684,essv6586710,essv6592539,essv6598408,essv5397339,essv5429954,essv5460584,essv5469078,essv5513079,essv5597052,essv5660784,essv5674947,essv5785443,essv5846943,essv5902627,essv5924049,essv5942249,essv5960275,essv5996856,essv6060226,essv6069179,essv6084444,essv6100186,essv6227336,essv6256740,essv6344158,essv6386224,essv6387053,essv6431344,essv6481654,essv6503553,essv28205;num_studies=2;studies=Ahn2009,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=157;samples=NA18565,NA18560,NA18561,NA19779,NA20769,NA19777,NA18988,NA19771,NA11831,NA11830,NA18867,HG01440,HG00119,NA20299,HG00258,HG01095,HG00705,HG00707,NA18908,HG00702,NA19682,HG00145,NA19681,NA19684,NA19350,HG00427,NA19355,HG00542,NA19440,NA18559,NA19701,HG00683,NA19172,NA06989,HG01456,NA18874,NA06984,HG01519,NA18487,HG00159,HG00154,HG00264,HG00265,NA18977,NA19471,NA18489,NA19917,NA19651,HG00280,NA19655,NA19654,NA19658,NA19713,NA18542,NA18541,HG01173,NA19783,NA19780,NA19461,NA18964,NA19060,NA19731,NA19066,NA19067,NA19065,NA19372,NA19068,HG01374,NA19004,NA19005,HG00284,HG00285,NA18533,HG01168,NA18950,NA11994,NA19393,HG00325,NA20787,NA20544,NA20541,HG01070,HG01047,HG00472,NA18625,NA19092,NA18620,NA18952,NA18942,NA12347,NA12342,NA12341,NA12348,NA12155,NA12154,HG01351,NA20795,HG01353,HG01359,NA19725,NA20340,HG00501,HG00500,HG01055,NA19729,HG01198,NA19747,HG01494,NA19235,NA20322,NA12003,HG00111,HG00116,HG00117,NA20816,NA20814,NA20810,HG01342,HG00306,NA19921,HG00590,HG01187,HG01465,HG00190,NA20582,NA20588,NA19189,HG00124,NA20800,HG00120,NA20802,HG00253,NA12400,NA18595,NA19835,HG00313,HG00310,NA20801,HG00524,NA19331,NA20757,NA19213,NA19982,NA18999,NA19904,NA19901,NA19900,HG00732,NA07048,HG00245,SJK,HG00367,NA18856,HG00436,NA19347,HG00536,HG00534;num_samples_tested=1056;frequency=14.87%;num_unique_samples_tested=1056;nr_frequency=14.86%;PopulationSummary=European 52:Asian 39:Mexican 16:African 32:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 18:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4126949	4126949	.	.	.	ID=gssv570;Name=gssv570;variant_type=CNV;variant_sub_type=Loss;outer_start=4125979;inner_start=4126085;inner_end=4126927;outer_end=4126949;inner_rank=8;num_variants=165;variants=essv5396397,essv5398540,essv5399380,essv5399652,essv5408507,essv5425795,essv5449072,essv5467675,essv5488758,essv5488977,essv5491977,essv5493897,essv5498082,essv5506453,essv5517279,essv5525789,essv5542484,essv5546034,essv5561265,essv5562234,essv5562372,essv5564807,essv5570165,essv5579169,essv5587965,essv5594887,essv5595754,essv5599412,essv5611218,essv5611952,essv5625920,essv5629152,essv5633189,essv5641958,essv5643785,essv5648304,essv5653244,essv5658488,essv5666029,essv5666226,essv5687137,essv5708232,essv5734101,essv5734729,essv5736767,essv5748277,essv5774617,essv5782482,essv5796232,essv5797395,essv5812467,essv5827561,essv5836532,essv5868809,essv5899575,essv5901227,essv5902616,essv5911032,essv5914979,essv5918517,essv5920881,essv5923416,essv5931335,essv5961388,essv5965802,essv5967229,essv5972504,essv5974874,essv5979424,essv5980565,essv5998244,essv6015255,essv6015687,essv6016778,essv6020686,essv6032435,essv6050770,essv6051050,essv6051234,essv6062899,essv6068484,essv6101559,essv6103296,essv6110021,essv6119812,essv6138720,essv6152916,essv6162011,essv6173922,essv6215151,essv6227603,essv6230726,essv6249744,essv6262114,essv6267749,essv6275469,essv6276587,essv6291765,essv6296835,essv6301718,essv6308325,essv6318344,essv6333009,essv6334524,essv6335525,essv6344394,essv6345087,essv6347564,essv6358854,essv6376390,essv6388319,essv6400095,essv6413270,essv6425861,essv6427131,essv6436090,essv6438047,essv6455051,essv6462209,essv6467714,essv6468837,essv6477021,essv6487880,essv6489200,essv6494101,essv6537004,essv6548105,essv6553587,essv6560124,essv6563849,essv6567499,essv6568526,essv6574978,essv6581684,essv6586710,essv6592539,essv6598408,essv5397339,essv5429954,essv5460584,essv5469078,essv5513079,essv5597052,essv5660784,essv5674947,essv5785443,essv5846943,essv5902627,essv5924049,essv5942249,essv5960275,essv5996856,essv6060226,essv6069179,essv6084444,essv6100186,essv6227336,essv6256740,essv6344158,essv6386224,essv6387053,essv6431344,essv6481654,essv6503553,essv28205;num_studies=2;studies=Ahn2009,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=157;samples=NA18565,NA18560,NA18561,NA19779,NA20769,NA19777,NA18988,NA19771,NA11831,NA11830,NA18867,HG01440,HG00119,NA20299,HG00258,HG01095,HG00705,HG00707,NA18908,HG00702,NA19682,HG00145,NA19681,NA19684,NA19350,HG00427,NA19355,HG00542,NA19440,NA18559,NA19701,HG00683,NA19172,NA06989,HG01456,NA18874,NA06984,HG01519,NA18487,HG00159,HG00154,HG00264,HG00265,NA18977,NA19471,NA18489,NA19917,NA19651,HG00280,NA19655,NA19654,NA19658,NA19713,NA18542,NA18541,HG01173,NA19783,NA19780,NA19461,NA18964,NA19060,NA19731,NA19066,NA19067,NA19065,NA19372,NA19068,HG01374,NA19004,NA19005,HG00284,HG00285,NA18533,HG01168,NA18950,NA11994,NA19393,HG00325,NA20787,NA20544,NA20541,HG01070,HG01047,HG00472,NA18625,NA19092,NA18620,NA18952,NA18942,NA12347,NA12342,NA12341,NA12348,NA12155,NA12154,HG01351,NA20795,HG01353,HG01359,NA19725,NA20340,HG00501,HG00500,HG01055,NA19729,HG01198,NA19747,HG01494,NA19235,NA20322,NA12003,HG00111,HG00116,HG00117,NA20816,NA20814,NA20810,HG01342,HG00306,NA19921,HG00590,HG01187,HG01465,HG00190,NA20582,NA20588,NA19189,HG00124,NA20800,HG00120,NA20802,HG00253,NA12400,NA18595,NA19835,HG00313,HG00310,NA20801,HG00524,NA19331,NA20757,NA19213,NA19982,NA18999,NA19904,NA19901,NA19900,HG00732,NA07048,HG00245,SJK,HG00367,NA18856,HG00436,NA19347,HG00536,HG00534;num_samples_tested=1056;frequency=14.87%;num_unique_samples_tested=1056;nr_frequency=14.86%;PopulationSummary=European 52:Asian 39:Mexican 16:African 32:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 18:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2565924	2565924	.	.	.	ID=gssv572;Name=gssv572;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2565924;inner_start=2565924;inner_end=2566759;outer_end=2566759;inner_rank=7;num_variants=2;variants=essv69307,essv4612274;num_studies=2;studies=Bentley2008,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=2;samples=NA12044,NA18507;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2565924	2566759	.	.	.	ID=gssv572;Name=gssv572;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2565924;inner_start=2565924;inner_end=2566759;outer_end=2566759;inner_rank=7;num_variants=2;variants=essv69307,essv4612274;num_studies=2;studies=Bentley2008,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=2;samples=NA12044,NA18507;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2566759	2566759	.	.	.	ID=gssv572;Name=gssv572;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=2565924;inner_start=2565924;inner_end=2566759;outer_end=2566759;inner_rank=7;num_variants=2;variants=essv69307,essv4612274;num_studies=2;studies=Bentley2008,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=2;samples=NA12044,NA18507;num_samples_tested=41;frequency=4.88%;num_unique_samples_tested=41;nr_frequency=4.87%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4392874	4392874	.	.	.	ID=gssv576;Name=gssv576;variant_type=CNV;variant_sub_type=Loss;outer_start=4392874;inner_start=4392886;inner_end=4393623;outer_end=4393623;inner_rank=7;num_variants=9;variants=essv44905,nssv708926,nssv708927,nssv708928,nssv708929,nssv708930,nssv708931,nssv708932,nssv708933;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=9;samples=sample_nssv708933,sample_nssv708932,sample_nssv708926,sample_nssv708927,sample_nssv708928,sample_nssv708929,sample_nssv708931,sample_nssv708930,NA12489;num_samples_tested=1540;frequency=0.58%;num_unique_samples_tested=1540;nr_frequency=0.58%;PopulationSummary=European 9:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4392886	4393623	.	.	.	ID=gssv576;Name=gssv576;variant_type=CNV;variant_sub_type=Loss;outer_start=4392874;inner_start=4392886;inner_end=4393623;outer_end=4393623;inner_rank=7;num_variants=9;variants=essv44905,nssv708926,nssv708927,nssv708928,nssv708929,nssv708930,nssv708931,nssv708932,nssv708933;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=9;samples=sample_nssv708933,sample_nssv708932,sample_nssv708926,sample_nssv708927,sample_nssv708928,sample_nssv708929,sample_nssv708931,sample_nssv708930,NA12489;num_samples_tested=1540;frequency=0.58%;num_unique_samples_tested=1540;nr_frequency=0.58%;PopulationSummary=European 9:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4393623	4393623	.	.	.	ID=gssv576;Name=gssv576;variant_type=CNV;variant_sub_type=Loss;outer_start=4392874;inner_start=4392886;inner_end=4393623;outer_end=4393623;inner_rank=7;num_variants=9;variants=essv44905,nssv708926,nssv708927,nssv708928,nssv708929,nssv708930,nssv708931,nssv708932,nssv708933;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=9;samples=sample_nssv708933,sample_nssv708932,sample_nssv708926,sample_nssv708927,sample_nssv708928,sample_nssv708929,sample_nssv708931,sample_nssv708930,NA12489;num_samples_tested=1540;frequency=0.58%;num_unique_samples_tested=1540;nr_frequency=0.58%;PopulationSummary=European 9:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4154970	4154970	.	.	.	ID=gssv580;Name=gssv580;variant_type=CNV;variant_sub_type=Loss;outer_start=4154970;inner_start=4155009;inner_end=4155624;outer_end=4155665;inner_rank=9;num_variants=2;variants=essv4563770,essv26328;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4155009	4155624	.	.	.	ID=gssv580;Name=gssv580;variant_type=CNV;variant_sub_type=Loss;outer_start=4154970;inner_start=4155009;inner_end=4155624;outer_end=4155665;inner_rank=9;num_variants=2;variants=essv4563770,essv26328;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4155665	4155665	.	.	.	ID=gssv580;Name=gssv580;variant_type=CNV;variant_sub_type=Loss;outer_start=4154970;inner_start=4155009;inner_end=4155624;outer_end=4155665;inner_rank=9;num_variants=2;variants=essv4563770,essv26328;num_studies=2;studies=Bentley2008,Wang2008;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=YH,NA18507;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3062996	3062996	.	.	.	ID=gssv593;Name=gssv593;variant_type=CNV;variant_sub_type=Loss;outer_start=3062996;inner_start=3062996;inner_end=3063471;outer_end=3063479;inner_rank=8;num_variants=2;variants=essv6381855,essv9761173;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=sample_essv9761173,NA12287;num_samples_tested=1822;frequency=0.11%;num_unique_samples_tested=1822;nr_frequency=0.1%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3062996	3063471	.	.	.	ID=gssv593;Name=gssv593;variant_type=CNV;variant_sub_type=Loss;outer_start=3062996;inner_start=3062996;inner_end=3063471;outer_end=3063479;inner_rank=8;num_variants=2;variants=essv6381855,essv9761173;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=sample_essv9761173,NA12287;num_samples_tested=1822;frequency=0.11%;num_unique_samples_tested=1822;nr_frequency=0.1%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3063479	3063479	.	.	.	ID=gssv593;Name=gssv593;variant_type=CNV;variant_sub_type=Loss;outer_start=3062996;inner_start=3062996;inner_end=3063471;outer_end=3063479;inner_rank=8;num_variants=2;variants=essv6381855,essv9761173;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=2;samples=sample_essv9761173,NA12287;num_samples_tested=1822;frequency=0.11%;num_unique_samples_tested=1822;nr_frequency=0.1%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2911489	2911489	.	.	.	ID=gssv602;Name=gssv602;variant_type=CNV;variant_sub_type=Loss;outer_start=2911489;inner_start=2911535;inner_end=2911850;outer_end=2911934;inner_rank=8;num_variants=384;variants=essv27296,essv29735,essv9760617,essv5399971,essv5404463,essv5414063,essv5414557,essv5428152,essv5429758,essv5431123,essv5432275,essv5432906,essv5433339,essv5435381,essv5435936,essv5443311,essv5447486,essv5447744,essv5447805,essv5454994,essv5458624,essv5461812,essv5465497,essv5469348,essv5469481,essv5474192,essv5476202,essv5477946,essv5480759,essv5486533,essv5489110,essv5489245,essv5490928,essv5490976,essv5500985,essv5502157,essv5504884,essv5507776,essv5509926,essv5512415,essv5514647,essv5522431,essv5522718,essv5529389,essv5530400,essv5531187,essv5536256,essv5539004,essv5543551,essv5551330,essv5553306,essv5554599,essv5557036,essv5558327,essv5564212,essv5572191,essv5572810,essv5574767,essv5575340,essv5577290,essv5580301,essv5584890,essv5589478,essv5592265,essv5596378,essv5597447,essv5599481,essv5599535,essv5600500,essv5612072,essv5614234,essv5614898,essv5624718,essv5629229,essv5631767,essv5633640,essv5634505,essv5636136,essv5637052,essv5639321,essv5642245,essv5642484,essv5643554,essv5647612,essv5647681,essv5650561,essv5656032,essv5661341,essv5671053,essv5672362,essv5673315,essv5673991,essv5677856,essv5684112,essv5685298,essv5688414,essv5691096,essv5691787,essv5693233,essv5697903,essv5699555,essv5701034,essv5701686,essv5704851,essv5708533,essv5708654,essv5712060,essv5714971,essv5716623,essv5717384,essv5717642,essv5719282,essv5719839,essv5720133,essv5725070,essv5726003,essv5729242,essv5731720,essv5741322,essv5742756,essv5750076,essv5752055,essv5755211,essv5758043,essv5761784,essv5771748,essv5774344,essv5777985,essv5778284,essv5778444,essv5778612,essv5786723,essv5788490,essv5792620,essv5794795,essv5800077,essv5803288,essv5824283,essv5826988,essv5827690,essv5831713,essv5841860,essv5843227,essv5855943,essv5856474,essv5856810,essv5857475,essv5858963,essv5865000,essv5866133,essv5869052,essv5875505,essv5878194,essv5890825,essv5891034,essv5893770,essv5893861,essv5895777,essv5896668,essv5898796,essv5899267,essv5904263,essv5906920,essv5907508,essv5910785,essv5912437,essv5912479,essv5913453,essv5915770,essv5918835,essv5921357,essv5924521,essv5928482,essv5929203,essv5929348,essv5935603,essv5944221,essv5945472,essv5951358,essv5954480,essv5957593,essv5962761,essv5965560,essv5965992,essv5966983,essv5969130,essv5979194,essv5982590,essv5985580,essv5994376,essv5995042,essv5996953,essv5997070,essv5997269,essv6003240,essv6009364,essv6010568,essv6016530,essv6017543,essv6020974,essv6023067,essv6025859,essv6027374,essv6028525,essv6028850,essv6029670,essv6035403,essv6041414,essv6043574,essv6047266,essv6051652,essv6056868,essv6057477,essv6059076,essv6059706,essv6061978,essv6062470,essv6064594,essv6069551,essv6071298,essv6074675,essv6075567,essv6079485,essv6079552,essv6081983,essv6083586,essv6085222,essv6087893,essv6088168,essv6089632,essv6090651,essv6096167,essv6097870,essv6103358,essv6107651,essv6112486,essv6120270,essv6123083,essv6124221,essv6124274,essv6129225,essv6135267,essv6138939,essv6139442,essv6141935,essv6150690,essv6150955,essv6153588,essv6158664,essv6164704,essv6166535,essv6174985,essv6178123,essv6178908,essv6181482,essv6182430,essv6188176,essv6192928,essv6193962,essv6195869,essv6200401,essv6208177,essv6215307,essv6223844,essv6231796,essv6232842,essv6233318,essv6239650,essv6240356,essv6248812,essv6250047,essv6276334,essv6277988,essv6278895,essv6282062,essv6282586,essv6283295,essv6285915,essv6286314,essv6287666,essv6288601,essv6289370,essv6289495,essv6296610,essv6302425,essv6303278,essv6303811,essv6304212,essv6304341,essv6304368,essv6316689,essv6320529,essv6320741,essv6324571,essv6325314,essv6329132,essv6345432,essv6347902,essv6352766,essv6357511,essv6358698,essv6359035,essv6360480,essv6365732,essv6366191,essv6370344,essv6371236,essv6374716,essv6382314,essv6382925,essv6386009,essv6386313,essv6390027,essv6390650,essv6393805,essv6407852,essv6409577,essv6414549,essv6416709,essv6418922,essv6423304,essv6424164,essv6425321,essv6426326,essv6427134,essv6427320,essv6430296,essv6435010,essv6444118,essv6444702,essv6448555,essv6451584,essv6452183,essv6453170,essv6453260,essv6453878,essv6455744,essv6455860,essv6459210,essv6462531,essv6471882,essv6472809,essv6474145,essv6474271,essv6476173,essv6484674,essv6488904,essv6494449,essv6496407,essv6496876,essv6499626,essv6500333,essv6500485,essv6501274,essv6501835,essv6503602,essv6503607,essv6505896,essv6507030,essv6508860,essv6511759,essv6517932,essv6525387,essv6531586,essv6533516,essv6535176,essv6540235,essv6546084,essv6548915,essv6553706,essv6557510,essv6560103,essv6566499,essv6567597,essv6567925,essv6568335,essv6570143,essv6576278,essv6577574,essv6583551,essv6584130,essv6589446,essv6592379,essv6594821;num_studies=4;studies=1000GenomesPhase1,Wang2008,Boomsma2014,Ahn2009;num_platforms=3;platforms=Illumina_GA,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=384;samples=NA19779,NA19776,NA20765,NA19469,HG00271,HG00373,NA19350,HG00421,HG00543,NA19359,NA18550,NA18552,NA18555,NA18557,NA18559,NA18558,HG01334,NA11829,NA06986,NA18488,HG01515,NA19072,HG01069,NA18609,NA11918,HG00285,NA18951,NA18953,HG01167,NA12891,NA19328,NA19321,NA19327,HG00237,HG00583,NA19152,NA19153,NA19257,HG00179,NA19159,NA19747,HG01491,HG00542,NA18619,NA19732,NA18608,HG00512,NA18603,NA18605,NA18606,YH,NA20585,HG01465,NA18517,NA18516,NA20127,NA18510,NA20534,NA20536,NA20537,NA18924,NA20756,NA18991,NA18990,NA07048,NA11920,NA19160,NA18861,NA18868,HG00705,HG00684,HG00707,NA18909,NA18907,HG00708,NA19119,NA19448,NA19449,NA19444,NA19445,NA19446,NA19440,NA19114,NA19443,NA19663,NA19703,NA19701,NA07347,NA19704,HG00345,HG01384,NA19207,NA19204,NA19200,NA19201,NA12776,NA19209,NA06994,NA18548,NA18549,NA18546,NA18547,NA18544,NA18545,NA18542,NA18543,NA18541,NA19385,NA19383,NA19382,NA19381,NA19380,NA18498,HG01075,HG01378,NA19066,NA19065,HG01079,HG01374,HG01354,HG01357,HG00671,HG00672,HG01204,NA20276,NA18942,NA18940,NA18941,NA18947,NA18944,NA18945,NA19401,NA19403,NA19404,NA12813,NA19239,NA19238,NA19236,HG01190,NA19625,HG00732,HG01108,HG00590,HG01101,HG00692,HG00690,NA19240,HG00699,NA11894,NA19055,NA19054,NA19835,NA19834,NA18617,NA18614,NA18615,NA18599,HG00252,NA18611,NA18597,NA18596,HG00313,NA18618,NA18592,NA19334,NA19332,HG00524,NA19331,NA19355,NA19338,NA18577,NA18574,NA18573,NA18572,HG00736,NA18579,HG00566,NA19670,NA19909,HG00137,NA18502,NA18504,NA18505,NA18508,sample_essv9760617,NA20507,NA18986,NA18987,NA18985,NA18982,NA18981,NA12827,NA20291,HG00625,HG00628,HG00629,NA12383,HG00140,NA11933,NA19171,NA19172,NA18870,NA12761,NA18973,NA18972,NA18971,NA18976,NA18975,NA18974,NA19471,NA19473,NA19472,NA19474,NA19654,NA19711,NA19712,NA19713,NA19716,NA19782,NA19780,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19375,NA19005,NA18539,NA18532,NA18530,NA18537,NA18534,NA19394,NA19395,NA19396,NA19397,NA19390,NA19391,NA19393,NA19398,NA19129,NA19099,NA19098,NA18627,NA18623,NA18622,HG01366,NA20317,HG00662,NA12348,NA20796,NA19438,NA19435,NA19434,NA19437,NA19436,NA19431,HG00610,NA19189,NA19223,HG00442,HG00448,HG00449,NA19130,NA19131,HG00683,NA19138,HG00689,NA19700,NA19985,NA19982,HG01360,HG00254,NA12043,NA18612,NA18613,NA18582,HG00249,HG00437,HG00436,NA19347,NA18621,NA12717,NA12716,HG00534,HG00533,HG00531,NA18564,NA18566,NA18560,NA18561,NA18562,NA18563,NA11831,NA11830,NA19917,NA19914,HG00258,HG00525,HG01254,NA20774,HG00654,NA20287,NA20282,HG00159,HG00154,NA20356,NA19144,NA19147,HG01170,NA19466,NA19467,NA19461,NA18960,NA18961,NA18964,NA18965,NA19468,NA18967,NA12282,NA12287,NA19318,NA19319,NA19316,NA19311,NA19312,NA19313,NA11994,NA12750,NA19360,HG00479,HG00478,HG00472,HG00557,HG00476,HG00475,NA18520,NA18523,NA18526,HG01488,NA19818,HG00335,NA12155,HG01351,HG01350,NA19010,NA19726,NA19720,NA19722,NA18634,NA18630,NA18632,SJK,NA18917,NA19920,NA20529,NA20525,NA12489,NA19428,NA19429,HG00608,NA12249,NA12878,NA18968,NA19190,NA19197,NA19210,NA19198,NA19455,HG01083,NA18858,NA18910,NA12414,NA18916,NA18853,NA18856,NA19108,NA19457,NA19107,HG00734,NA19452,NA19451,NA19102;num_samples_tested=1824;frequency=21.05%;num_unique_samples_tested=1824;nr_frequency=21.05%;PopulationSummary=European 60:Asian 134:Mexican 13:African 151:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 26:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2911535	2911850	.	.	.	ID=gssv602;Name=gssv602;variant_type=CNV;variant_sub_type=Loss;outer_start=2911489;inner_start=2911535;inner_end=2911850;outer_end=2911934;inner_rank=8;num_variants=384;variants=essv27296,essv29735,essv9760617,essv5399971,essv5404463,essv5414063,essv5414557,essv5428152,essv5429758,essv5431123,essv5432275,essv5432906,essv5433339,essv5435381,essv5435936,essv5443311,essv5447486,essv5447744,essv5447805,essv5454994,essv5458624,essv5461812,essv5465497,essv5469348,essv5469481,essv5474192,essv5476202,essv5477946,essv5480759,essv5486533,essv5489110,essv5489245,essv5490928,essv5490976,essv5500985,essv5502157,essv5504884,essv5507776,essv5509926,essv5512415,essv5514647,essv5522431,essv5522718,essv5529389,essv5530400,essv5531187,essv5536256,essv5539004,essv5543551,essv5551330,essv5553306,essv5554599,essv5557036,essv5558327,essv5564212,essv5572191,essv5572810,essv5574767,essv5575340,essv5577290,essv5580301,essv5584890,essv5589478,essv5592265,essv5596378,essv5597447,essv5599481,essv5599535,essv5600500,essv5612072,essv5614234,essv5614898,essv5624718,essv5629229,essv5631767,essv5633640,essv5634505,essv5636136,essv5637052,essv5639321,essv5642245,essv5642484,essv5643554,essv5647612,essv5647681,essv5650561,essv5656032,essv5661341,essv5671053,essv5672362,essv5673315,essv5673991,essv5677856,essv5684112,essv5685298,essv5688414,essv5691096,essv5691787,essv5693233,essv5697903,essv5699555,essv5701034,essv5701686,essv5704851,essv5708533,essv5708654,essv5712060,essv5714971,essv5716623,essv5717384,essv5717642,essv5719282,essv5719839,essv5720133,essv5725070,essv5726003,essv5729242,essv5731720,essv5741322,essv5742756,essv5750076,essv5752055,essv5755211,essv5758043,essv5761784,essv5771748,essv5774344,essv5777985,essv5778284,essv5778444,essv5778612,essv5786723,essv5788490,essv5792620,essv5794795,essv5800077,essv5803288,essv5824283,essv5826988,essv5827690,essv5831713,essv5841860,essv5843227,essv5855943,essv5856474,essv5856810,essv5857475,essv5858963,essv5865000,essv5866133,essv5869052,essv5875505,essv5878194,essv5890825,essv5891034,essv5893770,essv5893861,essv5895777,essv5896668,essv5898796,essv5899267,essv5904263,essv5906920,essv5907508,essv5910785,essv5912437,essv5912479,essv5913453,essv5915770,essv5918835,essv5921357,essv5924521,essv5928482,essv5929203,essv5929348,essv5935603,essv5944221,essv5945472,essv5951358,essv5954480,essv5957593,essv5962761,essv5965560,essv5965992,essv5966983,essv5969130,essv5979194,essv5982590,essv5985580,essv5994376,essv5995042,essv5996953,essv5997070,essv5997269,essv6003240,essv6009364,essv6010568,essv6016530,essv6017543,essv6020974,essv6023067,essv6025859,essv6027374,essv6028525,essv6028850,essv6029670,essv6035403,essv6041414,essv6043574,essv6047266,essv6051652,essv6056868,essv6057477,essv6059076,essv6059706,essv6061978,essv6062470,essv6064594,essv6069551,essv6071298,essv6074675,essv6075567,essv6079485,essv6079552,essv6081983,essv6083586,essv6085222,essv6087893,essv6088168,essv6089632,essv6090651,essv6096167,essv6097870,essv6103358,essv6107651,essv6112486,essv6120270,essv6123083,essv6124221,essv6124274,essv6129225,essv6135267,essv6138939,essv6139442,essv6141935,essv6150690,essv6150955,essv6153588,essv6158664,essv6164704,essv6166535,essv6174985,essv6178123,essv6178908,essv6181482,essv6182430,essv6188176,essv6192928,essv6193962,essv6195869,essv6200401,essv6208177,essv6215307,essv6223844,essv6231796,essv6232842,essv6233318,essv6239650,essv6240356,essv6248812,essv6250047,essv6276334,essv6277988,essv6278895,essv6282062,essv6282586,essv6283295,essv6285915,essv6286314,essv6287666,essv6288601,essv6289370,essv6289495,essv6296610,essv6302425,essv6303278,essv6303811,essv6304212,essv6304341,essv6304368,essv6316689,essv6320529,essv6320741,essv6324571,essv6325314,essv6329132,essv6345432,essv6347902,essv6352766,essv6357511,essv6358698,essv6359035,essv6360480,essv6365732,essv6366191,essv6370344,essv6371236,essv6374716,essv6382314,essv6382925,essv6386009,essv6386313,essv6390027,essv6390650,essv6393805,essv6407852,essv6409577,essv6414549,essv6416709,essv6418922,essv6423304,essv6424164,essv6425321,essv6426326,essv6427134,essv6427320,essv6430296,essv6435010,essv6444118,essv6444702,essv6448555,essv6451584,essv6452183,essv6453170,essv6453260,essv6453878,essv6455744,essv6455860,essv6459210,essv6462531,essv6471882,essv6472809,essv6474145,essv6474271,essv6476173,essv6484674,essv6488904,essv6494449,essv6496407,essv6496876,essv6499626,essv6500333,essv6500485,essv6501274,essv6501835,essv6503602,essv6503607,essv6505896,essv6507030,essv6508860,essv6511759,essv6517932,essv6525387,essv6531586,essv6533516,essv6535176,essv6540235,essv6546084,essv6548915,essv6553706,essv6557510,essv6560103,essv6566499,essv6567597,essv6567925,essv6568335,essv6570143,essv6576278,essv6577574,essv6583551,essv6584130,essv6589446,essv6592379,essv6594821;num_studies=4;studies=1000GenomesPhase1,Wang2008,Boomsma2014,Ahn2009;num_platforms=3;platforms=Illumina_GA,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=384;samples=NA19779,NA19776,NA20765,NA19469,HG00271,HG00373,NA19350,HG00421,HG00543,NA19359,NA18550,NA18552,NA18555,NA18557,NA18559,NA18558,HG01334,NA11829,NA06986,NA18488,HG01515,NA19072,HG01069,NA18609,NA11918,HG00285,NA18951,NA18953,HG01167,NA12891,NA19328,NA19321,NA19327,HG00237,HG00583,NA19152,NA19153,NA19257,HG00179,NA19159,NA19747,HG01491,HG00542,NA18619,NA19732,NA18608,HG00512,NA18603,NA18605,NA18606,YH,NA20585,HG01465,NA18517,NA18516,NA20127,NA18510,NA20534,NA20536,NA20537,NA18924,NA20756,NA18991,NA18990,NA07048,NA11920,NA19160,NA18861,NA18868,HG00705,HG00684,HG00707,NA18909,NA18907,HG00708,NA19119,NA19448,NA19449,NA19444,NA19445,NA19446,NA19440,NA19114,NA19443,NA19663,NA19703,NA19701,NA07347,NA19704,HG00345,HG01384,NA19207,NA19204,NA19200,NA19201,NA12776,NA19209,NA06994,NA18548,NA18549,NA18546,NA18547,NA18544,NA18545,NA18542,NA18543,NA18541,NA19385,NA19383,NA19382,NA19381,NA19380,NA18498,HG01075,HG01378,NA19066,NA19065,HG01079,HG01374,HG01354,HG01357,HG00671,HG00672,HG01204,NA20276,NA18942,NA18940,NA18941,NA18947,NA18944,NA18945,NA19401,NA19403,NA19404,NA12813,NA19239,NA19238,NA19236,HG01190,NA19625,HG00732,HG01108,HG00590,HG01101,HG00692,HG00690,NA19240,HG00699,NA11894,NA19055,NA19054,NA19835,NA19834,NA18617,NA18614,NA18615,NA18599,HG00252,NA18611,NA18597,NA18596,HG00313,NA18618,NA18592,NA19334,NA19332,HG00524,NA19331,NA19355,NA19338,NA18577,NA18574,NA18573,NA18572,HG00736,NA18579,HG00566,NA19670,NA19909,HG00137,NA18502,NA18504,NA18505,NA18508,sample_essv9760617,NA20507,NA18986,NA18987,NA18985,NA18982,NA18981,NA12827,NA20291,HG00625,HG00628,HG00629,NA12383,HG00140,NA11933,NA19171,NA19172,NA18870,NA12761,NA18973,NA18972,NA18971,NA18976,NA18975,NA18974,NA19471,NA19473,NA19472,NA19474,NA19654,NA19711,NA19712,NA19713,NA19716,NA19782,NA19780,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19375,NA19005,NA18539,NA18532,NA18530,NA18537,NA18534,NA19394,NA19395,NA19396,NA19397,NA19390,NA19391,NA19393,NA19398,NA19129,NA19099,NA19098,NA18627,NA18623,NA18622,HG01366,NA20317,HG00662,NA12348,NA20796,NA19438,NA19435,NA19434,NA19437,NA19436,NA19431,HG00610,NA19189,NA19223,HG00442,HG00448,HG00449,NA19130,NA19131,HG00683,NA19138,HG00689,NA19700,NA19985,NA19982,HG01360,HG00254,NA12043,NA18612,NA18613,NA18582,HG00249,HG00437,HG00436,NA19347,NA18621,NA12717,NA12716,HG00534,HG00533,HG00531,NA18564,NA18566,NA18560,NA18561,NA18562,NA18563,NA11831,NA11830,NA19917,NA19914,HG00258,HG00525,HG01254,NA20774,HG00654,NA20287,NA20282,HG00159,HG00154,NA20356,NA19144,NA19147,HG01170,NA19466,NA19467,NA19461,NA18960,NA18961,NA18964,NA18965,NA19468,NA18967,NA12282,NA12287,NA19318,NA19319,NA19316,NA19311,NA19312,NA19313,NA11994,NA12750,NA19360,HG00479,HG00478,HG00472,HG00557,HG00476,HG00475,NA18520,NA18523,NA18526,HG01488,NA19818,HG00335,NA12155,HG01351,HG01350,NA19010,NA19726,NA19720,NA19722,NA18634,NA18630,NA18632,SJK,NA18917,NA19920,NA20529,NA20525,NA12489,NA19428,NA19429,HG00608,NA12249,NA12878,NA18968,NA19190,NA19197,NA19210,NA19198,NA19455,HG01083,NA18858,NA18910,NA12414,NA18916,NA18853,NA18856,NA19108,NA19457,NA19107,HG00734,NA19452,NA19451,NA19102;num_samples_tested=1824;frequency=21.05%;num_unique_samples_tested=1824;nr_frequency=21.05%;PopulationSummary=European 60:Asian 134:Mexican 13:African 151:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 26:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2911934	2911934	.	.	.	ID=gssv602;Name=gssv602;variant_type=CNV;variant_sub_type=Loss;outer_start=2911489;inner_start=2911535;inner_end=2911850;outer_end=2911934;inner_rank=8;num_variants=384;variants=essv27296,essv29735,essv9760617,essv5399971,essv5404463,essv5414063,essv5414557,essv5428152,essv5429758,essv5431123,essv5432275,essv5432906,essv5433339,essv5435381,essv5435936,essv5443311,essv5447486,essv5447744,essv5447805,essv5454994,essv5458624,essv5461812,essv5465497,essv5469348,essv5469481,essv5474192,essv5476202,essv5477946,essv5480759,essv5486533,essv5489110,essv5489245,essv5490928,essv5490976,essv5500985,essv5502157,essv5504884,essv5507776,essv5509926,essv5512415,essv5514647,essv5522431,essv5522718,essv5529389,essv5530400,essv5531187,essv5536256,essv5539004,essv5543551,essv5551330,essv5553306,essv5554599,essv5557036,essv5558327,essv5564212,essv5572191,essv5572810,essv5574767,essv5575340,essv5577290,essv5580301,essv5584890,essv5589478,essv5592265,essv5596378,essv5597447,essv5599481,essv5599535,essv5600500,essv5612072,essv5614234,essv5614898,essv5624718,essv5629229,essv5631767,essv5633640,essv5634505,essv5636136,essv5637052,essv5639321,essv5642245,essv5642484,essv5643554,essv5647612,essv5647681,essv5650561,essv5656032,essv5661341,essv5671053,essv5672362,essv5673315,essv5673991,essv5677856,essv5684112,essv5685298,essv5688414,essv5691096,essv5691787,essv5693233,essv5697903,essv5699555,essv5701034,essv5701686,essv5704851,essv5708533,essv5708654,essv5712060,essv5714971,essv5716623,essv5717384,essv5717642,essv5719282,essv5719839,essv5720133,essv5725070,essv5726003,essv5729242,essv5731720,essv5741322,essv5742756,essv5750076,essv5752055,essv5755211,essv5758043,essv5761784,essv5771748,essv5774344,essv5777985,essv5778284,essv5778444,essv5778612,essv5786723,essv5788490,essv5792620,essv5794795,essv5800077,essv5803288,essv5824283,essv5826988,essv5827690,essv5831713,essv5841860,essv5843227,essv5855943,essv5856474,essv5856810,essv5857475,essv5858963,essv5865000,essv5866133,essv5869052,essv5875505,essv5878194,essv5890825,essv5891034,essv5893770,essv5893861,essv5895777,essv5896668,essv5898796,essv5899267,essv5904263,essv5906920,essv5907508,essv5910785,essv5912437,essv5912479,essv5913453,essv5915770,essv5918835,essv5921357,essv5924521,essv5928482,essv5929203,essv5929348,essv5935603,essv5944221,essv5945472,essv5951358,essv5954480,essv5957593,essv5962761,essv5965560,essv5965992,essv5966983,essv5969130,essv5979194,essv5982590,essv5985580,essv5994376,essv5995042,essv5996953,essv5997070,essv5997269,essv6003240,essv6009364,essv6010568,essv6016530,essv6017543,essv6020974,essv6023067,essv6025859,essv6027374,essv6028525,essv6028850,essv6029670,essv6035403,essv6041414,essv6043574,essv6047266,essv6051652,essv6056868,essv6057477,essv6059076,essv6059706,essv6061978,essv6062470,essv6064594,essv6069551,essv6071298,essv6074675,essv6075567,essv6079485,essv6079552,essv6081983,essv6083586,essv6085222,essv6087893,essv6088168,essv6089632,essv6090651,essv6096167,essv6097870,essv6103358,essv6107651,essv6112486,essv6120270,essv6123083,essv6124221,essv6124274,essv6129225,essv6135267,essv6138939,essv6139442,essv6141935,essv6150690,essv6150955,essv6153588,essv6158664,essv6164704,essv6166535,essv6174985,essv6178123,essv6178908,essv6181482,essv6182430,essv6188176,essv6192928,essv6193962,essv6195869,essv6200401,essv6208177,essv6215307,essv6223844,essv6231796,essv6232842,essv6233318,essv6239650,essv6240356,essv6248812,essv6250047,essv6276334,essv6277988,essv6278895,essv6282062,essv6282586,essv6283295,essv6285915,essv6286314,essv6287666,essv6288601,essv6289370,essv6289495,essv6296610,essv6302425,essv6303278,essv6303811,essv6304212,essv6304341,essv6304368,essv6316689,essv6320529,essv6320741,essv6324571,essv6325314,essv6329132,essv6345432,essv6347902,essv6352766,essv6357511,essv6358698,essv6359035,essv6360480,essv6365732,essv6366191,essv6370344,essv6371236,essv6374716,essv6382314,essv6382925,essv6386009,essv6386313,essv6390027,essv6390650,essv6393805,essv6407852,essv6409577,essv6414549,essv6416709,essv6418922,essv6423304,essv6424164,essv6425321,essv6426326,essv6427134,essv6427320,essv6430296,essv6435010,essv6444118,essv6444702,essv6448555,essv6451584,essv6452183,essv6453170,essv6453260,essv6453878,essv6455744,essv6455860,essv6459210,essv6462531,essv6471882,essv6472809,essv6474145,essv6474271,essv6476173,essv6484674,essv6488904,essv6494449,essv6496407,essv6496876,essv6499626,essv6500333,essv6500485,essv6501274,essv6501835,essv6503602,essv6503607,essv6505896,essv6507030,essv6508860,essv6511759,essv6517932,essv6525387,essv6531586,essv6533516,essv6535176,essv6540235,essv6546084,essv6548915,essv6553706,essv6557510,essv6560103,essv6566499,essv6567597,essv6567925,essv6568335,essv6570143,essv6576278,essv6577574,essv6583551,essv6584130,essv6589446,essv6592379,essv6594821;num_studies=4;studies=1000GenomesPhase1,Wang2008,Boomsma2014,Ahn2009;num_platforms=3;platforms=Illumina_GA,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=384;samples=NA19779,NA19776,NA20765,NA19469,HG00271,HG00373,NA19350,HG00421,HG00543,NA19359,NA18550,NA18552,NA18555,NA18557,NA18559,NA18558,HG01334,NA11829,NA06986,NA18488,HG01515,NA19072,HG01069,NA18609,NA11918,HG00285,NA18951,NA18953,HG01167,NA12891,NA19328,NA19321,NA19327,HG00237,HG00583,NA19152,NA19153,NA19257,HG00179,NA19159,NA19747,HG01491,HG00542,NA18619,NA19732,NA18608,HG00512,NA18603,NA18605,NA18606,YH,NA20585,HG01465,NA18517,NA18516,NA20127,NA18510,NA20534,NA20536,NA20537,NA18924,NA20756,NA18991,NA18990,NA07048,NA11920,NA19160,NA18861,NA18868,HG00705,HG00684,HG00707,NA18909,NA18907,HG00708,NA19119,NA19448,NA19449,NA19444,NA19445,NA19446,NA19440,NA19114,NA19443,NA19663,NA19703,NA19701,NA07347,NA19704,HG00345,HG01384,NA19207,NA19204,NA19200,NA19201,NA12776,NA19209,NA06994,NA18548,NA18549,NA18546,NA18547,NA18544,NA18545,NA18542,NA18543,NA18541,NA19385,NA19383,NA19382,NA19381,NA19380,NA18498,HG01075,HG01378,NA19066,NA19065,HG01079,HG01374,HG01354,HG01357,HG00671,HG00672,HG01204,NA20276,NA18942,NA18940,NA18941,NA18947,NA18944,NA18945,NA19401,NA19403,NA19404,NA12813,NA19239,NA19238,NA19236,HG01190,NA19625,HG00732,HG01108,HG00590,HG01101,HG00692,HG00690,NA19240,HG00699,NA11894,NA19055,NA19054,NA19835,NA19834,NA18617,NA18614,NA18615,NA18599,HG00252,NA18611,NA18597,NA18596,HG00313,NA18618,NA18592,NA19334,NA19332,HG00524,NA19331,NA19355,NA19338,NA18577,NA18574,NA18573,NA18572,HG00736,NA18579,HG00566,NA19670,NA19909,HG00137,NA18502,NA18504,NA18505,NA18508,sample_essv9760617,NA20507,NA18986,NA18987,NA18985,NA18982,NA18981,NA12827,NA20291,HG00625,HG00628,HG00629,NA12383,HG00140,NA11933,NA19171,NA19172,NA18870,NA12761,NA18973,NA18972,NA18971,NA18976,NA18975,NA18974,NA19471,NA19473,NA19472,NA19474,NA19654,NA19711,NA19712,NA19713,NA19716,NA19782,NA19780,NA19379,NA19372,NA19373,NA19371,NA19376,NA19377,NA19375,NA19005,NA18539,NA18532,NA18530,NA18537,NA18534,NA19394,NA19395,NA19396,NA19397,NA19390,NA19391,NA19393,NA19398,NA19129,NA19099,NA19098,NA18627,NA18623,NA18622,HG01366,NA20317,HG00662,NA12348,NA20796,NA19438,NA19435,NA19434,NA19437,NA19436,NA19431,HG00610,NA19189,NA19223,HG00442,HG00448,HG00449,NA19130,NA19131,HG00683,NA19138,HG00689,NA19700,NA19985,NA19982,HG01360,HG00254,NA12043,NA18612,NA18613,NA18582,HG00249,HG00437,HG00436,NA19347,NA18621,NA12717,NA12716,HG00534,HG00533,HG00531,NA18564,NA18566,NA18560,NA18561,NA18562,NA18563,NA11831,NA11830,NA19917,NA19914,HG00258,HG00525,HG01254,NA20774,HG00654,NA20287,NA20282,HG00159,HG00154,NA20356,NA19144,NA19147,HG01170,NA19466,NA19467,NA19461,NA18960,NA18961,NA18964,NA18965,NA19468,NA18967,NA12282,NA12287,NA19318,NA19319,NA19316,NA19311,NA19312,NA19313,NA11994,NA12750,NA19360,HG00479,HG00478,HG00472,HG00557,HG00476,HG00475,NA18520,NA18523,NA18526,HG01488,NA19818,HG00335,NA12155,HG01351,HG01350,NA19010,NA19726,NA19720,NA19722,NA18634,NA18630,NA18632,SJK,NA18917,NA19920,NA20529,NA20525,NA12489,NA19428,NA19429,HG00608,NA12249,NA12878,NA18968,NA19190,NA19197,NA19210,NA19198,NA19455,HG01083,NA18858,NA18910,NA12414,NA18916,NA18853,NA18856,NA19108,NA19457,NA19107,HG00734,NA19452,NA19451,NA19102;num_samples_tested=1824;frequency=21.05%;num_unique_samples_tested=1824;nr_frequency=21.05%;PopulationSummary=European 60:Asian 134:Mexican 13:African 151:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 26:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2566195	2566195	.	.	.	ID=gssv605;Name=gssv605;variant_type=CNV;variant_sub_type=Loss;outer_start=2566195;inner_start=2566195;inner_end=2566623;outer_end=2566635;inner_rank=8;num_variants=114;variants=essv5411742,essv5415958,essv5433007,essv5462610,essv5463132,essv5471160,essv5481367,essv5483427,essv5484855,essv5501129,essv5502647,essv5517716,essv5522908,essv5539969,essv5546957,essv5552992,essv5558599,essv5568489,essv5601616,essv5607775,essv5608652,essv5639073,essv5655408,essv5659713,essv5666396,essv5679435,essv5690458,essv5693082,essv5702203,essv5711594,essv5713670,essv5716031,essv5721497,essv5741752,essv5752773,essv5759687,essv5771945,essv5774401,essv5788468,essv5790573,essv5796693,essv5814263,essv5816058,essv5837505,essv5838103,essv5842808,essv5861950,essv5884891,essv5897265,essv5900200,essv5936146,essv5938131,essv5946004,essv5972540,essv5980680,essv5997909,essv6000041,essv6016573,essv6025747,essv6034164,essv6039374,essv6041178,essv6059728,essv6068516,essv6075008,essv6078969,essv6081713,essv6083878,essv6088009,essv6090000,essv6090582,essv6109200,essv6115352,essv6132494,essv6144433,essv6160881,essv6162007,essv6169480,essv6169758,essv6204263,essv6217295,essv6230234,essv6237014,essv6273379,essv6289413,essv6328384,essv6331001,essv6339798,essv6351205,essv6363573,essv6363658,essv6368487,essv6370619,essv6376974,essv6393770,essv6394674,essv6431904,essv6443064,essv6451395,essv6483210,essv6488723,essv6489999,essv6517570,essv6519108,essv6520633,essv6521997,essv6526087,essv6529647,essv6541573,essv6558785,essv6568242,essv6588197,essv6594080,essv9759728;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=114;samples=NA19676,NA19675,NA12829,NA20768,HG00654,NA18566,NA19678,HG01441,NA07051,NA20299,NA20516,NA19130,HG00275,NA19685,NA20341,HG01521,NA19443,NA11930,NA18550,NA20778,NA19663,NA19703,NA12830,HG01140,HG00346,HG00342,NA18489,HG00152,HG01066,NA12778,NA20356,HG01069,NA19818,NA18542,NA19463,sample_essv9759728,NA19468,NA19372,NA12282,NA19377,HG00284,HG00285,HG00704,NA19315,NA19317,NA19313,NA19394,HG00174,NA19403,NA19399,NA20795,HG00313,HG00328,HG00478,HG01047,NA19093,NA18520,HG00103,HG00237,HG00100,HG00232,HG00108,HG01354,HG00336,HG01356,HG00331,NA12748,HG01359,HG00180,NA19625,HG00111,HG00112,NA20819,NA20818,HG00543,HG01055,NA19439,NA19438,NA19920,HG00613,HG00610,HG00693,HG00692,HG00512,NA20525,NA20582,NA12154,HG00123,NA18616,NA18612,HG00250,HG01461,HG01134,HG01136,HG00684,HG01334,NA19331,NA20530,NA20757,HG00236,NA19213,NA18579,HG01124,HG00133,HG00136,HG00137,HG01082,HG00369,HG00243,NA20332,NA12717,NA19455,HG00734,NA19102;num_samples_tested=1822;frequency=6.26%;num_unique_samples_tested=1822;nr_frequency=6.25%;PopulationSummary=European 49:Asian 16:Mexican 5:African 29:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 15:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2566195	2566623	.	.	.	ID=gssv605;Name=gssv605;variant_type=CNV;variant_sub_type=Loss;outer_start=2566195;inner_start=2566195;inner_end=2566623;outer_end=2566635;inner_rank=8;num_variants=114;variants=essv5411742,essv5415958,essv5433007,essv5462610,essv5463132,essv5471160,essv5481367,essv5483427,essv5484855,essv5501129,essv5502647,essv5517716,essv5522908,essv5539969,essv5546957,essv5552992,essv5558599,essv5568489,essv5601616,essv5607775,essv5608652,essv5639073,essv5655408,essv5659713,essv5666396,essv5679435,essv5690458,essv5693082,essv5702203,essv5711594,essv5713670,essv5716031,essv5721497,essv5741752,essv5752773,essv5759687,essv5771945,essv5774401,essv5788468,essv5790573,essv5796693,essv5814263,essv5816058,essv5837505,essv5838103,essv5842808,essv5861950,essv5884891,essv5897265,essv5900200,essv5936146,essv5938131,essv5946004,essv5972540,essv5980680,essv5997909,essv6000041,essv6016573,essv6025747,essv6034164,essv6039374,essv6041178,essv6059728,essv6068516,essv6075008,essv6078969,essv6081713,essv6083878,essv6088009,essv6090000,essv6090582,essv6109200,essv6115352,essv6132494,essv6144433,essv6160881,essv6162007,essv6169480,essv6169758,essv6204263,essv6217295,essv6230234,essv6237014,essv6273379,essv6289413,essv6328384,essv6331001,essv6339798,essv6351205,essv6363573,essv6363658,essv6368487,essv6370619,essv6376974,essv6393770,essv6394674,essv6431904,essv6443064,essv6451395,essv6483210,essv6488723,essv6489999,essv6517570,essv6519108,essv6520633,essv6521997,essv6526087,essv6529647,essv6541573,essv6558785,essv6568242,essv6588197,essv6594080,essv9759728;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=114;samples=NA19676,NA19675,NA12829,NA20768,HG00654,NA18566,NA19678,HG01441,NA07051,NA20299,NA20516,NA19130,HG00275,NA19685,NA20341,HG01521,NA19443,NA11930,NA18550,NA20778,NA19663,NA19703,NA12830,HG01140,HG00346,HG00342,NA18489,HG00152,HG01066,NA12778,NA20356,HG01069,NA19818,NA18542,NA19463,sample_essv9759728,NA19468,NA19372,NA12282,NA19377,HG00284,HG00285,HG00704,NA19315,NA19317,NA19313,NA19394,HG00174,NA19403,NA19399,NA20795,HG00313,HG00328,HG00478,HG01047,NA19093,NA18520,HG00103,HG00237,HG00100,HG00232,HG00108,HG01354,HG00336,HG01356,HG00331,NA12748,HG01359,HG00180,NA19625,HG00111,HG00112,NA20819,NA20818,HG00543,HG01055,NA19439,NA19438,NA19920,HG00613,HG00610,HG00693,HG00692,HG00512,NA20525,NA20582,NA12154,HG00123,NA18616,NA18612,HG00250,HG01461,HG01134,HG01136,HG00684,HG01334,NA19331,NA20530,NA20757,HG00236,NA19213,NA18579,HG01124,HG00133,HG00136,HG00137,HG01082,HG00369,HG00243,NA20332,NA12717,NA19455,HG00734,NA19102;num_samples_tested=1822;frequency=6.26%;num_unique_samples_tested=1822;nr_frequency=6.25%;PopulationSummary=European 49:Asian 16:Mexican 5:African 29:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 15:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2566635	2566635	.	.	.	ID=gssv605;Name=gssv605;variant_type=CNV;variant_sub_type=Loss;outer_start=2566195;inner_start=2566195;inner_end=2566623;outer_end=2566635;inner_rank=8;num_variants=114;variants=essv5411742,essv5415958,essv5433007,essv5462610,essv5463132,essv5471160,essv5481367,essv5483427,essv5484855,essv5501129,essv5502647,essv5517716,essv5522908,essv5539969,essv5546957,essv5552992,essv5558599,essv5568489,essv5601616,essv5607775,essv5608652,essv5639073,essv5655408,essv5659713,essv5666396,essv5679435,essv5690458,essv5693082,essv5702203,essv5711594,essv5713670,essv5716031,essv5721497,essv5741752,essv5752773,essv5759687,essv5771945,essv5774401,essv5788468,essv5790573,essv5796693,essv5814263,essv5816058,essv5837505,essv5838103,essv5842808,essv5861950,essv5884891,essv5897265,essv5900200,essv5936146,essv5938131,essv5946004,essv5972540,essv5980680,essv5997909,essv6000041,essv6016573,essv6025747,essv6034164,essv6039374,essv6041178,essv6059728,essv6068516,essv6075008,essv6078969,essv6081713,essv6083878,essv6088009,essv6090000,essv6090582,essv6109200,essv6115352,essv6132494,essv6144433,essv6160881,essv6162007,essv6169480,essv6169758,essv6204263,essv6217295,essv6230234,essv6237014,essv6273379,essv6289413,essv6328384,essv6331001,essv6339798,essv6351205,essv6363573,essv6363658,essv6368487,essv6370619,essv6376974,essv6393770,essv6394674,essv6431904,essv6443064,essv6451395,essv6483210,essv6488723,essv6489999,essv6517570,essv6519108,essv6520633,essv6521997,essv6526087,essv6529647,essv6541573,essv6558785,essv6568242,essv6588197,essv6594080,essv9759728;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=114;samples=NA19676,NA19675,NA12829,NA20768,HG00654,NA18566,NA19678,HG01441,NA07051,NA20299,NA20516,NA19130,HG00275,NA19685,NA20341,HG01521,NA19443,NA11930,NA18550,NA20778,NA19663,NA19703,NA12830,HG01140,HG00346,HG00342,NA18489,HG00152,HG01066,NA12778,NA20356,HG01069,NA19818,NA18542,NA19463,sample_essv9759728,NA19468,NA19372,NA12282,NA19377,HG00284,HG00285,HG00704,NA19315,NA19317,NA19313,NA19394,HG00174,NA19403,NA19399,NA20795,HG00313,HG00328,HG00478,HG01047,NA19093,NA18520,HG00103,HG00237,HG00100,HG00232,HG00108,HG01354,HG00336,HG01356,HG00331,NA12748,HG01359,HG00180,NA19625,HG00111,HG00112,NA20819,NA20818,HG00543,HG01055,NA19439,NA19438,NA19920,HG00613,HG00610,HG00693,HG00692,HG00512,NA20525,NA20582,NA12154,HG00123,NA18616,NA18612,HG00250,HG01461,HG01134,HG01136,HG00684,HG01334,NA19331,NA20530,NA20757,HG00236,NA19213,NA18579,HG01124,HG00133,HG00136,HG00137,HG01082,HG00369,HG00243,NA20332,NA12717,NA19455,HG00734,NA19102;num_samples_tested=1822;frequency=6.26%;num_unique_samples_tested=1822;nr_frequency=6.25%;PopulationSummary=European 49:Asian 16:Mexican 5:African 29:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 15:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4155097	4155097	.	.	.	ID=gssv609;Name=gssv609;variant_type=CNV;variant_sub_type=Loss;outer_start=4155097;inner_start=4155145;inner_end=4155460;outer_end=4155500;inner_rank=8;num_variants=500;variants=essv9763173,nssv3005185,essv5400647,essv5404760,essv5409673,essv5412231,essv5416350,essv5416954,essv5417753,essv5420359,essv5423090,essv5423894,essv5425839,essv5425928,essv5429972,essv5432076,essv5434883,essv5436195,essv5436209,essv5436690,essv5439720,essv5440445,essv5440623,essv5444318,essv5444651,essv5445907,essv5447402,essv5454654,essv5455457,essv5460664,essv5460824,essv5461293,essv5462278,essv5462741,essv5463504,essv5467145,essv5468302,essv5472316,essv5473701,essv5474602,essv5480437,essv5481254,essv5487258,essv5488685,essv5488708,essv5490043,essv5491401,essv5492376,essv5493486,essv5493619,essv5495316,essv5502153,essv5507486,essv5507771,essv5510387,essv5513721,essv5514146,essv5514413,essv5515568,essv5525436,essv5525642,essv5527706,essv5530755,essv5537723,essv5539220,essv5539881,essv5544138,essv5544662,essv5545113,essv5546711,essv5551978,essv5552172,essv5552684,essv5553553,essv5554398,essv5554740,essv5555798,essv5557671,essv5561679,essv5563752,essv5564291,essv5568383,essv5570050,essv5570464,essv5574495,essv5576029,essv5580054,essv5580077,essv5581861,essv5584199,essv5584652,essv5586893,essv5591604,essv5591860,essv5592072,essv5593100,essv5593442,essv5595811,essv5596636,essv5596722,essv5601001,essv5610594,essv5613485,essv5613942,essv5618172,essv5619817,essv5619959,essv5624570,essv5625067,essv5625809,essv5626489,essv5632950,essv5633885,essv5638599,essv5642732,essv5645667,essv5645674,essv5645752,essv5649371,essv5649593,essv5655150,essv5656859,essv5657182,essv5657760,essv5659417,essv5662498,essv5662536,essv5667647,essv5669178,essv5671159,essv5674114,essv5675048,essv5676682,essv5679696,essv5683739,essv5689998,essv5690829,essv5690906,essv5692571,essv5693520,essv5695013,essv5697605,essv5700429,essv5709559,essv5710458,essv5711005,essv5716477,essv5718527,essv5718766,essv5721676,essv5722186,essv5731908,essv5733440,essv5735011,essv5735936,essv5738061,essv5738329,essv5738540,essv5742053,essv5742125,essv5743495,essv5744657,essv5745115,essv5745546,essv5754352,essv5759384,essv5763684,essv5764782,essv5764796,essv5765320,essv5766200,essv5769643,essv5769818,essv5778315,essv5779445,essv5779455,essv5782772,essv5787329,essv5790800,essv5792661,essv5794764,essv5795580,essv5795700,essv5796023,essv5797462,essv5797735,essv5799845,essv5810987,essv5811643,essv5814062,essv5814097,essv5814198,essv5815861,essv5822662,essv5824039,essv5825090,essv5828050,essv5828845,essv5829028,essv5835084,essv5835270,essv5836794,essv5838549,essv5840392,essv5849778,essv5849868,essv5849907,essv5850246,essv5851281,essv5851499,essv5851870,essv5854357,essv5857215,essv5859917,essv5860012,essv5860078,essv5862358,essv5864085,essv5864499,essv5864800,essv5869603,essv5871249,essv5872828,essv5874014,essv5878980,essv5881248,essv5883312,essv5888174,essv5891153,essv5891577,essv5906556,essv5906743,essv5907229,essv5907886,essv5908317,essv5914215,essv5915358,essv5918981,essv5922256,essv5924139,essv5927617,essv5928753,essv5929321,essv5931393,essv5931499,essv5933179,essv5934353,essv5934874,essv5935568,essv5936481,essv5937739,essv5942658,essv5948978,essv5949633,essv5949728,essv5950218,essv5953199,essv5956536,essv5958282,essv5958672,essv5960624,essv5964268,essv5966344,essv5969913,essv5971923,essv5975240,essv5982823,essv5984015,essv5986805,essv5987438,essv5988594,essv5989382,essv5995758,essv5996809,essv5999238,essv6000843,essv6001124,essv6001636,essv6003159,essv6003168,essv6003735,essv6004457,essv6009282,essv6009350,essv6009645,essv6010525,essv6010927,essv6011822,essv6011900,essv6025572,essv6026602,essv6026626,essv6028267,essv6028911,essv6034621,essv6036697,essv6038483,essv6040550,essv6040682,essv6042936,essv6045932,essv6048564,essv6050377,essv6051382,essv6054367,essv6060093,essv6062496,essv6069086,essv6069255,essv6069405,essv6079631,essv6082581,essv6086033,essv6086340,essv6087791,essv6088219,essv6088301,essv6089500,essv6092118,essv6099027,essv6100412,essv6101480,essv6108426,essv6109964,essv6112515,essv6116518,essv6118494,essv6120348,essv6121569,essv6123322,essv6123979,essv6132364,essv6134085,essv6143554,essv6145633,essv6148691,essv6149254,essv6155237,essv6159333,essv6159535,essv6161799,essv6162983,essv6168254,essv6172272,essv6174952,essv6176070,essv6178006,essv6181254,essv6190853,essv6194290,essv6195976,essv6196148,essv6198656,essv6199612,essv6199654,essv6203294,essv6207058,essv6209196,essv6211474,essv6211677,essv6213691,essv6213962,essv6219195,essv6222095,essv6225461,essv6227312,essv6228607,essv6228892,essv6231357,essv6233458,essv6236443,essv6237314,essv6239144,essv6241220,essv6242330,essv6243065,essv6248593,essv6249042,essv6253377,essv6254490,essv6255646,essv6256649,essv6257016,essv6260502,essv6260811,essv6260930,essv6263061,essv6265616,essv6267344,essv6268208,essv6271856,essv6272544,essv6274740,essv6281010,essv6281240,essv6282481,essv6284332,essv6285170,essv6297843,essv6299436,essv6301110,essv6301949,essv6305227,essv6313715,essv6315089,essv6315836,essv6316905,essv6317148,essv6327230,essv6328172,essv6329663,essv6329900,essv6335322,essv6337110,essv6337571,essv6339112,essv6343326,essv6343669,essv6344031,essv6355014,essv6358413,essv6358726,essv6361757,essv6364771,essv6365285,essv6370681,essv6371379,essv6376492,essv6385060,essv6389276,essv6390173,essv6395431,essv6397348,essv6409615,essv6414649,essv6414749,essv6420096,essv6421277,essv6421493,essv6426524,essv6431479,essv6433499,essv6438894,essv6440640,essv6442475,essv6443566,essv6445846,essv6448732,essv6449283,essv6451822,essv6454762,essv6455316,essv6455508,essv6455651,essv6457412,essv6466324,essv6470268,essv6472399,essv6472934,essv6477362,essv6482512,essv6484139,essv6485976,essv6489344,essv6489866,essv6490815,essv6494614,essv6494997,essv6496217,essv6499923,essv6503444,essv6510565,essv6512049,essv6518642,essv6521397,essv6524458,essv6533852,essv6534190,essv6534486,essv6535724,essv6539504,essv6541439,essv6541718,essv6543566,essv6553473,essv6563655,essv6567490,essv6568262,essv6568831,essv6571288,essv6579998,essv6582880,essv6584811,essv6587724,essv6589774,essv6593631,essv6593647,essv6593828,essv6595989,essv29787;num_studies=4;studies=1000GenomesPhase1,Ahn2009,Boomsma2014,Dogan2014;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq,Illumina_GA;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=500;samples=NA18986,NA19779,NA07357,NA19777,NA18982,NA12058,NA19469,HG00273,HG00275,HG00276,HG00278,NA19670,HG00377,NA19350,NA19355,HG00422,NA19066,HG00428,NA18553,NA18558,HG01073,HG01455,NA06986,NA18487,NA18486,NA18489,NA19074,NA19077,NA19076,NA19070,HG01061,NA19072,NA19079,NA19078,HG01069,HG00613,HG00640,HG00160,HG00280,HG00282,NA11919,HG00285,HG00513,NA18956,NA18951,NA18950,NA18953,NA18952,NA18959,NA12891,HG00237,HG00239,HG00589,NA12748,HG00584,HG00583,HG01112,HG00581,HG01098,NA19152,NA19153,NA19257,NA19256,NA19159,HG01497,HG01491,HG01498,NA19359,HG01342,HG00306,HG00309,NA18608,HG01183,NA18603,NA20581,NA20582,NA07037,NA20586,HG01441,HG00124,HG01461,HG01465,NA18517,HG01334,NA18511,NA18510,NA20536,NA20537,NA18519,NA20533,NA20754,NA20759,NA18990,HG00638,NA18873,HG00634,NA20332,NA11920,NA19160,NA18867,NA18861,NA18868,HG01095,HG00705,NA19130,NA18908,NA18909,NA18907,HG00708,NA19684,NA19685,NA19119,NA19448,NA19449,NA19444,NA19445,NA19446,NA19116,NA19114,NA19443,NA19664,NA19660,NA19703,NA07346,NA19700,NA19707,NA19704,HG00345,HG00344,HG01384,HG00346,HG00343,HG00342,HG00264,HG00265,HG00263,NA19207,NA19204,NA19200,NA19201,NA19360,HG00556,NA19209,NA10851,NA19012,NA18548,NA19010,NA18547,NA18544,NA18545,NA19385,NA19384,NA19382,NA19381,NA19380,NA18499,NA19062,NA19063,HG01378,HG01070,NA19067,HG01072,NA19065,NA19068,HG01377,HG01375,HG01374,HG01354,HG01060,NA12155,HG00177,HG01356,NA07000,HG01437,HG01204,NA20276,NA18942,NA18943,NA18940,NA18941,NA18947,NA18944,NA18945,NA18948,NA18949,NA19401,NA19403,NA18508,HG00188,NA12813,HG00182,HG00180,HG00421,NA19239,NA19238,NA19235,NA19625,NA18934,HG01108,NA19729,HG01107,HG00590,HG01102,NA19248,HG00693,HG00692,HG00690,NA19129,NA19083,NA19058,NA11894,NA19057,NA11892,NA19055,NA19054,NA18516,NA19835,NA19834,HG00257,NA18615,HG00253,NA18613,HG00251,HG00319,NA18595,NA18596,NA18619,NA19334,NA18577,NA18574,NA18572,NA18571,NA18570,NA19904,HG00139,NA19901,NA19900,HG00131,NA19909,SJK,NA18502,NA18501,NA18507,NA18504,NA18505,NA20503,NA20505,NA20826,NA18987,NA18984,NA18985,NA20765,NA18980,NA18981,NA12827,NA18989,HG00626,NA12383,HG00149,HG00145,HG00142,HG00141,HG00140,NA20342,NA11931,NA11933,NA19171,NA19172,HG01140,NA19107,NA18870,NA18871,NA18874,NA18933,NA12763,NA18973,NA18972,NA18971,NA18977,NA18976,NA18975,NA18974,HG00595,NA19471,NA19470,NA19472,NA19474,NA19655,NA19712,HG00353,sample_essv9763173,HG00337,HG00566,NA19003,NA19379,NA19372,NA19373,HG00404,NA19371,NA19376,NA19377,NA19374,NA19005,NA18539,NA19007,NA19000,HG00704,NA18536,NA18534,NA19396,NA19390,NA19391,NA19393,BILGI_BIOE,NA11843,NA19398,NA19240,HG00327,HG00326,NA12003,HG00324,NA12005,HG00320,HG00328,HG01047,NA19098,HG01360,NA18626,NA19093,NA19092,HG01366,NA18620,NA12342,HG00106,HG00108,NA20795,NA20798,NA12892,HG00325,NA19056,NA20819,NA20818,NA20815,NA20813,NA19439,NA19438,HG00619,NA19435,NA19434,NA19431,NA19430,HG00611,HG00610,NA20808,NA19225,NA19189,NA20542,NA18924,NA12400,NA18923,HG01133,HG01134,HG01137,HG01136,HG00684,NA19131,HG00683,NA19138,HG00689,NA07347,NA19099,NA19985,NA11881,NA12046,HG00246,NA18610,HG00361,HG01365,NA19347,NA18621,HG00536,HG00534,HG00533,HG00656,NA18567,NA18560,NA18563,HG00654,NA11831,NA19916,HG01440,NA19914,NA19440,NA20516,NA20512,NA20513,NA20519,HG01250,HG01251,HG01253,HG01254,NA12830,NA20771,NA12273,NA20289,NA20281,HG00158,NA19137,HG00152,NA19144,NA19147,HG01174,HG01177,HG01171,HG01170,HG01173,NA19466,NA19467,NA19462,HG00559,NA18960,NA18961,NA18963,NA18964,NA18965,NA18967,NA19213,NA19318,NA19311,NA19312,NA11994,NA11995,NA19080,HG00578,HG00479,NA12775,HG00473,HG00475,NA18520,NA18522,NA18523,HG01489,HG01488,NA19819,NA19818,HG00335,HG01357,NA12154,HG01350,HG01353,HG00136,NA18549,HG01359,NA19088,HG00500,NA19084,NA19085,NA18636,NA19087,HG01052,NA19082,NA18633,HG00111,HG00117,HG00119,HG01551,HG01550,NA19920,NA20525,NA20521,NA20520,NA12489,NA20804,NA20805,NA20803,NA20509,NA19428,NA19429,NA18968,NA19190,NA19197,NA19210,NA19198,HG01124,HG01080,NA18858,NA18910,NA18912,NA12414,NA18916,NA18853,NA18856,NA19108,NA19457,HG00731,NA19455,NA19453,NA19452,NA19451,NA19102;num_samples_tested=1824;frequency=27.41%;num_unique_samples_tested=1824;nr_frequency=27.41%;PopulationSummary=European 128:Asian 140:Mexican 9:African 159:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 63:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	4155145	4155460	.	.	.	ID=gssv609;Name=gssv609;variant_type=CNV;variant_sub_type=Loss;outer_start=4155097;inner_start=4155145;inner_end=4155460;outer_end=4155500;inner_rank=8;num_variants=500;variants=essv9763173,nssv3005185,essv5400647,essv5404760,essv5409673,essv5412231,essv5416350,essv5416954,essv5417753,essv5420359,essv5423090,essv5423894,essv5425839,essv5425928,essv5429972,essv5432076,essv5434883,essv5436195,essv5436209,essv5436690,essv5439720,essv5440445,essv5440623,essv5444318,essv5444651,essv5445907,essv5447402,essv5454654,essv5455457,essv5460664,essv5460824,essv5461293,essv5462278,essv5462741,essv5463504,essv5467145,essv5468302,essv5472316,essv5473701,essv5474602,essv5480437,essv5481254,essv5487258,essv5488685,essv5488708,essv5490043,essv5491401,essv5492376,essv5493486,essv5493619,essv5495316,essv5502153,essv5507486,essv5507771,essv5510387,essv5513721,essv5514146,essv5514413,essv5515568,essv5525436,essv5525642,essv5527706,essv5530755,essv5537723,essv5539220,essv5539881,essv5544138,essv5544662,essv5545113,essv5546711,essv5551978,essv5552172,essv5552684,essv5553553,essv5554398,essv5554740,essv5555798,essv5557671,essv5561679,essv5563752,essv5564291,essv5568383,essv5570050,essv5570464,essv5574495,essv5576029,essv5580054,essv5580077,essv5581861,essv5584199,essv5584652,essv5586893,essv5591604,essv5591860,essv5592072,essv5593100,essv5593442,essv5595811,essv5596636,essv5596722,essv5601001,essv5610594,essv5613485,essv5613942,essv5618172,essv5619817,essv5619959,essv5624570,essv5625067,essv5625809,essv5626489,essv5632950,essv5633885,essv5638599,essv5642732,essv5645667,essv5645674,essv5645752,essv5649371,essv5649593,essv5655150,essv5656859,essv5657182,essv5657760,essv5659417,essv5662498,essv5662536,essv5667647,essv5669178,essv5671159,essv5674114,essv5675048,essv5676682,essv5679696,essv5683739,essv5689998,essv5690829,essv5690906,essv5692571,essv5693520,essv5695013,essv5697605,essv5700429,essv5709559,essv5710458,essv5711005,essv5716477,essv5718527,essv5718766,essv5721676,essv5722186,essv5731908,essv5733440,essv5735011,essv5735936,essv5738061,essv5738329,essv5738540,essv5742053,essv5742125,essv5743495,essv5744657,essv5745115,essv5745546,essv5754352,essv5759384,essv5763684,essv5764782,essv5764796,essv5765320,essv5766200,essv5769643,essv5769818,essv5778315,essv5779445,essv5779455,essv5782772,essv5787329,essv5790800,essv5792661,essv5794764,essv5795580,essv5795700,essv5796023,essv5797462,essv5797735,essv5799845,essv5810987,essv5811643,essv5814062,essv5814097,essv5814198,essv5815861,essv5822662,essv5824039,essv5825090,essv5828050,essv5828845,essv5829028,essv5835084,essv5835270,essv5836794,essv5838549,essv5840392,essv5849778,essv5849868,essv5849907,essv5850246,essv5851281,essv5851499,essv5851870,essv5854357,essv5857215,essv5859917,essv5860012,essv5860078,essv5862358,essv5864085,essv5864499,essv5864800,essv5869603,essv5871249,essv5872828,essv5874014,essv5878980,essv5881248,essv5883312,essv5888174,essv5891153,essv5891577,essv5906556,essv5906743,essv5907229,essv5907886,essv5908317,essv5914215,essv5915358,essv5918981,essv5922256,essv5924139,essv5927617,essv5928753,essv5929321,essv5931393,essv5931499,essv5933179,essv5934353,essv5934874,essv5935568,essv5936481,essv5937739,essv5942658,essv5948978,essv5949633,essv5949728,essv5950218,essv5953199,essv5956536,essv5958282,essv5958672,essv5960624,essv5964268,essv5966344,essv5969913,essv5971923,essv5975240,essv5982823,essv5984015,essv5986805,essv5987438,essv5988594,essv5989382,essv5995758,essv5996809,essv5999238,essv6000843,essv6001124,essv6001636,essv6003159,essv6003168,essv6003735,essv6004457,essv6009282,essv6009350,essv6009645,essv6010525,essv6010927,essv6011822,essv6011900,essv6025572,essv6026602,essv6026626,essv6028267,essv6028911,essv6034621,essv6036697,essv6038483,essv6040550,essv6040682,essv6042936,essv6045932,essv6048564,essv6050377,essv6051382,essv6054367,essv6060093,essv6062496,essv6069086,essv6069255,essv6069405,essv6079631,essv6082581,essv6086033,essv6086340,essv6087791,essv6088219,essv6088301,essv6089500,essv6092118,essv6099027,essv6100412,essv6101480,essv6108426,essv6109964,essv6112515,essv6116518,essv6118494,essv6120348,essv6121569,essv6123322,essv6123979,essv6132364,essv6134085,essv6143554,essv6145633,essv6148691,essv6149254,essv6155237,essv6159333,essv6159535,essv6161799,essv6162983,essv6168254,essv6172272,essv6174952,essv6176070,essv6178006,essv6181254,essv6190853,essv6194290,essv6195976,essv6196148,essv6198656,essv6199612,essv6199654,essv6203294,essv6207058,essv6209196,essv6211474,essv6211677,essv6213691,essv6213962,essv6219195,essv6222095,essv6225461,essv6227312,essv6228607,essv6228892,essv6231357,essv6233458,essv6236443,essv6237314,essv6239144,essv6241220,essv6242330,essv6243065,essv6248593,essv6249042,essv6253377,essv6254490,essv6255646,essv6256649,essv6257016,essv6260502,essv6260811,essv6260930,essv6263061,essv6265616,essv6267344,essv6268208,essv6271856,essv6272544,essv6274740,essv6281010,essv6281240,essv6282481,essv6284332,essv6285170,essv6297843,essv6299436,essv6301110,essv6301949,essv6305227,essv6313715,essv6315089,essv6315836,essv6316905,essv6317148,essv6327230,essv6328172,essv6329663,essv6329900,essv6335322,essv6337110,essv6337571,essv6339112,essv6343326,essv6343669,essv6344031,essv6355014,essv6358413,essv6358726,essv6361757,essv6364771,essv6365285,essv6370681,essv6371379,essv6376492,essv6385060,essv6389276,essv6390173,essv6395431,essv6397348,essv6409615,essv6414649,essv6414749,essv6420096,essv6421277,essv6421493,essv6426524,essv6431479,essv6433499,essv6438894,essv6440640,essv6442475,essv6443566,essv6445846,essv6448732,essv6449283,essv6451822,essv6454762,essv6455316,essv6455508,essv6455651,essv6457412,essv6466324,essv6470268,essv6472399,essv6472934,essv6477362,essv6482512,essv6484139,essv6485976,essv6489344,essv6489866,essv6490815,essv6494614,essv6494997,essv6496217,essv6499923,essv6503444,essv6510565,essv6512049,essv6518642,essv6521397,essv6524458,essv6533852,essv6534190,essv6534486,essv6535724,essv6539504,essv6541439,essv6541718,essv6543566,essv6553473,essv6563655,essv6567490,essv6568262,essv6568831,essv6571288,essv6579998,essv6582880,essv6584811,essv6587724,essv6589774,essv6593631,essv6593647,essv6593828,essv6595989,essv29787;num_studies=4;studies=1000GenomesPhase1,Ahn2009,Boomsma2014,Dogan2014;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq,Illumina_GA;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=500;samples=NA18986,NA19779,NA07357,NA19777,NA18982,NA12058,NA19469,HG00273,HG00275,HG00276,HG00278,NA19670,HG00377,NA19350,NA19355,HG00422,NA19066,HG00428,NA18553,NA18558,HG01073,HG01455,NA06986,NA18487,NA18486,NA18489,NA19074,NA19077,NA19076,NA19070,HG01061,NA19072,NA19079,NA19078,HG01069,HG00613,HG00640,HG00160,HG00280,HG00282,NA11919,HG00285,HG00513,NA18956,NA18951,NA18950,NA18953,NA18952,NA18959,NA12891,HG00237,HG00239,HG00589,NA12748,HG00584,HG00583,HG01112,HG00581,HG01098,NA19152,NA19153,NA19257,NA19256,NA19159,HG01497,HG01491,HG01498,NA19359,HG01342,HG00306,HG00309,NA18608,HG01183,NA18603,NA20581,NA20582,NA07037,NA20586,HG01441,HG00124,HG01461,HG01465,NA18517,HG01334,NA18511,NA18510,NA20536,NA20537,NA18519,NA20533,NA20754,NA20759,NA18990,HG00638,NA18873,HG00634,NA20332,NA11920,NA19160,NA18867,NA18861,NA18868,HG01095,HG00705,NA19130,NA18908,NA18909,NA18907,HG00708,NA19684,NA19685,NA19119,NA19448,NA19449,NA19444,NA19445,NA19446,NA19116,NA19114,NA19443,NA19664,NA19660,NA19703,NA07346,NA19700,NA19707,NA19704,HG00345,HG00344,HG01384,HG00346,HG00343,HG00342,HG00264,HG00265,HG00263,NA19207,NA19204,NA19200,NA19201,NA19360,HG00556,NA19209,NA10851,NA19012,NA18548,NA19010,NA18547,NA18544,NA18545,NA19385,NA19384,NA19382,NA19381,NA19380,NA18499,NA19062,NA19063,HG01378,HG01070,NA19067,HG01072,NA19065,NA19068,HG01377,HG01375,HG01374,HG01354,HG01060,NA12155,HG00177,HG01356,NA07000,HG01437,HG01204,NA20276,NA18942,NA18943,NA18940,NA18941,NA18947,NA18944,NA18945,NA18948,NA18949,NA19401,NA19403,NA18508,HG00188,NA12813,HG00182,HG00180,HG00421,NA19239,NA19238,NA19235,NA19625,NA18934,HG01108,NA19729,HG01107,HG00590,HG01102,NA19248,HG00693,HG00692,HG00690,NA19129,NA19083,NA19058,NA11894,NA19057,NA11892,NA19055,NA19054,NA18516,NA19835,NA19834,HG00257,NA18615,HG00253,NA18613,HG00251,HG00319,NA18595,NA18596,NA18619,NA19334,NA18577,NA18574,NA18572,NA18571,NA18570,NA19904,HG00139,NA19901,NA19900,HG00131,NA19909,SJK,NA18502,NA18501,NA18507,NA18504,NA18505,NA20503,NA20505,NA20826,NA18987,NA18984,NA18985,NA20765,NA18980,NA18981,NA12827,NA18989,HG00626,NA12383,HG00149,HG00145,HG00142,HG00141,HG00140,NA20342,NA11931,NA11933,NA19171,NA19172,HG01140,NA19107,NA18870,NA18871,NA18874,NA18933,NA12763,NA18973,NA18972,NA18971,NA18977,NA18976,NA18975,NA18974,HG00595,NA19471,NA19470,NA19472,NA19474,NA19655,NA19712,HG00353,sample_essv9763173,HG00337,HG00566,NA19003,NA19379,NA19372,NA19373,HG00404,NA19371,NA19376,NA19377,NA19374,NA19005,NA18539,NA19007,NA19000,HG00704,NA18536,NA18534,NA19396,NA19390,NA19391,NA19393,BILGI_BIOE,NA11843,NA19398,NA19240,HG00327,HG00326,NA12003,HG00324,NA12005,HG00320,HG00328,HG01047,NA19098,HG01360,NA18626,NA19093,NA19092,HG01366,NA18620,NA12342,HG00106,HG00108,NA20795,NA20798,NA12892,HG00325,NA19056,NA20819,NA20818,NA20815,NA20813,NA19439,NA19438,HG00619,NA19435,NA19434,NA19431,NA19430,HG00611,HG00610,NA20808,NA19225,NA19189,NA20542,NA18924,NA12400,NA18923,HG01133,HG01134,HG01137,HG01136,HG00684,NA19131,HG00683,NA19138,HG00689,NA07347,NA19099,NA19985,NA11881,NA12046,HG00246,NA18610,HG00361,HG01365,NA19347,NA18621,HG00536,HG00534,HG00533,HG00656,NA18567,NA18560,NA18563,HG00654,NA11831,NA19916,HG01440,NA19914,NA19440,NA20516,NA20512,NA20513,NA20519,HG01250,HG01251,HG01253,HG01254,NA12830,NA20771,NA12273,NA20289,NA20281,HG00158,NA19137,HG00152,NA19144,NA19147,HG01174,HG01177,HG01171,HG01170,HG01173,NA19466,NA19467,NA19462,HG00559,NA18960,NA18961,NA18963,NA18964,NA18965,NA18967,NA19213,NA19318,NA19311,NA19312,NA11994,NA11995,NA19080,HG00578,HG00479,NA12775,HG00473,HG00475,NA18520,NA18522,NA18523,HG01489,HG01488,NA19819,NA19818,HG00335,HG01357,NA12154,HG01350,HG01353,HG00136,NA18549,HG01359,NA19088,HG00500,NA19084,NA19085,NA18636,NA19087,HG01052,NA19082,NA18633,HG00111,HG00117,HG00119,HG01551,HG01550,NA19920,NA20525,NA20521,NA20520,NA12489,NA20804,NA20805,NA20803,NA20509,NA19428,NA19429,NA18968,NA19190,NA19197,NA19210,NA19198,HG01124,HG01080,NA18858,NA18910,NA18912,NA12414,NA18916,NA18853,NA18856,NA19108,NA19457,HG00731,NA19455,NA19453,NA19452,NA19451,NA19102;num_samples_tested=1824;frequency=27.41%;num_unique_samples_tested=1824;nr_frequency=27.41%;PopulationSummary=European 128:Asian 140:Mexican 9:African 159:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 63:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	4155500	4155500	.	.	.	ID=gssv609;Name=gssv609;variant_type=CNV;variant_sub_type=Loss;outer_start=4155097;inner_start=4155145;inner_end=4155460;outer_end=4155500;inner_rank=8;num_variants=500;variants=essv9763173,nssv3005185,essv5400647,essv5404760,essv5409673,essv5412231,essv5416350,essv5416954,essv5417753,essv5420359,essv5423090,essv5423894,essv5425839,essv5425928,essv5429972,essv5432076,essv5434883,essv5436195,essv5436209,essv5436690,essv5439720,essv5440445,essv5440623,essv5444318,essv5444651,essv5445907,essv5447402,essv5454654,essv5455457,essv5460664,essv5460824,essv5461293,essv5462278,essv5462741,essv5463504,essv5467145,essv5468302,essv5472316,essv5473701,essv5474602,essv5480437,essv5481254,essv5487258,essv5488685,essv5488708,essv5490043,essv5491401,essv5492376,essv5493486,essv5493619,essv5495316,essv5502153,essv5507486,essv5507771,essv5510387,essv5513721,essv5514146,essv5514413,essv5515568,essv5525436,essv5525642,essv5527706,essv5530755,essv5537723,essv5539220,essv5539881,essv5544138,essv5544662,essv5545113,essv5546711,essv5551978,essv5552172,essv5552684,essv5553553,essv5554398,essv5554740,essv5555798,essv5557671,essv5561679,essv5563752,essv5564291,essv5568383,essv5570050,essv5570464,essv5574495,essv5576029,essv5580054,essv5580077,essv5581861,essv5584199,essv5584652,essv5586893,essv5591604,essv5591860,essv5592072,essv5593100,essv5593442,essv5595811,essv5596636,essv5596722,essv5601001,essv5610594,essv5613485,essv5613942,essv5618172,essv5619817,essv5619959,essv5624570,essv5625067,essv5625809,essv5626489,essv5632950,essv5633885,essv5638599,essv5642732,essv5645667,essv5645674,essv5645752,essv5649371,essv5649593,essv5655150,essv5656859,essv5657182,essv5657760,essv5659417,essv5662498,essv5662536,essv5667647,essv5669178,essv5671159,essv5674114,essv5675048,essv5676682,essv5679696,essv5683739,essv5689998,essv5690829,essv5690906,essv5692571,essv5693520,essv5695013,essv5697605,essv5700429,essv5709559,essv5710458,essv5711005,essv5716477,essv5718527,essv5718766,essv5721676,essv5722186,essv5731908,essv5733440,essv5735011,essv5735936,essv5738061,essv5738329,essv5738540,essv5742053,essv5742125,essv5743495,essv5744657,essv5745115,essv5745546,essv5754352,essv5759384,essv5763684,essv5764782,essv5764796,essv5765320,essv5766200,essv5769643,essv5769818,essv5778315,essv5779445,essv5779455,essv5782772,essv5787329,essv5790800,essv5792661,essv5794764,essv5795580,essv5795700,essv5796023,essv5797462,essv5797735,essv5799845,essv5810987,essv5811643,essv5814062,essv5814097,essv5814198,essv5815861,essv5822662,essv5824039,essv5825090,essv5828050,essv5828845,essv5829028,essv5835084,essv5835270,essv5836794,essv5838549,essv5840392,essv5849778,essv5849868,essv5849907,essv5850246,essv5851281,essv5851499,essv5851870,essv5854357,essv5857215,essv5859917,essv5860012,essv5860078,essv5862358,essv5864085,essv5864499,essv5864800,essv5869603,essv5871249,essv5872828,essv5874014,essv5878980,essv5881248,essv5883312,essv5888174,essv5891153,essv5891577,essv5906556,essv5906743,essv5907229,essv5907886,essv5908317,essv5914215,essv5915358,essv5918981,essv5922256,essv5924139,essv5927617,essv5928753,essv5929321,essv5931393,essv5931499,essv5933179,essv5934353,essv5934874,essv5935568,essv5936481,essv5937739,essv5942658,essv5948978,essv5949633,essv5949728,essv5950218,essv5953199,essv5956536,essv5958282,essv5958672,essv5960624,essv5964268,essv5966344,essv5969913,essv5971923,essv5975240,essv5982823,essv5984015,essv5986805,essv5987438,essv5988594,essv5989382,essv5995758,essv5996809,essv5999238,essv6000843,essv6001124,essv6001636,essv6003159,essv6003168,essv6003735,essv6004457,essv6009282,essv6009350,essv6009645,essv6010525,essv6010927,essv6011822,essv6011900,essv6025572,essv6026602,essv6026626,essv6028267,essv6028911,essv6034621,essv6036697,essv6038483,essv6040550,essv6040682,essv6042936,essv6045932,essv6048564,essv6050377,essv6051382,essv6054367,essv6060093,essv6062496,essv6069086,essv6069255,essv6069405,essv6079631,essv6082581,essv6086033,essv6086340,essv6087791,essv6088219,essv6088301,essv6089500,essv6092118,essv6099027,essv6100412,essv6101480,essv6108426,essv6109964,essv6112515,essv6116518,essv6118494,essv6120348,essv6121569,essv6123322,essv6123979,essv6132364,essv6134085,essv6143554,essv6145633,essv6148691,essv6149254,essv6155237,essv6159333,essv6159535,essv6161799,essv6162983,essv6168254,essv6172272,essv6174952,essv6176070,essv6178006,essv6181254,essv6190853,essv6194290,essv6195976,essv6196148,essv6198656,essv6199612,essv6199654,essv6203294,essv6207058,essv6209196,essv6211474,essv6211677,essv6213691,essv6213962,essv6219195,essv6222095,essv6225461,essv6227312,essv6228607,essv6228892,essv6231357,essv6233458,essv6236443,essv6237314,essv6239144,essv6241220,essv6242330,essv6243065,essv6248593,essv6249042,essv6253377,essv6254490,essv6255646,essv6256649,essv6257016,essv6260502,essv6260811,essv6260930,essv6263061,essv6265616,essv6267344,essv6268208,essv6271856,essv6272544,essv6274740,essv6281010,essv6281240,essv6282481,essv6284332,essv6285170,essv6297843,essv6299436,essv6301110,essv6301949,essv6305227,essv6313715,essv6315089,essv6315836,essv6316905,essv6317148,essv6327230,essv6328172,essv6329663,essv6329900,essv6335322,essv6337110,essv6337571,essv6339112,essv6343326,essv6343669,essv6344031,essv6355014,essv6358413,essv6358726,essv6361757,essv6364771,essv6365285,essv6370681,essv6371379,essv6376492,essv6385060,essv6389276,essv6390173,essv6395431,essv6397348,essv6409615,essv6414649,essv6414749,essv6420096,essv6421277,essv6421493,essv6426524,essv6431479,essv6433499,essv6438894,essv6440640,essv6442475,essv6443566,essv6445846,essv6448732,essv6449283,essv6451822,essv6454762,essv6455316,essv6455508,essv6455651,essv6457412,essv6466324,essv6470268,essv6472399,essv6472934,essv6477362,essv6482512,essv6484139,essv6485976,essv6489344,essv6489866,essv6490815,essv6494614,essv6494997,essv6496217,essv6499923,essv6503444,essv6510565,essv6512049,essv6518642,essv6521397,essv6524458,essv6533852,essv6534190,essv6534486,essv6535724,essv6539504,essv6541439,essv6541718,essv6543566,essv6553473,essv6563655,essv6567490,essv6568262,essv6568831,essv6571288,essv6579998,essv6582880,essv6584811,essv6587724,essv6589774,essv6593631,essv6593647,essv6593828,essv6595989,essv29787;num_studies=4;studies=1000GenomesPhase1,Ahn2009,Boomsma2014,Dogan2014;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq,Illumina_GA;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=500;samples=NA18986,NA19779,NA07357,NA19777,NA18982,NA12058,NA19469,HG00273,HG00275,HG00276,HG00278,NA19670,HG00377,NA19350,NA19355,HG00422,NA19066,HG00428,NA18553,NA18558,HG01073,HG01455,NA06986,NA18487,NA18486,NA18489,NA19074,NA19077,NA19076,NA19070,HG01061,NA19072,NA19079,NA19078,HG01069,HG00613,HG00640,HG00160,HG00280,HG00282,NA11919,HG00285,HG00513,NA18956,NA18951,NA18950,NA18953,NA18952,NA18959,NA12891,HG00237,HG00239,HG00589,NA12748,HG00584,HG00583,HG01112,HG00581,HG01098,NA19152,NA19153,NA19257,NA19256,NA19159,HG01497,HG01491,HG01498,NA19359,HG01342,HG00306,HG00309,NA18608,HG01183,NA18603,NA20581,NA20582,NA07037,NA20586,HG01441,HG00124,HG01461,HG01465,NA18517,HG01334,NA18511,NA18510,NA20536,NA20537,NA18519,NA20533,NA20754,NA20759,NA18990,HG00638,NA18873,HG00634,NA20332,NA11920,NA19160,NA18867,NA18861,NA18868,HG01095,HG00705,NA19130,NA18908,NA18909,NA18907,HG00708,NA19684,NA19685,NA19119,NA19448,NA19449,NA19444,NA19445,NA19446,NA19116,NA19114,NA19443,NA19664,NA19660,NA19703,NA07346,NA19700,NA19707,NA19704,HG00345,HG00344,HG01384,HG00346,HG00343,HG00342,HG00264,HG00265,HG00263,NA19207,NA19204,NA19200,NA19201,NA19360,HG00556,NA19209,NA10851,NA19012,NA18548,NA19010,NA18547,NA18544,NA18545,NA19385,NA19384,NA19382,NA19381,NA19380,NA18499,NA19062,NA19063,HG01378,HG01070,NA19067,HG01072,NA19065,NA19068,HG01377,HG01375,HG01374,HG01354,HG01060,NA12155,HG00177,HG01356,NA07000,HG01437,HG01204,NA20276,NA18942,NA18943,NA18940,NA18941,NA18947,NA18944,NA18945,NA18948,NA18949,NA19401,NA19403,NA18508,HG00188,NA12813,HG00182,HG00180,HG00421,NA19239,NA19238,NA19235,NA19625,NA18934,HG01108,NA19729,HG01107,HG00590,HG01102,NA19248,HG00693,HG00692,HG00690,NA19129,NA19083,NA19058,NA11894,NA19057,NA11892,NA19055,NA19054,NA18516,NA19835,NA19834,HG00257,NA18615,HG00253,NA18613,HG00251,HG00319,NA18595,NA18596,NA18619,NA19334,NA18577,NA18574,NA18572,NA18571,NA18570,NA19904,HG00139,NA19901,NA19900,HG00131,NA19909,SJK,NA18502,NA18501,NA18507,NA18504,NA18505,NA20503,NA20505,NA20826,NA18987,NA18984,NA18985,NA20765,NA18980,NA18981,NA12827,NA18989,HG00626,NA12383,HG00149,HG00145,HG00142,HG00141,HG00140,NA20342,NA11931,NA11933,NA19171,NA19172,HG01140,NA19107,NA18870,NA18871,NA18874,NA18933,NA12763,NA18973,NA18972,NA18971,NA18977,NA18976,NA18975,NA18974,HG00595,NA19471,NA19470,NA19472,NA19474,NA19655,NA19712,HG00353,sample_essv9763173,HG00337,HG00566,NA19003,NA19379,NA19372,NA19373,HG00404,NA19371,NA19376,NA19377,NA19374,NA19005,NA18539,NA19007,NA19000,HG00704,NA18536,NA18534,NA19396,NA19390,NA19391,NA19393,BILGI_BIOE,NA11843,NA19398,NA19240,HG00327,HG00326,NA12003,HG00324,NA12005,HG00320,HG00328,HG01047,NA19098,HG01360,NA18626,NA19093,NA19092,HG01366,NA18620,NA12342,HG00106,HG00108,NA20795,NA20798,NA12892,HG00325,NA19056,NA20819,NA20818,NA20815,NA20813,NA19439,NA19438,HG00619,NA19435,NA19434,NA19431,NA19430,HG00611,HG00610,NA20808,NA19225,NA19189,NA20542,NA18924,NA12400,NA18923,HG01133,HG01134,HG01137,HG01136,HG00684,NA19131,HG00683,NA19138,HG00689,NA07347,NA19099,NA19985,NA11881,NA12046,HG00246,NA18610,HG00361,HG01365,NA19347,NA18621,HG00536,HG00534,HG00533,HG00656,NA18567,NA18560,NA18563,HG00654,NA11831,NA19916,HG01440,NA19914,NA19440,NA20516,NA20512,NA20513,NA20519,HG01250,HG01251,HG01253,HG01254,NA12830,NA20771,NA12273,NA20289,NA20281,HG00158,NA19137,HG00152,NA19144,NA19147,HG01174,HG01177,HG01171,HG01170,HG01173,NA19466,NA19467,NA19462,HG00559,NA18960,NA18961,NA18963,NA18964,NA18965,NA18967,NA19213,NA19318,NA19311,NA19312,NA11994,NA11995,NA19080,HG00578,HG00479,NA12775,HG00473,HG00475,NA18520,NA18522,NA18523,HG01489,HG01488,NA19819,NA19818,HG00335,HG01357,NA12154,HG01350,HG01353,HG00136,NA18549,HG01359,NA19088,HG00500,NA19084,NA19085,NA18636,NA19087,HG01052,NA19082,NA18633,HG00111,HG00117,HG00119,HG01551,HG01550,NA19920,NA20525,NA20521,NA20520,NA12489,NA20804,NA20805,NA20803,NA20509,NA19428,NA19429,NA18968,NA19190,NA19197,NA19210,NA19198,HG01124,HG01080,NA18858,NA18910,NA18912,NA12414,NA18916,NA18853,NA18856,NA19108,NA19457,HG00731,NA19455,NA19453,NA19452,NA19451,NA19102;num_samples_tested=1824;frequency=27.41%;num_unique_samples_tested=1824;nr_frequency=27.41%;PopulationSummary=European 128:Asian 140:Mexican 9:African 159:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 63:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	2919031	2919031	.	.	.	ID=gssv612;Name=gssv612;variant_type=CNV;variant_sub_type=Loss;outer_start=2919031;inner_start=2919031;inner_end=2919366;outer_end=2919380;inner_rank=8;num_variants=160;variants=essv9760728,essv5396024,essv5397498,essv5402798,essv5404440,essv5411894,essv5422458,essv5430982,essv5431264,essv5436797,essv5438938,essv5451855,essv5455553,essv5466216,essv5475936,essv5485071,essv5489446,essv5500108,essv5502367,essv5504364,essv5513115,essv5516011,essv5543768,essv5552976,essv5573415,essv5588588,essv5593902,essv5602371,essv5605448,essv5608294,essv5609848,essv5625343,essv5626515,essv5645942,essv5656248,essv5658732,essv5670266,essv5676123,essv5676796,essv5683127,essv5688894,essv5695235,essv5695368,essv5699689,essv5707531,essv5707701,essv5718031,essv5725435,essv5729104,essv5743002,essv5749032,essv5749338,essv5753674,essv5756825,essv5757246,essv5767237,essv5768297,essv5776747,essv5802399,essv5805781,essv5813093,essv5815156,essv5832535,essv5838156,essv5843000,essv5845033,essv5865350,essv5880202,essv5882249,essv5884558,essv5888783,essv5910984,essv5919493,essv5938283,essv5941668,essv5946869,essv5948208,essv5950451,essv5968624,essv5980229,essv5984772,essv5994927,essv6006306,essv6010515,essv6013512,essv6022989,essv6046184,essv6057669,essv6071774,essv6072478,essv6077957,essv6090818,essv6092954,essv6097296,essv6097660,essv6098192,essv6108901,essv6125588,essv6149007,essv6175610,essv6183062,essv6191912,essv6192468,essv6197085,essv6200508,essv6213795,essv6216524,essv6221677,essv6229658,essv6231333,essv6246125,essv6248609,essv6251529,essv6252438,essv6255770,essv6272950,essv6286225,essv6287272,essv6287300,essv6290344,essv6293425,essv6298250,essv6300416,essv6311507,essv6319932,essv6320765,essv6333025,essv6356611,essv6378956,essv6383875,essv6391995,essv6392009,essv6395209,essv6406995,essv6408277,essv6429478,essv6441578,essv6446882,essv6461755,essv6463619,essv6465566,essv6467509,essv6473198,essv6473788,essv6478079,essv6488384,essv6496957,essv6502250,essv6504886,essv6509575,essv6522160,essv6525071,essv6527558,essv6530854,essv6544689,essv6545117,essv6567166,essv6578743,essv6582473,essv6588504;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=160;samples=NA18986,NA18564,NA18984,NA11920,NA18560,NA18983,NA18563,NA12827,NA19771,NA19914,NA20765,NA12383,HG00707,HG00148,NA19779,HG00708,HG00140,NA19776,HG00421,HG00542,NA19664,NA18552,NA18555,NA18557,NA19663,NA20772,NA20771,HG00345,NA20529,NA06986,NA20537,HG00159,HG01488,NA18973,NA18940,NA19075,HG00154,NA19072,HG00557,NA19654,NA18548,NA18549,NA18546,NA18547,NA18544,NA18545,NA18543,NA18541,HG00592,NA19783,NA19782,HG00560,NA19788,NA18964,NA19063,HG01378,NA19066,NA19065,NA12282,HG01079,NA11918,HG00285,HG00335,NA18532,NA18537,NA19009,NA18534,NA18951,NA18953,HG00671,NA12891,HG00476,NA12750,NA18605,HG01204,NA18628,NA18627,NA18624,NA18623,NA18622,HG01366,HG00098,HG00373,NA18943,HG00237,NA18947,NA18945,HG00662,NA12348,HG01354,NA12155,HG01351,NA20796,NA18959,HG01112,NA19726,NA19720,HG00672,HG00187,NA18632,HG01497,NA19080,NA20786,HG00478,NA18630,HG01101,HG00611,NA19732,NA18608,NA19731,HG00692,HG00512,sample_essv9760728,NA20525,HG01188,NA18606,NA20585,NA19746,NA11894,NA19057,NA19759,NA11933,NA12489,HG00122,HG00442,NA18617,HG00254,NA18612,HG00252,NA12249,NA18611,NA18597,HG00313,NA18619,HG00684,HG01334,HG00525,HG00524,HG00683,NA12878,HG01357,HG00689,NA20756,NA18573,NA18572,NA18579,NA12046,NA12043,HG00608,HG00137,HG01083,HG00361,HG00249,HG01365,NA18609,NA18621,NA12716,HG00533,NA20507,HG00531;num_samples_tested=1822;frequency=8.78%;num_unique_samples_tested=1822;nr_frequency=8.78%;PopulationSummary=European 49:Asian 81:Mexican 15:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 14:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2919031	2919366	.	.	.	ID=gssv612;Name=gssv612;variant_type=CNV;variant_sub_type=Loss;outer_start=2919031;inner_start=2919031;inner_end=2919366;outer_end=2919380;inner_rank=8;num_variants=160;variants=essv9760728,essv5396024,essv5397498,essv5402798,essv5404440,essv5411894,essv5422458,essv5430982,essv5431264,essv5436797,essv5438938,essv5451855,essv5455553,essv5466216,essv5475936,essv5485071,essv5489446,essv5500108,essv5502367,essv5504364,essv5513115,essv5516011,essv5543768,essv5552976,essv5573415,essv5588588,essv5593902,essv5602371,essv5605448,essv5608294,essv5609848,essv5625343,essv5626515,essv5645942,essv5656248,essv5658732,essv5670266,essv5676123,essv5676796,essv5683127,essv5688894,essv5695235,essv5695368,essv5699689,essv5707531,essv5707701,essv5718031,essv5725435,essv5729104,essv5743002,essv5749032,essv5749338,essv5753674,essv5756825,essv5757246,essv5767237,essv5768297,essv5776747,essv5802399,essv5805781,essv5813093,essv5815156,essv5832535,essv5838156,essv5843000,essv5845033,essv5865350,essv5880202,essv5882249,essv5884558,essv5888783,essv5910984,essv5919493,essv5938283,essv5941668,essv5946869,essv5948208,essv5950451,essv5968624,essv5980229,essv5984772,essv5994927,essv6006306,essv6010515,essv6013512,essv6022989,essv6046184,essv6057669,essv6071774,essv6072478,essv6077957,essv6090818,essv6092954,essv6097296,essv6097660,essv6098192,essv6108901,essv6125588,essv6149007,essv6175610,essv6183062,essv6191912,essv6192468,essv6197085,essv6200508,essv6213795,essv6216524,essv6221677,essv6229658,essv6231333,essv6246125,essv6248609,essv6251529,essv6252438,essv6255770,essv6272950,essv6286225,essv6287272,essv6287300,essv6290344,essv6293425,essv6298250,essv6300416,essv6311507,essv6319932,essv6320765,essv6333025,essv6356611,essv6378956,essv6383875,essv6391995,essv6392009,essv6395209,essv6406995,essv6408277,essv6429478,essv6441578,essv6446882,essv6461755,essv6463619,essv6465566,essv6467509,essv6473198,essv6473788,essv6478079,essv6488384,essv6496957,essv6502250,essv6504886,essv6509575,essv6522160,essv6525071,essv6527558,essv6530854,essv6544689,essv6545117,essv6567166,essv6578743,essv6582473,essv6588504;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=160;samples=NA18986,NA18564,NA18984,NA11920,NA18560,NA18983,NA18563,NA12827,NA19771,NA19914,NA20765,NA12383,HG00707,HG00148,NA19779,HG00708,HG00140,NA19776,HG00421,HG00542,NA19664,NA18552,NA18555,NA18557,NA19663,NA20772,NA20771,HG00345,NA20529,NA06986,NA20537,HG00159,HG01488,NA18973,NA18940,NA19075,HG00154,NA19072,HG00557,NA19654,NA18548,NA18549,NA18546,NA18547,NA18544,NA18545,NA18543,NA18541,HG00592,NA19783,NA19782,HG00560,NA19788,NA18964,NA19063,HG01378,NA19066,NA19065,NA12282,HG01079,NA11918,HG00285,HG00335,NA18532,NA18537,NA19009,NA18534,NA18951,NA18953,HG00671,NA12891,HG00476,NA12750,NA18605,HG01204,NA18628,NA18627,NA18624,NA18623,NA18622,HG01366,HG00098,HG00373,NA18943,HG00237,NA18947,NA18945,HG00662,NA12348,HG01354,NA12155,HG01351,NA20796,NA18959,HG01112,NA19726,NA19720,HG00672,HG00187,NA18632,HG01497,NA19080,NA20786,HG00478,NA18630,HG01101,HG00611,NA19732,NA18608,NA19731,HG00692,HG00512,sample_essv9760728,NA20525,HG01188,NA18606,NA20585,NA19746,NA11894,NA19057,NA19759,NA11933,NA12489,HG00122,HG00442,NA18617,HG00254,NA18612,HG00252,NA12249,NA18611,NA18597,HG00313,NA18619,HG00684,HG01334,HG00525,HG00524,HG00683,NA12878,HG01357,HG00689,NA20756,NA18573,NA18572,NA18579,NA12046,NA12043,HG00608,HG00137,HG01083,HG00361,HG00249,HG01365,NA18609,NA18621,NA12716,HG00533,NA20507,HG00531;num_samples_tested=1822;frequency=8.78%;num_unique_samples_tested=1822;nr_frequency=8.78%;PopulationSummary=European 49:Asian 81:Mexican 15:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 14:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2919380	2919380	.	.	.	ID=gssv612;Name=gssv612;variant_type=CNV;variant_sub_type=Loss;outer_start=2919031;inner_start=2919031;inner_end=2919366;outer_end=2919380;inner_rank=8;num_variants=160;variants=essv9760728,essv5396024,essv5397498,essv5402798,essv5404440,essv5411894,essv5422458,essv5430982,essv5431264,essv5436797,essv5438938,essv5451855,essv5455553,essv5466216,essv5475936,essv5485071,essv5489446,essv5500108,essv5502367,essv5504364,essv5513115,essv5516011,essv5543768,essv5552976,essv5573415,essv5588588,essv5593902,essv5602371,essv5605448,essv5608294,essv5609848,essv5625343,essv5626515,essv5645942,essv5656248,essv5658732,essv5670266,essv5676123,essv5676796,essv5683127,essv5688894,essv5695235,essv5695368,essv5699689,essv5707531,essv5707701,essv5718031,essv5725435,essv5729104,essv5743002,essv5749032,essv5749338,essv5753674,essv5756825,essv5757246,essv5767237,essv5768297,essv5776747,essv5802399,essv5805781,essv5813093,essv5815156,essv5832535,essv5838156,essv5843000,essv5845033,essv5865350,essv5880202,essv5882249,essv5884558,essv5888783,essv5910984,essv5919493,essv5938283,essv5941668,essv5946869,essv5948208,essv5950451,essv5968624,essv5980229,essv5984772,essv5994927,essv6006306,essv6010515,essv6013512,essv6022989,essv6046184,essv6057669,essv6071774,essv6072478,essv6077957,essv6090818,essv6092954,essv6097296,essv6097660,essv6098192,essv6108901,essv6125588,essv6149007,essv6175610,essv6183062,essv6191912,essv6192468,essv6197085,essv6200508,essv6213795,essv6216524,essv6221677,essv6229658,essv6231333,essv6246125,essv6248609,essv6251529,essv6252438,essv6255770,essv6272950,essv6286225,essv6287272,essv6287300,essv6290344,essv6293425,essv6298250,essv6300416,essv6311507,essv6319932,essv6320765,essv6333025,essv6356611,essv6378956,essv6383875,essv6391995,essv6392009,essv6395209,essv6406995,essv6408277,essv6429478,essv6441578,essv6446882,essv6461755,essv6463619,essv6465566,essv6467509,essv6473198,essv6473788,essv6478079,essv6488384,essv6496957,essv6502250,essv6504886,essv6509575,essv6522160,essv6525071,essv6527558,essv6530854,essv6544689,essv6545117,essv6567166,essv6578743,essv6582473,essv6588504;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=160;samples=NA18986,NA18564,NA18984,NA11920,NA18560,NA18983,NA18563,NA12827,NA19771,NA19914,NA20765,NA12383,HG00707,HG00148,NA19779,HG00708,HG00140,NA19776,HG00421,HG00542,NA19664,NA18552,NA18555,NA18557,NA19663,NA20772,NA20771,HG00345,NA20529,NA06986,NA20537,HG00159,HG01488,NA18973,NA18940,NA19075,HG00154,NA19072,HG00557,NA19654,NA18548,NA18549,NA18546,NA18547,NA18544,NA18545,NA18543,NA18541,HG00592,NA19783,NA19782,HG00560,NA19788,NA18964,NA19063,HG01378,NA19066,NA19065,NA12282,HG01079,NA11918,HG00285,HG00335,NA18532,NA18537,NA19009,NA18534,NA18951,NA18953,HG00671,NA12891,HG00476,NA12750,NA18605,HG01204,NA18628,NA18627,NA18624,NA18623,NA18622,HG01366,HG00098,HG00373,NA18943,HG00237,NA18947,NA18945,HG00662,NA12348,HG01354,NA12155,HG01351,NA20796,NA18959,HG01112,NA19726,NA19720,HG00672,HG00187,NA18632,HG01497,NA19080,NA20786,HG00478,NA18630,HG01101,HG00611,NA19732,NA18608,NA19731,HG00692,HG00512,sample_essv9760728,NA20525,HG01188,NA18606,NA20585,NA19746,NA11894,NA19057,NA19759,NA11933,NA12489,HG00122,HG00442,NA18617,HG00254,NA18612,HG00252,NA12249,NA18611,NA18597,HG00313,NA18619,HG00684,HG01334,HG00525,HG00524,HG00683,NA12878,HG01357,HG00689,NA20756,NA18573,NA18572,NA18579,NA12046,NA12043,HG00608,HG00137,HG01083,HG00361,HG00249,HG01365,NA18609,NA18621,NA12716,HG00533,NA20507,HG00531;num_samples_tested=1822;frequency=8.78%;num_unique_samples_tested=1822;nr_frequency=8.78%;PopulationSummary=European 49:Asian 81:Mexican 15:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 14:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3082015	3082015	.	.	.	ID=gssv613;Name=gssv613;variant_type=CNV;variant_sub_type=Loss;outer_start=3082015;inner_start=3082050;inner_end=3082398;outer_end=3082399;inner_rank=8;num_variants=128;variants=essv5397932,essv5398800,essv5406361,essv5424731,essv5431659,essv5443857,essv5462076,essv5464148,essv5478028,essv5494452,essv5501467,essv5512908,essv5526373,essv5529709,essv5541246,essv5542135,essv5543393,essv5545290,essv5555654,essv5559838,essv5642389,essv5647864,essv5649876,essv5651766,essv5659194,essv5665082,essv5665526,essv5675554,essv5675793,essv5678624,essv5693036,essv5703019,essv5710521,essv5730609,essv5731192,essv5744813,essv5752439,essv5755154,essv5771735,essv5774820,essv5779366,essv5781509,essv5783985,essv5806442,essv5812292,essv5828794,essv5840446,essv5841234,essv5848025,essv5848289,essv5850489,essv5861509,essv5874746,essv5875036,essv5896676,essv5899828,essv5904917,essv5926559,essv5926716,essv5930357,essv5943685,essv5977786,essv5983683,essv5987147,essv5990786,essv6000764,essv6015486,essv6020196,essv6025286,essv6027703,essv6032443,essv6049657,essv6068129,essv6082472,essv6089295,essv6091377,essv6091505,essv6100803,essv6112108,essv6116683,essv6117538,essv6125869,essv6129654,essv6153613,essv6157596,essv6163803,essv6172207,essv6181202,essv6189458,essv6191098,essv6193640,essv6201697,essv6224723,essv6225449,essv6230481,essv6244611,essv6245572,essv6249623,essv6251044,essv6252831,essv6274084,essv6286208,essv6292284,essv6298081,essv6306676,essv6322722,essv6337398,essv6337981,essv6356412,essv6373808,essv6387702,essv6391630,essv6395125,essv6422607,essv6429513,essv6448046,essv6461104,essv6504564,essv6506679,essv6508168,essv6521146,essv6526641,essv6538462,essv6542459,essv6568601,essv6584466,essv6588994,essv9761284;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=128;samples=NA18596,sample_essv9761284,NA07056,NA07051,HG00620,NA12058,NA18612,HG00705,HG00707,HG00701,HG00277,HG00702,HG00708,HG00427,HG00421,HG00422,HG00543,HG00428,NA18559,NA18558,HG00653,HG00344,HG00651,HG00650,HG00656,HG00342,HG01389,HG00159,HG00672,HG00154,HG00150,HG00151,HG01067,HG01060,HG01069,HG00557,NA19436,NA18548,NA18549,NA18546,NA18544,NA18542,NA18543,HG01170,NA19463,HG01072,HG01073,HG01079,HG01375,HG01374,NA18530,HG00513,NA18536,NA19312,NA18534,HG00330,HG00331,HG00324,NA20510,HG00321,HG00276,HG01204,HG01365,NA18621,NA18620,HG01350,HG00607,HG00334,HG00337,HG01351,NA19657,HG00584,HG00338,HG00581,HG00580,NA19720,HG00500,NA18635,HG00463,HG00464,HG01498,HG00111,NA18637,NA18619,HG00619,HG00309,HG01107,HG00590,HG01101,HG01183,HG00690,HG00699,NA18606,HG00125,HG00124,NA19834,HG00123,HG00442,HG00443,NA18599,HG00251,HG00250,NA18595,HG01462,NA18597,HG00315,HG00310,HG01136,HG01334,HG00478,NA18519,NA18574,HG00256,HG01124,HG01125,NA12043,NA18990,HG01080,NA18910,HG00369,HG00318,HG00249,HG00437,HG00436,HG00346,HG00534,HG00734,HG00533;num_samples_tested=1822;frequency=7.03%;num_unique_samples_tested=1822;nr_frequency=7.02%;PopulationSummary=European 36:Asian 60:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 24:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3082050	3082398	.	.	.	ID=gssv613;Name=gssv613;variant_type=CNV;variant_sub_type=Loss;outer_start=3082015;inner_start=3082050;inner_end=3082398;outer_end=3082399;inner_rank=8;num_variants=128;variants=essv5397932,essv5398800,essv5406361,essv5424731,essv5431659,essv5443857,essv5462076,essv5464148,essv5478028,essv5494452,essv5501467,essv5512908,essv5526373,essv5529709,essv5541246,essv5542135,essv5543393,essv5545290,essv5555654,essv5559838,essv5642389,essv5647864,essv5649876,essv5651766,essv5659194,essv5665082,essv5665526,essv5675554,essv5675793,essv5678624,essv5693036,essv5703019,essv5710521,essv5730609,essv5731192,essv5744813,essv5752439,essv5755154,essv5771735,essv5774820,essv5779366,essv5781509,essv5783985,essv5806442,essv5812292,essv5828794,essv5840446,essv5841234,essv5848025,essv5848289,essv5850489,essv5861509,essv5874746,essv5875036,essv5896676,essv5899828,essv5904917,essv5926559,essv5926716,essv5930357,essv5943685,essv5977786,essv5983683,essv5987147,essv5990786,essv6000764,essv6015486,essv6020196,essv6025286,essv6027703,essv6032443,essv6049657,essv6068129,essv6082472,essv6089295,essv6091377,essv6091505,essv6100803,essv6112108,essv6116683,essv6117538,essv6125869,essv6129654,essv6153613,essv6157596,essv6163803,essv6172207,essv6181202,essv6189458,essv6191098,essv6193640,essv6201697,essv6224723,essv6225449,essv6230481,essv6244611,essv6245572,essv6249623,essv6251044,essv6252831,essv6274084,essv6286208,essv6292284,essv6298081,essv6306676,essv6322722,essv6337398,essv6337981,essv6356412,essv6373808,essv6387702,essv6391630,essv6395125,essv6422607,essv6429513,essv6448046,essv6461104,essv6504564,essv6506679,essv6508168,essv6521146,essv6526641,essv6538462,essv6542459,essv6568601,essv6584466,essv6588994,essv9761284;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=128;samples=NA18596,sample_essv9761284,NA07056,NA07051,HG00620,NA12058,NA18612,HG00705,HG00707,HG00701,HG00277,HG00702,HG00708,HG00427,HG00421,HG00422,HG00543,HG00428,NA18559,NA18558,HG00653,HG00344,HG00651,HG00650,HG00656,HG00342,HG01389,HG00159,HG00672,HG00154,HG00150,HG00151,HG01067,HG01060,HG01069,HG00557,NA19436,NA18548,NA18549,NA18546,NA18544,NA18542,NA18543,HG01170,NA19463,HG01072,HG01073,HG01079,HG01375,HG01374,NA18530,HG00513,NA18536,NA19312,NA18534,HG00330,HG00331,HG00324,NA20510,HG00321,HG00276,HG01204,HG01365,NA18621,NA18620,HG01350,HG00607,HG00334,HG00337,HG01351,NA19657,HG00584,HG00338,HG00581,HG00580,NA19720,HG00500,NA18635,HG00463,HG00464,HG01498,HG00111,NA18637,NA18619,HG00619,HG00309,HG01107,HG00590,HG01101,HG01183,HG00690,HG00699,NA18606,HG00125,HG00124,NA19834,HG00123,HG00442,HG00443,NA18599,HG00251,HG00250,NA18595,HG01462,NA18597,HG00315,HG00310,HG01136,HG01334,HG00478,NA18519,NA18574,HG00256,HG01124,HG01125,NA12043,NA18990,HG01080,NA18910,HG00369,HG00318,HG00249,HG00437,HG00436,HG00346,HG00534,HG00734,HG00533;num_samples_tested=1822;frequency=7.03%;num_unique_samples_tested=1822;nr_frequency=7.02%;PopulationSummary=European 36:Asian 60:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 24:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	3082399	3082399	.	.	.	ID=gssv613;Name=gssv613;variant_type=CNV;variant_sub_type=Loss;outer_start=3082015;inner_start=3082050;inner_end=3082398;outer_end=3082399;inner_rank=8;num_variants=128;variants=essv5397932,essv5398800,essv5406361,essv5424731,essv5431659,essv5443857,essv5462076,essv5464148,essv5478028,essv5494452,essv5501467,essv5512908,essv5526373,essv5529709,essv5541246,essv5542135,essv5543393,essv5545290,essv5555654,essv5559838,essv5642389,essv5647864,essv5649876,essv5651766,essv5659194,essv5665082,essv5665526,essv5675554,essv5675793,essv5678624,essv5693036,essv5703019,essv5710521,essv5730609,essv5731192,essv5744813,essv5752439,essv5755154,essv5771735,essv5774820,essv5779366,essv5781509,essv5783985,essv5806442,essv5812292,essv5828794,essv5840446,essv5841234,essv5848025,essv5848289,essv5850489,essv5861509,essv5874746,essv5875036,essv5896676,essv5899828,essv5904917,essv5926559,essv5926716,essv5930357,essv5943685,essv5977786,essv5983683,essv5987147,essv5990786,essv6000764,essv6015486,essv6020196,essv6025286,essv6027703,essv6032443,essv6049657,essv6068129,essv6082472,essv6089295,essv6091377,essv6091505,essv6100803,essv6112108,essv6116683,essv6117538,essv6125869,essv6129654,essv6153613,essv6157596,essv6163803,essv6172207,essv6181202,essv6189458,essv6191098,essv6193640,essv6201697,essv6224723,essv6225449,essv6230481,essv6244611,essv6245572,essv6249623,essv6251044,essv6252831,essv6274084,essv6286208,essv6292284,essv6298081,essv6306676,essv6322722,essv6337398,essv6337981,essv6356412,essv6373808,essv6387702,essv6391630,essv6395125,essv6422607,essv6429513,essv6448046,essv6461104,essv6504564,essv6506679,essv6508168,essv6521146,essv6526641,essv6538462,essv6542459,essv6568601,essv6584466,essv6588994,essv9761284;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=128;samples=NA18596,sample_essv9761284,NA07056,NA07051,HG00620,NA12058,NA18612,HG00705,HG00707,HG00701,HG00277,HG00702,HG00708,HG00427,HG00421,HG00422,HG00543,HG00428,NA18559,NA18558,HG00653,HG00344,HG00651,HG00650,HG00656,HG00342,HG01389,HG00159,HG00672,HG00154,HG00150,HG00151,HG01067,HG01060,HG01069,HG00557,NA19436,NA18548,NA18549,NA18546,NA18544,NA18542,NA18543,HG01170,NA19463,HG01072,HG01073,HG01079,HG01375,HG01374,NA18530,HG00513,NA18536,NA19312,NA18534,HG00330,HG00331,HG00324,NA20510,HG00321,HG00276,HG01204,HG01365,NA18621,NA18620,HG01350,HG00607,HG00334,HG00337,HG01351,NA19657,HG00584,HG00338,HG00581,HG00580,NA19720,HG00500,NA18635,HG00463,HG00464,HG01498,HG00111,NA18637,NA18619,HG00619,HG00309,HG01107,HG00590,HG01101,HG01183,HG00690,HG00699,NA18606,HG00125,HG00124,NA19834,HG00123,HG00442,HG00443,NA18599,HG00251,HG00250,NA18595,HG01462,NA18597,HG00315,HG00310,HG01136,HG01334,HG00478,NA18519,NA18574,HG00256,HG01124,HG01125,NA12043,NA18990,HG01080,NA18910,HG00369,HG00318,HG00249,HG00437,HG00436,HG00346,HG00534,HG00734,HG00533;num_samples_tested=1822;frequency=7.03%;num_unique_samples_tested=1822;nr_frequency=7.02%;PopulationSummary=European 36:Asian 60:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 24:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4436028	4436028	.	.	.	ID=gssv615;Name=gssv615;variant_type=CNV;variant_sub_type=Loss;outer_start=4436028;inner_start=4436046;inner_end=4436356;outer_end=4436357;inner_rank=8;num_variants=4;variants=essv9763950,essv6000199,essv6139564,essv6465373;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=4;samples=HG00257,sample_essv9763950,HG01375,HG00123;num_samples_tested=1822;frequency=0.22%;num_unique_samples_tested=1822;nr_frequency=0.21%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4436046	4436356	.	.	.	ID=gssv615;Name=gssv615;variant_type=CNV;variant_sub_type=Loss;outer_start=4436028;inner_start=4436046;inner_end=4436356;outer_end=4436357;inner_rank=8;num_variants=4;variants=essv9763950,essv6000199,essv6139564,essv6465373;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=4;samples=HG00257,sample_essv9763950,HG01375,HG00123;num_samples_tested=1822;frequency=0.22%;num_unique_samples_tested=1822;nr_frequency=0.21%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4436357	4436357	.	.	.	ID=gssv615;Name=gssv615;variant_type=CNV;variant_sub_type=Loss;outer_start=4436028;inner_start=4436046;inner_end=4436356;outer_end=4436357;inner_rank=8;num_variants=4;variants=essv9763950,essv6000199,essv6139564,essv6465373;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=4;samples=HG00257,sample_essv9763950,HG01375,HG00123;num_samples_tested=1822;frequency=0.22%;num_unique_samples_tested=1822;nr_frequency=0.21%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2390764	2390764	.	.	.	ID=gssv622;Name=gssv622;variant_type=CNV;variant_sub_type=Loss;outer_start=2390764;inner_start=2390805;inner_end=2391051;outer_end=2391052;inner_rank=8;num_variants=133;variants=essv5403060,essv5415337,essv5425402,essv5438814,essv5447025,essv5448530,essv5456432,essv5471300,essv5475603,essv5476099,essv5478507,essv5492017,essv5501976,essv5505273,essv5505829,essv5506006,essv5519029,essv5519074,essv5538311,essv5538854,essv5546308,essv5547485,essv5551010,essv5551104,essv5551336,essv5555656,essv5558047,essv5563893,essv5575722,essv5581589,essv5598418,essv5602357,essv5613929,essv5613982,essv5631318,essv5640198,essv5684170,essv5684887,essv5688839,essv5689636,essv5710726,essv5726242,essv5735619,essv5738711,essv5744948,essv5753449,essv5755072,essv5775590,essv5780323,essv5804372,essv5807802,essv5809808,essv5815536,essv5821058,essv5825375,essv5835922,essv5843562,essv5844195,essv5859906,essv5865427,essv5875862,essv5879513,essv5887270,essv5897044,essv5914379,essv5914838,essv5920836,essv5923266,essv5929017,essv5934369,essv5948931,essv5963925,essv5964575,essv5984136,essv5987314,essv5990143,essv5994541,essv5995244,essv6014555,essv6015336,essv6029442,essv6051290,essv6055830,essv6057284,essv6057652,essv6068947,essv6072856,essv6081812,essv6090319,essv6090639,essv6096498,essv6105477,essv6107284,essv6123846,essv6141211,essv6180823,essv6185226,essv6203532,essv6219456,essv6221066,essv6224671,essv6226517,essv6238640,essv6247847,essv6281611,essv6284888,essv6296062,essv6318976,essv6325270,essv6363664,essv6364378,essv6365388,essv6394630,essv6406748,essv6409825,essv6409874,essv6416104,essv6425849,essv6459378,essv6475241,essv6486007,essv6494753,essv6504100,essv6512160,essv6519149,essv6536705,essv6540434,essv6544336,essv6551632,essv6551924,essv6569569,essv6577821,essv9759173;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=133;samples=NA18566,NA18596,HG00654,NA19770,HG01441,HG01440,HG00704,HG00275,HG00274,HG00277,HG00276,HG00278,HG00375,HG00427,HG00421,HG00422,HG00543,NA18613,NA18557,HG00345,HG00651,HG00346,HG00342,HG00159,HG00268,HG00260,HG00261,HG01066,NA19374,HG01061,HG01060,HG00419,HG00418,HG01069,HG00557,NA18549,NA18542,NA18543,HG01171,HG01170,NA18964,NA19379,HG01070,NA19372,HG01375,HG01374,HG00280,HG00281,HG00282,HG00284,NA18532,HG00513,HG00327,NA12003,HG00323,HG01353,HG00321,HG00320,NA20543,HG00479,HG00478,HG01390,HG01048,NA18624,NA18623,HG00476,NA18621,NA18610,HG01488,HG01204,HG00662,HG00663,HG00334,HG00335,HG01357,HG00337,HG01350,HG00589,HG00584,HG00338,HG00339,HG00581,HG00740,HG00501,HG00500,NA18636,HG01055,HG01052,HG00185,NA18633,NA19257,HG01107,HG00613,HG01101,HG01102,HG00693,HG00692,HG00690,HG00699,HG00125,HG00124,HG00256,HG00254,NA18599,HG00252,HG00318,HG00250,HG01462,HG00448,HG00315,HG00313,HG00310,HG00258,HG00684,HG01334,HG00524,NA18572,NA18570,HG00138,HG00139,HG00253,HG00136,HG01080,HG01083,HG01082,HG00251,HG00249,HG00437,HG00650,sample_essv9759173,HG00536,HG00537,NA18597;num_samples_tested=1822;frequency=7.3%;num_unique_samples_tested=1822;nr_frequency=7.29%;PopulationSummary=European 48:Asian 52:Mexican 1:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 28:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2390805	2391051	.	.	.	ID=gssv622;Name=gssv622;variant_type=CNV;variant_sub_type=Loss;outer_start=2390764;inner_start=2390805;inner_end=2391051;outer_end=2391052;inner_rank=8;num_variants=133;variants=essv5403060,essv5415337,essv5425402,essv5438814,essv5447025,essv5448530,essv5456432,essv5471300,essv5475603,essv5476099,essv5478507,essv5492017,essv5501976,essv5505273,essv5505829,essv5506006,essv5519029,essv5519074,essv5538311,essv5538854,essv5546308,essv5547485,essv5551010,essv5551104,essv5551336,essv5555656,essv5558047,essv5563893,essv5575722,essv5581589,essv5598418,essv5602357,essv5613929,essv5613982,essv5631318,essv5640198,essv5684170,essv5684887,essv5688839,essv5689636,essv5710726,essv5726242,essv5735619,essv5738711,essv5744948,essv5753449,essv5755072,essv5775590,essv5780323,essv5804372,essv5807802,essv5809808,essv5815536,essv5821058,essv5825375,essv5835922,essv5843562,essv5844195,essv5859906,essv5865427,essv5875862,essv5879513,essv5887270,essv5897044,essv5914379,essv5914838,essv5920836,essv5923266,essv5929017,essv5934369,essv5948931,essv5963925,essv5964575,essv5984136,essv5987314,essv5990143,essv5994541,essv5995244,essv6014555,essv6015336,essv6029442,essv6051290,essv6055830,essv6057284,essv6057652,essv6068947,essv6072856,essv6081812,essv6090319,essv6090639,essv6096498,essv6105477,essv6107284,essv6123846,essv6141211,essv6180823,essv6185226,essv6203532,essv6219456,essv6221066,essv6224671,essv6226517,essv6238640,essv6247847,essv6281611,essv6284888,essv6296062,essv6318976,essv6325270,essv6363664,essv6364378,essv6365388,essv6394630,essv6406748,essv6409825,essv6409874,essv6416104,essv6425849,essv6459378,essv6475241,essv6486007,essv6494753,essv6504100,essv6512160,essv6519149,essv6536705,essv6540434,essv6544336,essv6551632,essv6551924,essv6569569,essv6577821,essv9759173;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=133;samples=NA18566,NA18596,HG00654,NA19770,HG01441,HG01440,HG00704,HG00275,HG00274,HG00277,HG00276,HG00278,HG00375,HG00427,HG00421,HG00422,HG00543,NA18613,NA18557,HG00345,HG00651,HG00346,HG00342,HG00159,HG00268,HG00260,HG00261,HG01066,NA19374,HG01061,HG01060,HG00419,HG00418,HG01069,HG00557,NA18549,NA18542,NA18543,HG01171,HG01170,NA18964,NA19379,HG01070,NA19372,HG01375,HG01374,HG00280,HG00281,HG00282,HG00284,NA18532,HG00513,HG00327,NA12003,HG00323,HG01353,HG00321,HG00320,NA20543,HG00479,HG00478,HG01390,HG01048,NA18624,NA18623,HG00476,NA18621,NA18610,HG01488,HG01204,HG00662,HG00663,HG00334,HG00335,HG01357,HG00337,HG01350,HG00589,HG00584,HG00338,HG00339,HG00581,HG00740,HG00501,HG00500,NA18636,HG01055,HG01052,HG00185,NA18633,NA19257,HG01107,HG00613,HG01101,HG01102,HG00693,HG00692,HG00690,HG00699,HG00125,HG00124,HG00256,HG00254,NA18599,HG00252,HG00318,HG00250,HG01462,HG00448,HG00315,HG00313,HG00310,HG00258,HG00684,HG01334,HG00524,NA18572,NA18570,HG00138,HG00139,HG00253,HG00136,HG01080,HG01083,HG01082,HG00251,HG00249,HG00437,HG00650,sample_essv9759173,HG00536,HG00537,NA18597;num_samples_tested=1822;frequency=7.3%;num_unique_samples_tested=1822;nr_frequency=7.29%;PopulationSummary=European 48:Asian 52:Mexican 1:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 28:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	2391052	2391052	.	.	.	ID=gssv622;Name=gssv622;variant_type=CNV;variant_sub_type=Loss;outer_start=2390764;inner_start=2390805;inner_end=2391051;outer_end=2391052;inner_rank=8;num_variants=133;variants=essv5403060,essv5415337,essv5425402,essv5438814,essv5447025,essv5448530,essv5456432,essv5471300,essv5475603,essv5476099,essv5478507,essv5492017,essv5501976,essv5505273,essv5505829,essv5506006,essv5519029,essv5519074,essv5538311,essv5538854,essv5546308,essv5547485,essv5551010,essv5551104,essv5551336,essv5555656,essv5558047,essv5563893,essv5575722,essv5581589,essv5598418,essv5602357,essv5613929,essv5613982,essv5631318,essv5640198,essv5684170,essv5684887,essv5688839,essv5689636,essv5710726,essv5726242,essv5735619,essv5738711,essv5744948,essv5753449,essv5755072,essv5775590,essv5780323,essv5804372,essv5807802,essv5809808,essv5815536,essv5821058,essv5825375,essv5835922,essv5843562,essv5844195,essv5859906,essv5865427,essv5875862,essv5879513,essv5887270,essv5897044,essv5914379,essv5914838,essv5920836,essv5923266,essv5929017,essv5934369,essv5948931,essv5963925,essv5964575,essv5984136,essv5987314,essv5990143,essv5994541,essv5995244,essv6014555,essv6015336,essv6029442,essv6051290,essv6055830,essv6057284,essv6057652,essv6068947,essv6072856,essv6081812,essv6090319,essv6090639,essv6096498,essv6105477,essv6107284,essv6123846,essv6141211,essv6180823,essv6185226,essv6203532,essv6219456,essv6221066,essv6224671,essv6226517,essv6238640,essv6247847,essv6281611,essv6284888,essv6296062,essv6318976,essv6325270,essv6363664,essv6364378,essv6365388,essv6394630,essv6406748,essv6409825,essv6409874,essv6416104,essv6425849,essv6459378,essv6475241,essv6486007,essv6494753,essv6504100,essv6512160,essv6519149,essv6536705,essv6540434,essv6544336,essv6551632,essv6551924,essv6569569,essv6577821,essv9759173;num_studies=2;studies=Boomsma2014,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=133;samples=NA18566,NA18596,HG00654,NA19770,HG01441,HG01440,HG00704,HG00275,HG00274,HG00277,HG00276,HG00278,HG00375,HG00427,HG00421,HG00422,HG00543,NA18613,NA18557,HG00345,HG00651,HG00346,HG00342,HG00159,HG00268,HG00260,HG00261,HG01066,NA19374,HG01061,HG01060,HG00419,HG00418,HG01069,HG00557,NA18549,NA18542,NA18543,HG01171,HG01170,NA18964,NA19379,HG01070,NA19372,HG01375,HG01374,HG00280,HG00281,HG00282,HG00284,NA18532,HG00513,HG00327,NA12003,HG00323,HG01353,HG00321,HG00320,NA20543,HG00479,HG00478,HG01390,HG01048,NA18624,NA18623,HG00476,NA18621,NA18610,HG01488,HG01204,HG00662,HG00663,HG00334,HG00335,HG01357,HG00337,HG01350,HG00589,HG00584,HG00338,HG00339,HG00581,HG00740,HG00501,HG00500,NA18636,HG01055,HG01052,HG00185,NA18633,NA19257,HG01107,HG00613,HG01101,HG01102,HG00693,HG00692,HG00690,HG00699,HG00125,HG00124,HG00256,HG00254,NA18599,HG00252,HG00318,HG00250,HG01462,HG00448,HG00315,HG00313,HG00310,HG00258,HG00684,HG01334,HG00524,NA18572,NA18570,HG00138,HG00139,HG00253,HG00136,HG01080,HG01083,HG01082,HG00251,HG00249,HG00437,HG00650,sample_essv9759173,HG00536,HG00537,NA18597;num_samples_tested=1822;frequency=7.3%;num_unique_samples_tested=1822;nr_frequency=7.29%;PopulationSummary=European 48:Asian 52:Mexican 1:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 28:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4676496	4676496	.	.	.	ID=gssv639;Name=gssv639;variant_type=CNV;variant_sub_type=Loss;outer_start=4676496;inner_start=4676496;inner_end=4676644;outer_end=4676645;inner_rank=8;num_variants=183;variants=essv9764172,essv5407800,essv5407868,essv5412484,essv5434102,essv5434110,essv5434435,essv5445628,essv5446984,essv5451670,essv5455064,essv5466375,essv5488638,essv5488930,essv5490017,essv5491259,essv5492548,essv5494920,essv5504528,essv5525380,essv5531218,essv5532520,essv5545152,essv5549301,essv5565994,essv5586772,essv5588715,essv5590110,essv5595406,essv5621909,essv5624213,essv5625990,essv5628346,essv5628805,essv5628898,essv5636975,essv5640486,essv5651641,essv5656641,essv5666262,essv5669101,essv5669835,essv5679766,essv5680392,essv5690322,essv5690863,essv5692595,essv5700422,essv5708378,essv5718450,essv5737114,essv5738365,essv5743042,essv5755317,essv5764573,essv5768132,essv5772039,essv5773359,essv5790060,essv5796451,essv5812387,essv5817691,essv5821408,essv5823142,essv5833924,essv5849873,essv5852026,essv5858536,essv5867660,essv5869103,essv5881960,essv5895546,essv5906173,essv5909082,essv5911545,essv5912276,essv5917912,essv5918827,essv5923630,essv5934882,essv5935021,essv5935035,essv5948491,essv5956711,essv5970293,essv5990605,essv5991829,essv5991881,essv5996438,essv5999686,essv6003061,essv6004021,essv6005288,essv6011694,essv6013490,essv6024062,essv6029957,essv6035492,essv6039205,essv6045522,essv6058464,essv6064479,essv6082959,essv6088752,essv6099242,essv6103413,essv6106046,essv6111236,essv6127008,essv6129356,essv6130018,essv6133000,essv6147526,essv6149495,essv6150504,essv6156671,essv6157654,essv6160512,essv6165117,essv6167600,essv6169913,essv6170218,essv6177835,essv6185984,essv6187654,essv6194615,essv6198829,essv6200790,essv6201371,essv6210893,essv6220185,essv6235618,essv6256947,essv6261916,essv6276284,essv6279379,essv6288614,essv6300955,essv6303440,essv6307983,essv6313667,essv6320726,essv6323215,essv6325599,essv6326323,essv6351731,essv6352455,essv6360320,essv6362493,essv6386889,essv6396763,essv6401699,essv6410115,essv6412559,essv6418000,essv6420799,essv6440247,essv6452512,essv6462194,essv6462347,essv6465232,essv6469110,essv6469647,essv6477773,essv6485722,essv6492515,essv6494304,essv6495919,essv6510967,essv6514653,essv6520463,essv6522193,essv6524956,essv6536116,essv6549251,essv6551775,essv6551957,essv6561280,essv6570959,essv6578430,essv6580955,essv6587508,essv6589744;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=183;samples=NA18566,NA18985,NA18561,NA18980,NA18563,NA18989,NA18867,NA07051,NA12546,NA18624,HG01097,HG00628,HG00705,HG00375,HG00442,HG00421,NA19359,NA19116,NA18553,HG00513,NA18559,HG00683,NA18870,HG00690,HG00657,NA18874,NA19088,NA20287,NA20282,NA18487,NA18486,NA18488,NA18977,NA18596,NA18974,NA19207,NA19077,NA19070,NA19471,NA19473,HG01440,HG00620,NA18549,NA18546,NA18547,NA19712,NA18545,NA19147,NA18541,NA18538,NA19383,NA19382,NA19381,NA19380,NA12889,NA19000,HG01177,HG01171,NA18968,NA19462,HG01066,NA18960,NA18961,NA18963,NA18517,NA19379,NA19066,NA19065,NA19068,NA19198,NA19374,NA19375,NA19004,NA19007,NA19318,NA19319,NA19002,NA19315,NA18530,NA19312,NA18951,NA19391,NA18953,NA18952,sample_essv9764172,HG00672,NA20544,HG00478,NA18628,HG00473,NA20278,HG00475,NA18620,NA18523,NA19324,NA18526,NA18941,NA18944,NA19818,NA18949,HG01354,NA19439,HG00583,NA18638,NA19722,NA19084,NA19085,NA18532,NA18637,NA19080,NA18631,NA18632,NA18633,NA19239,NA19189,NA19625,HG00114,NA20819,NA19087,NA18933,HG00619,NA18544,NA19434,HG00614,NA19431,HG00611,HG00693,HG00692,HG00512,NA20528,NA19240,NA18605,HG00699,NA20581,NA19082,NA19057,HG01073,NA19055,NA19054,NA18552,HG00125,NA19834,NA18616,NA19428,NA18612,NA18613,NA18610,NA18595,HG00607,NA12891,HG00684,NA19334,NA18511,HG00524,NA19331,HG00689,NA19346,HG00534,NA18573,NA18572,NA18571,NA19985,NA19210,NA19213,NA19982,NA18991,HG00608,HG00136,NA19455,HG01083,NA18912,NA20505,HG00637,HG00437,NA19347,NA19108,HG00536,HG00731,NA19107,NA20502,NA19453,HG00530,NA19102;num_samples_tested=1822;frequency=10.04%;num_unique_samples_tested=1822;nr_frequency=10.04%;PopulationSummary=European 15:Asian 98:Mexican 1:African 59:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 10:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4676496	4676644	.	.	.	ID=gssv639;Name=gssv639;variant_type=CNV;variant_sub_type=Loss;outer_start=4676496;inner_start=4676496;inner_end=4676644;outer_end=4676645;inner_rank=8;num_variants=183;variants=essv9764172,essv5407800,essv5407868,essv5412484,essv5434102,essv5434110,essv5434435,essv5445628,essv5446984,essv5451670,essv5455064,essv5466375,essv5488638,essv5488930,essv5490017,essv5491259,essv5492548,essv5494920,essv5504528,essv5525380,essv5531218,essv5532520,essv5545152,essv5549301,essv5565994,essv5586772,essv5588715,essv5590110,essv5595406,essv5621909,essv5624213,essv5625990,essv5628346,essv5628805,essv5628898,essv5636975,essv5640486,essv5651641,essv5656641,essv5666262,essv5669101,essv5669835,essv5679766,essv5680392,essv5690322,essv5690863,essv5692595,essv5700422,essv5708378,essv5718450,essv5737114,essv5738365,essv5743042,essv5755317,essv5764573,essv5768132,essv5772039,essv5773359,essv5790060,essv5796451,essv5812387,essv5817691,essv5821408,essv5823142,essv5833924,essv5849873,essv5852026,essv5858536,essv5867660,essv5869103,essv5881960,essv5895546,essv5906173,essv5909082,essv5911545,essv5912276,essv5917912,essv5918827,essv5923630,essv5934882,essv5935021,essv5935035,essv5948491,essv5956711,essv5970293,essv5990605,essv5991829,essv5991881,essv5996438,essv5999686,essv6003061,essv6004021,essv6005288,essv6011694,essv6013490,essv6024062,essv6029957,essv6035492,essv6039205,essv6045522,essv6058464,essv6064479,essv6082959,essv6088752,essv6099242,essv6103413,essv6106046,essv6111236,essv6127008,essv6129356,essv6130018,essv6133000,essv6147526,essv6149495,essv6150504,essv6156671,essv6157654,essv6160512,essv6165117,essv6167600,essv6169913,essv6170218,essv6177835,essv6185984,essv6187654,essv6194615,essv6198829,essv6200790,essv6201371,essv6210893,essv6220185,essv6235618,essv6256947,essv6261916,essv6276284,essv6279379,essv6288614,essv6300955,essv6303440,essv6307983,essv6313667,essv6320726,essv6323215,essv6325599,essv6326323,essv6351731,essv6352455,essv6360320,essv6362493,essv6386889,essv6396763,essv6401699,essv6410115,essv6412559,essv6418000,essv6420799,essv6440247,essv6452512,essv6462194,essv6462347,essv6465232,essv6469110,essv6469647,essv6477773,essv6485722,essv6492515,essv6494304,essv6495919,essv6510967,essv6514653,essv6520463,essv6522193,essv6524956,essv6536116,essv6549251,essv6551775,essv6551957,essv6561280,essv6570959,essv6578430,essv6580955,essv6587508,essv6589744;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=183;samples=NA18566,NA18985,NA18561,NA18980,NA18563,NA18989,NA18867,NA07051,NA12546,NA18624,HG01097,HG00628,HG00705,HG00375,HG00442,HG00421,NA19359,NA19116,NA18553,HG00513,NA18559,HG00683,NA18870,HG00690,HG00657,NA18874,NA19088,NA20287,NA20282,NA18487,NA18486,NA18488,NA18977,NA18596,NA18974,NA19207,NA19077,NA19070,NA19471,NA19473,HG01440,HG00620,NA18549,NA18546,NA18547,NA19712,NA18545,NA19147,NA18541,NA18538,NA19383,NA19382,NA19381,NA19380,NA12889,NA19000,HG01177,HG01171,NA18968,NA19462,HG01066,NA18960,NA18961,NA18963,NA18517,NA19379,NA19066,NA19065,NA19068,NA19198,NA19374,NA19375,NA19004,NA19007,NA19318,NA19319,NA19002,NA19315,NA18530,NA19312,NA18951,NA19391,NA18953,NA18952,sample_essv9764172,HG00672,NA20544,HG00478,NA18628,HG00473,NA20278,HG00475,NA18620,NA18523,NA19324,NA18526,NA18941,NA18944,NA19818,NA18949,HG01354,NA19439,HG00583,NA18638,NA19722,NA19084,NA19085,NA18532,NA18637,NA19080,NA18631,NA18632,NA18633,NA19239,NA19189,NA19625,HG00114,NA20819,NA19087,NA18933,HG00619,NA18544,NA19434,HG00614,NA19431,HG00611,HG00693,HG00692,HG00512,NA20528,NA19240,NA18605,HG00699,NA20581,NA19082,NA19057,HG01073,NA19055,NA19054,NA18552,HG00125,NA19834,NA18616,NA19428,NA18612,NA18613,NA18610,NA18595,HG00607,NA12891,HG00684,NA19334,NA18511,HG00524,NA19331,HG00689,NA19346,HG00534,NA18573,NA18572,NA18571,NA19985,NA19210,NA19213,NA19982,NA18991,HG00608,HG00136,NA19455,HG01083,NA18912,NA20505,HG00637,HG00437,NA19347,NA19108,HG00536,HG00731,NA19107,NA20502,NA19453,HG00530,NA19102;num_samples_tested=1822;frequency=10.04%;num_unique_samples_tested=1822;nr_frequency=10.04%;PopulationSummary=European 15:Asian 98:Mexican 1:African 59:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 10:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4676645	4676645	.	.	.	ID=gssv639;Name=gssv639;variant_type=CNV;variant_sub_type=Loss;outer_start=4676496;inner_start=4676496;inner_end=4676644;outer_end=4676645;inner_rank=8;num_variants=183;variants=essv9764172,essv5407800,essv5407868,essv5412484,essv5434102,essv5434110,essv5434435,essv5445628,essv5446984,essv5451670,essv5455064,essv5466375,essv5488638,essv5488930,essv5490017,essv5491259,essv5492548,essv5494920,essv5504528,essv5525380,essv5531218,essv5532520,essv5545152,essv5549301,essv5565994,essv5586772,essv5588715,essv5590110,essv5595406,essv5621909,essv5624213,essv5625990,essv5628346,essv5628805,essv5628898,essv5636975,essv5640486,essv5651641,essv5656641,essv5666262,essv5669101,essv5669835,essv5679766,essv5680392,essv5690322,essv5690863,essv5692595,essv5700422,essv5708378,essv5718450,essv5737114,essv5738365,essv5743042,essv5755317,essv5764573,essv5768132,essv5772039,essv5773359,essv5790060,essv5796451,essv5812387,essv5817691,essv5821408,essv5823142,essv5833924,essv5849873,essv5852026,essv5858536,essv5867660,essv5869103,essv5881960,essv5895546,essv5906173,essv5909082,essv5911545,essv5912276,essv5917912,essv5918827,essv5923630,essv5934882,essv5935021,essv5935035,essv5948491,essv5956711,essv5970293,essv5990605,essv5991829,essv5991881,essv5996438,essv5999686,essv6003061,essv6004021,essv6005288,essv6011694,essv6013490,essv6024062,essv6029957,essv6035492,essv6039205,essv6045522,essv6058464,essv6064479,essv6082959,essv6088752,essv6099242,essv6103413,essv6106046,essv6111236,essv6127008,essv6129356,essv6130018,essv6133000,essv6147526,essv6149495,essv6150504,essv6156671,essv6157654,essv6160512,essv6165117,essv6167600,essv6169913,essv6170218,essv6177835,essv6185984,essv6187654,essv6194615,essv6198829,essv6200790,essv6201371,essv6210893,essv6220185,essv6235618,essv6256947,essv6261916,essv6276284,essv6279379,essv6288614,essv6300955,essv6303440,essv6307983,essv6313667,essv6320726,essv6323215,essv6325599,essv6326323,essv6351731,essv6352455,essv6360320,essv6362493,essv6386889,essv6396763,essv6401699,essv6410115,essv6412559,essv6418000,essv6420799,essv6440247,essv6452512,essv6462194,essv6462347,essv6465232,essv6469110,essv6469647,essv6477773,essv6485722,essv6492515,essv6494304,essv6495919,essv6510967,essv6514653,essv6520463,essv6522193,essv6524956,essv6536116,essv6549251,essv6551775,essv6551957,essv6561280,essv6570959,essv6578430,essv6580955,essv6587508,essv6589744;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=183;samples=NA18566,NA18985,NA18561,NA18980,NA18563,NA18989,NA18867,NA07051,NA12546,NA18624,HG01097,HG00628,HG00705,HG00375,HG00442,HG00421,NA19359,NA19116,NA18553,HG00513,NA18559,HG00683,NA18870,HG00690,HG00657,NA18874,NA19088,NA20287,NA20282,NA18487,NA18486,NA18488,NA18977,NA18596,NA18974,NA19207,NA19077,NA19070,NA19471,NA19473,HG01440,HG00620,NA18549,NA18546,NA18547,NA19712,NA18545,NA19147,NA18541,NA18538,NA19383,NA19382,NA19381,NA19380,NA12889,NA19000,HG01177,HG01171,NA18968,NA19462,HG01066,NA18960,NA18961,NA18963,NA18517,NA19379,NA19066,NA19065,NA19068,NA19198,NA19374,NA19375,NA19004,NA19007,NA19318,NA19319,NA19002,NA19315,NA18530,NA19312,NA18951,NA19391,NA18953,NA18952,sample_essv9764172,HG00672,NA20544,HG00478,NA18628,HG00473,NA20278,HG00475,NA18620,NA18523,NA19324,NA18526,NA18941,NA18944,NA19818,NA18949,HG01354,NA19439,HG00583,NA18638,NA19722,NA19084,NA19085,NA18532,NA18637,NA19080,NA18631,NA18632,NA18633,NA19239,NA19189,NA19625,HG00114,NA20819,NA19087,NA18933,HG00619,NA18544,NA19434,HG00614,NA19431,HG00611,HG00693,HG00692,HG00512,NA20528,NA19240,NA18605,HG00699,NA20581,NA19082,NA19057,HG01073,NA19055,NA19054,NA18552,HG00125,NA19834,NA18616,NA19428,NA18612,NA18613,NA18610,NA18595,HG00607,NA12891,HG00684,NA19334,NA18511,HG00524,NA19331,HG00689,NA19346,HG00534,NA18573,NA18572,NA18571,NA19985,NA19210,NA19213,NA19982,NA18991,HG00608,HG00136,NA19455,HG01083,NA18912,NA20505,HG00637,HG00437,NA19347,NA19108,HG00536,HG00731,NA19107,NA20502,NA19453,HG00530,NA19102;num_samples_tested=1822;frequency=10.04%;num_unique_samples_tested=1822;nr_frequency=10.04%;PopulationSummary=European 15:Asian 98:Mexican 1:African 59:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 10:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4059835	4059835	.	.	.	ID=gssv649;Name=gssv649;variant_type=CNV;variant_sub_type=Loss;outer_start=4059835;inner_start=4059835;inner_end=4059953;outer_end=4059953;inner_rank=1;num_variants=2;variants=essv3880229,nssv177741;num_studies=2;studies=Mills2006,Levy2007;num_platforms=1;platforms=SangerSequencing;num_algorithms=2;algorithms=AssemblyComparison,SplitRead;num_samples=2;samples=HuRef,n/a;num_samples_tested=25;frequency=8%;num_unique_samples_tested=25;nr_frequency=8%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4059835	4059953	.	.	.	ID=gssv649;Name=gssv649;variant_type=CNV;variant_sub_type=Loss;outer_start=4059835;inner_start=4059835;inner_end=4059953;outer_end=4059953;inner_rank=1;num_variants=2;variants=essv3880229,nssv177741;num_studies=2;studies=Mills2006,Levy2007;num_platforms=1;platforms=SangerSequencing;num_algorithms=2;algorithms=AssemblyComparison,SplitRead;num_samples=2;samples=HuRef,n/a;num_samples_tested=25;frequency=8%;num_unique_samples_tested=25;nr_frequency=8%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4059953	4059953	.	.	.	ID=gssv649;Name=gssv649;variant_type=CNV;variant_sub_type=Loss;outer_start=4059835;inner_start=4059835;inner_end=4059953;outer_end=4059953;inner_rank=1;num_variants=2;variants=essv3880229,nssv177741;num_studies=2;studies=Mills2006,Levy2007;num_platforms=1;platforms=SangerSequencing;num_algorithms=2;algorithms=AssemblyComparison,SplitRead;num_samples=2;samples=HuRef,n/a;num_samples_tested=25;frequency=8%;num_unique_samples_tested=25;nr_frequency=8%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4204667	4204667	.	.	.	ID=gssv679;Name=gssv679;variant_type=CNV;variant_sub_type=Loss;outer_start=4204667;inner_start=4204671;inner_end=4204720;outer_end=4204724;inner_rank=6;num_variants=2;variants=essv9763395,essv5231288;num_studies=2;studies=McKernan2009,Boomsma2014;num_platforms=2;platforms=SOLiD,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,SplitRead;num_samples=2;samples=sample_essv9763395,NA18507;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4204671	4204720	.	.	.	ID=gssv679;Name=gssv679;variant_type=CNV;variant_sub_type=Loss;outer_start=4204667;inner_start=4204671;inner_end=4204720;outer_end=4204724;inner_rank=6;num_variants=2;variants=essv9763395,essv5231288;num_studies=2;studies=McKernan2009,Boomsma2014;num_platforms=2;platforms=SOLiD,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,SplitRead;num_samples=2;samples=sample_essv9763395,NA18507;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4204724	4204724	.	.	.	ID=gssv679;Name=gssv679;variant_type=CNV;variant_sub_type=Loss;outer_start=4204667;inner_start=4204671;inner_end=4204720;outer_end=4204724;inner_rank=6;num_variants=2;variants=essv9763395,essv5231288;num_studies=2;studies=McKernan2009,Boomsma2014;num_platforms=2;platforms=SOLiD,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,SplitRead;num_samples=2;samples=sample_essv9763395,NA18507;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4882138	4882138	.	.	.	ID=gssv707;Name=gssv707;variant_type=CNV;variant_sub_type=Loss;outer_start=4882138;inner_start=4882236;inner_end=4883038;outer_end=4883040;inner_rank=8;num_variants=107;variants=essv5569496,essv5818730,essv6238863,essv6379432,essv9845058,essv9845059,essv9845060,essv9845061,essv9845062,essv9845063,essv9845064,essv9845065,essv9845066,essv9845067,essv9845068,essv9845069,essv9845070,essv9845071,essv9845072,essv9845073,essv9845074,essv9845075,essv9845076,essv9845077,essv9845078,essv9845079,essv9845080,essv9845081,essv9845082,essv9845083,essv9845084,essv9845085,essv9845086,essv9845087,essv9845088,essv9845089,essv9845090,essv9845091,essv9845092,essv9845093,essv9845094,essv9845095,essv9845096,essv9845097,essv9845098,essv9845099,essv9845100,essv9845101,essv9845102,essv9845103,essv9845104,essv9845105,essv9845106,essv9845107,essv9845108,essv9845109,essv9845110,essv9845111,essv9845112,essv9845113,essv9845114,essv9845115,essv9845116,essv9845117,essv9845118,essv9845119,essv9845120,essv9845121,essv9845122,essv9845123,essv9845124,essv9845125,essv9845126,essv9845127,essv9845128,essv9845129,essv9845130,essv9845131,essv9845132,essv9845133,essv9845134,essv9845135,essv9845136,essv9845137,essv9845138,essv9845139,essv9845140,essv9845141,essv9845142,essv9845143,essv9845144,essv9845145,essv9845146,essv9845147,essv9845148,essv9845149,essv9845150,essv9845151,essv9845152,essv9845153,essv9764506,essv5480494,essv5522947,essv5896127,essv6000845,essv6367720,essv6474117;num_studies=3;studies=Boomsma2014,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=98;samples=HG02736,NA20904,HG02734,HG00625,HG03771,NA20900,HG03772,HG03603,HG03680,HG03689,HG04096,HG04099,NA20852,HG03767,HG03765,HG02070,HG03692,HG04216,HG04212,HG00150,NA21103,HG00418,NA21108,NA20845,HG01589,sample_essv9764506,HG03793,HG04177,HG03012,HG01773,HG03995,HG03991,HG03990,HG03851,HG03491,NA19003,HG04060,HG03789,HG02601,HG02494,HG03780,HG03908,HG03679,HG03905,HG02688,HG02687,HG03863,HG03866,NA11995,HG04059,HG03731,HG03730,HG03870,HG03871,HG03640,HG03645,HG03644,HG03646,HG03977,HG03973,HG03488,HG01811,HG03706,HG03022,NA20894,HG03805,NA20890,HG03808,HG03969,HG03967,HG03960,NA21144,HG03963,HG04131,HG03673,HG02651,HG00256,HG03812,NA20887,HG04039,HG03757,HG03755,HG02790,HG02792,HG03953,HG04141,NA18990,HG03947,HG00251,HG03940,NA20882,HG03824,HG04026,HG03744,HG03745,HG02190,HG04023,NA20905;num_samples_tested=4326;frequency=2.27%;num_unique_samples_tested=3329;nr_frequency=2.94%;PopulationSummary=European 6:Asian 80:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 12:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4882236	4883038	.	.	.	ID=gssv707;Name=gssv707;variant_type=CNV;variant_sub_type=Loss;outer_start=4882138;inner_start=4882236;inner_end=4883038;outer_end=4883040;inner_rank=8;num_variants=107;variants=essv5569496,essv5818730,essv6238863,essv6379432,essv9845058,essv9845059,essv9845060,essv9845061,essv9845062,essv9845063,essv9845064,essv9845065,essv9845066,essv9845067,essv9845068,essv9845069,essv9845070,essv9845071,essv9845072,essv9845073,essv9845074,essv9845075,essv9845076,essv9845077,essv9845078,essv9845079,essv9845080,essv9845081,essv9845082,essv9845083,essv9845084,essv9845085,essv9845086,essv9845087,essv9845088,essv9845089,essv9845090,essv9845091,essv9845092,essv9845093,essv9845094,essv9845095,essv9845096,essv9845097,essv9845098,essv9845099,essv9845100,essv9845101,essv9845102,essv9845103,essv9845104,essv9845105,essv9845106,essv9845107,essv9845108,essv9845109,essv9845110,essv9845111,essv9845112,essv9845113,essv9845114,essv9845115,essv9845116,essv9845117,essv9845118,essv9845119,essv9845120,essv9845121,essv9845122,essv9845123,essv9845124,essv9845125,essv9845126,essv9845127,essv9845128,essv9845129,essv9845130,essv9845131,essv9845132,essv9845133,essv9845134,essv9845135,essv9845136,essv9845137,essv9845138,essv9845139,essv9845140,essv9845141,essv9845142,essv9845143,essv9845144,essv9845145,essv9845146,essv9845147,essv9845148,essv9845149,essv9845150,essv9845151,essv9845152,essv9845153,essv9764506,essv5480494,essv5522947,essv5896127,essv6000845,essv6367720,essv6474117;num_studies=3;studies=Boomsma2014,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=98;samples=HG02736,NA20904,HG02734,HG00625,HG03771,NA20900,HG03772,HG03603,HG03680,HG03689,HG04096,HG04099,NA20852,HG03767,HG03765,HG02070,HG03692,HG04216,HG04212,HG00150,NA21103,HG00418,NA21108,NA20845,HG01589,sample_essv9764506,HG03793,HG04177,HG03012,HG01773,HG03995,HG03991,HG03990,HG03851,HG03491,NA19003,HG04060,HG03789,HG02601,HG02494,HG03780,HG03908,HG03679,HG03905,HG02688,HG02687,HG03863,HG03866,NA11995,HG04059,HG03731,HG03730,HG03870,HG03871,HG03640,HG03645,HG03644,HG03646,HG03977,HG03973,HG03488,HG01811,HG03706,HG03022,NA20894,HG03805,NA20890,HG03808,HG03969,HG03967,HG03960,NA21144,HG03963,HG04131,HG03673,HG02651,HG00256,HG03812,NA20887,HG04039,HG03757,HG03755,HG02790,HG02792,HG03953,HG04141,NA18990,HG03947,HG00251,HG03940,NA20882,HG03824,HG04026,HG03744,HG03745,HG02190,HG04023,NA20905;num_samples_tested=4326;frequency=2.27%;num_unique_samples_tested=3329;nr_frequency=2.94%;PopulationSummary=European 6:Asian 80:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 12:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	4883040	4883040	.	.	.	ID=gssv707;Name=gssv707;variant_type=CNV;variant_sub_type=Loss;outer_start=4882138;inner_start=4882236;inner_end=4883038;outer_end=4883040;inner_rank=8;num_variants=107;variants=essv5569496,essv5818730,essv6238863,essv6379432,essv9845058,essv9845059,essv9845060,essv9845061,essv9845062,essv9845063,essv9845064,essv9845065,essv9845066,essv9845067,essv9845068,essv9845069,essv9845070,essv9845071,essv9845072,essv9845073,essv9845074,essv9845075,essv9845076,essv9845077,essv9845078,essv9845079,essv9845080,essv9845081,essv9845082,essv9845083,essv9845084,essv9845085,essv9845086,essv9845087,essv9845088,essv9845089,essv9845090,essv9845091,essv9845092,essv9845093,essv9845094,essv9845095,essv9845096,essv9845097,essv9845098,essv9845099,essv9845100,essv9845101,essv9845102,essv9845103,essv9845104,essv9845105,essv9845106,essv9845107,essv9845108,essv9845109,essv9845110,essv9845111,essv9845112,essv9845113,essv9845114,essv9845115,essv9845116,essv9845117,essv9845118,essv9845119,essv9845120,essv9845121,essv9845122,essv9845123,essv9845124,essv9845125,essv9845126,essv9845127,essv9845128,essv9845129,essv9845130,essv9845131,essv9845132,essv9845133,essv9845134,essv9845135,essv9845136,essv9845137,essv9845138,essv9845139,essv9845140,essv9845141,essv9845142,essv9845143,essv9845144,essv9845145,essv9845146,essv9845147,essv9845148,essv9845149,essv9845150,essv9845151,essv9845152,essv9845153,essv9764506,essv5480494,essv5522947,essv5896127,essv6000845,essv6367720,essv6474117;num_studies=3;studies=Boomsma2014,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=98;samples=HG02736,NA20904,HG02734,HG00625,HG03771,NA20900,HG03772,HG03603,HG03680,HG03689,HG04096,HG04099,NA20852,HG03767,HG03765,HG02070,HG03692,HG04216,HG04212,HG00150,NA21103,HG00418,NA21108,NA20845,HG01589,sample_essv9764506,HG03793,HG04177,HG03012,HG01773,HG03995,HG03991,HG03990,HG03851,HG03491,NA19003,HG04060,HG03789,HG02601,HG02494,HG03780,HG03908,HG03679,HG03905,HG02688,HG02687,HG03863,HG03866,NA11995,HG04059,HG03731,HG03730,HG03870,HG03871,HG03640,HG03645,HG03644,HG03646,HG03977,HG03973,HG03488,HG01811,HG03706,HG03022,NA20894,HG03805,NA20890,HG03808,HG03969,HG03967,HG03960,NA21144,HG03963,HG04131,HG03673,HG02651,HG00256,HG03812,NA20887,HG04039,HG03757,HG03755,HG02790,HG02792,HG03953,HG04141,NA18990,HG03947,HG00251,HG03940,NA20882,HG03824,HG04026,HG03744,HG03745,HG02190,HG04023,NA20905;num_samples_tested=4326;frequency=2.27%;num_unique_samples_tested=3329;nr_frequency=2.94%;PopulationSummary=European 6:Asian 80:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 12:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5028066	5028066	.	.	.	ID=gssv711;Name=gssv711;variant_type=CNV;variant_sub_type=Loss;outer_start=5028066;inner_start=5028128;inner_end=5057280;outer_end=5060238;inner_rank=8;num_variants=7;variants=essv7004916,essv5979890,essv5528211,essv9845156,essv7004913,essv7004914,essv7004915;num_studies=3;studies=Vogler2010,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Affymetrix6.0,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=RW_0164,NA19473,RW_0321,RW_0579,RW_0351;num_samples_tested=4668;frequency=0.11%;num_unique_samples_tested=3671;nr_frequency=0.13%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5028128	5057280	.	.	.	ID=gssv711;Name=gssv711;variant_type=CNV;variant_sub_type=Loss;outer_start=5028066;inner_start=5028128;inner_end=5057280;outer_end=5060238;inner_rank=8;num_variants=7;variants=essv7004916,essv5979890,essv5528211,essv9845156,essv7004913,essv7004914,essv7004915;num_studies=3;studies=Vogler2010,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Affymetrix6.0,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=RW_0164,NA19473,RW_0321,RW_0579,RW_0351;num_samples_tested=4668;frequency=0.11%;num_unique_samples_tested=3671;nr_frequency=0.13%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5060238	5060238	.	.	.	ID=gssv711;Name=gssv711;variant_type=CNV;variant_sub_type=Loss;outer_start=5028066;inner_start=5028128;inner_end=5057280;outer_end=5060238;inner_rank=8;num_variants=7;variants=essv7004916,essv5979890,essv5528211,essv9845156,essv7004913,essv7004914,essv7004915;num_studies=3;studies=Vogler2010,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Affymetrix6.0,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PennCNV+Birdseye,PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=RW_0164,NA19473,RW_0321,RW_0579,RW_0351;num_samples_tested=4668;frequency=0.11%;num_unique_samples_tested=3671;nr_frequency=0.13%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5112057	5112057	.	.	.	ID=gssv714;Name=gssv714;variant_type=CNV;variant_sub_type=Loss;outer_start=5112057;inner_start=5112984;inner_end=5173904;outer_end=5174005;inner_rank=14;num_variants=2;variants=nssv3696762,nssv708944;num_studies=2;studies=Cooper2011,WTCCC2(58C);num_platforms=2;platforms=Affymetrix_6.0,Custom_Illumina_1.2M;num_algorithms=1;algorithms=Custom_HMM;num_samples=2;samples=sample_nssv708944,sample_nssv3696762;num_samples_tested=3000;frequency=0.07%;num_unique_samples_tested=3000;nr_frequency=0.06%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5112984	5173904	.	.	.	ID=gssv714;Name=gssv714;variant_type=CNV;variant_sub_type=Loss;outer_start=5112057;inner_start=5112984;inner_end=5173904;outer_end=5174005;inner_rank=14;num_variants=2;variants=nssv3696762,nssv708944;num_studies=2;studies=Cooper2011,WTCCC2(58C);num_platforms=2;platforms=Affymetrix_6.0,Custom_Illumina_1.2M;num_algorithms=1;algorithms=Custom_HMM;num_samples=2;samples=sample_nssv708944,sample_nssv3696762;num_samples_tested=3000;frequency=0.07%;num_unique_samples_tested=3000;nr_frequency=0.06%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5174005	5174005	.	.	.	ID=gssv714;Name=gssv714;variant_type=CNV;variant_sub_type=Loss;outer_start=5112057;inner_start=5112984;inner_end=5173904;outer_end=5174005;inner_rank=14;num_variants=2;variants=nssv3696762,nssv708944;num_studies=2;studies=Cooper2011,WTCCC2(58C);num_platforms=2;platforms=Affymetrix_6.0,Custom_Illumina_1.2M;num_algorithms=1;algorithms=Custom_HMM;num_samples=2;samples=sample_nssv708944,sample_nssv3696762;num_samples_tested=3000;frequency=0.07%;num_unique_samples_tested=3000;nr_frequency=0.06%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5172334	5172334	.	.	.	ID=gssv717;Name=gssv717;variant_type=CNV;variant_sub_type=Loss;outer_start=5172334;inner_start=5172406;inner_end=5173484;outer_end=5173571;inner_rank=8;num_variants=20;variants=essv5720924,essv6291611,essv9845226,essv9845227,essv9845228,essv9845229,essv9845230,essv9845231,essv9845232,essv9845233,essv9845234,essv9845235,essv9845236,essv9845237,essv9845238,essv9845239,essv9845240,essv9845241,essv9845242,essv9845243;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=18;samples=HG01794,HG01597,NA18975,HG01850,HG02379,HG02035,HG00596,HG02384,HG02408,HG02373,HG00611,NA18618,HG00654,NA18639,NA18625,HG00533,NA18997,HG00698;num_samples_tested=3559;frequency=0.51%;num_unique_samples_tested=2562;nr_frequency=0.7%;PopulationSummary=European 0:Asian 18:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5172406	5173484	.	.	.	ID=gssv717;Name=gssv717;variant_type=CNV;variant_sub_type=Loss;outer_start=5172334;inner_start=5172406;inner_end=5173484;outer_end=5173571;inner_rank=8;num_variants=20;variants=essv5720924,essv6291611,essv9845226,essv9845227,essv9845228,essv9845229,essv9845230,essv9845231,essv9845232,essv9845233,essv9845234,essv9845235,essv9845236,essv9845237,essv9845238,essv9845239,essv9845240,essv9845241,essv9845242,essv9845243;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=18;samples=HG01794,HG01597,NA18975,HG01850,HG02379,HG02035,HG00596,HG02384,HG02408,HG02373,HG00611,NA18618,HG00654,NA18639,NA18625,HG00533,NA18997,HG00698;num_samples_tested=3559;frequency=0.51%;num_unique_samples_tested=2562;nr_frequency=0.7%;PopulationSummary=European 0:Asian 18:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5173571	5173571	.	.	.	ID=gssv717;Name=gssv717;variant_type=CNV;variant_sub_type=Loss;outer_start=5172334;inner_start=5172406;inner_end=5173484;outer_end=5173571;inner_rank=8;num_variants=20;variants=essv5720924,essv6291611,essv9845226,essv9845227,essv9845228,essv9845229,essv9845230,essv9845231,essv9845232,essv9845233,essv9845234,essv9845235,essv9845236,essv9845237,essv9845238,essv9845239,essv9845240,essv9845241,essv9845242,essv9845243;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=18;samples=HG01794,HG01597,NA18975,HG01850,HG02379,HG02035,HG00596,HG02384,HG02408,HG02373,HG00611,NA18618,HG00654,NA18639,NA18625,HG00533,NA18997,HG00698;num_samples_tested=3559;frequency=0.51%;num_unique_samples_tested=2562;nr_frequency=0.7%;PopulationSummary=European 0:Asian 18:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5302073	5302073	.	.	.	ID=gssv725;Name=gssv725;variant_type=CNV;variant_sub_type=Loss;outer_start=5302073;inner_start=5302078;inner_end=5304591;outer_end=5304597;inner_rank=8;num_variants=14;variants=essv9845249,essv9845250,essv9845251,essv9845252,essv9845253,essv9845254,essv9845255,essv9845256,essv9845257,essv9845258,essv9845259,essv9845260,essv5642149,essv5836252;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=12;samples=NA18912,HG03212,NA19152,NA19461,HG03193,HG03115,NA19020,HG03135,NA19457,HG03464,HG03470,NA19452;num_samples_tested=3559;frequency=0.34%;num_unique_samples_tested=2562;nr_frequency=0.46%;PopulationSummary=European 0:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5302078	5304591	.	.	.	ID=gssv725;Name=gssv725;variant_type=CNV;variant_sub_type=Loss;outer_start=5302073;inner_start=5302078;inner_end=5304591;outer_end=5304597;inner_rank=8;num_variants=14;variants=essv9845249,essv9845250,essv9845251,essv9845252,essv9845253,essv9845254,essv9845255,essv9845256,essv9845257,essv9845258,essv9845259,essv9845260,essv5642149,essv5836252;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=12;samples=NA18912,HG03212,NA19152,NA19461,HG03193,HG03115,NA19020,HG03135,NA19457,HG03464,HG03470,NA19452;num_samples_tested=3559;frequency=0.34%;num_unique_samples_tested=2562;nr_frequency=0.46%;PopulationSummary=European 0:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5304597	5304597	.	.	.	ID=gssv725;Name=gssv725;variant_type=CNV;variant_sub_type=Loss;outer_start=5302073;inner_start=5302078;inner_end=5304591;outer_end=5304597;inner_rank=8;num_variants=14;variants=essv9845249,essv9845250,essv9845251,essv9845252,essv9845253,essv9845254,essv9845255,essv9845256,essv9845257,essv9845258,essv9845259,essv9845260,essv5642149,essv5836252;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=12;samples=NA18912,HG03212,NA19152,NA19461,HG03193,HG03115,NA19020,HG03135,NA19457,HG03464,HG03470,NA19452;num_samples_tested=3559;frequency=0.34%;num_unique_samples_tested=2562;nr_frequency=0.46%;PopulationSummary=European 0:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5350910	5350910	.	.	.	ID=gssv728;Name=gssv728;variant_type=CNV;variant_sub_type=Loss;outer_start=5350910;inner_start=5350910;inner_end=5351276;outer_end=5351287;inner_rank=8;num_variants=14;variants=essv9765061,essv5440076,essv5659484,essv5779798,essv5800925,essv5856400,essv5996842,essv6052126,essv6246074,essv6296706,essv6328526,essv6492274,essv6509635,essv6540368;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=14;samples=HG00280,NA12155,HG01551,NA19663,NA19703,HG00278,HG00375,NA19749,NA12892,HG00731,NA12282,sample_essv9765061,HG00160,NA20507;num_samples_tested=1822;frequency=0.77%;num_unique_samples_tested=1822;nr_frequency=0.76%;PopulationSummary=European 9:Asian 0:Mexican 2:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5350910	5351276	.	.	.	ID=gssv728;Name=gssv728;variant_type=CNV;variant_sub_type=Loss;outer_start=5350910;inner_start=5350910;inner_end=5351276;outer_end=5351287;inner_rank=8;num_variants=14;variants=essv9765061,essv5440076,essv5659484,essv5779798,essv5800925,essv5856400,essv5996842,essv6052126,essv6246074,essv6296706,essv6328526,essv6492274,essv6509635,essv6540368;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=14;samples=HG00280,NA12155,HG01551,NA19663,NA19703,HG00278,HG00375,NA19749,NA12892,HG00731,NA12282,sample_essv9765061,HG00160,NA20507;num_samples_tested=1822;frequency=0.77%;num_unique_samples_tested=1822;nr_frequency=0.76%;PopulationSummary=European 9:Asian 0:Mexican 2:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5351287	5351287	.	.	.	ID=gssv728;Name=gssv728;variant_type=CNV;variant_sub_type=Loss;outer_start=5350910;inner_start=5350910;inner_end=5351276;outer_end=5351287;inner_rank=8;num_variants=14;variants=essv9765061,essv5440076,essv5659484,essv5779798,essv5800925,essv5856400,essv5996842,essv6052126,essv6246074,essv6296706,essv6328526,essv6492274,essv6509635,essv6540368;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=14;samples=HG00280,NA12155,HG01551,NA19663,NA19703,HG00278,HG00375,NA19749,NA12892,HG00731,NA12282,sample_essv9765061,HG00160,NA20507;num_samples_tested=1822;frequency=0.77%;num_unique_samples_tested=1822;nr_frequency=0.76%;PopulationSummary=European 9:Asian 0:Mexican 2:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5359262	5359262	.	.	.	ID=gssv730;Name=gssv730;variant_type=CNV;variant_sub_type=Loss;outer_start=5359262;inner_start=5359266;inner_end=5362140;outer_end=5362142;inner_rank=8;num_variants=19;variants=essv9845261,essv9845262,essv9845263,essv9845264,essv9845265,essv9845266,essv9845267,essv9845268,essv9845269,essv9845270,essv9845271,essv9845272,essv9845273,essv9845274,essv5404073,essv5451969,essv5526874,essv5861421,essv6181377;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=14;samples=HG00638,HG02947,HG02628,HG03172,HG03130,HG02621,NA18856,HG02477,HG03027,HG03081,NA19472,HG01247,NA19451,NA19319;num_samples_tested=3559;frequency=0.39%;num_unique_samples_tested=2562;nr_frequency=0.54%;PopulationSummary=European 0:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5359266	5362140	.	.	.	ID=gssv730;Name=gssv730;variant_type=CNV;variant_sub_type=Loss;outer_start=5359262;inner_start=5359266;inner_end=5362140;outer_end=5362142;inner_rank=8;num_variants=19;variants=essv9845261,essv9845262,essv9845263,essv9845264,essv9845265,essv9845266,essv9845267,essv9845268,essv9845269,essv9845270,essv9845271,essv9845272,essv9845273,essv9845274,essv5404073,essv5451969,essv5526874,essv5861421,essv6181377;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=14;samples=HG00638,HG02947,HG02628,HG03172,HG03130,HG02621,NA18856,HG02477,HG03027,HG03081,NA19472,HG01247,NA19451,NA19319;num_samples_tested=3559;frequency=0.39%;num_unique_samples_tested=2562;nr_frequency=0.54%;PopulationSummary=European 0:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5362142	5362142	.	.	.	ID=gssv730;Name=gssv730;variant_type=CNV;variant_sub_type=Loss;outer_start=5359262;inner_start=5359266;inner_end=5362140;outer_end=5362142;inner_rank=8;num_variants=19;variants=essv9845261,essv9845262,essv9845263,essv9845264,essv9845265,essv9845266,essv9845267,essv9845268,essv9845269,essv9845270,essv9845271,essv9845272,essv9845273,essv9845274,essv5404073,essv5451969,essv5526874,essv5861421,essv6181377;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=14;samples=HG00638,HG02947,HG02628,HG03172,HG03130,HG02621,NA18856,HG02477,HG03027,HG03081,NA19472,HG01247,NA19451,NA19319;num_samples_tested=3559;frequency=0.39%;num_unique_samples_tested=2562;nr_frequency=0.54%;PopulationSummary=European 0:Asian 0:Mexican 0:African 12:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5474212	5474212	.	.	.	ID=gssv738;Name=gssv738;variant_type=CNV;variant_sub_type=Loss;outer_start=5474212;inner_start=5474221;inner_end=5474296;outer_end=5474305;inner_rank=2;num_variants=2;variants=essv9765283,essv4224996;num_studies=2;studies=Boomsma2014,Levy2007;num_platforms=2;platforms=SangerSequencing,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,AssemblyComparison;num_samples=2;samples=sample_essv9765283,HuRef;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5474221	5474296	.	.	.	ID=gssv738;Name=gssv738;variant_type=CNV;variant_sub_type=Loss;outer_start=5474212;inner_start=5474221;inner_end=5474296;outer_end=5474305;inner_rank=2;num_variants=2;variants=essv9765283,essv4224996;num_studies=2;studies=Boomsma2014,Levy2007;num_platforms=2;platforms=SangerSequencing,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,AssemblyComparison;num_samples=2;samples=sample_essv9765283,HuRef;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5474305	5474305	.	.	.	ID=gssv738;Name=gssv738;variant_type=CNV;variant_sub_type=Loss;outer_start=5474212;inner_start=5474221;inner_end=5474296;outer_end=5474305;inner_rank=2;num_variants=2;variants=essv9765283,essv4224996;num_studies=2;studies=Boomsma2014,Levy2007;num_platforms=2;platforms=SangerSequencing,Illumina_HiSeq;num_algorithms=2;algorithms=GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,AssemblyComparison;num_samples=2;samples=sample_essv9765283,HuRef;num_samples_tested=768;frequency=0.26%;num_unique_samples_tested=768;nr_frequency=0.26%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5633688	5633688	.	.	.	ID=gssv743;Name=gssv743;variant_type=CNV;variant_sub_type=Loss;outer_start=5633688;inner_start=5633688;inner_end=5633986;outer_end=5634013;inner_rank=8;num_variants=32;variants=essv9765395,essv5399348,essv5400393,essv5453155,essv5478691,essv5483457,essv5560026,essv5587877,essv5603993,essv5607342,essv5608106,essv5636736,essv5826814,essv5889786,essv5928382,essv6036715,essv6149955,essv6173891,essv6208210,essv6234181,essv6305492,essv6334378,essv6346612,essv6355678,essv6410575,essv6429604,essv6452914,essv6463945,essv6476038,essv6496995,essv6498314,essv6506229;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=32;samples=NA12828,sample_essv9765395,NA18523,HG00329,NA19818,NA18486,NA19463,NA12749,HG01440,HG00375,NA18967,NA12044,HG00524,HG00501,NA19373,NA19374,NA12813,NA18558,NA19171,NA19312,NA19625,NA11993,NA19397,NA12004,NA12750,NA18916,NA18972,NA18853,NA18975,NA18956,NA19098,NA07051;num_samples_tested=1822;frequency=1.76%;num_unique_samples_tested=1822;nr_frequency=1.75%;PopulationSummary=European 11:Asian 7:Mexican 0:African 13:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5633688	5633986	.	.	.	ID=gssv743;Name=gssv743;variant_type=CNV;variant_sub_type=Loss;outer_start=5633688;inner_start=5633688;inner_end=5633986;outer_end=5634013;inner_rank=8;num_variants=32;variants=essv9765395,essv5399348,essv5400393,essv5453155,essv5478691,essv5483457,essv5560026,essv5587877,essv5603993,essv5607342,essv5608106,essv5636736,essv5826814,essv5889786,essv5928382,essv6036715,essv6149955,essv6173891,essv6208210,essv6234181,essv6305492,essv6334378,essv6346612,essv6355678,essv6410575,essv6429604,essv6452914,essv6463945,essv6476038,essv6496995,essv6498314,essv6506229;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=32;samples=NA12828,sample_essv9765395,NA18523,HG00329,NA19818,NA18486,NA19463,NA12749,HG01440,HG00375,NA18967,NA12044,HG00524,HG00501,NA19373,NA19374,NA12813,NA18558,NA19171,NA19312,NA19625,NA11993,NA19397,NA12004,NA12750,NA18916,NA18972,NA18853,NA18975,NA18956,NA19098,NA07051;num_samples_tested=1822;frequency=1.76%;num_unique_samples_tested=1822;nr_frequency=1.75%;PopulationSummary=European 11:Asian 7:Mexican 0:African 13:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5634013	5634013	.	.	.	ID=gssv743;Name=gssv743;variant_type=CNV;variant_sub_type=Loss;outer_start=5633688;inner_start=5633688;inner_end=5633986;outer_end=5634013;inner_rank=8;num_variants=32;variants=essv9765395,essv5399348,essv5400393,essv5453155,essv5478691,essv5483457,essv5560026,essv5587877,essv5603993,essv5607342,essv5608106,essv5636736,essv5826814,essv5889786,essv5928382,essv6036715,essv6149955,essv6173891,essv6208210,essv6234181,essv6305492,essv6334378,essv6346612,essv6355678,essv6410575,essv6429604,essv6452914,essv6463945,essv6476038,essv6496995,essv6498314,essv6506229;num_studies=2;studies=1000GenomesPhase1,Boomsma2014;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=32;samples=NA12828,sample_essv9765395,NA18523,HG00329,NA19818,NA18486,NA19463,NA12749,HG01440,HG00375,NA18967,NA12044,HG00524,HG00501,NA19373,NA19374,NA12813,NA18558,NA19171,NA19312,NA19625,NA11993,NA19397,NA12004,NA12750,NA18916,NA18972,NA18853,NA18975,NA18956,NA19098,NA07051;num_samples_tested=1822;frequency=1.76%;num_unique_samples_tested=1822;nr_frequency=1.75%;PopulationSummary=European 11:Asian 7:Mexican 0:African 13:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5644646	5644646	.	.	.	ID=gssv744;Name=gssv744;variant_type=CNV;variant_sub_type=Loss;outer_start=5644646;inner_start=5644651;inner_end=5645444;outer_end=5645445;inner_rank=8;num_variants=14;variants=essv6139149,essv6161251,essv6576477,essv9845301,essv9845302,essv9845303,essv9845304,essv9845305,essv9845306,essv9845307,essv9845308,essv9845309,essv9845310,essv9845311;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=12;samples=NA19025,HG02628,NA19137,NA19984,NA19436,HG02888,NA19382,NA19380,HG01702,HG02643,HG03352,HG03558;num_samples_tested=3559;frequency=0.34%;num_unique_samples_tested=2562;nr_frequency=0.46%;PopulationSummary=European 1:Asian 0:Mexican 0:African 11:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5644651	5645444	.	.	.	ID=gssv744;Name=gssv744;variant_type=CNV;variant_sub_type=Loss;outer_start=5644646;inner_start=5644651;inner_end=5645444;outer_end=5645445;inner_rank=8;num_variants=14;variants=essv6139149,essv6161251,essv6576477,essv9845301,essv9845302,essv9845303,essv9845304,essv9845305,essv9845306,essv9845307,essv9845308,essv9845309,essv9845310,essv9845311;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=12;samples=NA19025,HG02628,NA19137,NA19984,NA19436,HG02888,NA19382,NA19380,HG01702,HG02643,HG03352,HG03558;num_samples_tested=3559;frequency=0.34%;num_unique_samples_tested=2562;nr_frequency=0.46%;PopulationSummary=European 1:Asian 0:Mexican 0:African 11:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5645445	5645445	.	.	.	ID=gssv744;Name=gssv744;variant_type=CNV;variant_sub_type=Loss;outer_start=5644646;inner_start=5644651;inner_end=5645444;outer_end=5645445;inner_rank=8;num_variants=14;variants=essv6139149,essv6161251,essv6576477,essv9845301,essv9845302,essv9845303,essv9845304,essv9845305,essv9845306,essv9845307,essv9845308,essv9845309,essv9845310,essv9845311;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=12;samples=NA19025,HG02628,NA19137,NA19984,NA19436,HG02888,NA19382,NA19380,HG01702,HG02643,HG03352,HG03558;num_samples_tested=3559;frequency=0.34%;num_unique_samples_tested=2562;nr_frequency=0.46%;PopulationSummary=European 1:Asian 0:Mexican 0:African 11:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5727693	5727693	.	.	.	ID=gssv758;Name=gssv758;variant_type=CNV;variant_sub_type=Loss;outer_start=5727693;inner_start=5727693;inner_end=5727959;outer_end=5727963;inner_rank=8;num_variants=44;variants=essv5411958,essv5418071,essv5489756,essv5499783,essv5504297,essv5549176,essv5571822,essv5574275,essv5613090,essv5665252,essv5667480,essv5692394,essv5738482,essv5768514,essv5786001,essv5790903,essv5832322,essv5850151,essv5898834,essv5927529,essv5932568,essv5935278,essv5972280,essv6020750,essv6060968,essv6108169,essv6122182,essv6129857,essv6148778,essv6190723,essv6212200,essv6213259,essv6221620,essv6294299,essv6301555,essv6310515,essv6326712,essv6356112,essv6384104,essv6384347,essv6509161,essv6565812,essv6566648,essv6863936;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=44;samples=NA18549,HG00463,NA19225,NA20317,NA19385,NA19384,NA19382,NA19380,NA20299,HG00705,HG00701,NA19463,HG00251,HG00702,NA18960,HG00448,HG00708,NA18592,HG00684,HG00427,HG00422,HG00500,NA19359,NA18636,NA18637,HG00428,HG00689,NA19374,NA18557,NA19703,NA20322,NA18945,HG00657,NA19371,HG01108,NA18917,NA18519,NA19377,HG00437,SSM089,HG00690,HG00418,HG00534,HG00698;num_samples_tested=1151;frequency=3.82%;num_unique_samples_tested=1151;nr_frequency=3.82%;PopulationSummary=European 1:Asian 26:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5727693	5727959	.	.	.	ID=gssv758;Name=gssv758;variant_type=CNV;variant_sub_type=Loss;outer_start=5727693;inner_start=5727693;inner_end=5727959;outer_end=5727963;inner_rank=8;num_variants=44;variants=essv5411958,essv5418071,essv5489756,essv5499783,essv5504297,essv5549176,essv5571822,essv5574275,essv5613090,essv5665252,essv5667480,essv5692394,essv5738482,essv5768514,essv5786001,essv5790903,essv5832322,essv5850151,essv5898834,essv5927529,essv5932568,essv5935278,essv5972280,essv6020750,essv6060968,essv6108169,essv6122182,essv6129857,essv6148778,essv6190723,essv6212200,essv6213259,essv6221620,essv6294299,essv6301555,essv6310515,essv6326712,essv6356112,essv6384104,essv6384347,essv6509161,essv6565812,essv6566648,essv6863936;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=44;samples=NA18549,HG00463,NA19225,NA20317,NA19385,NA19384,NA19382,NA19380,NA20299,HG00705,HG00701,NA19463,HG00251,HG00702,NA18960,HG00448,HG00708,NA18592,HG00684,HG00427,HG00422,HG00500,NA19359,NA18636,NA18637,HG00428,HG00689,NA19374,NA18557,NA19703,NA20322,NA18945,HG00657,NA19371,HG01108,NA18917,NA18519,NA19377,HG00437,SSM089,HG00690,HG00418,HG00534,HG00698;num_samples_tested=1151;frequency=3.82%;num_unique_samples_tested=1151;nr_frequency=3.82%;PopulationSummary=European 1:Asian 26:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5727963	5727963	.	.	.	ID=gssv758;Name=gssv758;variant_type=CNV;variant_sub_type=Loss;outer_start=5727693;inner_start=5727693;inner_end=5727959;outer_end=5727963;inner_rank=8;num_variants=44;variants=essv5411958,essv5418071,essv5489756,essv5499783,essv5504297,essv5549176,essv5571822,essv5574275,essv5613090,essv5665252,essv5667480,essv5692394,essv5738482,essv5768514,essv5786001,essv5790903,essv5832322,essv5850151,essv5898834,essv5927529,essv5932568,essv5935278,essv5972280,essv6020750,essv6060968,essv6108169,essv6122182,essv6129857,essv6148778,essv6190723,essv6212200,essv6213259,essv6221620,essv6294299,essv6301555,essv6310515,essv6326712,essv6356112,essv6384104,essv6384347,essv6509161,essv6565812,essv6566648,essv6863936;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=44;samples=NA18549,HG00463,NA19225,NA20317,NA19385,NA19384,NA19382,NA19380,NA20299,HG00705,HG00701,NA19463,HG00251,HG00702,NA18960,HG00448,HG00708,NA18592,HG00684,HG00427,HG00422,HG00500,NA19359,NA18636,NA18637,HG00428,HG00689,NA19374,NA18557,NA19703,NA20322,NA18945,HG00657,NA19371,HG01108,NA18917,NA18519,NA19377,HG00437,SSM089,HG00690,HG00418,HG00534,HG00698;num_samples_tested=1151;frequency=3.82%;num_unique_samples_tested=1151;nr_frequency=3.82%;PopulationSummary=European 1:Asian 26:Mexican 0:African 16:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5876593	5876593	.	.	.	ID=gssv781;Name=gssv781;variant_type=CNV;variant_sub_type=Loss;outer_start=5876593;inner_start=5876608;inner_end=5877445;outer_end=5877522;inner_rank=7;num_variants=4;variants=essv52791,essv59585,essv52716,nssv708951;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=sample_nssv708951,NA18508,NA18523,NA12006;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 2:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5876608	5877445	.	.	.	ID=gssv781;Name=gssv781;variant_type=CNV;variant_sub_type=Loss;outer_start=5876593;inner_start=5876608;inner_end=5877445;outer_end=5877522;inner_rank=7;num_variants=4;variants=essv52791,essv59585,essv52716,nssv708951;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=sample_nssv708951,NA18508,NA18523,NA12006;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 2:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	5877522	5877522	.	.	.	ID=gssv781;Name=gssv781;variant_type=CNV;variant_sub_type=Loss;outer_start=5876593;inner_start=5876608;inner_end=5877445;outer_end=5877522;inner_rank=7;num_variants=4;variants=essv52791,essv59585,essv52716,nssv708951;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=4;samples=sample_nssv708951,NA18508,NA18523,NA12006;num_samples_tested=1540;frequency=0.26%;num_unique_samples_tested=1540;nr_frequency=0.25%;PopulationSummary=European 2:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6064711	6064711	.	.	.	ID=gssv794;Name=gssv794;variant_type=CNV;variant_sub_type=Loss;outer_start=6064711;inner_start=6065085;inner_end=6067422;outer_end=6067640;inner_rank=9;num_variants=3;variants=nssv708989,nssv708990,essv5382298;num_studies=2;studies=McKernan2009,Cooper2011;num_platforms=2;platforms=SOLiD,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=3;samples=NA18507,sample_nssv708990,sample_nssv708989;num_samples_tested=1501;frequency=0.2%;num_unique_samples_tested=1501;nr_frequency=0.19%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065085	6067422	.	.	.	ID=gssv794;Name=gssv794;variant_type=CNV;variant_sub_type=Loss;outer_start=6064711;inner_start=6065085;inner_end=6067422;outer_end=6067640;inner_rank=9;num_variants=3;variants=nssv708989,nssv708990,essv5382298;num_studies=2;studies=McKernan2009,Cooper2011;num_platforms=2;platforms=SOLiD,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=3;samples=NA18507,sample_nssv708990,sample_nssv708989;num_samples_tested=1501;frequency=0.2%;num_unique_samples_tested=1501;nr_frequency=0.19%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6067640	6067640	.	.	.	ID=gssv794;Name=gssv794;variant_type=CNV;variant_sub_type=Loss;outer_start=6064711;inner_start=6065085;inner_end=6067422;outer_end=6067640;inner_rank=9;num_variants=3;variants=nssv708989,nssv708990,essv5382298;num_studies=2;studies=McKernan2009,Cooper2011;num_platforms=2;platforms=SOLiD,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=3;samples=NA18507,sample_nssv708990,sample_nssv708989;num_samples_tested=1501;frequency=0.2%;num_unique_samples_tested=1501;nr_frequency=0.19%;PopulationSummary=European 2:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6064750	6064750	.	.	.	ID=gssv795;Name=gssv795;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6064750;inner_start=6065070;inner_end=6066763;outer_end=6066840;inner_rank=7;num_variants=27;variants=essv36767,essv38935,essv48049,essv77191,essv56907,essv67438,essv53595,essv65930,essv83691,essv33293,essv81810,essv42870,essv77493,essv49585,essv63022,essv68019,essv73252,essv76445,nssv708972,nssv708973,nssv708974,nssv708975,nssv708976,nssv708977,nssv708978,nssv708970,nssv708971;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=27;samples=NA12828,NA11894,NA19147,NA18861,NA12156,NA18909,NA18517,sample_nssv708977,sample_nssv708976,sample_nssv708975,sample_nssv708974,sample_nssv708973,sample_nssv708972,sample_nssv708971,sample_nssv708970,NA18511,NA12287,NA19114,sample_nssv708978,NA19190,NA15510,NA11993,NA06985,NA19240,NA18858,NA12414,NA18508;num_samples_tested=1540;frequency=1.75%;num_unique_samples_tested=1540;nr_frequency=1.75%;PopulationSummary=European 16:Asian 0:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065070	6066763	.	.	.	ID=gssv795;Name=gssv795;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6064750;inner_start=6065070;inner_end=6066763;outer_end=6066840;inner_rank=7;num_variants=27;variants=essv36767,essv38935,essv48049,essv77191,essv56907,essv67438,essv53595,essv65930,essv83691,essv33293,essv81810,essv42870,essv77493,essv49585,essv63022,essv68019,essv73252,essv76445,nssv708972,nssv708973,nssv708974,nssv708975,nssv708976,nssv708977,nssv708978,nssv708970,nssv708971;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=27;samples=NA12828,NA11894,NA19147,NA18861,NA12156,NA18909,NA18517,sample_nssv708977,sample_nssv708976,sample_nssv708975,sample_nssv708974,sample_nssv708973,sample_nssv708972,sample_nssv708971,sample_nssv708970,NA18511,NA12287,NA19114,sample_nssv708978,NA19190,NA15510,NA11993,NA06985,NA19240,NA18858,NA12414,NA18508;num_samples_tested=1540;frequency=1.75%;num_unique_samples_tested=1540;nr_frequency=1.75%;PopulationSummary=European 16:Asian 0:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066840	6066840	.	.	.	ID=gssv795;Name=gssv795;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6064750;inner_start=6065070;inner_end=6066763;outer_end=6066840;inner_rank=7;num_variants=27;variants=essv36767,essv38935,essv48049,essv77191,essv56907,essv67438,essv53595,essv65930,essv83691,essv33293,essv81810,essv42870,essv77493,essv49585,essv63022,essv68019,essv73252,essv76445,nssv708972,nssv708973,nssv708974,nssv708975,nssv708976,nssv708977,nssv708978,nssv708970,nssv708971;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=27;samples=NA12828,NA11894,NA19147,NA18861,NA12156,NA18909,NA18517,sample_nssv708977,sample_nssv708976,sample_nssv708975,sample_nssv708974,sample_nssv708973,sample_nssv708972,sample_nssv708971,sample_nssv708970,NA18511,NA12287,NA19114,sample_nssv708978,NA19190,NA15510,NA11993,NA06985,NA19240,NA18858,NA12414,NA18508;num_samples_tested=1540;frequency=1.75%;num_unique_samples_tested=1540;nr_frequency=1.75%;PopulationSummary=European 16:Asian 0:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6064870	6064870	.	.	.	ID=gssv799;Name=gssv799;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6064870;inner_start=6065051;inner_end=6066141;outer_end=6066252;inner_rank=9;num_variants=6;variants=nssv708964,nssv708962,nssv708963,essv6816568,nssv708961,nssv708960;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=6;samples=sample_nssv708960,sample_nssv708961,sample_nssv708962,sample_nssv708963,sample_nssv708964,SSM078;num_samples_tested=1596;frequency=0.38%;num_unique_samples_tested=1596;nr_frequency=0.37%;PopulationSummary=European 5:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065051	6066141	.	.	.	ID=gssv799;Name=gssv799;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6064870;inner_start=6065051;inner_end=6066141;outer_end=6066252;inner_rank=9;num_variants=6;variants=nssv708964,nssv708962,nssv708963,essv6816568,nssv708961,nssv708960;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=6;samples=sample_nssv708960,sample_nssv708961,sample_nssv708962,sample_nssv708963,sample_nssv708964,SSM078;num_samples_tested=1596;frequency=0.38%;num_unique_samples_tested=1596;nr_frequency=0.37%;PopulationSummary=European 5:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066252	6066252	.	.	.	ID=gssv799;Name=gssv799;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6064870;inner_start=6065051;inner_end=6066141;outer_end=6066252;inner_rank=9;num_variants=6;variants=nssv708964,nssv708962,nssv708963,essv6816568,nssv708961,nssv708960;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=6;samples=sample_nssv708960,sample_nssv708961,sample_nssv708962,sample_nssv708963,sample_nssv708964,SSM078;num_samples_tested=1596;frequency=0.38%;num_unique_samples_tested=1596;nr_frequency=0.37%;PopulationSummary=European 5:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6064750	6064750	.	.	.	ID=gssv800;Name=gssv800;variant_type=CNV;variant_sub_type=Loss;outer_start=6064750;inner_start=6064836;inner_end=6065770;outer_end=6065887;inner_rank=7;num_variants=4;variants=essv6721991,essv6738796,essv6972308,essv52428;num_studies=2;studies=Wong2012b,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=4;samples=SSM029,SSM052,SSM045,NA12006;num_samples_tested=136;frequency=2.94%;num_unique_samples_tested=136;nr_frequency=2.94%;PopulationSummary=European 1:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6064836	6065770	.	.	.	ID=gssv800;Name=gssv800;variant_type=CNV;variant_sub_type=Loss;outer_start=6064750;inner_start=6064836;inner_end=6065770;outer_end=6065887;inner_rank=7;num_variants=4;variants=essv6721991,essv6738796,essv6972308,essv52428;num_studies=2;studies=Wong2012b,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=4;samples=SSM029,SSM052,SSM045,NA12006;num_samples_tested=136;frequency=2.94%;num_unique_samples_tested=136;nr_frequency=2.94%;PopulationSummary=European 1:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065887	6065887	.	.	.	ID=gssv800;Name=gssv800;variant_type=CNV;variant_sub_type=Loss;outer_start=6064750;inner_start=6064836;inner_end=6065770;outer_end=6065887;inner_rank=7;num_variants=4;variants=essv6721991,essv6738796,essv6972308,essv52428;num_studies=2;studies=Wong2012b,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=4;samples=SSM029,SSM052,SSM045,NA12006;num_samples_tested=136;frequency=2.94%;num_unique_samples_tested=136;nr_frequency=2.94%;PopulationSummary=European 1:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065639	6065639	.	.	.	ID=gssv801;Name=gssv801;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065639;inner_start=6065774;inner_end=6066718;outer_end=6066800;inner_rank=9;num_variants=9;variants=nssv709005,nssv626313,nssv709007,nssv709008,nssv709002,nssv709003,nssv709004,nssv709009,nssv709006;num_studies=2;studies=Arlt2010,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=9;samples=HGMDFN090,sample_nssv709008,sample_nssv709009,sample_nssv709002,sample_nssv709003,sample_nssv709004,sample_nssv709005,sample_nssv709006,sample_nssv709007;num_samples_tested=1501;frequency=0.6%;num_unique_samples_tested=1501;nr_frequency=0.59%;PopulationSummary=European 9:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065774	6066718	.	.	.	ID=gssv801;Name=gssv801;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065639;inner_start=6065774;inner_end=6066718;outer_end=6066800;inner_rank=9;num_variants=9;variants=nssv709005,nssv626313,nssv709007,nssv709008,nssv709002,nssv709003,nssv709004,nssv709009,nssv709006;num_studies=2;studies=Arlt2010,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=9;samples=HGMDFN090,sample_nssv709008,sample_nssv709009,sample_nssv709002,sample_nssv709003,sample_nssv709004,sample_nssv709005,sample_nssv709006,sample_nssv709007;num_samples_tested=1501;frequency=0.6%;num_unique_samples_tested=1501;nr_frequency=0.59%;PopulationSummary=European 9:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066800	6066800	.	.	.	ID=gssv801;Name=gssv801;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065639;inner_start=6065774;inner_end=6066718;outer_end=6066800;inner_rank=9;num_variants=9;variants=nssv709005,nssv626313,nssv709007,nssv709008,nssv709002,nssv709003,nssv709004,nssv709009,nssv709006;num_studies=2;studies=Arlt2010,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=9;samples=HGMDFN090,sample_nssv709008,sample_nssv709009,sample_nssv709002,sample_nssv709003,sample_nssv709004,sample_nssv709005,sample_nssv709006,sample_nssv709007;num_samples_tested=1501;frequency=0.6%;num_unique_samples_tested=1501;nr_frequency=0.59%;PopulationSummary=European 9:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065988	6065988	.	.	.	ID=gssv803;Name=gssv803;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065988;inner_start=6066020;inner_end=6066753;outer_end=6066933;inner_rank=7;num_variants=10;variants=essv71384,essv75161,essv40850,essv41148,essv49120,essv54570,essv64206,essv72341,essv79025,essv6714226;num_studies=2;studies=Wong2012b,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=10;samples=NA07037,NA18916,NA19225,NA12749,SSM043,NA07045,NA19099,NA18505,NA12878,NA12004;num_samples_tested=136;frequency=7.35%;num_unique_samples_tested=136;nr_frequency=7.35%;PopulationSummary=European 5:Asian 1:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066020	6066753	.	.	.	ID=gssv803;Name=gssv803;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065988;inner_start=6066020;inner_end=6066753;outer_end=6066933;inner_rank=7;num_variants=10;variants=essv71384,essv75161,essv40850,essv41148,essv49120,essv54570,essv64206,essv72341,essv79025,essv6714226;num_studies=2;studies=Wong2012b,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=10;samples=NA07037,NA18916,NA19225,NA12749,SSM043,NA07045,NA19099,NA18505,NA12878,NA12004;num_samples_tested=136;frequency=7.35%;num_unique_samples_tested=136;nr_frequency=7.35%;PopulationSummary=European 5:Asian 1:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066933	6066933	.	.	.	ID=gssv803;Name=gssv803;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065988;inner_start=6066020;inner_end=6066753;outer_end=6066933;inner_rank=7;num_variants=10;variants=essv71384,essv75161,essv40850,essv41148,essv49120,essv54570,essv64206,essv72341,essv79025,essv6714226;num_studies=2;studies=Wong2012b,Conrad2009;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=2;algorithms=PEM,GADA;num_samples=10;samples=NA07037,NA18916,NA19225,NA12749,SSM043,NA07045,NA19099,NA18505,NA12878,NA12004;num_samples_tested=136;frequency=7.35%;num_unique_samples_tested=136;nr_frequency=7.35%;PopulationSummary=European 5:Asian 1:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6072125	6072125	.	.	.	ID=gssv805;Name=gssv805;variant_type=CNV;variant_sub_type=Loss;outer_start=6072125;inner_start=6072194;inner_end=6072792;outer_end=6072956;inner_rank=8;num_variants=245;variants=essv6733471,essv5396217,essv5402443,essv5402741,essv5406403,essv5407413,essv5407886,essv5413546,essv5415000,essv5415051,essv5416587,essv5424572,essv5425976,essv5428863,essv5432446,essv5445107,essv5453827,essv5454081,essv5459906,essv5460614,essv5467304,essv5469579,essv5474452,essv5474868,essv5475755,essv5489757,essv5497657,essv5506435,essv5509769,essv5512966,essv5513983,essv5531345,essv5545770,essv5552528,essv5558169,essv5569094,essv5575680,essv5587867,essv5605963,essv5611477,essv5613898,essv5616878,essv5617025,essv5617548,essv5621908,essv5632013,essv5633336,essv5636110,essv5637574,essv5645205,essv5645214,essv5655454,essv5657029,essv5665100,essv5669584,essv5673767,essv5674310,essv5677246,essv5679535,essv5691431,essv5705359,essv5707787,essv5714136,essv5714321,essv5724721,essv5730880,essv5740671,essv5742080,essv5746389,essv5752732,essv5753506,essv5757120,essv5764384,essv5767011,essv5774618,essv5788028,essv5788966,essv5800765,essv5829542,essv5836894,essv5837146,essv5842204,essv5843395,essv5845242,essv5845916,essv5864460,essv5871453,essv5880362,essv5881206,essv5883448,essv5884490,essv5889228,essv5907730,essv5909974,essv5909976,essv5918927,essv5928633,essv5930850,essv5932588,essv5941011,essv5943253,essv5946793,essv5958284,essv5965967,essv5971083,essv5978133,essv5983105,essv5995311,essv5996087,essv5997402,essv5998533,essv6008020,essv6020546,essv6020623,essv6040350,essv6055531,essv6057781,essv6060604,essv6061149,essv6062214,essv6068361,essv6072292,essv6072530,essv6073435,essv6080909,essv6081217,essv6086953,essv6088037,essv6094817,essv6103012,essv6103095,essv6106545,essv6107623,essv6112224,essv6113253,essv6114052,essv6118327,essv6119926,essv6121818,essv6126277,essv6128759,essv6129056,essv6138404,essv6139787,essv6139989,essv6141669,essv6142865,essv6146458,essv6148472,essv6148521,essv6155134,essv6157504,essv6164111,essv6165747,essv6165749,essv6168202,essv6169655,essv6187079,essv6192880,essv6195668,essv6200679,essv6204063,essv6206244,essv6210340,essv6216628,essv6217674,essv6223863,essv6223880,essv6227383,essv6229880,essv6248870,essv6255955,essv6259723,essv6261806,essv6261835,essv6265889,essv6269635,essv6282381,essv6282855,essv6297003,essv6297659,essv6298507,essv6304897,essv6334902,essv6336381,essv6345185,essv6349389,essv6361399,essv6371370,essv6372612,essv6376345,essv6376855,essv6377173,essv6380438,essv6382629,essv6393423,essv6397243,essv6397638,essv6399264,essv6409198,essv6416025,essv6427608,essv6429236,essv6429959,essv6433245,essv6437441,essv6439716,essv6442096,essv6447871,essv6448961,essv6452048,essv6464469,essv6465287,essv6473009,essv6480699,essv6482164,essv6490716,essv6491505,essv6492760,essv6493493,essv6497354,essv6498118,essv6501200,essv6502693,essv6505577,essv6506890,essv6508076,essv6513052,essv6514803,essv6529368,essv6532235,essv6540799,essv6541060,essv6548910,essv6551773,essv6553754,essv6556052,essv6567015,essv6573525,essv6580197,essv6585620,essv6586272,essv6588591,essv6592445,essv6594356;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_GA,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=245;samples=NA19676,NA19675,HG00449,NA19779,NA19776,NA19774,HG00342,HG00375,NA19770,NA19678,NA11831,HG00620,NA20296,HG00464,HG00271,HG00704,HG00273,HG00272,HG00701,HG00274,HG00277,HG00276,NA19682,HG00278,NA19681,HG00142,NA19684,NA19685,HG00427,HG00543,NA18613,HG00428,HG00580,NA19664,HG00513,NA19660,NA19661,NA18557,NA19663,NA18559,NA19920,NA19773,HG00345,HG00344,HG00651,HG00650,HG00657,HG01383,HG00343,HG00654,HG00607,HG01518,HG01351,HG00154,NA19376,HG00260,HG00261,HG01067,HG01066,NA20356,HG01113,HG00418,HG00557,NA19651,NA19719,NA19652,NA19655,NA19654,NA19657,NA18549,HG00590,NA19712,HG00232,NA18543,NA19716,NA19717,NA19385,NA19383,HG01174,HG01171,HG01170,HG01173,NA19782,NA19780,NA19463,NA19785,HG00702,NA19789,NA19788,HG00614,NA19379,HG01070,HG01072,HG01073,HG01377,HG01079,HG00280,HG00281,HG00282,NA18530,HG00284,HG00285,NA19648,HG01354,HG01060,NA19401,HG00707,NA18534,NA19394,SSM049,NA12154,NA19404,HG00671,HG00672,HG00327,HG00326,HG00325,HG00324,HG00323,HG01353,HG00320,NA19679,HG00328,HG00479,NA18609,HG01390,HG00473,HG01048,NA18606,NA18623,HG01365,NA18621,NA18620,HG01359,NA19324,HG00708,HG01488,HG00237,HG00236,NA19818,HG00662,HG00663,HG00108,HG00334,HG00335,HG00337,HG00330,HG01350,HG00589,HG00140,HG00584,HG00338,HG00339,HG00581,HG01080,NA19725,HG00740,NA19726,NA18638,NA19720,NA19723,HG00500,NA18636,HG00463,NA19729,NA19728,NA18632,HG01051,NA19746,HG00501,NA20322,NA19749,HG00111,HG01437,HG01055,HG01108,HG00619,HG00309,HG01052,NA19436,HG00613,HG01102,NA19732,NA19731,HG00693,HG00692,HG00512,HG00690,NA18602,HG01188,HG00699,HG00698,NA19755,NA19756,NA19750,NA19758,NA19759,NA19223,HG00125,HG00124,NA12249,HG00123,HG00257,HG00443,NA19428,HG00254,HG00608,HG00252,HG00318,HG00250,HG00315,HG00313,HG00310,HG00684,HG01334,HG00525,NA20126,HG00683,HG00689,NA19190,NA19762,NA19197,HG00256,HG00138,HG00139,HG00253,HG00131,HG00136,HG00137,HG01083,HG01082,HG00246,HG00251,HG00319,HG00249,HG00533,HG00437,HG00436,HG00346,HG01366,HG00583,NA19457,HG00537,HG00534,NA19452;num_samples_tested=1151;frequency=21.29%;num_unique_samples_tested=1151;nr_frequency=21.28%;PopulationSummary=European 69:Asian 71:Mexican 47:African 23:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 35:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6072194	6072792	.	.	.	ID=gssv805;Name=gssv805;variant_type=CNV;variant_sub_type=Loss;outer_start=6072125;inner_start=6072194;inner_end=6072792;outer_end=6072956;inner_rank=8;num_variants=245;variants=essv6733471,essv5396217,essv5402443,essv5402741,essv5406403,essv5407413,essv5407886,essv5413546,essv5415000,essv5415051,essv5416587,essv5424572,essv5425976,essv5428863,essv5432446,essv5445107,essv5453827,essv5454081,essv5459906,essv5460614,essv5467304,essv5469579,essv5474452,essv5474868,essv5475755,essv5489757,essv5497657,essv5506435,essv5509769,essv5512966,essv5513983,essv5531345,essv5545770,essv5552528,essv5558169,essv5569094,essv5575680,essv5587867,essv5605963,essv5611477,essv5613898,essv5616878,essv5617025,essv5617548,essv5621908,essv5632013,essv5633336,essv5636110,essv5637574,essv5645205,essv5645214,essv5655454,essv5657029,essv5665100,essv5669584,essv5673767,essv5674310,essv5677246,essv5679535,essv5691431,essv5705359,essv5707787,essv5714136,essv5714321,essv5724721,essv5730880,essv5740671,essv5742080,essv5746389,essv5752732,essv5753506,essv5757120,essv5764384,essv5767011,essv5774618,essv5788028,essv5788966,essv5800765,essv5829542,essv5836894,essv5837146,essv5842204,essv5843395,essv5845242,essv5845916,essv5864460,essv5871453,essv5880362,essv5881206,essv5883448,essv5884490,essv5889228,essv5907730,essv5909974,essv5909976,essv5918927,essv5928633,essv5930850,essv5932588,essv5941011,essv5943253,essv5946793,essv5958284,essv5965967,essv5971083,essv5978133,essv5983105,essv5995311,essv5996087,essv5997402,essv5998533,essv6008020,essv6020546,essv6020623,essv6040350,essv6055531,essv6057781,essv6060604,essv6061149,essv6062214,essv6068361,essv6072292,essv6072530,essv6073435,essv6080909,essv6081217,essv6086953,essv6088037,essv6094817,essv6103012,essv6103095,essv6106545,essv6107623,essv6112224,essv6113253,essv6114052,essv6118327,essv6119926,essv6121818,essv6126277,essv6128759,essv6129056,essv6138404,essv6139787,essv6139989,essv6141669,essv6142865,essv6146458,essv6148472,essv6148521,essv6155134,essv6157504,essv6164111,essv6165747,essv6165749,essv6168202,essv6169655,essv6187079,essv6192880,essv6195668,essv6200679,essv6204063,essv6206244,essv6210340,essv6216628,essv6217674,essv6223863,essv6223880,essv6227383,essv6229880,essv6248870,essv6255955,essv6259723,essv6261806,essv6261835,essv6265889,essv6269635,essv6282381,essv6282855,essv6297003,essv6297659,essv6298507,essv6304897,essv6334902,essv6336381,essv6345185,essv6349389,essv6361399,essv6371370,essv6372612,essv6376345,essv6376855,essv6377173,essv6380438,essv6382629,essv6393423,essv6397243,essv6397638,essv6399264,essv6409198,essv6416025,essv6427608,essv6429236,essv6429959,essv6433245,essv6437441,essv6439716,essv6442096,essv6447871,essv6448961,essv6452048,essv6464469,essv6465287,essv6473009,essv6480699,essv6482164,essv6490716,essv6491505,essv6492760,essv6493493,essv6497354,essv6498118,essv6501200,essv6502693,essv6505577,essv6506890,essv6508076,essv6513052,essv6514803,essv6529368,essv6532235,essv6540799,essv6541060,essv6548910,essv6551773,essv6553754,essv6556052,essv6567015,essv6573525,essv6580197,essv6585620,essv6586272,essv6588591,essv6592445,essv6594356;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_GA,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=245;samples=NA19676,NA19675,HG00449,NA19779,NA19776,NA19774,HG00342,HG00375,NA19770,NA19678,NA11831,HG00620,NA20296,HG00464,HG00271,HG00704,HG00273,HG00272,HG00701,HG00274,HG00277,HG00276,NA19682,HG00278,NA19681,HG00142,NA19684,NA19685,HG00427,HG00543,NA18613,HG00428,HG00580,NA19664,HG00513,NA19660,NA19661,NA18557,NA19663,NA18559,NA19920,NA19773,HG00345,HG00344,HG00651,HG00650,HG00657,HG01383,HG00343,HG00654,HG00607,HG01518,HG01351,HG00154,NA19376,HG00260,HG00261,HG01067,HG01066,NA20356,HG01113,HG00418,HG00557,NA19651,NA19719,NA19652,NA19655,NA19654,NA19657,NA18549,HG00590,NA19712,HG00232,NA18543,NA19716,NA19717,NA19385,NA19383,HG01174,HG01171,HG01170,HG01173,NA19782,NA19780,NA19463,NA19785,HG00702,NA19789,NA19788,HG00614,NA19379,HG01070,HG01072,HG01073,HG01377,HG01079,HG00280,HG00281,HG00282,NA18530,HG00284,HG00285,NA19648,HG01354,HG01060,NA19401,HG00707,NA18534,NA19394,SSM049,NA12154,NA19404,HG00671,HG00672,HG00327,HG00326,HG00325,HG00324,HG00323,HG01353,HG00320,NA19679,HG00328,HG00479,NA18609,HG01390,HG00473,HG01048,NA18606,NA18623,HG01365,NA18621,NA18620,HG01359,NA19324,HG00708,HG01488,HG00237,HG00236,NA19818,HG00662,HG00663,HG00108,HG00334,HG00335,HG00337,HG00330,HG01350,HG00589,HG00140,HG00584,HG00338,HG00339,HG00581,HG01080,NA19725,HG00740,NA19726,NA18638,NA19720,NA19723,HG00500,NA18636,HG00463,NA19729,NA19728,NA18632,HG01051,NA19746,HG00501,NA20322,NA19749,HG00111,HG01437,HG01055,HG01108,HG00619,HG00309,HG01052,NA19436,HG00613,HG01102,NA19732,NA19731,HG00693,HG00692,HG00512,HG00690,NA18602,HG01188,HG00699,HG00698,NA19755,NA19756,NA19750,NA19758,NA19759,NA19223,HG00125,HG00124,NA12249,HG00123,HG00257,HG00443,NA19428,HG00254,HG00608,HG00252,HG00318,HG00250,HG00315,HG00313,HG00310,HG00684,HG01334,HG00525,NA20126,HG00683,HG00689,NA19190,NA19762,NA19197,HG00256,HG00138,HG00139,HG00253,HG00131,HG00136,HG00137,HG01083,HG01082,HG00246,HG00251,HG00319,HG00249,HG00533,HG00437,HG00436,HG00346,HG01366,HG00583,NA19457,HG00537,HG00534,NA19452;num_samples_tested=1151;frequency=21.29%;num_unique_samples_tested=1151;nr_frequency=21.28%;PopulationSummary=European 69:Asian 71:Mexican 47:African 23:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 35:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6072956	6072956	.	.	.	ID=gssv805;Name=gssv805;variant_type=CNV;variant_sub_type=Loss;outer_start=6072125;inner_start=6072194;inner_end=6072792;outer_end=6072956;inner_rank=8;num_variants=245;variants=essv6733471,essv5396217,essv5402443,essv5402741,essv5406403,essv5407413,essv5407886,essv5413546,essv5415000,essv5415051,essv5416587,essv5424572,essv5425976,essv5428863,essv5432446,essv5445107,essv5453827,essv5454081,essv5459906,essv5460614,essv5467304,essv5469579,essv5474452,essv5474868,essv5475755,essv5489757,essv5497657,essv5506435,essv5509769,essv5512966,essv5513983,essv5531345,essv5545770,essv5552528,essv5558169,essv5569094,essv5575680,essv5587867,essv5605963,essv5611477,essv5613898,essv5616878,essv5617025,essv5617548,essv5621908,essv5632013,essv5633336,essv5636110,essv5637574,essv5645205,essv5645214,essv5655454,essv5657029,essv5665100,essv5669584,essv5673767,essv5674310,essv5677246,essv5679535,essv5691431,essv5705359,essv5707787,essv5714136,essv5714321,essv5724721,essv5730880,essv5740671,essv5742080,essv5746389,essv5752732,essv5753506,essv5757120,essv5764384,essv5767011,essv5774618,essv5788028,essv5788966,essv5800765,essv5829542,essv5836894,essv5837146,essv5842204,essv5843395,essv5845242,essv5845916,essv5864460,essv5871453,essv5880362,essv5881206,essv5883448,essv5884490,essv5889228,essv5907730,essv5909974,essv5909976,essv5918927,essv5928633,essv5930850,essv5932588,essv5941011,essv5943253,essv5946793,essv5958284,essv5965967,essv5971083,essv5978133,essv5983105,essv5995311,essv5996087,essv5997402,essv5998533,essv6008020,essv6020546,essv6020623,essv6040350,essv6055531,essv6057781,essv6060604,essv6061149,essv6062214,essv6068361,essv6072292,essv6072530,essv6073435,essv6080909,essv6081217,essv6086953,essv6088037,essv6094817,essv6103012,essv6103095,essv6106545,essv6107623,essv6112224,essv6113253,essv6114052,essv6118327,essv6119926,essv6121818,essv6126277,essv6128759,essv6129056,essv6138404,essv6139787,essv6139989,essv6141669,essv6142865,essv6146458,essv6148472,essv6148521,essv6155134,essv6157504,essv6164111,essv6165747,essv6165749,essv6168202,essv6169655,essv6187079,essv6192880,essv6195668,essv6200679,essv6204063,essv6206244,essv6210340,essv6216628,essv6217674,essv6223863,essv6223880,essv6227383,essv6229880,essv6248870,essv6255955,essv6259723,essv6261806,essv6261835,essv6265889,essv6269635,essv6282381,essv6282855,essv6297003,essv6297659,essv6298507,essv6304897,essv6334902,essv6336381,essv6345185,essv6349389,essv6361399,essv6371370,essv6372612,essv6376345,essv6376855,essv6377173,essv6380438,essv6382629,essv6393423,essv6397243,essv6397638,essv6399264,essv6409198,essv6416025,essv6427608,essv6429236,essv6429959,essv6433245,essv6437441,essv6439716,essv6442096,essv6447871,essv6448961,essv6452048,essv6464469,essv6465287,essv6473009,essv6480699,essv6482164,essv6490716,essv6491505,essv6492760,essv6493493,essv6497354,essv6498118,essv6501200,essv6502693,essv6505577,essv6506890,essv6508076,essv6513052,essv6514803,essv6529368,essv6532235,essv6540799,essv6541060,essv6548910,essv6551773,essv6553754,essv6556052,essv6567015,essv6573525,essv6580197,essv6585620,essv6586272,essv6588591,essv6592445,essv6594356;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_GA,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=245;samples=NA19676,NA19675,HG00449,NA19779,NA19776,NA19774,HG00342,HG00375,NA19770,NA19678,NA11831,HG00620,NA20296,HG00464,HG00271,HG00704,HG00273,HG00272,HG00701,HG00274,HG00277,HG00276,NA19682,HG00278,NA19681,HG00142,NA19684,NA19685,HG00427,HG00543,NA18613,HG00428,HG00580,NA19664,HG00513,NA19660,NA19661,NA18557,NA19663,NA18559,NA19920,NA19773,HG00345,HG00344,HG00651,HG00650,HG00657,HG01383,HG00343,HG00654,HG00607,HG01518,HG01351,HG00154,NA19376,HG00260,HG00261,HG01067,HG01066,NA20356,HG01113,HG00418,HG00557,NA19651,NA19719,NA19652,NA19655,NA19654,NA19657,NA18549,HG00590,NA19712,HG00232,NA18543,NA19716,NA19717,NA19385,NA19383,HG01174,HG01171,HG01170,HG01173,NA19782,NA19780,NA19463,NA19785,HG00702,NA19789,NA19788,HG00614,NA19379,HG01070,HG01072,HG01073,HG01377,HG01079,HG00280,HG00281,HG00282,NA18530,HG00284,HG00285,NA19648,HG01354,HG01060,NA19401,HG00707,NA18534,NA19394,SSM049,NA12154,NA19404,HG00671,HG00672,HG00327,HG00326,HG00325,HG00324,HG00323,HG01353,HG00320,NA19679,HG00328,HG00479,NA18609,HG01390,HG00473,HG01048,NA18606,NA18623,HG01365,NA18621,NA18620,HG01359,NA19324,HG00708,HG01488,HG00237,HG00236,NA19818,HG00662,HG00663,HG00108,HG00334,HG00335,HG00337,HG00330,HG01350,HG00589,HG00140,HG00584,HG00338,HG00339,HG00581,HG01080,NA19725,HG00740,NA19726,NA18638,NA19720,NA19723,HG00500,NA18636,HG00463,NA19729,NA19728,NA18632,HG01051,NA19746,HG00501,NA20322,NA19749,HG00111,HG01437,HG01055,HG01108,HG00619,HG00309,HG01052,NA19436,HG00613,HG01102,NA19732,NA19731,HG00693,HG00692,HG00512,HG00690,NA18602,HG01188,HG00699,HG00698,NA19755,NA19756,NA19750,NA19758,NA19759,NA19223,HG00125,HG00124,NA12249,HG00123,HG00257,HG00443,NA19428,HG00254,HG00608,HG00252,HG00318,HG00250,HG00315,HG00313,HG00310,HG00684,HG01334,HG00525,NA20126,HG00683,HG00689,NA19190,NA19762,NA19197,HG00256,HG00138,HG00139,HG00253,HG00131,HG00136,HG00137,HG01083,HG01082,HG00246,HG00251,HG00319,HG00249,HG00533,HG00437,HG00436,HG00346,HG01366,HG00583,NA19457,HG00537,HG00534,NA19452;num_samples_tested=1151;frequency=21.29%;num_unique_samples_tested=1151;nr_frequency=21.28%;PopulationSummary=European 69:Asian 71:Mexican 47:African 23:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 35:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065930	6065930	.	.	.	ID=gssv807;Name=gssv807;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065930;inner_start=6066007;inner_end=6066600;outer_end=6066636;inner_rank=9;num_variants=127;variants=essv6773422,essv6913984,essv6769505,essv6954716,nssv709052,nssv709053,nssv709054,nssv709055,nssv709056,nssv709057,nssv709058,nssv709059,nssv709060,nssv709061,nssv709062,nssv709063,nssv709064,nssv709065,nssv709066,nssv709067,nssv709068,nssv709069,nssv709070,nssv709071,nssv709072,nssv709073,nssv709074,nssv709075,nssv709076,nssv709077,nssv709078,nssv709079,nssv709080,nssv709081,nssv709082,nssv709083,nssv709084,nssv709085,nssv709086,nssv709087,nssv709088,essv6780849,nssv709047,nssv709048,nssv709049,nssv709050,nssv709051,essv6696980,essv6793267,essv6789133,essv6824966,essv6863938,essv6853212,nssv709103,nssv709104,nssv709105,nssv709106,nssv709107,nssv709108,nssv709109,nssv709110,nssv709111,nssv709112,nssv709113,nssv709114,nssv709115,nssv709116,nssv709117,nssv709118,nssv709119,nssv709120,nssv709121,nssv709122,nssv709123,nssv709124,nssv709125,nssv709126,essv6725839,essv6895834,essv6929045,essv6679148,essv6836178,nssv709100,nssv709101,nssv709102,essv6910023,nssv709010,nssv709022,nssv709023,nssv709024,nssv709025,nssv709026,nssv709027,nssv709028,nssv709029,nssv709030,nssv709031,nssv709032,nssv709033,nssv709034,nssv709035,nssv709036,nssv709037,nssv709038,nssv709039,nssv709040,nssv709041,nssv709042,nssv709043,nssv709044,nssv709045,nssv709046,essv6839957,essv6941767,essv6666885,essv6950073,nssv709011,nssv709012,nssv709013,nssv709014,nssv709015,nssv709016,nssv709017,nssv709018,nssv709019,nssv709020,nssv709021;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=127;samples=SSM070,SSM071,sample_nssv709079,sample_nssv709078,sample_nssv709075,sample_nssv709074,sample_nssv709077,sample_nssv709076,sample_nssv709071,sample_nssv709070,sample_nssv709073,sample_nssv709072,SSM065,SSM066,SSM068,sample_nssv709101,sample_nssv709100,sample_nssv709103,sample_nssv709102,sample_nssv709105,sample_nssv709104,sample_nssv709107,sample_nssv709106,sample_nssv709109,sample_nssv709108,sample_nssv709064,sample_nssv709065,sample_nssv709062,sample_nssv709063,sample_nssv709060,sample_nssv709061,sample_nssv709053,sample_nssv709052,sample_nssv709051,sample_nssv709050,sample_nssv709057,sample_nssv709056,sample_nssv709055,sample_nssv709054,sample_nssv709059,sample_nssv709058,sample_nssv709041,sample_nssv709112,sample_nssv709113,sample_nssv709110,sample_nssv709111,sample_nssv709116,sample_nssv709117,sample_nssv709114,sample_nssv709115,sample_nssv709118,sample_nssv709119,sample_nssv709044,sample_nssv709045,sample_nssv709046,sample_nssv709047,sample_nssv709040,sample_nssv709068,sample_nssv709042,sample_nssv709043,sample_nssv709069,sample_nssv709048,sample_nssv709049,sample_nssv709066,sample_nssv709067,SSM046,sample_nssv709126,sample_nssv709125,sample_nssv709124,sample_nssv709123,sample_nssv709122,sample_nssv709121,sample_nssv709120,SSM038,SSM033,SSM030,sample_nssv709031,sample_nssv709030,sample_nssv709033,sample_nssv709032,sample_nssv709035,sample_nssv709034,sample_nssv709037,sample_nssv709036,sample_nssv709039,sample_nssv709038,SSM026,SSM020,SSM023,sample_nssv709022,sample_nssv709023,sample_nssv709020,sample_nssv709021,sample_nssv709026,sample_nssv709027,sample_nssv709024,sample_nssv709025,sample_nssv709028,sample_nssv709029,SSM004,SSM015,SSM016,sample_nssv709017,sample_nssv709016,sample_nssv709015,sample_nssv709014,sample_nssv709013,sample_nssv709012,sample_nssv709011,sample_nssv709010,SSM099,sample_nssv709019,sample_nssv709018,sample_nssv709080,sample_nssv709081,sample_nssv709082,sample_nssv709083,sample_nssv709084,sample_nssv709085,sample_nssv709086,sample_nssv709087,sample_nssv709088,SSM089,SSM087,SSM084,SSM083,SSM080;num_samples_tested=1596;frequency=7.96%;num_unique_samples_tested=1596;nr_frequency=7.95%;PopulationSummary=European 106:Asian 21:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066007	6066600	.	.	.	ID=gssv807;Name=gssv807;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065930;inner_start=6066007;inner_end=6066600;outer_end=6066636;inner_rank=9;num_variants=127;variants=essv6773422,essv6913984,essv6769505,essv6954716,nssv709052,nssv709053,nssv709054,nssv709055,nssv709056,nssv709057,nssv709058,nssv709059,nssv709060,nssv709061,nssv709062,nssv709063,nssv709064,nssv709065,nssv709066,nssv709067,nssv709068,nssv709069,nssv709070,nssv709071,nssv709072,nssv709073,nssv709074,nssv709075,nssv709076,nssv709077,nssv709078,nssv709079,nssv709080,nssv709081,nssv709082,nssv709083,nssv709084,nssv709085,nssv709086,nssv709087,nssv709088,essv6780849,nssv709047,nssv709048,nssv709049,nssv709050,nssv709051,essv6696980,essv6793267,essv6789133,essv6824966,essv6863938,essv6853212,nssv709103,nssv709104,nssv709105,nssv709106,nssv709107,nssv709108,nssv709109,nssv709110,nssv709111,nssv709112,nssv709113,nssv709114,nssv709115,nssv709116,nssv709117,nssv709118,nssv709119,nssv709120,nssv709121,nssv709122,nssv709123,nssv709124,nssv709125,nssv709126,essv6725839,essv6895834,essv6929045,essv6679148,essv6836178,nssv709100,nssv709101,nssv709102,essv6910023,nssv709010,nssv709022,nssv709023,nssv709024,nssv709025,nssv709026,nssv709027,nssv709028,nssv709029,nssv709030,nssv709031,nssv709032,nssv709033,nssv709034,nssv709035,nssv709036,nssv709037,nssv709038,nssv709039,nssv709040,nssv709041,nssv709042,nssv709043,nssv709044,nssv709045,nssv709046,essv6839957,essv6941767,essv6666885,essv6950073,nssv709011,nssv709012,nssv709013,nssv709014,nssv709015,nssv709016,nssv709017,nssv709018,nssv709019,nssv709020,nssv709021;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=127;samples=SSM070,SSM071,sample_nssv709079,sample_nssv709078,sample_nssv709075,sample_nssv709074,sample_nssv709077,sample_nssv709076,sample_nssv709071,sample_nssv709070,sample_nssv709073,sample_nssv709072,SSM065,SSM066,SSM068,sample_nssv709101,sample_nssv709100,sample_nssv709103,sample_nssv709102,sample_nssv709105,sample_nssv709104,sample_nssv709107,sample_nssv709106,sample_nssv709109,sample_nssv709108,sample_nssv709064,sample_nssv709065,sample_nssv709062,sample_nssv709063,sample_nssv709060,sample_nssv709061,sample_nssv709053,sample_nssv709052,sample_nssv709051,sample_nssv709050,sample_nssv709057,sample_nssv709056,sample_nssv709055,sample_nssv709054,sample_nssv709059,sample_nssv709058,sample_nssv709041,sample_nssv709112,sample_nssv709113,sample_nssv709110,sample_nssv709111,sample_nssv709116,sample_nssv709117,sample_nssv709114,sample_nssv709115,sample_nssv709118,sample_nssv709119,sample_nssv709044,sample_nssv709045,sample_nssv709046,sample_nssv709047,sample_nssv709040,sample_nssv709068,sample_nssv709042,sample_nssv709043,sample_nssv709069,sample_nssv709048,sample_nssv709049,sample_nssv709066,sample_nssv709067,SSM046,sample_nssv709126,sample_nssv709125,sample_nssv709124,sample_nssv709123,sample_nssv709122,sample_nssv709121,sample_nssv709120,SSM038,SSM033,SSM030,sample_nssv709031,sample_nssv709030,sample_nssv709033,sample_nssv709032,sample_nssv709035,sample_nssv709034,sample_nssv709037,sample_nssv709036,sample_nssv709039,sample_nssv709038,SSM026,SSM020,SSM023,sample_nssv709022,sample_nssv709023,sample_nssv709020,sample_nssv709021,sample_nssv709026,sample_nssv709027,sample_nssv709024,sample_nssv709025,sample_nssv709028,sample_nssv709029,SSM004,SSM015,SSM016,sample_nssv709017,sample_nssv709016,sample_nssv709015,sample_nssv709014,sample_nssv709013,sample_nssv709012,sample_nssv709011,sample_nssv709010,SSM099,sample_nssv709019,sample_nssv709018,sample_nssv709080,sample_nssv709081,sample_nssv709082,sample_nssv709083,sample_nssv709084,sample_nssv709085,sample_nssv709086,sample_nssv709087,sample_nssv709088,SSM089,SSM087,SSM084,SSM083,SSM080;num_samples_tested=1596;frequency=7.96%;num_unique_samples_tested=1596;nr_frequency=7.95%;PopulationSummary=European 106:Asian 21:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066636	6066636	.	.	.	ID=gssv807;Name=gssv807;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6065930;inner_start=6066007;inner_end=6066600;outer_end=6066636;inner_rank=9;num_variants=127;variants=essv6773422,essv6913984,essv6769505,essv6954716,nssv709052,nssv709053,nssv709054,nssv709055,nssv709056,nssv709057,nssv709058,nssv709059,nssv709060,nssv709061,nssv709062,nssv709063,nssv709064,nssv709065,nssv709066,nssv709067,nssv709068,nssv709069,nssv709070,nssv709071,nssv709072,nssv709073,nssv709074,nssv709075,nssv709076,nssv709077,nssv709078,nssv709079,nssv709080,nssv709081,nssv709082,nssv709083,nssv709084,nssv709085,nssv709086,nssv709087,nssv709088,essv6780849,nssv709047,nssv709048,nssv709049,nssv709050,nssv709051,essv6696980,essv6793267,essv6789133,essv6824966,essv6863938,essv6853212,nssv709103,nssv709104,nssv709105,nssv709106,nssv709107,nssv709108,nssv709109,nssv709110,nssv709111,nssv709112,nssv709113,nssv709114,nssv709115,nssv709116,nssv709117,nssv709118,nssv709119,nssv709120,nssv709121,nssv709122,nssv709123,nssv709124,nssv709125,nssv709126,essv6725839,essv6895834,essv6929045,essv6679148,essv6836178,nssv709100,nssv709101,nssv709102,essv6910023,nssv709010,nssv709022,nssv709023,nssv709024,nssv709025,nssv709026,nssv709027,nssv709028,nssv709029,nssv709030,nssv709031,nssv709032,nssv709033,nssv709034,nssv709035,nssv709036,nssv709037,nssv709038,nssv709039,nssv709040,nssv709041,nssv709042,nssv709043,nssv709044,nssv709045,nssv709046,essv6839957,essv6941767,essv6666885,essv6950073,nssv709011,nssv709012,nssv709013,nssv709014,nssv709015,nssv709016,nssv709017,nssv709018,nssv709019,nssv709020,nssv709021;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=127;samples=SSM070,SSM071,sample_nssv709079,sample_nssv709078,sample_nssv709075,sample_nssv709074,sample_nssv709077,sample_nssv709076,sample_nssv709071,sample_nssv709070,sample_nssv709073,sample_nssv709072,SSM065,SSM066,SSM068,sample_nssv709101,sample_nssv709100,sample_nssv709103,sample_nssv709102,sample_nssv709105,sample_nssv709104,sample_nssv709107,sample_nssv709106,sample_nssv709109,sample_nssv709108,sample_nssv709064,sample_nssv709065,sample_nssv709062,sample_nssv709063,sample_nssv709060,sample_nssv709061,sample_nssv709053,sample_nssv709052,sample_nssv709051,sample_nssv709050,sample_nssv709057,sample_nssv709056,sample_nssv709055,sample_nssv709054,sample_nssv709059,sample_nssv709058,sample_nssv709041,sample_nssv709112,sample_nssv709113,sample_nssv709110,sample_nssv709111,sample_nssv709116,sample_nssv709117,sample_nssv709114,sample_nssv709115,sample_nssv709118,sample_nssv709119,sample_nssv709044,sample_nssv709045,sample_nssv709046,sample_nssv709047,sample_nssv709040,sample_nssv709068,sample_nssv709042,sample_nssv709043,sample_nssv709069,sample_nssv709048,sample_nssv709049,sample_nssv709066,sample_nssv709067,SSM046,sample_nssv709126,sample_nssv709125,sample_nssv709124,sample_nssv709123,sample_nssv709122,sample_nssv709121,sample_nssv709120,SSM038,SSM033,SSM030,sample_nssv709031,sample_nssv709030,sample_nssv709033,sample_nssv709032,sample_nssv709035,sample_nssv709034,sample_nssv709037,sample_nssv709036,sample_nssv709039,sample_nssv709038,SSM026,SSM020,SSM023,sample_nssv709022,sample_nssv709023,sample_nssv709020,sample_nssv709021,sample_nssv709026,sample_nssv709027,sample_nssv709024,sample_nssv709025,sample_nssv709028,sample_nssv709029,SSM004,SSM015,SSM016,sample_nssv709017,sample_nssv709016,sample_nssv709015,sample_nssv709014,sample_nssv709013,sample_nssv709012,sample_nssv709011,sample_nssv709010,SSM099,sample_nssv709019,sample_nssv709018,sample_nssv709080,sample_nssv709081,sample_nssv709082,sample_nssv709083,sample_nssv709084,sample_nssv709085,sample_nssv709086,sample_nssv709087,sample_nssv709088,SSM089,SSM087,SSM084,SSM083,SSM080;num_samples_tested=1596;frequency=7.96%;num_unique_samples_tested=1596;nr_frequency=7.95%;PopulationSummary=European 106:Asian 21:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6064980	6064980	.	.	.	ID=gssv809;Name=gssv809;variant_type=CNV;variant_sub_type=Loss;outer_start=6064980;inner_start=6064980;inner_end=6065643;outer_end=6065691;inner_rank=9;num_variants=4;variants=essv6898594,nssv708957,nssv708955,nssv708956;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=4;samples=sample_nssv708955,sample_nssv708957,SSM100,sample_nssv708956;num_samples_tested=1596;frequency=0.25%;num_unique_samples_tested=1596;nr_frequency=0.25%;PopulationSummary=European 3:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6064980	6065643	.	.	.	ID=gssv809;Name=gssv809;variant_type=CNV;variant_sub_type=Loss;outer_start=6064980;inner_start=6064980;inner_end=6065643;outer_end=6065691;inner_rank=9;num_variants=4;variants=essv6898594,nssv708957,nssv708955,nssv708956;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=4;samples=sample_nssv708955,sample_nssv708957,SSM100,sample_nssv708956;num_samples_tested=1596;frequency=0.25%;num_unique_samples_tested=1596;nr_frequency=0.25%;PopulationSummary=European 3:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065691	6065691	.	.	.	ID=gssv809;Name=gssv809;variant_type=CNV;variant_sub_type=Loss;outer_start=6064980;inner_start=6064980;inner_end=6065643;outer_end=6065691;inner_rank=9;num_variants=4;variants=essv6898594,nssv708957,nssv708955,nssv708956;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=4;samples=sample_nssv708955,sample_nssv708957,SSM100,sample_nssv708956;num_samples_tested=1596;frequency=0.25%;num_unique_samples_tested=1596;nr_frequency=0.25%;PopulationSummary=European 3:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066047	6066047	.	.	.	ID=gssv812;Name=gssv812;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6066047;inner_start=6066098;inner_end=6066593;outer_end=6066636;inner_rank=9;num_variants=16;variants=essv6807360,nssv709129,nssv709130,nssv709131,nssv709132,nssv709133,nssv709134,nssv709092,nssv709093,nssv709094,nssv709095,nssv709096,nssv709097,nssv709098,nssv709099,essv6921699;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=16;samples=SSM018,sample_nssv709099,sample_nssv709098,sample_nssv709097,sample_nssv709096,sample_nssv709095,sample_nssv709094,sample_nssv709093,sample_nssv709092,SSM075,sample_nssv709130,sample_nssv709131,sample_nssv709132,sample_nssv709133,sample_nssv709134,sample_nssv709129;num_samples_tested=1596;frequency=1%;num_unique_samples_tested=1596;nr_frequency=1%;PopulationSummary=European 14:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066098	6066593	.	.	.	ID=gssv812;Name=gssv812;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6066047;inner_start=6066098;inner_end=6066593;outer_end=6066636;inner_rank=9;num_variants=16;variants=essv6807360,nssv709129,nssv709130,nssv709131,nssv709132,nssv709133,nssv709134,nssv709092,nssv709093,nssv709094,nssv709095,nssv709096,nssv709097,nssv709098,nssv709099,essv6921699;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=16;samples=SSM018,sample_nssv709099,sample_nssv709098,sample_nssv709097,sample_nssv709096,sample_nssv709095,sample_nssv709094,sample_nssv709093,sample_nssv709092,SSM075,sample_nssv709130,sample_nssv709131,sample_nssv709132,sample_nssv709133,sample_nssv709134,sample_nssv709129;num_samples_tested=1596;frequency=1%;num_unique_samples_tested=1596;nr_frequency=1%;PopulationSummary=European 14:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066636	6066636	.	.	.	ID=gssv812;Name=gssv812;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6066047;inner_start=6066098;inner_end=6066593;outer_end=6066636;inner_rank=9;num_variants=16;variants=essv6807360,nssv709129,nssv709130,nssv709131,nssv709132,nssv709133,nssv709134,nssv709092,nssv709093,nssv709094,nssv709095,nssv709096,nssv709097,nssv709098,nssv709099,essv6921699;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=16;samples=SSM018,sample_nssv709099,sample_nssv709098,sample_nssv709097,sample_nssv709096,sample_nssv709095,sample_nssv709094,sample_nssv709093,sample_nssv709092,SSM075,sample_nssv709130,sample_nssv709131,sample_nssv709132,sample_nssv709133,sample_nssv709134,sample_nssv709129;num_samples_tested=1596;frequency=1%;num_unique_samples_tested=1596;nr_frequency=1%;PopulationSummary=European 14:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065929	6065929	.	.	.	ID=gssv814;Name=gssv814;variant_type=CNV;variant_sub_type=Loss;outer_start=6065929;inner_start=6065949;inner_end=6066362;outer_end=6066419;inner_rank=9;num_variants=4;variants=essv29675,essv6843872,essv6913983,essv6797433;num_studies=2;studies=Ahn2009,Wong2012b;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=4;samples=SSM072,SJK,SSM085,SSM016;num_samples_tested=97;frequency=4.12%;num_unique_samples_tested=97;nr_frequency=4.12%;PopulationSummary=European 0:Asian 4:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065949	6066362	.	.	.	ID=gssv814;Name=gssv814;variant_type=CNV;variant_sub_type=Loss;outer_start=6065929;inner_start=6065949;inner_end=6066362;outer_end=6066419;inner_rank=9;num_variants=4;variants=essv29675,essv6843872,essv6913983,essv6797433;num_studies=2;studies=Ahn2009,Wong2012b;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=4;samples=SSM072,SJK,SSM085,SSM016;num_samples_tested=97;frequency=4.12%;num_unique_samples_tested=97;nr_frequency=4.12%;PopulationSummary=European 0:Asian 4:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066419	6066419	.	.	.	ID=gssv814;Name=gssv814;variant_type=CNV;variant_sub_type=Loss;outer_start=6065929;inner_start=6065949;inner_end=6066362;outer_end=6066419;inner_rank=9;num_variants=4;variants=essv29675,essv6843872,essv6913983,essv6797433;num_studies=2;studies=Ahn2009,Wong2012b;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=4;samples=SSM072,SJK,SSM085,SSM016;num_samples_tested=97;frequency=4.12%;num_unique_samples_tested=97;nr_frequency=4.12%;PopulationSummary=European 0:Asian 4:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6064991	6064991	.	.	.	ID=gssv817;Name=gssv817;variant_type=CNV;variant_sub_type=Loss;outer_start=6064991;inner_start=6065042;inner_end=6065394;outer_end=6065428;inner_rank=8;num_variants=4;variants=essv6733470,essv9766283,essv6843871,essv6906089;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=4;samples=sample_essv9766283,SSM049,SSM014,SSM085;num_samples_tested=863;frequency=0.46%;num_unique_samples_tested=863;nr_frequency=0.46%;PopulationSummary=European 1:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065042	6065394	.	.	.	ID=gssv817;Name=gssv817;variant_type=CNV;variant_sub_type=Loss;outer_start=6064991;inner_start=6065042;inner_end=6065394;outer_end=6065428;inner_rank=8;num_variants=4;variants=essv6733470,essv9766283,essv6843871,essv6906089;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=4;samples=sample_essv9766283,SSM049,SSM014,SSM085;num_samples_tested=863;frequency=0.46%;num_unique_samples_tested=863;nr_frequency=0.46%;PopulationSummary=European 1:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6065428	6065428	.	.	.	ID=gssv817;Name=gssv817;variant_type=CNV;variant_sub_type=Loss;outer_start=6064991;inner_start=6065042;inner_end=6065394;outer_end=6065428;inner_rank=8;num_variants=4;variants=essv6733470,essv9766283,essv6843871,essv6906089;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=4;samples=sample_essv9766283,SSM049,SSM014,SSM085;num_samples_tested=863;frequency=0.46%;num_unique_samples_tested=863;nr_frequency=0.46%;PopulationSummary=European 1:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6072194	6072194	.	.	.	ID=gssv818;Name=gssv818;variant_type=CNV;variant_sub_type=Loss;outer_start=6072194;inner_start=6072194;inner_end=6072560;outer_end=6072569;inner_rank=8;num_variants=18;variants=essv5520884,essv5528295,essv5563282,essv5588220,essv5636685,essv5695092,essv5865050,essv5877569,essv5886683,essv5922487,essv6129318,essv6188297,essv6237773,essv6255474,essv6335002,essv6501198,essv6544636,essv6703848;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=18;samples=NA18924,NA19746,NA19428,HG00284,NA19786,NA20314,HG01390,HG01133,HG01357,HG00328,HG00437,NA19379,NA19391,HG00342,HG00543,SSM040,NA19374,NA18572;num_samples_tested=1151;frequency=1.56%;num_unique_samples_tested=1151;nr_frequency=1.56%;PopulationSummary=European 3:Asian 4:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6072194	6072560	.	.	.	ID=gssv818;Name=gssv818;variant_type=CNV;variant_sub_type=Loss;outer_start=6072194;inner_start=6072194;inner_end=6072560;outer_end=6072569;inner_rank=8;num_variants=18;variants=essv5520884,essv5528295,essv5563282,essv5588220,essv5636685,essv5695092,essv5865050,essv5877569,essv5886683,essv5922487,essv6129318,essv6188297,essv6237773,essv6255474,essv6335002,essv6501198,essv6544636,essv6703848;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=18;samples=NA18924,NA19746,NA19428,HG00284,NA19786,NA20314,HG01390,HG01133,HG01357,HG00328,HG00437,NA19379,NA19391,HG00342,HG00543,SSM040,NA19374,NA18572;num_samples_tested=1151;frequency=1.56%;num_unique_samples_tested=1151;nr_frequency=1.56%;PopulationSummary=European 3:Asian 4:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6072569	6072569	.	.	.	ID=gssv818;Name=gssv818;variant_type=CNV;variant_sub_type=Loss;outer_start=6072194;inner_start=6072194;inner_end=6072560;outer_end=6072569;inner_rank=8;num_variants=18;variants=essv5520884,essv5528295,essv5563282,essv5588220,essv5636685,essv5695092,essv5865050,essv5877569,essv5886683,essv5922487,essv6129318,essv6188297,essv6237773,essv6255474,essv6335002,essv6501198,essv6544636,essv6703848;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Illumina_GA;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=18;samples=NA18924,NA19746,NA19428,HG00284,NA19786,NA20314,HG01390,HG01133,HG01357,HG00328,HG00437,NA19379,NA19391,HG00342,HG00543,SSM040,NA19374,NA18572;num_samples_tested=1151;frequency=1.56%;num_unique_samples_tested=1151;nr_frequency=1.56%;PopulationSummary=European 3:Asian 4:Mexican 2:African 6:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 3:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066454	6066454	.	.	.	ID=gssv831;Name=gssv831;variant_type=CNV;variant_sub_type=Loss;outer_start=6066454;inner_start=6066454;inner_end=6066621;outer_end=6066621;inner_rank=9;num_variants=2;variants=essv6972309,nssv709140;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=2;samples=SSM029,sample_nssv709140;num_samples_tested=1596;frequency=0.13%;num_unique_samples_tested=1596;nr_frequency=0.12%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066454	6066621	.	.	.	ID=gssv831;Name=gssv831;variant_type=CNV;variant_sub_type=Loss;outer_start=6066454;inner_start=6066454;inner_end=6066621;outer_end=6066621;inner_rank=9;num_variants=2;variants=essv6972309,nssv709140;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=2;samples=SSM029,sample_nssv709140;num_samples_tested=1596;frequency=0.13%;num_unique_samples_tested=1596;nr_frequency=0.12%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6066621	6066621	.	.	.	ID=gssv831;Name=gssv831;variant_type=CNV;variant_sub_type=Loss;outer_start=6066454;inner_start=6066454;inner_end=6066621;outer_end=6066621;inner_rank=9;num_variants=2;variants=essv6972309,nssv709140;num_studies=2;studies=Wong2012b,Cooper2011;num_platforms=2;platforms=Illumina_GA,Custom_Illumina_1.2M;num_algorithms=2;algorithms=PEM,Custom_HMM;num_samples=2;samples=SSM029,sample_nssv709140;num_samples_tested=1596;frequency=0.13%;num_unique_samples_tested=1596;nr_frequency=0.12%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6166718	6166718	.	.	.	ID=gssv841;Name=gssv841;variant_type=CNV;variant_sub_type=Gain;outer_start=6166718;inner_start=6166718;inner_end=6169303;outer_end=6169303;inner_rank=7;num_variants=2;variants=essv77725,nssv709148;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=2;samples=NA06985,sample_nssv709148;num_samples_tested=1540;frequency=0.13%;num_unique_samples_tested=1540;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6166718	6169303	.	.	.	ID=gssv841;Name=gssv841;variant_type=CNV;variant_sub_type=Gain;outer_start=6166718;inner_start=6166718;inner_end=6169303;outer_end=6169303;inner_rank=7;num_variants=2;variants=essv77725,nssv709148;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=2;samples=NA06985,sample_nssv709148;num_samples_tested=1540;frequency=0.13%;num_unique_samples_tested=1540;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6169303	6169303	.	.	.	ID=gssv841;Name=gssv841;variant_type=CNV;variant_sub_type=Gain;outer_start=6166718;inner_start=6166718;inner_end=6169303;outer_end=6169303;inner_rank=7;num_variants=2;variants=essv77725,nssv709148;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=2;samples=NA06985,sample_nssv709148;num_samples_tested=1540;frequency=0.13%;num_unique_samples_tested=1540;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6474301	6474301	.	.	.	ID=gssv870;Name=gssv870;variant_type=CNV;variant_sub_type=Loss;outer_start=6474301;inner_start=6476785;inner_end=6581602;outer_end=6592004;inner_rank=8;num_variants=3;variants=nssv11789,nssv24605,nssv3001645;num_studies=2;studies=Perry2008,Dogan2014;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=3;samples=BILGI_BIOE,NA18517,NA19173;num_samples_tested=31;frequency=9.68%;num_unique_samples_tested=31;nr_frequency=9.67%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	6476785	6581602	.	.	.	ID=gssv870;Name=gssv870;variant_type=CNV;variant_sub_type=Loss;outer_start=6474301;inner_start=6476785;inner_end=6581602;outer_end=6592004;inner_rank=8;num_variants=3;variants=nssv11789,nssv24605,nssv3001645;num_studies=2;studies=Perry2008,Dogan2014;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=3;samples=BILGI_BIOE,NA18517,NA19173;num_samples_tested=31;frequency=9.68%;num_unique_samples_tested=31;nr_frequency=9.67%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	6592004	6592004	.	.	.	ID=gssv870;Name=gssv870;variant_type=CNV;variant_sub_type=Loss;outer_start=6474301;inner_start=6476785;inner_end=6581602;outer_end=6592004;inner_rank=8;num_variants=3;variants=nssv11789,nssv24605,nssv3001645;num_studies=2;studies=Perry2008,Dogan2014;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Illumina_HiSeq;num_algorithms=2;algorithms=ReadDepth,ADM2;num_samples=3;samples=BILGI_BIOE,NA18517,NA19173;num_samples_tested=31;frequency=9.68%;num_unique_samples_tested=31;nr_frequency=9.67%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	6476628	6476628	.	.	.	ID=gssv871;Name=gssv871;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6476628;inner_start=6482187;inner_end=6518161;outer_end=6521516;inner_rank=7;num_variants=3;variants=essv71508,nssv558540,essv33694;num_studies=2;studies=Conrad2009,Schuster2010;num_platforms=2;platforms=NimbleGen42M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=KB1,NA19147,NA18916;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 0:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6482187	6518161	.	.	.	ID=gssv871;Name=gssv871;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6476628;inner_start=6482187;inner_end=6518161;outer_end=6521516;inner_rank=7;num_variants=3;variants=essv71508,nssv558540,essv33694;num_studies=2;studies=Conrad2009,Schuster2010;num_platforms=2;platforms=NimbleGen42M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=KB1,NA19147,NA18916;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 0:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6521516	6521516	.	.	.	ID=gssv871;Name=gssv871;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6476628;inner_start=6482187;inner_end=6518161;outer_end=6521516;inner_rank=7;num_variants=3;variants=essv71508,nssv558540,essv33694;num_studies=2;studies=Conrad2009,Schuster2010;num_platforms=2;platforms=NimbleGen42M,Illumina_GA+454;num_algorithms=2;algorithms=ReadDepth,GADA;num_samples=3;samples=KB1,NA19147,NA18916;num_samples_tested=41;frequency=7.32%;num_unique_samples_tested=41;nr_frequency=7.31%;PopulationSummary=European 0:Asian 0:Mexican 0:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6489926	6489926	.	.	.	ID=gssv874;Name=gssv874;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6489926;inner_start=6490545;inner_end=6520945;outer_end=6524490;inner_rank=7;num_variants=3;variants=nssv1440795,nssv1440112,essv45035;num_studies=2;studies=Park2010,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Agilent24M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=3;samples=NA18564,NA18969,NA12489;num_samples_tested=70;frequency=4.29%;num_unique_samples_tested=70;nr_frequency=4.28%;PopulationSummary=European 1:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6490545	6520945	.	.	.	ID=gssv874;Name=gssv874;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6489926;inner_start=6490545;inner_end=6520945;outer_end=6524490;inner_rank=7;num_variants=3;variants=nssv1440795,nssv1440112,essv45035;num_studies=2;studies=Park2010,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Agilent24M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=3;samples=NA18564,NA18969,NA12489;num_samples_tested=70;frequency=4.29%;num_unique_samples_tested=70;nr_frequency=4.28%;PopulationSummary=European 1:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6524490	6524490	.	.	.	ID=gssv874;Name=gssv874;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=6489926;inner_start=6490545;inner_end=6520945;outer_end=6524490;inner_rank=7;num_variants=3;variants=nssv1440795,nssv1440112,essv45035;num_studies=2;studies=Park2010,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Agilent24M;num_algorithms=2;algorithms=GADA,ADM2;num_samples=3;samples=NA18564,NA18969,NA12489;num_samples_tested=70;frequency=4.29%;num_unique_samples_tested=70;nr_frequency=4.28%;PopulationSummary=European 1:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6434463	6434463	.	.	.	ID=gssv877;Name=gssv877;variant_type=CNV;variant_sub_type=Loss;outer_start=6434463;inner_start=6434889;inner_end=6445077;outer_end=6445368;inner_rank=8;num_variants=32;variants=essv5540377,essv9845896,essv9845897,essv9845898,essv9845899,essv9845900,essv9845901,essv9845902,essv9845903,essv9845904,essv9845905,essv9845906,essv9845907,essv9845908,essv9845909,essv9845910,essv9845911,essv9845912,essv9845913,essv9845914,essv9845915,essv9845916,essv9845917,essv5423268,essv5534865,essv5878385,essv5931324,essv6037113,essv6053862,essv6282621,essv6419100,nssv709155;num_studies=3;studies=Cooper2011,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,Custom_HMM;num_samples=26;samples=HG03625,NA12342,NA19914,HG03731,HG01509,HG00371,HG00684,HG00246,NA12760,sample_nssv709155,NA18558,NA20870,HG00345,NA12044,HG00138,NA12046,HG03922,HG01140,HG00325,HG00096,HG00159,HG01344,HG03007,HG03864,NA20504,HG02681;num_samples_tested=5059;frequency=0.51%;num_unique_samples_tested=4062;nr_frequency=0.64%;PopulationSummary=European 14:Asian 8:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6434889	6445077	.	.	.	ID=gssv877;Name=gssv877;variant_type=CNV;variant_sub_type=Loss;outer_start=6434463;inner_start=6434889;inner_end=6445077;outer_end=6445368;inner_rank=8;num_variants=32;variants=essv5540377,essv9845896,essv9845897,essv9845898,essv9845899,essv9845900,essv9845901,essv9845902,essv9845903,essv9845904,essv9845905,essv9845906,essv9845907,essv9845908,essv9845909,essv9845910,essv9845911,essv9845912,essv9845913,essv9845914,essv9845915,essv9845916,essv9845917,essv5423268,essv5534865,essv5878385,essv5931324,essv6037113,essv6053862,essv6282621,essv6419100,nssv709155;num_studies=3;studies=Cooper2011,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,Custom_HMM;num_samples=26;samples=HG03625,NA12342,NA19914,HG03731,HG01509,HG00371,HG00684,HG00246,NA12760,sample_nssv709155,NA18558,NA20870,HG00345,NA12044,HG00138,NA12046,HG03922,HG01140,HG00325,HG00096,HG00159,HG01344,HG03007,HG03864,NA20504,HG02681;num_samples_tested=5059;frequency=0.51%;num_unique_samples_tested=4062;nr_frequency=0.64%;PopulationSummary=European 14:Asian 8:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6445368	6445368	.	.	.	ID=gssv877;Name=gssv877;variant_type=CNV;variant_sub_type=Loss;outer_start=6434463;inner_start=6434889;inner_end=6445077;outer_end=6445368;inner_rank=8;num_variants=32;variants=essv5540377,essv9845896,essv9845897,essv9845898,essv9845899,essv9845900,essv9845901,essv9845902,essv9845903,essv9845904,essv9845905,essv9845906,essv9845907,essv9845908,essv9845909,essv9845910,essv9845911,essv9845912,essv9845913,essv9845914,essv9845915,essv9845916,essv9845917,essv5423268,essv5534865,essv5878385,essv5931324,essv6037113,essv6053862,essv6282621,essv6419100,nssv709155;num_studies=3;studies=Cooper2011,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,Custom_HMM;num_samples=26;samples=HG03625,NA12342,NA19914,HG03731,HG01509,HG00371,HG00684,HG00246,NA12760,sample_nssv709155,NA18558,NA20870,HG00345,NA12044,HG00138,NA12046,HG03922,HG01140,HG00325,HG00096,HG00159,HG01344,HG03007,HG03864,NA20504,HG02681;num_samples_tested=5059;frequency=0.51%;num_unique_samples_tested=4062;nr_frequency=0.64%;PopulationSummary=European 14:Asian 8:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6437890	6437890	.	.	.	ID=gssv879;Name=gssv879;variant_type=CNV;variant_sub_type=Loss;outer_start=6437890;inner_start=6438157;inner_end=6445897;outer_end=6446000;inner_rank=7;num_variants=75;variants=essv9738536,essv9845919,essv9845920,essv9845921,essv9845922,essv9845923,essv9845924,essv9845925,essv9845926,essv9845927,essv9845928,essv9845929,essv9845930,essv9845931,essv9845932,essv9845933,essv9845934,essv9845935,essv9845936,essv9845937,essv9845938,essv9845939,essv9845940,essv9845941,essv9845942,essv9845943,essv9845944,essv9845945,essv9845946,essv9845947,essv9845948,essv5499015,essv5574356,essv5579207,essv5621209,essv5712074,essv5746308,essv5814488,essv6038179,essv6083095,essv6110969,essv6180877,essv6270116,essv6323711,essv69102,nssv709166,nssv709167,nssv709168,nssv709169,nssv709170,nssv709171,nssv709172,nssv709173,nssv709174,nssv709175,nssv709176,nssv709177,nssv709178,nssv709179,nssv709180,nssv709181,nssv709182,nssv709183,nssv709184,nssv709185,nssv709186,nssv709161,nssv709162,nssv709163,nssv709164,nssv709165,nssv709160,nssv709157,nssv709158,nssv709159;num_studies=5;studies=1000GenomesPhase1,Cooper2011,Conrad2009,Boomsma2014,1000GenomesPhase3;num_platforms=5;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=5;algorithms=Custom_HMM,PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA;num_samples=61;samples=sample_nssv709174,sample_nssv709175,sample_nssv709176,sample_nssv709177,sample_nssv709170,sample_essv9738536,sample_nssv709172,sample_nssv709173,NA19914,sample_nssv709178,sample_nssv709179,HG02660,sample_nssv709160,NA12342,HG03625,HG00126,sample_nssv709171,HG03731,HG01509,HG00371,NA12872,sample_nssv709158,sample_nssv709180,NA12760,sample_nssv709157,HG00176,sample_nssv709183,sample_nssv709184,sample_nssv709163,sample_nssv709162,sample_nssv709161,sample_nssv709182,sample_nssv709167,sample_nssv709166,sample_nssv709165,sample_nssv709164,sample_nssv709181,NA18558,sample_nssv709169,sample_nssv709168,sample_nssv709185,HG00325,NA20870,HG00345,NA12044,HG00138,NA12046,HG03922,sample_nssv709186,HG01140,HG00246,HG00096,HG00159,HG01344,HG03007,HG01516,NA20504,sample_nssv709159,HG03967,HG03864,HG02681;num_samples_tested=5866;frequency=1.04%;num_unique_samples_tested=4832;nr_frequency=1.26%;PopulationSummary=European 48:Asian 9:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6438157	6445897	.	.	.	ID=gssv879;Name=gssv879;variant_type=CNV;variant_sub_type=Loss;outer_start=6437890;inner_start=6438157;inner_end=6445897;outer_end=6446000;inner_rank=7;num_variants=75;variants=essv9738536,essv9845919,essv9845920,essv9845921,essv9845922,essv9845923,essv9845924,essv9845925,essv9845926,essv9845927,essv9845928,essv9845929,essv9845930,essv9845931,essv9845932,essv9845933,essv9845934,essv9845935,essv9845936,essv9845937,essv9845938,essv9845939,essv9845940,essv9845941,essv9845942,essv9845943,essv9845944,essv9845945,essv9845946,essv9845947,essv9845948,essv5499015,essv5574356,essv5579207,essv5621209,essv5712074,essv5746308,essv5814488,essv6038179,essv6083095,essv6110969,essv6180877,essv6270116,essv6323711,essv69102,nssv709166,nssv709167,nssv709168,nssv709169,nssv709170,nssv709171,nssv709172,nssv709173,nssv709174,nssv709175,nssv709176,nssv709177,nssv709178,nssv709179,nssv709180,nssv709181,nssv709182,nssv709183,nssv709184,nssv709185,nssv709186,nssv709161,nssv709162,nssv709163,nssv709164,nssv709165,nssv709160,nssv709157,nssv709158,nssv709159;num_studies=5;studies=1000GenomesPhase1,Cooper2011,Conrad2009,Boomsma2014,1000GenomesPhase3;num_platforms=5;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=5;algorithms=Custom_HMM,PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA;num_samples=61;samples=sample_nssv709174,sample_nssv709175,sample_nssv709176,sample_nssv709177,sample_nssv709170,sample_essv9738536,sample_nssv709172,sample_nssv709173,NA19914,sample_nssv709178,sample_nssv709179,HG02660,sample_nssv709160,NA12342,HG03625,HG00126,sample_nssv709171,HG03731,HG01509,HG00371,NA12872,sample_nssv709158,sample_nssv709180,NA12760,sample_nssv709157,HG00176,sample_nssv709183,sample_nssv709184,sample_nssv709163,sample_nssv709162,sample_nssv709161,sample_nssv709182,sample_nssv709167,sample_nssv709166,sample_nssv709165,sample_nssv709164,sample_nssv709181,NA18558,sample_nssv709169,sample_nssv709168,sample_nssv709185,HG00325,NA20870,HG00345,NA12044,HG00138,NA12046,HG03922,sample_nssv709186,HG01140,HG00246,HG00096,HG00159,HG01344,HG03007,HG01516,NA20504,sample_nssv709159,HG03967,HG03864,HG02681;num_samples_tested=5866;frequency=1.04%;num_unique_samples_tested=4832;nr_frequency=1.26%;PopulationSummary=European 48:Asian 9:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6446000	6446000	.	.	.	ID=gssv879;Name=gssv879;variant_type=CNV;variant_sub_type=Loss;outer_start=6437890;inner_start=6438157;inner_end=6445897;outer_end=6446000;inner_rank=7;num_variants=75;variants=essv9738536,essv9845919,essv9845920,essv9845921,essv9845922,essv9845923,essv9845924,essv9845925,essv9845926,essv9845927,essv9845928,essv9845929,essv9845930,essv9845931,essv9845932,essv9845933,essv9845934,essv9845935,essv9845936,essv9845937,essv9845938,essv9845939,essv9845940,essv9845941,essv9845942,essv9845943,essv9845944,essv9845945,essv9845946,essv9845947,essv9845948,essv5499015,essv5574356,essv5579207,essv5621209,essv5712074,essv5746308,essv5814488,essv6038179,essv6083095,essv6110969,essv6180877,essv6270116,essv6323711,essv69102,nssv709166,nssv709167,nssv709168,nssv709169,nssv709170,nssv709171,nssv709172,nssv709173,nssv709174,nssv709175,nssv709176,nssv709177,nssv709178,nssv709179,nssv709180,nssv709181,nssv709182,nssv709183,nssv709184,nssv709185,nssv709186,nssv709161,nssv709162,nssv709163,nssv709164,nssv709165,nssv709160,nssv709157,nssv709158,nssv709159;num_studies=5;studies=1000GenomesPhase1,Cooper2011,Conrad2009,Boomsma2014,1000GenomesPhase3;num_platforms=5;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Custom_Illumina_1.2M,Multiple_NGS_Sequencing,Illumina_HiSeq;num_algorithms=5;algorithms=Custom_HMM,PEM+ReadDepth+SplitRead,RD+PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA;num_samples=61;samples=sample_nssv709174,sample_nssv709175,sample_nssv709176,sample_nssv709177,sample_nssv709170,sample_essv9738536,sample_nssv709172,sample_nssv709173,NA19914,sample_nssv709178,sample_nssv709179,HG02660,sample_nssv709160,NA12342,HG03625,HG00126,sample_nssv709171,HG03731,HG01509,HG00371,NA12872,sample_nssv709158,sample_nssv709180,NA12760,sample_nssv709157,HG00176,sample_nssv709183,sample_nssv709184,sample_nssv709163,sample_nssv709162,sample_nssv709161,sample_nssv709182,sample_nssv709167,sample_nssv709166,sample_nssv709165,sample_nssv709164,sample_nssv709181,NA18558,sample_nssv709169,sample_nssv709168,sample_nssv709185,HG00325,NA20870,HG00345,NA12044,HG00138,NA12046,HG03922,sample_nssv709186,HG01140,HG00246,HG00096,HG00159,HG01344,HG03007,HG01516,NA20504,sample_nssv709159,HG03967,HG03864,HG02681;num_samples_tested=5866;frequency=1.04%;num_unique_samples_tested=4832;nr_frequency=1.26%;PopulationSummary=European 48:Asian 9:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 1:NorthAmerican 0:SouthAmerican 2:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6458634	6458634	.	.	.	ID=gssv887;Name=gssv887;variant_type=CNV;variant_sub_type=Loss;outer_start=6458634;inner_start=6458638;inner_end=6459609;outer_end=6459611;inner_rank=7;num_variants=91;variants=essv9845949,essv9845950,essv9845951,essv9845952,essv9845953,essv9845954,essv9845955,essv9845956,essv9845957,essv9845958,essv9845959,essv9845960,essv9845961,essv9845962,essv9845963,essv9845964,essv9845965,essv9845966,essv9845967,essv9845968,essv9845969,essv9845970,essv9845971,essv9845972,essv9845973,essv9845974,essv9845975,essv9845976,essv9845977,essv9845978,essv9845979,essv9845980,essv9845981,essv9845982,essv9845983,essv9845984,essv9845985,essv9845986,essv9845987,essv9845988,essv9845989,essv9845990,essv9845991,essv9845992,essv9845993,essv9845994,essv9845995,essv9845996,essv9845997,essv9845998,essv9845999,essv9846000,essv9846001,essv9846002,essv9846003,essv9846004,essv9846005,essv9846006,essv9846007,essv9846008,essv9846009,essv9846010,essv9846011,essv9846012,essv9846013,essv9846014,essv9846015,essv9846016,essv9846017,essv9846018,essv9846019,essv9846020,essv9846021,essv9846022,essv9846023,essv9846024,essv9846025,essv9846026,essv9846027,essv9846028,essv9846029,essv5461566,essv5518920,essv5544144,essv5547221,essv5695343,essv5761716,essv6014139,essv6395166,essv49497,essv60302;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=81;samples=NA19328,HG03258,HG03212,HG03198,NA19036,NA19320,NA18523,HG02143,NA19095,HG02557,NA19384,HG03111,HG03517,HG02464,HG02757,HG02678,HG03048,HG03351,NA19319,NA19042,HG02449,NA19428,HG03057,NA19247,NA19351,NA18498,HG03058,HG02445,HG03352,NA19131,HG00743,HG01312,NA19332,NA19449,NA19137,HG02879,NA19113,NA20348,NA19024,NA19334,NA19664,NA19466,HG01989,NA19239,HG03046,NA19210,HG01986,NA19331,NA19214,HG03572,HG03479,HG01896,HG02508,HG02334,HG02887,HG03470,HG02053,HG02052,HG02502,NA20362,HG02944,NA19472,HG02629,HG02583,HG02582,HG02981,NA18489,NA18853,HG03515,HG02419,HG02317,NA19818,NA20276,NA19200,NA18505,HG03559,NA18517,NA19461,NA19475,NA19107,HG02768;num_samples_tested=3599;frequency=2.25%;num_unique_samples_tested=2565;nr_frequency=3.15%;PopulationSummary=European 0:Asian 0:Mexican 1:African 78:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 2:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6458638	6459609	.	.	.	ID=gssv887;Name=gssv887;variant_type=CNV;variant_sub_type=Loss;outer_start=6458634;inner_start=6458638;inner_end=6459609;outer_end=6459611;inner_rank=7;num_variants=91;variants=essv9845949,essv9845950,essv9845951,essv9845952,essv9845953,essv9845954,essv9845955,essv9845956,essv9845957,essv9845958,essv9845959,essv9845960,essv9845961,essv9845962,essv9845963,essv9845964,essv9845965,essv9845966,essv9845967,essv9845968,essv9845969,essv9845970,essv9845971,essv9845972,essv9845973,essv9845974,essv9845975,essv9845976,essv9845977,essv9845978,essv9845979,essv9845980,essv9845981,essv9845982,essv9845983,essv9845984,essv9845985,essv9845986,essv9845987,essv9845988,essv9845989,essv9845990,essv9845991,essv9845992,essv9845993,essv9845994,essv9845995,essv9845996,essv9845997,essv9845998,essv9845999,essv9846000,essv9846001,essv9846002,essv9846003,essv9846004,essv9846005,essv9846006,essv9846007,essv9846008,essv9846009,essv9846010,essv9846011,essv9846012,essv9846013,essv9846014,essv9846015,essv9846016,essv9846017,essv9846018,essv9846019,essv9846020,essv9846021,essv9846022,essv9846023,essv9846024,essv9846025,essv9846026,essv9846027,essv9846028,essv9846029,essv5461566,essv5518920,essv5544144,essv5547221,essv5695343,essv5761716,essv6014139,essv6395166,essv49497,essv60302;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=81;samples=NA19328,HG03258,HG03212,HG03198,NA19036,NA19320,NA18523,HG02143,NA19095,HG02557,NA19384,HG03111,HG03517,HG02464,HG02757,HG02678,HG03048,HG03351,NA19319,NA19042,HG02449,NA19428,HG03057,NA19247,NA19351,NA18498,HG03058,HG02445,HG03352,NA19131,HG00743,HG01312,NA19332,NA19449,NA19137,HG02879,NA19113,NA20348,NA19024,NA19334,NA19664,NA19466,HG01989,NA19239,HG03046,NA19210,HG01986,NA19331,NA19214,HG03572,HG03479,HG01896,HG02508,HG02334,HG02887,HG03470,HG02053,HG02052,HG02502,NA20362,HG02944,NA19472,HG02629,HG02583,HG02582,HG02981,NA18489,NA18853,HG03515,HG02419,HG02317,NA19818,NA20276,NA19200,NA18505,HG03559,NA18517,NA19461,NA19475,NA19107,HG02768;num_samples_tested=3599;frequency=2.25%;num_unique_samples_tested=2565;nr_frequency=3.15%;PopulationSummary=European 0:Asian 0:Mexican 1:African 78:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 2:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6459611	6459611	.	.	.	ID=gssv887;Name=gssv887;variant_type=CNV;variant_sub_type=Loss;outer_start=6458634;inner_start=6458638;inner_end=6459609;outer_end=6459611;inner_rank=7;num_variants=91;variants=essv9845949,essv9845950,essv9845951,essv9845952,essv9845953,essv9845954,essv9845955,essv9845956,essv9845957,essv9845958,essv9845959,essv9845960,essv9845961,essv9845962,essv9845963,essv9845964,essv9845965,essv9845966,essv9845967,essv9845968,essv9845969,essv9845970,essv9845971,essv9845972,essv9845973,essv9845974,essv9845975,essv9845976,essv9845977,essv9845978,essv9845979,essv9845980,essv9845981,essv9845982,essv9845983,essv9845984,essv9845985,essv9845986,essv9845987,essv9845988,essv9845989,essv9845990,essv9845991,essv9845992,essv9845993,essv9845994,essv9845995,essv9845996,essv9845997,essv9845998,essv9845999,essv9846000,essv9846001,essv9846002,essv9846003,essv9846004,essv9846005,essv9846006,essv9846007,essv9846008,essv9846009,essv9846010,essv9846011,essv9846012,essv9846013,essv9846014,essv9846015,essv9846016,essv9846017,essv9846018,essv9846019,essv9846020,essv9846021,essv9846022,essv9846023,essv9846024,essv9846025,essv9846026,essv9846027,essv9846028,essv9846029,essv5461566,essv5518920,essv5544144,essv5547221,essv5695343,essv5761716,essv6014139,essv6395166,essv49497,essv60302;num_studies=3;studies=Conrad2009,1000GenomesPhase1,1000GenomesPhase3;num_platforms=3;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=3;algorithms=PEM+ReadDepth+SplitRead,RD+PEM,GADA;num_samples=81;samples=NA19328,HG03258,HG03212,HG03198,NA19036,NA19320,NA18523,HG02143,NA19095,HG02557,NA19384,HG03111,HG03517,HG02464,HG02757,HG02678,HG03048,HG03351,NA19319,NA19042,HG02449,NA19428,HG03057,NA19247,NA19351,NA18498,HG03058,HG02445,HG03352,NA19131,HG00743,HG01312,NA19332,NA19449,NA19137,HG02879,NA19113,NA20348,NA19024,NA19334,NA19664,NA19466,HG01989,NA19239,HG03046,NA19210,HG01986,NA19331,NA19214,HG03572,HG03479,HG01896,HG02508,HG02334,HG02887,HG03470,HG02053,HG02052,HG02502,NA20362,HG02944,NA19472,HG02629,HG02583,HG02582,HG02981,NA18489,NA18853,HG03515,HG02419,HG02317,NA19818,NA20276,NA19200,NA18505,HG03559,NA18517,NA19461,NA19475,NA19107,HG02768;num_samples_tested=3599;frequency=2.25%;num_unique_samples_tested=2565;nr_frequency=3.15%;PopulationSummary=European 0:Asian 0:Mexican 1:African 78:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 2:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6858542	6858542	.	.	.	ID=gssv902;Name=gssv902;variant_type=CNV;variant_sub_type=Loss;outer_start=6858542;inner_start=6858547;inner_end=6858914;outer_end=6858971;inner_rank=9;num_variants=2;variants=essv4873252,essv6800487;num_studies=2;studies=Bentley2008,Wong2012b;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=NA18507,SSM002;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6858547	6858914	.	.	.	ID=gssv902;Name=gssv902;variant_type=CNV;variant_sub_type=Loss;outer_start=6858542;inner_start=6858547;inner_end=6858914;outer_end=6858971;inner_rank=9;num_variants=2;variants=essv4873252,essv6800487;num_studies=2;studies=Bentley2008,Wong2012b;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=NA18507,SSM002;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6858971	6858971	.	.	.	ID=gssv902;Name=gssv902;variant_type=CNV;variant_sub_type=Loss;outer_start=6858542;inner_start=6858547;inner_end=6858914;outer_end=6858971;inner_rank=9;num_variants=2;variants=essv4873252,essv6800487;num_studies=2;studies=Bentley2008,Wong2012b;num_platforms=1;platforms=Illumina_GA;num_algorithms=1;algorithms=PEM;num_samples=2;samples=NA18507,SSM002;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 0:Asian 1:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6858581	6858581	.	.	.	ID=gssv903;Name=gssv903;variant_type=CNV;variant_sub_type=Loss;outer_start=6858581;inner_start=6858611;inner_end=6858855;outer_end=6858878;inner_rank=8;num_variants=32;variants=essv6714228,essv6921701,essv6784979,essv6721993,essv6954719,essv6910026,essv6925675,essv6804392,essv6902516,essv6710566,essv6707251,essv9739091,essv6916551,essv6821165,essv6801609,essv6807361,essv6689250,essv6793269,essv6797435,essv6813159,essv6718152,essv6880412,essv6972312,essv6703849,essv6946478,essv6895835,essv6766528,essv6780852,essv6836179,essv6871703,essv6853214,essv6863940;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=32;samples=SSM072,SSM073,SSM071,SSM077,SSM074,SSM075,SSM079,SSM018,SSM019,SSM036,SSM013,SSM015,SSM091,SSM094,SSM099,SSM089,SSM068,SSM043,SSM003,SSM064,SSM069,SSM042,SSM041,SSM040,SSM045,SSM044,SSM029,SSM024,SSM026,sample_essv9739091,SSM087,SSM083;num_samples_tested=863;frequency=3.71%;num_unique_samples_tested=863;nr_frequency=3.7%;PopulationSummary=European 1:Asian 31:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6858611	6858855	.	.	.	ID=gssv903;Name=gssv903;variant_type=CNV;variant_sub_type=Loss;outer_start=6858581;inner_start=6858611;inner_end=6858855;outer_end=6858878;inner_rank=8;num_variants=32;variants=essv6714228,essv6921701,essv6784979,essv6721993,essv6954719,essv6910026,essv6925675,essv6804392,essv6902516,essv6710566,essv6707251,essv9739091,essv6916551,essv6821165,essv6801609,essv6807361,essv6689250,essv6793269,essv6797435,essv6813159,essv6718152,essv6880412,essv6972312,essv6703849,essv6946478,essv6895835,essv6766528,essv6780852,essv6836179,essv6871703,essv6853214,essv6863940;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=32;samples=SSM072,SSM073,SSM071,SSM077,SSM074,SSM075,SSM079,SSM018,SSM019,SSM036,SSM013,SSM015,SSM091,SSM094,SSM099,SSM089,SSM068,SSM043,SSM003,SSM064,SSM069,SSM042,SSM041,SSM040,SSM045,SSM044,SSM029,SSM024,SSM026,sample_essv9739091,SSM087,SSM083;num_samples_tested=863;frequency=3.71%;num_unique_samples_tested=863;nr_frequency=3.7%;PopulationSummary=European 1:Asian 31:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6858878	6858878	.	.	.	ID=gssv903;Name=gssv903;variant_type=CNV;variant_sub_type=Loss;outer_start=6858581;inner_start=6858611;inner_end=6858855;outer_end=6858878;inner_rank=8;num_variants=32;variants=essv6714228,essv6921701,essv6784979,essv6721993,essv6954719,essv6910026,essv6925675,essv6804392,essv6902516,essv6710566,essv6707251,essv9739091,essv6916551,essv6821165,essv6801609,essv6807361,essv6689250,essv6793269,essv6797435,essv6813159,essv6718152,essv6880412,essv6972312,essv6703849,essv6946478,essv6895835,essv6766528,essv6780852,essv6836179,essv6871703,essv6853214,essv6863940;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=32;samples=SSM072,SSM073,SSM071,SSM077,SSM074,SSM075,SSM079,SSM018,SSM019,SSM036,SSM013,SSM015,SSM091,SSM094,SSM099,SSM089,SSM068,SSM043,SSM003,SSM064,SSM069,SSM042,SSM041,SSM040,SSM045,SSM044,SSM029,SSM024,SSM026,sample_essv9739091,SSM087,SSM083;num_samples_tested=863;frequency=3.71%;num_unique_samples_tested=863;nr_frequency=3.7%;PopulationSummary=European 1:Asian 31:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6858651	6858651	.	.	.	ID=gssv904;Name=gssv904;variant_type=CNV;variant_sub_type=Loss;outer_start=6858651;inner_start=6858652;inner_end=6858831;outer_end=6858831;inner_rank=2;num_variants=2;variants=essv3780745,nssv3000445;num_studies=2;studies=Dogan2014,Levy2007;num_platforms=2;platforms=Illumina_HiSeq,SangerSequencing;num_algorithms=2;algorithms=PEM,AssemblyComparison;num_samples=2;samples=BILGI_BIOE,HuRef;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	6858652	6858831	.	.	.	ID=gssv904;Name=gssv904;variant_type=CNV;variant_sub_type=Loss;outer_start=6858651;inner_start=6858652;inner_end=6858831;outer_end=6858831;inner_rank=2;num_variants=2;variants=essv3780745,nssv3000445;num_studies=2;studies=Dogan2014,Levy2007;num_platforms=2;platforms=Illumina_HiSeq,SangerSequencing;num_algorithms=2;algorithms=PEM,AssemblyComparison;num_samples=2;samples=BILGI_BIOE,HuRef;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	6858831	6858831	.	.	.	ID=gssv904;Name=gssv904;variant_type=CNV;variant_sub_type=Loss;outer_start=6858651;inner_start=6858652;inner_end=6858831;outer_end=6858831;inner_rank=2;num_variants=2;variants=essv3780745,nssv3000445;num_studies=2;studies=Dogan2014,Levy2007;num_platforms=2;platforms=Illumina_HiSeq,SangerSequencing;num_algorithms=2;algorithms=PEM,AssemblyComparison;num_samples=2;samples=BILGI_BIOE,HuRef;num_samples_tested=2;frequency=100%;num_unique_samples_tested=2;nr_frequency=100%;PopulationSummary=European 1:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	6861163	6861163	.	.	.	ID=gssv905;Name=gssv905;variant_type=CNV;variant_sub_type=Loss;outer_start=6861163;inner_start=6861223;inner_end=6861853;outer_end=6861918;inner_rank=7;num_variants=3;variants=essv9846130,essv9846131,essv43903;num_studies=2;studies=Conrad2009,1000GenomesPhase3;num_platforms=2;platforms=NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,GADA;num_samples=2;samples=NA19916,NA18909;num_samples_tested=2544;frequency=0.08%;num_unique_samples_tested=2509;nr_frequency=0.07%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6861223	6861853	.	.	.	ID=gssv905;Name=gssv905;variant_type=CNV;variant_sub_type=Loss;outer_start=6861163;inner_start=6861223;inner_end=6861853;outer_end=6861918;inner_rank=7;num_variants=3;variants=essv9846130,essv9846131,essv43903;num_studies=2;studies=Conrad2009,1000GenomesPhase3;num_platforms=2;platforms=NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,GADA;num_samples=2;samples=NA19916,NA18909;num_samples_tested=2544;frequency=0.08%;num_unique_samples_tested=2509;nr_frequency=0.07%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	6861918	6861918	.	.	.	ID=gssv905;Name=gssv905;variant_type=CNV;variant_sub_type=Loss;outer_start=6861163;inner_start=6861223;inner_end=6861853;outer_end=6861918;inner_rank=7;num_variants=3;variants=essv9846130,essv9846131,essv43903;num_studies=2;studies=Conrad2009,1000GenomesPhase3;num_platforms=2;platforms=NimbleGen42M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,GADA;num_samples=2;samples=NA19916,NA18909;num_samples_tested=2544;frequency=0.08%;num_unique_samples_tested=2509;nr_frequency=0.07%;PopulationSummary=European 0:Asian 0:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7022668	7022668	.	.	.	ID=gssv911;Name=gssv911;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7022668;inner_start=7022698;inner_end=7023493;outer_end=7023494;inner_rank=7;num_variants=202;variants=nssv709346,nssv709347,nssv709348,nssv709349,nssv709350,nssv709351,nssv709352,nssv709353,nssv709354,nssv709355,nssv709356,nssv709357,nssv709358,nssv709359,nssv709360,nssv709361,nssv709362,nssv709363,nssv709364,nssv709365,nssv709366,nssv709367,nssv709368,nssv709369,nssv709370,nssv709371,nssv709372,nssv709373,nssv709374,nssv709375,nssv709376,nssv709377,nssv709378,nssv709379,nssv709380,nssv709381,nssv709382,nssv709383,nssv709384,nssv709385,nssv709386,nssv709387,nssv709388,nssv709389,nssv709390,nssv709391,nssv709392,nssv709393,nssv709394,nssv709395,nssv709396,nssv709397,nssv709398,nssv709399,nssv709400,nssv709401,nssv709402,nssv709403,nssv709404,nssv709405,nssv709406,nssv709407,nssv709408,nssv709409,nssv709410,nssv709411,nssv709412,nssv709413,nssv709414,nssv709415,nssv709416,nssv709417,nssv709418,nssv709419,nssv709420,nssv709421,nssv709422,nssv709423,nssv709424,nssv709425,essv50116,nssv709441,nssv709442,nssv709260,nssv709261,nssv709262,nssv709263,nssv709264,nssv709265,nssv709266,nssv709267,nssv709268,nssv709269,nssv709270,nssv709271,nssv709272,nssv709273,nssv709274,nssv709275,nssv709276,nssv709277,nssv709278,nssv709279,nssv709280,nssv709281,nssv709282,nssv709283,nssv709284,nssv709285,nssv709286,nssv709287,nssv709288,nssv709289,nssv709290,nssv709291,nssv709292,nssv709293,nssv709294,nssv709295,nssv709296,nssv709297,nssv709298,nssv709299,nssv709300,nssv709301,nssv709302,nssv709303,nssv709304,nssv709305,nssv709306,nssv709307,nssv709308,nssv709309,nssv709310,nssv709311,nssv709312,nssv709313,nssv709314,nssv709315,nssv709316,nssv709317,nssv709318,nssv709319,nssv709320,nssv709321,nssv709322,nssv709323,nssv709324,nssv709325,nssv709326,nssv709327,nssv709328,nssv709329,nssv709330,nssv709331,nssv709332,nssv709333,nssv709334,nssv709335,nssv709336,nssv709337,nssv709338,nssv709339,nssv709340,nssv709341,nssv709342,nssv709343,nssv709344,nssv709345,nssv709449,nssv709437,nssv709438,nssv709439,nssv709440,nssv709445,nssv709446,nssv709447,nssv709448,nssv709242,nssv709243,nssv709244,nssv709245,nssv709246,nssv709247,nssv709248,nssv709249,nssv709250,nssv709251,nssv709252,nssv709253,nssv709254,nssv709255,nssv709256,nssv709257,nssv709258,nssv709259,nssv709454,nssv709436,nssv709450,nssv709451,nssv709452,nssv709453;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=202;samples=sample_nssv709258,sample_nssv709279,sample_nssv709278,sample_nssv709273,sample_nssv709272,sample_nssv709271,sample_nssv709270,sample_nssv709277,sample_nssv709276,sample_nssv709275,sample_nssv709274,sample_nssv709291,sample_nssv709290,sample_nssv709372,sample_nssv709373,sample_nssv709370,sample_nssv709371,sample_nssv709376,sample_nssv709377,sample_nssv709374,sample_nssv709375,sample_nssv709378,sample_nssv709379,sample_nssv709299,sample_nssv709268,sample_nssv709269,sample_nssv709298,sample_nssv709264,sample_nssv709265,sample_nssv709266,sample_nssv709267,sample_nssv709260,sample_nssv709261,sample_nssv709262,sample_nssv709263,sample_nssv709347,sample_nssv709346,sample_nssv709345,sample_nssv709344,sample_nssv709343,sample_nssv709342,sample_nssv709341,sample_nssv709340,sample_nssv709349,sample_nssv709348,sample_nssv709454,sample_nssv709242,sample_nssv709452,sample_nssv709451,sample_nssv709450,sample_nssv709243,sample_nssv709358,sample_nssv709359,sample_nssv709293,sample_nssv709292,sample_nssv709295,sample_nssv709294,sample_nssv709297,sample_nssv709296,sample_nssv709350,sample_nssv709351,sample_nssv709352,sample_nssv709353,sample_nssv709354,sample_nssv709355,sample_nssv709356,sample_nssv709357,sample_nssv709338,sample_nssv709440,sample_nssv709441,sample_nssv709442,sample_nssv709445,sample_nssv709446,sample_nssv709447,sample_nssv709448,sample_nssv709449,sample_nssv709282,sample_nssv709283,sample_nssv709280,sample_nssv709281,sample_nssv709286,sample_nssv709287,sample_nssv709284,sample_nssv709285,sample_nssv709325,sample_nssv709324,sample_nssv709288,sample_nssv709289,sample_nssv709321,sample_nssv709320,sample_nssv709323,sample_nssv709322,sample_nssv709437,sample_nssv709436,sample_nssv709439,sample_nssv709438,sample_nssv709248,sample_nssv709327,sample_nssv709339,sample_nssv709336,sample_nssv709337,sample_nssv709334,sample_nssv709335,sample_nssv709332,sample_nssv709333,sample_nssv709411,sample_nssv709331,sample_nssv709303,sample_nssv709302,sample_nssv709301,sample_nssv709300,sample_nssv709307,sample_nssv709306,sample_nssv709305,sample_nssv709304,sample_nssv709453,sample_nssv709309,sample_nssv709308,sample_nssv709389,sample_nssv709425,sample_nssv709422,sample_nssv709423,sample_nssv709420,sample_nssv709421,sample_nssv709383,sample_nssv709382,sample_nssv709381,sample_nssv709380,sample_nssv709387,sample_nssv709386,sample_nssv709385,sample_nssv709384,sample_nssv709254,sample_nssv709257,sample_nssv709256,sample_nssv709330,sample_nssv709251,sample_nssv709250,sample_nssv709314,sample_nssv709315,sample_nssv709316,sample_nssv709317,sample_nssv709310,sample_nssv709311,sample_nssv709312,sample_nssv709313,sample_nssv709252,sample_nssv709318,sample_nssv709319,sample_nssv709255,sample_nssv709394,sample_nssv709419,sample_nssv709418,sample_nssv709398,sample_nssv709399,sample_nssv709253,sample_nssv709395,sample_nssv709413,sample_nssv709412,sample_nssv709396,sample_nssv709410,sample_nssv709390,sample_nssv709391,sample_nssv709415,sample_nssv709414,sample_nssv709397,sample_nssv709417,sample_nssv709416,NA18517,sample_nssv709362,sample_nssv709392,sample_nssv709329,sample_nssv709393,sample_nssv709328,sample_nssv709246,sample_nssv709247,sample_nssv709244,sample_nssv709245,sample_nssv709408,sample_nssv709409,sample_nssv709249,sample_nssv709404,sample_nssv709405,sample_nssv709406,sample_nssv709407,sample_nssv709400,sample_nssv709401,sample_nssv709402,sample_nssv709403,sample_nssv709326,sample_nssv709259,sample_nssv709424,sample_nssv709361,sample_nssv709360,sample_nssv709363,sample_nssv709388,sample_nssv709365,sample_nssv709364,sample_nssv709367,sample_nssv709366,sample_nssv709369,sample_nssv709368;num_samples_tested=1540;frequency=13.12%;num_unique_samples_tested=1540;nr_frequency=13.11%;PopulationSummary=European 201:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7022698	7023493	.	.	.	ID=gssv911;Name=gssv911;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7022668;inner_start=7022698;inner_end=7023493;outer_end=7023494;inner_rank=7;num_variants=202;variants=nssv709346,nssv709347,nssv709348,nssv709349,nssv709350,nssv709351,nssv709352,nssv709353,nssv709354,nssv709355,nssv709356,nssv709357,nssv709358,nssv709359,nssv709360,nssv709361,nssv709362,nssv709363,nssv709364,nssv709365,nssv709366,nssv709367,nssv709368,nssv709369,nssv709370,nssv709371,nssv709372,nssv709373,nssv709374,nssv709375,nssv709376,nssv709377,nssv709378,nssv709379,nssv709380,nssv709381,nssv709382,nssv709383,nssv709384,nssv709385,nssv709386,nssv709387,nssv709388,nssv709389,nssv709390,nssv709391,nssv709392,nssv709393,nssv709394,nssv709395,nssv709396,nssv709397,nssv709398,nssv709399,nssv709400,nssv709401,nssv709402,nssv709403,nssv709404,nssv709405,nssv709406,nssv709407,nssv709408,nssv709409,nssv709410,nssv709411,nssv709412,nssv709413,nssv709414,nssv709415,nssv709416,nssv709417,nssv709418,nssv709419,nssv709420,nssv709421,nssv709422,nssv709423,nssv709424,nssv709425,essv50116,nssv709441,nssv709442,nssv709260,nssv709261,nssv709262,nssv709263,nssv709264,nssv709265,nssv709266,nssv709267,nssv709268,nssv709269,nssv709270,nssv709271,nssv709272,nssv709273,nssv709274,nssv709275,nssv709276,nssv709277,nssv709278,nssv709279,nssv709280,nssv709281,nssv709282,nssv709283,nssv709284,nssv709285,nssv709286,nssv709287,nssv709288,nssv709289,nssv709290,nssv709291,nssv709292,nssv709293,nssv709294,nssv709295,nssv709296,nssv709297,nssv709298,nssv709299,nssv709300,nssv709301,nssv709302,nssv709303,nssv709304,nssv709305,nssv709306,nssv709307,nssv709308,nssv709309,nssv709310,nssv709311,nssv709312,nssv709313,nssv709314,nssv709315,nssv709316,nssv709317,nssv709318,nssv709319,nssv709320,nssv709321,nssv709322,nssv709323,nssv709324,nssv709325,nssv709326,nssv709327,nssv709328,nssv709329,nssv709330,nssv709331,nssv709332,nssv709333,nssv709334,nssv709335,nssv709336,nssv709337,nssv709338,nssv709339,nssv709340,nssv709341,nssv709342,nssv709343,nssv709344,nssv709345,nssv709449,nssv709437,nssv709438,nssv709439,nssv709440,nssv709445,nssv709446,nssv709447,nssv709448,nssv709242,nssv709243,nssv709244,nssv709245,nssv709246,nssv709247,nssv709248,nssv709249,nssv709250,nssv709251,nssv709252,nssv709253,nssv709254,nssv709255,nssv709256,nssv709257,nssv709258,nssv709259,nssv709454,nssv709436,nssv709450,nssv709451,nssv709452,nssv709453;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=202;samples=sample_nssv709258,sample_nssv709279,sample_nssv709278,sample_nssv709273,sample_nssv709272,sample_nssv709271,sample_nssv709270,sample_nssv709277,sample_nssv709276,sample_nssv709275,sample_nssv709274,sample_nssv709291,sample_nssv709290,sample_nssv709372,sample_nssv709373,sample_nssv709370,sample_nssv709371,sample_nssv709376,sample_nssv709377,sample_nssv709374,sample_nssv709375,sample_nssv709378,sample_nssv709379,sample_nssv709299,sample_nssv709268,sample_nssv709269,sample_nssv709298,sample_nssv709264,sample_nssv709265,sample_nssv709266,sample_nssv709267,sample_nssv709260,sample_nssv709261,sample_nssv709262,sample_nssv709263,sample_nssv709347,sample_nssv709346,sample_nssv709345,sample_nssv709344,sample_nssv709343,sample_nssv709342,sample_nssv709341,sample_nssv709340,sample_nssv709349,sample_nssv709348,sample_nssv709454,sample_nssv709242,sample_nssv709452,sample_nssv709451,sample_nssv709450,sample_nssv709243,sample_nssv709358,sample_nssv709359,sample_nssv709293,sample_nssv709292,sample_nssv709295,sample_nssv709294,sample_nssv709297,sample_nssv709296,sample_nssv709350,sample_nssv709351,sample_nssv709352,sample_nssv709353,sample_nssv709354,sample_nssv709355,sample_nssv709356,sample_nssv709357,sample_nssv709338,sample_nssv709440,sample_nssv709441,sample_nssv709442,sample_nssv709445,sample_nssv709446,sample_nssv709447,sample_nssv709448,sample_nssv709449,sample_nssv709282,sample_nssv709283,sample_nssv709280,sample_nssv709281,sample_nssv709286,sample_nssv709287,sample_nssv709284,sample_nssv709285,sample_nssv709325,sample_nssv709324,sample_nssv709288,sample_nssv709289,sample_nssv709321,sample_nssv709320,sample_nssv709323,sample_nssv709322,sample_nssv709437,sample_nssv709436,sample_nssv709439,sample_nssv709438,sample_nssv709248,sample_nssv709327,sample_nssv709339,sample_nssv709336,sample_nssv709337,sample_nssv709334,sample_nssv709335,sample_nssv709332,sample_nssv709333,sample_nssv709411,sample_nssv709331,sample_nssv709303,sample_nssv709302,sample_nssv709301,sample_nssv709300,sample_nssv709307,sample_nssv709306,sample_nssv709305,sample_nssv709304,sample_nssv709453,sample_nssv709309,sample_nssv709308,sample_nssv709389,sample_nssv709425,sample_nssv709422,sample_nssv709423,sample_nssv709420,sample_nssv709421,sample_nssv709383,sample_nssv709382,sample_nssv709381,sample_nssv709380,sample_nssv709387,sample_nssv709386,sample_nssv709385,sample_nssv709384,sample_nssv709254,sample_nssv709257,sample_nssv709256,sample_nssv709330,sample_nssv709251,sample_nssv709250,sample_nssv709314,sample_nssv709315,sample_nssv709316,sample_nssv709317,sample_nssv709310,sample_nssv709311,sample_nssv709312,sample_nssv709313,sample_nssv709252,sample_nssv709318,sample_nssv709319,sample_nssv709255,sample_nssv709394,sample_nssv709419,sample_nssv709418,sample_nssv709398,sample_nssv709399,sample_nssv709253,sample_nssv709395,sample_nssv709413,sample_nssv709412,sample_nssv709396,sample_nssv709410,sample_nssv709390,sample_nssv709391,sample_nssv709415,sample_nssv709414,sample_nssv709397,sample_nssv709417,sample_nssv709416,NA18517,sample_nssv709362,sample_nssv709392,sample_nssv709329,sample_nssv709393,sample_nssv709328,sample_nssv709246,sample_nssv709247,sample_nssv709244,sample_nssv709245,sample_nssv709408,sample_nssv709409,sample_nssv709249,sample_nssv709404,sample_nssv709405,sample_nssv709406,sample_nssv709407,sample_nssv709400,sample_nssv709401,sample_nssv709402,sample_nssv709403,sample_nssv709326,sample_nssv709259,sample_nssv709424,sample_nssv709361,sample_nssv709360,sample_nssv709363,sample_nssv709388,sample_nssv709365,sample_nssv709364,sample_nssv709367,sample_nssv709366,sample_nssv709369,sample_nssv709368;num_samples_tested=1540;frequency=13.12%;num_unique_samples_tested=1540;nr_frequency=13.11%;PopulationSummary=European 201:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7023494	7023494	.	.	.	ID=gssv911;Name=gssv911;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7022668;inner_start=7022698;inner_end=7023493;outer_end=7023494;inner_rank=7;num_variants=202;variants=nssv709346,nssv709347,nssv709348,nssv709349,nssv709350,nssv709351,nssv709352,nssv709353,nssv709354,nssv709355,nssv709356,nssv709357,nssv709358,nssv709359,nssv709360,nssv709361,nssv709362,nssv709363,nssv709364,nssv709365,nssv709366,nssv709367,nssv709368,nssv709369,nssv709370,nssv709371,nssv709372,nssv709373,nssv709374,nssv709375,nssv709376,nssv709377,nssv709378,nssv709379,nssv709380,nssv709381,nssv709382,nssv709383,nssv709384,nssv709385,nssv709386,nssv709387,nssv709388,nssv709389,nssv709390,nssv709391,nssv709392,nssv709393,nssv709394,nssv709395,nssv709396,nssv709397,nssv709398,nssv709399,nssv709400,nssv709401,nssv709402,nssv709403,nssv709404,nssv709405,nssv709406,nssv709407,nssv709408,nssv709409,nssv709410,nssv709411,nssv709412,nssv709413,nssv709414,nssv709415,nssv709416,nssv709417,nssv709418,nssv709419,nssv709420,nssv709421,nssv709422,nssv709423,nssv709424,nssv709425,essv50116,nssv709441,nssv709442,nssv709260,nssv709261,nssv709262,nssv709263,nssv709264,nssv709265,nssv709266,nssv709267,nssv709268,nssv709269,nssv709270,nssv709271,nssv709272,nssv709273,nssv709274,nssv709275,nssv709276,nssv709277,nssv709278,nssv709279,nssv709280,nssv709281,nssv709282,nssv709283,nssv709284,nssv709285,nssv709286,nssv709287,nssv709288,nssv709289,nssv709290,nssv709291,nssv709292,nssv709293,nssv709294,nssv709295,nssv709296,nssv709297,nssv709298,nssv709299,nssv709300,nssv709301,nssv709302,nssv709303,nssv709304,nssv709305,nssv709306,nssv709307,nssv709308,nssv709309,nssv709310,nssv709311,nssv709312,nssv709313,nssv709314,nssv709315,nssv709316,nssv709317,nssv709318,nssv709319,nssv709320,nssv709321,nssv709322,nssv709323,nssv709324,nssv709325,nssv709326,nssv709327,nssv709328,nssv709329,nssv709330,nssv709331,nssv709332,nssv709333,nssv709334,nssv709335,nssv709336,nssv709337,nssv709338,nssv709339,nssv709340,nssv709341,nssv709342,nssv709343,nssv709344,nssv709345,nssv709449,nssv709437,nssv709438,nssv709439,nssv709440,nssv709445,nssv709446,nssv709447,nssv709448,nssv709242,nssv709243,nssv709244,nssv709245,nssv709246,nssv709247,nssv709248,nssv709249,nssv709250,nssv709251,nssv709252,nssv709253,nssv709254,nssv709255,nssv709256,nssv709257,nssv709258,nssv709259,nssv709454,nssv709436,nssv709450,nssv709451,nssv709452,nssv709453;num_studies=2;studies=Conrad2009,Cooper2011;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=202;samples=sample_nssv709258,sample_nssv709279,sample_nssv709278,sample_nssv709273,sample_nssv709272,sample_nssv709271,sample_nssv709270,sample_nssv709277,sample_nssv709276,sample_nssv709275,sample_nssv709274,sample_nssv709291,sample_nssv709290,sample_nssv709372,sample_nssv709373,sample_nssv709370,sample_nssv709371,sample_nssv709376,sample_nssv709377,sample_nssv709374,sample_nssv709375,sample_nssv709378,sample_nssv709379,sample_nssv709299,sample_nssv709268,sample_nssv709269,sample_nssv709298,sample_nssv709264,sample_nssv709265,sample_nssv709266,sample_nssv709267,sample_nssv709260,sample_nssv709261,sample_nssv709262,sample_nssv709263,sample_nssv709347,sample_nssv709346,sample_nssv709345,sample_nssv709344,sample_nssv709343,sample_nssv709342,sample_nssv709341,sample_nssv709340,sample_nssv709349,sample_nssv709348,sample_nssv709454,sample_nssv709242,sample_nssv709452,sample_nssv709451,sample_nssv709450,sample_nssv709243,sample_nssv709358,sample_nssv709359,sample_nssv709293,sample_nssv709292,sample_nssv709295,sample_nssv709294,sample_nssv709297,sample_nssv709296,sample_nssv709350,sample_nssv709351,sample_nssv709352,sample_nssv709353,sample_nssv709354,sample_nssv709355,sample_nssv709356,sample_nssv709357,sample_nssv709338,sample_nssv709440,sample_nssv709441,sample_nssv709442,sample_nssv709445,sample_nssv709446,sample_nssv709447,sample_nssv709448,sample_nssv709449,sample_nssv709282,sample_nssv709283,sample_nssv709280,sample_nssv709281,sample_nssv709286,sample_nssv709287,sample_nssv709284,sample_nssv709285,sample_nssv709325,sample_nssv709324,sample_nssv709288,sample_nssv709289,sample_nssv709321,sample_nssv709320,sample_nssv709323,sample_nssv709322,sample_nssv709437,sample_nssv709436,sample_nssv709439,sample_nssv709438,sample_nssv709248,sample_nssv709327,sample_nssv709339,sample_nssv709336,sample_nssv709337,sample_nssv709334,sample_nssv709335,sample_nssv709332,sample_nssv709333,sample_nssv709411,sample_nssv709331,sample_nssv709303,sample_nssv709302,sample_nssv709301,sample_nssv709300,sample_nssv709307,sample_nssv709306,sample_nssv709305,sample_nssv709304,sample_nssv709453,sample_nssv709309,sample_nssv709308,sample_nssv709389,sample_nssv709425,sample_nssv709422,sample_nssv709423,sample_nssv709420,sample_nssv709421,sample_nssv709383,sample_nssv709382,sample_nssv709381,sample_nssv709380,sample_nssv709387,sample_nssv709386,sample_nssv709385,sample_nssv709384,sample_nssv709254,sample_nssv709257,sample_nssv709256,sample_nssv709330,sample_nssv709251,sample_nssv709250,sample_nssv709314,sample_nssv709315,sample_nssv709316,sample_nssv709317,sample_nssv709310,sample_nssv709311,sample_nssv709312,sample_nssv709313,sample_nssv709252,sample_nssv709318,sample_nssv709319,sample_nssv709255,sample_nssv709394,sample_nssv709419,sample_nssv709418,sample_nssv709398,sample_nssv709399,sample_nssv709253,sample_nssv709395,sample_nssv709413,sample_nssv709412,sample_nssv709396,sample_nssv709410,sample_nssv709390,sample_nssv709391,sample_nssv709415,sample_nssv709414,sample_nssv709397,sample_nssv709417,sample_nssv709416,NA18517,sample_nssv709362,sample_nssv709392,sample_nssv709329,sample_nssv709393,sample_nssv709328,sample_nssv709246,sample_nssv709247,sample_nssv709244,sample_nssv709245,sample_nssv709408,sample_nssv709409,sample_nssv709249,sample_nssv709404,sample_nssv709405,sample_nssv709406,sample_nssv709407,sample_nssv709400,sample_nssv709401,sample_nssv709402,sample_nssv709403,sample_nssv709326,sample_nssv709259,sample_nssv709424,sample_nssv709361,sample_nssv709360,sample_nssv709363,sample_nssv709388,sample_nssv709365,sample_nssv709364,sample_nssv709367,sample_nssv709366,sample_nssv709369,sample_nssv709368;num_samples_tested=1540;frequency=13.12%;num_unique_samples_tested=1540;nr_frequency=13.11%;PopulationSummary=European 201:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7022928	7022928	.	.	.	ID=gssv913;Name=gssv913;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7022928;inner_start=7022964;inner_end=7023529;outer_end=7023529;inner_rank=7;num_variants=3;variants=essv44891,nssv709456,nssv709455;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=3;samples=sample_nssv709456,sample_nssv709455,NA12489;num_samples_tested=1540;frequency=0.19%;num_unique_samples_tested=1540;nr_frequency=0.19%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7022964	7023529	.	.	.	ID=gssv913;Name=gssv913;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7022928;inner_start=7022964;inner_end=7023529;outer_end=7023529;inner_rank=7;num_variants=3;variants=essv44891,nssv709456,nssv709455;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=3;samples=sample_nssv709456,sample_nssv709455,NA12489;num_samples_tested=1540;frequency=0.19%;num_unique_samples_tested=1540;nr_frequency=0.19%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7023529	7023529	.	.	.	ID=gssv913;Name=gssv913;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7022928;inner_start=7022964;inner_end=7023529;outer_end=7023529;inner_rank=7;num_variants=3;variants=essv44891,nssv709456,nssv709455;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=3;samples=sample_nssv709456,sample_nssv709455,NA12489;num_samples_tested=1540;frequency=0.19%;num_unique_samples_tested=1540;nr_frequency=0.19%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7567412	7567412	.	.	.	ID=gssv953;Name=gssv953;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7567412;inner_start=7567948;inner_end=7571412;outer_end=7571753;inner_rank=12;num_variants=2;variants=nssv709462,nssv26894;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=2;samples=sample_nssv709462,NA18860;num_samples_tested=1530;frequency=0.13%;num_unique_samples_tested=1530;nr_frequency=0.13%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7567948	7571412	.	.	.	ID=gssv953;Name=gssv953;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7567412;inner_start=7567948;inner_end=7571412;outer_end=7571753;inner_rank=12;num_variants=2;variants=nssv709462,nssv26894;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=2;samples=sample_nssv709462,NA18860;num_samples_tested=1530;frequency=0.13%;num_unique_samples_tested=1530;nr_frequency=0.13%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7571753	7571753	.	.	.	ID=gssv953;Name=gssv953;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7567412;inner_start=7567948;inner_end=7571412;outer_end=7571753;inner_rank=12;num_variants=2;variants=nssv709462,nssv26894;num_studies=2;studies=Perry2008,Cooper2011;num_platforms=2;platforms=AgilentCustom_015685+015686+244K,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,ADM2;num_samples=2;samples=sample_nssv709462,NA18860;num_samples_tested=1530;frequency=0.13%;num_unique_samples_tested=1530;nr_frequency=0.13%;PopulationSummary=European 1:Asian 0:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7483023	7483023	.	.	.	ID=gssv954;Name=gssv954;variant_type=CNV;variant_sub_type=Loss;outer_start=7483023;inner_start=7483043;inner_end=7486288;outer_end=7486289;inner_rank=8;num_variants=7;variants=essv6179805,essv6204851,essv9846669,essv9846670,essv9846671,essv9846672,essv9846673;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=HG02643,NA19455,NA19472,NA20359,NA19036;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7483043	7486288	.	.	.	ID=gssv954;Name=gssv954;variant_type=CNV;variant_sub_type=Loss;outer_start=7483023;inner_start=7483043;inner_end=7486288;outer_end=7486289;inner_rank=8;num_variants=7;variants=essv6179805,essv6204851,essv9846669,essv9846670,essv9846671,essv9846672,essv9846673;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=HG02643,NA19455,NA19472,NA20359,NA19036;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7486289	7486289	.	.	.	ID=gssv954;Name=gssv954;variant_type=CNV;variant_sub_type=Loss;outer_start=7483023;inner_start=7483043;inner_end=7486288;outer_end=7486289;inner_rank=8;num_variants=7;variants=essv6179805,essv6204851,essv9846669,essv9846670,essv9846671,essv9846672,essv9846673;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=HG02643,NA19455,NA19472,NA20359,NA19036;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 0:Asian 0:Mexican 0:African 5:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7569215	7569215	.	.	.	ID=gssv955;Name=gssv955;variant_type=CNV;variant_sub_type=Loss;outer_start=7569215;inner_start=7569416;inner_end=7571963;outer_end=7572326;inner_rank=8;num_variants=17;variants=essv5286155,nssv709466,nssv1420846,nssv1421440,nssv1422357,nssv1423943,nssv1424725,nssv1425484,nssv1426370,nssv1427245,nssv1428015,nssv1430329,nssv1431057,nssv1431790,nssv1438581,nssv1440113,nssv709465;num_studies=4;studies=Ju2010,Park2010,McKernan2009,Cooper2011;num_platforms=4;platforms=SOLiD,Illumina_GA,Custom_Illumina_1.2M,Agilent24M;num_algorithms=4;algorithms=PEM,ReadDepth,Custom_HMM,ADM2;num_samples=17;samples=NA18564,NA10851,NA18552,AK18,NA18582,AK2,AK20,sample_nssv709466,AK6,AK4,NA18973,AK8,NA18507,AK16,sample_nssv709465,AK10,NA18997;num_samples_tested=1532;frequency=1.11%;num_unique_samples_tested=1532;nr_frequency=1.1%;PopulationSummary=European 3:Asian 13:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7569416	7571963	.	.	.	ID=gssv955;Name=gssv955;variant_type=CNV;variant_sub_type=Loss;outer_start=7569215;inner_start=7569416;inner_end=7571963;outer_end=7572326;inner_rank=8;num_variants=17;variants=essv5286155,nssv709466,nssv1420846,nssv1421440,nssv1422357,nssv1423943,nssv1424725,nssv1425484,nssv1426370,nssv1427245,nssv1428015,nssv1430329,nssv1431057,nssv1431790,nssv1438581,nssv1440113,nssv709465;num_studies=4;studies=Ju2010,Park2010,McKernan2009,Cooper2011;num_platforms=4;platforms=SOLiD,Illumina_GA,Custom_Illumina_1.2M,Agilent24M;num_algorithms=4;algorithms=PEM,ReadDepth,Custom_HMM,ADM2;num_samples=17;samples=NA18564,NA10851,NA18552,AK18,NA18582,AK2,AK20,sample_nssv709466,AK6,AK4,NA18973,AK8,NA18507,AK16,sample_nssv709465,AK10,NA18997;num_samples_tested=1532;frequency=1.11%;num_unique_samples_tested=1532;nr_frequency=1.1%;PopulationSummary=European 3:Asian 13:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7572326	7572326	.	.	.	ID=gssv955;Name=gssv955;variant_type=CNV;variant_sub_type=Loss;outer_start=7569215;inner_start=7569416;inner_end=7571963;outer_end=7572326;inner_rank=8;num_variants=17;variants=essv5286155,nssv709466,nssv1420846,nssv1421440,nssv1422357,nssv1423943,nssv1424725,nssv1425484,nssv1426370,nssv1427245,nssv1428015,nssv1430329,nssv1431057,nssv1431790,nssv1438581,nssv1440113,nssv709465;num_studies=4;studies=Ju2010,Park2010,McKernan2009,Cooper2011;num_platforms=4;platforms=SOLiD,Illumina_GA,Custom_Illumina_1.2M,Agilent24M;num_algorithms=4;algorithms=PEM,ReadDepth,Custom_HMM,ADM2;num_samples=17;samples=NA18564,NA10851,NA18552,AK18,NA18582,AK2,AK20,sample_nssv709466,AK6,AK4,NA18973,AK8,NA18507,AK16,sample_nssv709465,AK10,NA18997;num_samples_tested=1532;frequency=1.11%;num_unique_samples_tested=1532;nr_frequency=1.1%;PopulationSummary=European 3:Asian 13:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7569215	7569215	.	.	.	ID=gssv957;Name=gssv957;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569215;inner_start=7569470;inner_end=7571514;outer_end=7571521;inner_rank=7;num_variants=13;variants=essv33020,essv79623,essv35948,essv81734,essv43325,essv65807,essv38793,essv58071,essv76994,essv54200,essv67734,essv47411,nssv709464;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=13;samples=NA18858,NA18909,NA18907,NA12749,NA19147,NA18508,NA18511,NA19108,NA18861,NA19240,sample_nssv709464,NA19257,NA19114;num_samples_tested=1540;frequency=0.84%;num_unique_samples_tested=1540;nr_frequency=0.84%;PopulationSummary=European 2:Asian 0:Mexican 0:African 11:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7569470	7571514	.	.	.	ID=gssv957;Name=gssv957;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569215;inner_start=7569470;inner_end=7571514;outer_end=7571521;inner_rank=7;num_variants=13;variants=essv33020,essv79623,essv35948,essv81734,essv43325,essv65807,essv38793,essv58071,essv76994,essv54200,essv67734,essv47411,nssv709464;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=13;samples=NA18858,NA18909,NA18907,NA12749,NA19147,NA18508,NA18511,NA19108,NA18861,NA19240,sample_nssv709464,NA19257,NA19114;num_samples_tested=1540;frequency=0.84%;num_unique_samples_tested=1540;nr_frequency=0.84%;PopulationSummary=European 2:Asian 0:Mexican 0:African 11:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7571521	7571521	.	.	.	ID=gssv957;Name=gssv957;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569215;inner_start=7569470;inner_end=7571514;outer_end=7571521;inner_rank=7;num_variants=13;variants=essv33020,essv79623,essv35948,essv81734,essv43325,essv65807,essv38793,essv58071,essv76994,essv54200,essv67734,essv47411,nssv709464;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=13;samples=NA18858,NA18909,NA18907,NA12749,NA19147,NA18508,NA18511,NA19108,NA18861,NA19240,sample_nssv709464,NA19257,NA19114;num_samples_tested=1540;frequency=0.84%;num_unique_samples_tested=1540;nr_frequency=0.84%;PopulationSummary=European 2:Asian 0:Mexican 0:African 11:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7569911	7569911	.	.	.	ID=gssv959;Name=gssv959;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569911;inner_start=7570061;inner_end=7571688;outer_end=7571996;inner_rank=7;num_variants=1057;variants=nssv709578,nssv709579,nssv709580,essv4836092,nssv709602,nssv709603,essv72605,nssv709610,nssv709611,nssv709621,nssv709622,nssv709623,essv26356,nssv709630,nssv709631,essv9740091,essv41815,essv6707252,essv6773424,essv5397363,essv5399289,essv5404078,essv5412555,essv5420861,essv5421776,essv5428010,essv5429536,essv5430800,essv5431607,essv5432008,essv5433351,essv5433597,essv5440192,essv5445583,essv5446598,essv5450460,essv5461375,essv5465801,essv5479781,essv5482762,essv5489293,essv5497751,essv5499302,essv5500732,essv5503175,essv5505561,essv5506505,essv5507085,essv5511424,essv5522275,essv5536940,essv5537806,essv5542914,essv5552465,essv5556929,essv5559722,essv5559985,essv5568082,essv5576898,essv5589809,essv5596979,essv5597762,essv5598326,essv5602417,essv5605115,essv5609761,essv5612440,essv5618196,essv5620153,essv5621444,essv5621604,essv5621944,essv5622190,essv5630336,essv5631596,essv5636594,essv5646630,essv5647981,essv5648473,essv5658671,essv5675761,essv5686531,essv5687666,essv5691391,essv5692329,essv5703541,essv5708133,essv5717552,essv5727746,essv5732462,essv5744317,essv5749177,essv5754165,essv5766898,essv5771007,essv5771428,essv5774461,essv5778687,essv5781061,essv5790430,essv5793684,essv5796224,essv5798315,essv5799224,essv5800783,essv5806520,essv5815954,essv5818092,essv5819410,essv5823780,essv5825537,essv5826648,essv5829887,essv5830971,essv5833907,essv5841667,essv5852805,essv5853039,essv5858235,essv5863502,essv5863653,essv5875330,essv5876669,essv5883741,essv5887358,essv5888481,essv5891446,essv5896582,essv5898397,essv5898881,essv5898893,essv5902353,essv5902435,essv5908549,essv5909185,essv5913542,essv5921143,essv5922932,essv5924719,essv5927521,essv5927894,essv5928849,essv5931759,essv5942501,essv5950392,essv5957916,essv5961649,essv5966237,essv5971897,essv5973166,essv5978907,essv5979160,essv5981620,essv5998324,essv6004098,essv6007472,essv6009563,essv6013738,essv6014564,essv6015013,essv6016935,essv6018100,essv6027439,essv6030341,essv6039563,essv6041407,essv6044362,essv6046099,essv6049159,essv6053521,essv6057755,essv6061070,essv6063213,essv6068568,essv6069004,essv6069629,essv6075734,essv6081607,essv6083900,essv6085784,essv6086542,essv6090700,essv6099962,essv6100322,essv6109378,essv6118990,essv6119227,essv6123121,essv6127324,essv6133433,essv6134386,essv6135664,essv6146355,essv6148159,essv6149199,essv6160626,essv6160948,essv6167253,essv6169504,essv6171336,essv6189325,essv6193427,essv6193468,essv6199820,essv6202404,essv6204790,essv6207963,essv6214231,essv6216050,essv6228501,essv6231964,essv6233292,essv6233645,essv6242378,essv6246172,essv6253213,essv6253385,essv6260423,essv6266308,essv6271138,essv6278813,essv6281857,essv6286695,essv6287100,essv6288927,essv6290633,essv6291742,essv6292739,essv6294648,essv6295813,essv6298889,essv6301711,essv6303084,essv6303515,essv6303691,essv6308899,essv6310275,essv6315369,essv6317995,essv6325203,essv6325429,essv6332805,essv6354211,essv6354985,essv6363379,essv6363517,essv6364050,essv6366028,essv6366589,essv6367627,essv6372156,essv6376701,essv6377227,essv6385424,essv6387037,essv6392822,essv6399921,essv6413777,essv6418480,essv6418911,essv6419778,essv6424790,essv6431057,essv6436832,essv6438064,essv6438446,essv6442019,essv6442157,essv6445191,essv6445705,essv6447140,essv6449470,essv6453378,essv6458057,essv6458151,essv6460438,essv6460683,essv6464636,essv6465910,essv6471769,essv6481631,essv6483263,essv6491045,essv6495337,essv6496136,essv6497319,essv6506715,essv6506775,essv6514311,essv6515447,essv6519589,essv6527507,essv6528378,essv6535980,essv6536764,essv6538809,essv6538832,essv6542461,essv6542778,essv6543277,essv6544648,essv6544861,essv6548964,essv6561443,essv6564812,essv6572516,essv6575482,essv6577034,essv6578015,essv6581519,essv6595199,essv6597320,essv6780853,essv6885976,essv6883249,essv6682816,essv6703852,essv29674,essv9846746,essv9846747,essv9846748,essv9846749,essv9846750,essv9846751,essv9846752,essv9846753,essv9846754,essv9846755,essv9846756,essv9846757,essv9846758,essv9846759,essv9846760,essv9846761,essv9846762,essv9846763,essv9846764,essv9846765,essv9846766,essv9846767,essv9846768,essv9846769,essv9846770,essv9846771,essv9846772,essv9846773,essv9846774,essv9846775,essv9846776,essv9846777,essv9846778,essv9846779,essv9846780,essv9846781,essv9846782,essv9846783,essv9846784,essv9846785,essv9846786,essv9846787,essv9846788,essv9846789,essv9846790,essv9846791,essv9846792,essv9846793,essv9846794,essv9846795,essv9846796,essv9846797,essv9846798,essv9846799,essv9846800,essv9846801,essv9846802,essv9846803,essv9846804,essv9846805,essv9846806,essv9846807,essv9846808,essv9846809,essv9846810,essv9846811,essv9846812,essv9846813,essv9846814,essv9846815,essv9846816,essv9846817,essv9846818,essv9846819,essv9846820,essv9846821,essv9846822,essv9846823,essv9846824,essv9846825,essv9846826,essv9846827,essv9846828,essv9846829,essv9846830,essv9846831,essv9846832,essv9846833,essv9846834,essv9846835,essv9846836,essv9846837,essv9846838,essv9846839,essv9846840,essv9846841,essv9846842,essv9846843,essv9846844,essv9846845,essv9846846,essv9846847,essv9846848,essv9846849,essv9846850,essv9846851,essv9846852,essv9846853,essv9846854,essv9846855,essv9846856,essv9846857,essv9846858,essv9846859,essv9846860,essv9846861,essv9846862,essv9846863,essv9846864,essv9846865,essv9846866,essv9846867,essv9846868,essv9846869,essv9846870,essv9846871,essv9846872,essv9846873,essv9846874,essv9846875,essv9846876,essv9846877,essv9846878,essv9846879,essv9846880,essv9846881,essv9846882,essv9846883,essv9846884,essv9846885,essv9846886,essv9846887,essv9846888,essv9846889,essv9846890,essv9846891,essv9846892,essv9846893,essv9846894,essv9846895,essv9846896,essv9846897,essv9846898,essv9846899,essv9846900,essv9846901,essv9846902,essv9846903,essv9846904,essv9846905,essv9846906,essv9846907,essv9846908,essv9846909,essv9846910,essv9846911,essv9846912,essv9846913,essv9846914,essv9846915,essv9846916,essv9846917,essv9846918,essv9846919,essv9846920,essv9846921,essv9846922,essv9846923,essv9846924,essv9846925,essv9846926,essv9846927,essv9846928,essv9846929,essv9846930,essv9846931,essv9846932,essv9846933,essv9846934,essv9846935,essv9846936,essv9846937,essv9846938,essv9846939,essv9846940,essv9846941,essv9846942,essv9846943,essv9846944,essv9846945,essv9846946,essv9846947,essv9846948,essv9846949,essv9846950,essv9846951,essv9846952,essv9846953,essv9846954,essv9846955,essv9846956,essv9846957,essv9846958,essv9846959,essv9846960,essv9846961,essv9846962,essv9846963,essv9846964,essv9846965,essv9846966,essv9846967,essv9846968,essv9846969,essv9846970,essv9846971,essv9846972,essv9846973,essv9846974,essv9846975,essv9846976,essv9846977,essv9846978,essv9846979,essv9846980,essv9846981,essv9846982,essv9846983,essv9846984,essv9846985,essv9846986,essv9846987,essv9846988,essv9846989,essv9846990,essv9846991,essv9846992,essv9846993,essv9846994,essv9846995,essv9846996,essv9846997,essv9846998,essv9846999,essv9847000,essv9847001,essv9847002,essv9847003,essv9847004,essv9847005,essv9847006,essv9847007,essv9847008,essv9847009,essv9847010,essv9847011,essv9847012,essv9847013,essv9847014,essv9847015,essv9847016,essv9847017,essv9847018,essv9847019,essv9847020,essv9847021,essv9847022,essv9847023,essv9847024,essv9847025,essv9847026,essv9847027,essv9847028,essv9847029,essv9847030,essv9847031,essv9847032,essv9847033,essv9847034,essv9847035,essv9847036,essv9847037,essv9847038,essv9847039,essv9847040,essv9847041,essv9847042,essv9847043,essv9847044,essv9847045,essv9847046,essv9847047,essv9847048,essv9847049,essv9847050,essv9847051,essv9847052,essv9847053,essv9847054,essv9847055,essv9847056,essv9847057,essv9847058,essv9847059,essv9847060,essv9847061,essv9847062,essv9847063,essv9847064,essv9847065,essv9847066,essv9847067,essv9847068,essv9847069,essv9847070,essv9847071,essv9847072,essv9847073,essv9847074,essv9847075,essv9847076,essv9847077,essv9847078,essv9847079,essv9847080,essv9847081,essv9847082,essv9847083,essv9847084,essv9847085,essv9847086,essv9847087,essv9847088,essv9847089,essv9847090,essv9847091,essv9847092,essv9847093,essv9847094,essv9847095,essv9847096,essv9847097,essv9847098,essv9847099,essv9847100,essv9847101,essv9847102,essv9847103,essv9847104,essv9847105,essv9847106,essv9847107,essv9847108,essv9847109,essv9847110,essv9847111,essv9847112,essv9847113,essv9847114,essv9847115,essv9847116,essv9847117,essv9847118,essv9847119,essv9847120,essv9847121,essv9847122,essv9847123,essv9847124,essv9847125,essv9847126,essv9847127,essv9847128,essv9847129,essv9847130,essv9847131,essv9847132,essv9847133,essv9847134,essv9847135,essv9847136,essv9847137,essv9847138,essv9847139,essv9847140,essv9847141,essv9847142,essv9847143,essv9847144,essv9847145,essv9847146,essv9847147,essv9847148,essv9847149,essv9847150,essv9847151,essv9847152,essv9847153,essv9847154,essv9847155,essv9847156,essv9847157,essv9847158,essv9847159,essv9847160,essv9847161,essv9847162,essv9847163,essv9847164,essv9847165,essv9847166,essv9847167,essv9847168,essv9847169,essv9847170,essv9847171,essv9847172,essv9847173,essv9847174,essv9847175,essv9847176,essv9847177,essv9847178,essv9847179,essv9847180,essv9847181,essv9847182,essv9847183,essv9847184,essv9847185,essv9847186,essv9847187,essv9847188,essv9847189,essv9847190,essv9847191,essv9847192,essv9847193,essv9847194,essv9847195,essv9847196,essv9847197,essv9847198,essv9847199,essv9847200,essv9847201,essv9847202,essv9847203,essv9847204,essv9847205,essv9847206,essv9847207,essv9847208,essv9847209,essv9847210,essv9847211,essv9847212,essv9847213,essv9847214,essv9847215,essv9847216,essv9847217,essv9847218,essv9847219,essv9847220,essv9847221,essv9847222,essv9847223,essv9847224,essv9847225,essv9847226,essv9847227,essv9847228,essv9847229,essv9847230,essv9847231,essv9847232,essv9847233,essv9847234,essv9847235,essv9847236,essv9847237,essv9847238,essv9847239,essv9847240,essv9847241,essv9847242,essv9847243,essv9847244,essv9847245,essv9847246,essv9847247,essv9847248,essv9847249,essv9847250,essv9847251,essv9847252,essv9847253,essv9847254,essv9847255,essv9847256,essv9847257,essv9847258,essv9847259,essv9847260,essv9847261,essv9847262,essv9847263,essv9847264,essv9847265,essv9847266,essv9847267,essv9847268,essv9847269,essv9847270,essv9847271,essv9847272,essv9847273,essv9847274,essv9847275,essv9847276,essv9847277,essv9847278,essv9847279,essv9847280,essv9847281,essv9847282,essv9847283,essv9847284,essv9847285,essv9847286,essv9847287,essv9847288,essv9847289,essv9847290,essv9847291,essv9847292,essv9847293,essv9847294,essv9847295,essv9847296,essv9847297,essv9847298,essv9847299,essv9847300,essv9847301,essv9847302,essv9847303,essv9847304,essv9847305,essv9847306,essv9847307,essv9847308,essv9847309,essv9847310,essv9847311,essv9847312,essv9847313,essv9847314,essv9847315,essv9847316,essv9847317,essv9847318,essv9847319,essv9847320,essv9847321,essv9847322,essv9847323,essv9847324,essv9847325,essv9847326,essv9847327,essv9847328,essv9847329,essv9847330,essv9847331,essv9847332,essv9847333,essv9847334,essv9847335,essv9847336,essv9847337,essv9847338,essv9847339,essv9847340,essv9847341,essv9847342,essv9847343,essv9847344,essv9847345,essv9847346,essv9847347,essv9847348,essv9847349,essv9847350,essv9847351,essv9847352,essv9847353,essv9847354,essv9847355,essv9847356,essv9847357,essv9847358,essv9847359,essv9847360,essv9847361,essv9847362,essv9847363,essv9847364,essv9847365,essv9847366,essv9847367,essv9847368,essv9847369,essv9847370,essv9847371,essv9847372,essv9847373,essv9847374,essv9847375,essv9847376,essv9847377,essv9847378,essv9847379,essv9847380,essv9847381,essv9847382,essv9847383,essv9847384,essv9847385,essv9847386,essv9847387,essv9847388,essv9847389,essv9847390,essv9847391,essv9847392,essv9847393,essv9847394,essv9847395,essv9847396,essv9847397,essv9847398,essv9847399,essv9847400,essv9847401,essv9847402,essv9847403,essv9847404,essv9847405,essv9847406,essv9847407,essv9847408,essv9847409,essv9847410,essv9847411,essv9847412,essv9847413,essv9847414,essv9847415,essv9847416,essv9847417,essv9847418,essv9847419,essv9847420,essv9847421,essv9847422,essv9847423,essv9847424,essv9847425,essv9847426,essv9847427,essv9847428,essv9847429,essv9847430,essv9847431,essv9847432,essv9847433,essv9847434,essv9847435,essv9847436,essv9847437,essv9847438,essv9847439,essv9847440,essv9847441,essv9847442,essv9847443,essv9847444,essv9847445,essv9847446,essv9847447,essv9847448,essv9847449,essv9847450,essv9847451,essv9847452,essv9847453,essv9847454,essv9847455,essv9847456,essv9847457,essv9847458,essv9847459,essv9847460,essv9847461,essv9847462,essv9847463,essv9847464,essv9847465,essv9847466,essv9847467,essv9847468,essv9847469,essv9847470,essv9847471,essv9847472,essv9847473,essv9847474,essv9847475,essv9847476,essv6800598,essv6954723,essv6766530,essv6769506,essv39096,essv74521,essv78242,essv83364;num_studies=9;studies=Wong2012b,Cooper2011,1000GenomesPhase1,Conrad2009,Bentley2008,Wang2008,Boomsma2014,Ahn2009,1000GenomesPhase3;num_platforms=6;platforms=Custom_Illumina_1.2M,Illumina_HiSeq,Illumina_II_IIX_HiSeq,NimbleGen42M,Illumina_GA,Multiple_NGS_Sequencing;num_algorithms=6;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA,PEM,RD+PEM;num_samples=782;samples=NA20826,NA18632,NA19670,NA19776,HG02667,NA19773,NA19678,NA20762,HG01624,sample_nssv709578,sample_nssv709579,NA12058,HG03376,HG00270,HG03687,HG02836,HG00276,HG00371,HG00372,HG01392,HG01395,HG03837,HG00376,HG00427,HG00422,HG00543,HG00542,HG00428,NA18550,NA18553,NA18552,NA19064,NA18557,NA19065,sample_nssv709611,sample_nssv709610,NA06989,HG02470,NA11829,NA06985,NA06986,HG01518,HG02379,HG02374,HG02375,HG02373,HG02371,HG01067,NA19074,NA19077,NA19070,HG01061,HG03846,HG01612,sample_nssv709580,SSM026,NA20846,NA20849,HG00641,HG04225,HG03792,HG02396,NA20761,HG02233,HG03016,HG01525,HG04222,HG00281,HG00284,HG02016,NA18593,HG02152,HG02019,HG02151,HG02156,HG03931,HG02154,HG02155,HG01603,HG01602,HG01168,HG01600,HG01606,HG02601,HG03762,HG01161,NA12891,NA21095,HG03960,HG01766,HG01767,HG01762,NA18648,HG04186,HG04185,HG04183,HG03077,HG03836,NA19324,HG03784,HG02128,HG02127,HG03745,HG00238,NA20765,HG02089,HG00589,HG02081,NA12748,HG00584,HG02084,HG02085,HG02086,HG02087,HG00740,HG03746,HG00463,HG00464,HG01695,HG01497,HG02181,NA18618,HG03895,NA19020,HG03897,HG03803,HG02334,NA19794,HG01944,HG00577,HG01342,HG03802,HG01341,HG00304,HG03805,NA18644,HG00309,HG03808,HG02236,HG02235,NA18608,HG01028,HG00512,HG03111,NA18603,HG01188,HG03963,YH,NA20586,NA20589,NA20588,HG03624,HG00129,HG03672,HG00127,HG03629,HG00123,HG01864,HG02427,HG01461,HG02425,NA18516,SSM095,SSM096,NA20534,NA20535,HG02778,NA20530,NA20531,NA20754,NA18641,NA21110,NA21115,HG02522,HG02648,HG01858,HG01682,NA18991,NA18990,NA18993,NA18992,NA18995,NA18994,NA18997,HG02645,HG03740,HG00634,HG00637,HG01686,HG04003,HG02166,HG02165,HG02164,HG02283,HG04001,HG01849,HG01848,HG00867,NA20901,HG02049,HG02731,HG01840,HG03607,HG02047,HG01845,HG01094,HG01846,HG00705,HG00704,HG00707,HG03611,HG02050,HG00702,NA19681,HG01334,NA19038,HG03615,NA19443,HG01593,HG02585,NA19660,NA19661,NA19663,HG01985,NA07346,HG03241,SSM065,HG03976,SSM066,SSM068,HG00349,HG02629,HG03691,HG03697,sample_essv9740091,HG03928,HG00267,NA18646,HG03515,HG00263,HG00261,HG00410,NA19204,NA12778,NA19201,HG00418,HG00554,NA12776,HG00556,HG00557,NA10851,NA06994,NA19012,NA18549,NA18546,NA18545,sample_nssv709602,sample_nssv709603,HG02462,HG01933,HG01932,NA19383,NA19382,NA19380,HG04173,HG04176,NA19764,NA19075,HG03265,NA21107,HG01503,HG01504,NA21105,NA19066,HG01072,HG01073,HG02082,HG03850,HG03998,HG01375,HG03594,NA20412,NA19089,HG00177,HG00675,HG00674,HG03603,NA07000,HG03780,HG03873,HG04107,HG03858,HG01200,HG01871,NA21109,HG02382,HG01805,HG01804,HG01807,HG01801,HG01802,NA18940,HG02380,NA18946,HG01615,HG01617,HG02774,HG01757,HG04195,HG00189,HG00188,HG02736,HG00183,HG00187,HG00185,NA18639,HG03947,HG00956,HG03945,HG02138,HG02878,HG03934,HG02136,HG00382,HG02130,HG02133,NA20897,NA18637,HG00598,HG04212,HG00452,HG01104,HG00595,HG00596,HG01107,HG00590,HG00693,HG00692,NA19129,NA19083,HG00698,NA19059,NA19058,NA19750,NA11894,NA11893,NA19056,NA19055,NA19054,HG02190,NA18616,NA18612,NA18613,HG00250,NA18597,NA18596,HG00259,HG00258,HG00525,HG00524,HG03950,HG02810,NA19338,NA18577,NA18576,NA18574,HG03857,NA18571,NA18570,NA18579,NA19904,HG04141,HG04140,NA19900,HG00130,HG03833,HG00137,NA19786,HG02355,HG02356,HG01577,HG00111,HG02450,HG02805,NA18507,NA18505,NA20502,NA20507,NA18986,NA18984,NA18985,NA18982,NA20769,NA18989,NA20291,NA07056,HG03771,HG03770,HG02536,HG00628,HG03172,HG00149,NA18957,HG00146,HG00145,HG00141,HG04090,HG04093,NA20340,HG04094,NA20344,HG01857,NA11933,HG01852,HG01850,HG02178,NA19171,NA19172,HG01859,HG02078,NA18934,HG01148,HG02073,HG02072,HG02076,HG01669,HG01668,NA18979,HG02952,HG00717,HG01784,HG01785,NA18973,NA18971,HG02620,NA18976,NA18974,HG00982,NA21104,NA20906,HG01105,NA19470,NA21108,HG04155,NA19719,HG03258,NA19652,HG02385,HG02384,HG02389,NA19716,NA19717,NA21087,HG00350,HG00351,HG00356,HG00357,HG04159,HG02017,NA19783,NA19782,HG00566,HG04200,HG00560,HG04202,HG03667,HG02040,HG03917,HG04209,HG03913,HG02691,HG02690,HG01847,NA12761,NA12763,NA19004,NA19005,NA19002,NA19003,HG01797,HG04061,sample_nssv709631,sample_nssv709630,HG01531,HG01530,HG02494,HG03228,HG02497,NA11843,HG02493,NA19399,HG01920,HG02490,HG00326,HG02253,HG00324,HG00323,NA12004,NA18954,HG02259,NA20541,NA20540,HG00329,NA20542,HG01047,HG01046,HG01049,NA19095,NA18623,NA18622,HG03867,HG03229,NA20862,NA20866,HG01977,NA11840,NA21119,NA12341,HG00663,HG00108,NA12348,HG02406,HG02407,HG01405,HG02402,NA19119,HG03488,HG02250,HG01813,HG01810,HG01817,HG02032,HG02661,HG01628,NA20818,NA20816,NA20812,NA20811,HG02186,HG02541,HG03727,HG03048,NA20339,NA21141,HG04062,NA19225,HG03385,HG01632,HG01869,HG03082,HG01867,HG01597,HG01865,HG01280,HG01862,HG00446,NA20882,HG01130,HG00448,HG01137,HG00689,HG03826,HG00257,NA19762,NA18629,HG01177,NA19041,HG03985,NA12044,HG03057,HG03432,SSM002,HG02185,HG00244,HG00245,HG00246,HG00368,HG00240,HG03941,NA18582,HG00360,HG00366,HG00365,NA12275,NA19347,NA18865,NA20905,NA12716,NA12272,HG00534,NA18747,NA18740,HG00533,HG00531,NA18564,NA18565,NA18561,HG03765,NA19913,HG04152,NA19917,HG04156,HG03823,NA20516,HG02360,HG02364,HG01566,NA20282,HG01259,NA19320,NA20778,NA20858,HG02657,NA20771,HG00653,HG01708,HG00650,HG00657,HG00656,HG00654,HG02501,HG03925,HG00097,HG00096,HG04211,HG04198,HG00150,HG03006,NA18645,HG04019,HG02060,HG02061,HG02144,NA20900,HG02140,HG02069,HG01676,HG01675,HG01673,HG01670,NA12889,HG01174,HG00844,HG01171,HG01170,HG01679,HG03716,HG03714,NA19463,HG03711,NA19461,HG01777,NA18961,HG01775,NA18963,NA18965,NA18966,HG02122,NA12282,NA12287,NA12286,HG02390,HG02391,HG02392,HG02394,NA19648,HG02397,HG02398,HG02399,NA19316,SSM064,NA11993,HG03478,HG03479,NA11995,HG04118,SSM041,SSM040,NA21098,NA12751,NA12750,HG02508,HG00478,HG04227,HG00472,HG00476,HG02885,HG03888,HG03645,HG03644,HG01874,HG01521,sample_nssv709621,sample_nssv709622,sample_nssv709623,HG01528,HG03237,HG00334,HG00335,NA12155,HG00337,HG03872,HG00331,HG00332,HG01699,SSM034,HG00339,HG01080,HG02870,NA18638,HG01872,HG00501,HG00500,NA18634,NA18635,NA19086,NA19087,NA19082,NA18633,NA18543,HG00110,SJK,HG00113,HG00118,HG03814,HG03684,HG04146,NA12414,HG02439,HG01414,HG02353,HG01413,NA20529,NA20528,NA20525,NA20524,HG02028,HG02020,NA21120,HG02025,HG02554,NA20808,HG02658,NA20804,HG01630,NA20807,NA20801,HG02558,NA19428,NA19429,HG00608,NA19741,NA12249,HG03757,HG03754,NA12872,NA12873,NA12874,NA12878,NA21135,NA19190,HG03971,HG02113,HG01323,HG02291,NA19023,HG02881,HG01125,HG01878,HG01088,NA19456,HG01085,NA21130,NA19455,HG01083,HG01082,NA18910,NA18917,HG01776,HG00731,NA19107,NA20894;num_samples_tested=5965;frequency=13.11%;num_unique_samples_tested=4930;nr_frequency=15.86%;PopulationSummary=European 196:Asian 389:Mexican 21:African 92:Admixed 0:MiddleEast 0:NativeAmerican 27:NorthAmerican 10:SouthAmerican 47:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7570061	7571688	.	.	.	ID=gssv959;Name=gssv959;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569911;inner_start=7570061;inner_end=7571688;outer_end=7571996;inner_rank=7;num_variants=1057;variants=nssv709578,nssv709579,nssv709580,essv4836092,nssv709602,nssv709603,essv72605,nssv709610,nssv709611,nssv709621,nssv709622,nssv709623,essv26356,nssv709630,nssv709631,essv9740091,essv41815,essv6707252,essv6773424,essv5397363,essv5399289,essv5404078,essv5412555,essv5420861,essv5421776,essv5428010,essv5429536,essv5430800,essv5431607,essv5432008,essv5433351,essv5433597,essv5440192,essv5445583,essv5446598,essv5450460,essv5461375,essv5465801,essv5479781,essv5482762,essv5489293,essv5497751,essv5499302,essv5500732,essv5503175,essv5505561,essv5506505,essv5507085,essv5511424,essv5522275,essv5536940,essv5537806,essv5542914,essv5552465,essv5556929,essv5559722,essv5559985,essv5568082,essv5576898,essv5589809,essv5596979,essv5597762,essv5598326,essv5602417,essv5605115,essv5609761,essv5612440,essv5618196,essv5620153,essv5621444,essv5621604,essv5621944,essv5622190,essv5630336,essv5631596,essv5636594,essv5646630,essv5647981,essv5648473,essv5658671,essv5675761,essv5686531,essv5687666,essv5691391,essv5692329,essv5703541,essv5708133,essv5717552,essv5727746,essv5732462,essv5744317,essv5749177,essv5754165,essv5766898,essv5771007,essv5771428,essv5774461,essv5778687,essv5781061,essv5790430,essv5793684,essv5796224,essv5798315,essv5799224,essv5800783,essv5806520,essv5815954,essv5818092,essv5819410,essv5823780,essv5825537,essv5826648,essv5829887,essv5830971,essv5833907,essv5841667,essv5852805,essv5853039,essv5858235,essv5863502,essv5863653,essv5875330,essv5876669,essv5883741,essv5887358,essv5888481,essv5891446,essv5896582,essv5898397,essv5898881,essv5898893,essv5902353,essv5902435,essv5908549,essv5909185,essv5913542,essv5921143,essv5922932,essv5924719,essv5927521,essv5927894,essv5928849,essv5931759,essv5942501,essv5950392,essv5957916,essv5961649,essv5966237,essv5971897,essv5973166,essv5978907,essv5979160,essv5981620,essv5998324,essv6004098,essv6007472,essv6009563,essv6013738,essv6014564,essv6015013,essv6016935,essv6018100,essv6027439,essv6030341,essv6039563,essv6041407,essv6044362,essv6046099,essv6049159,essv6053521,essv6057755,essv6061070,essv6063213,essv6068568,essv6069004,essv6069629,essv6075734,essv6081607,essv6083900,essv6085784,essv6086542,essv6090700,essv6099962,essv6100322,essv6109378,essv6118990,essv6119227,essv6123121,essv6127324,essv6133433,essv6134386,essv6135664,essv6146355,essv6148159,essv6149199,essv6160626,essv6160948,essv6167253,essv6169504,essv6171336,essv6189325,essv6193427,essv6193468,essv6199820,essv6202404,essv6204790,essv6207963,essv6214231,essv6216050,essv6228501,essv6231964,essv6233292,essv6233645,essv6242378,essv6246172,essv6253213,essv6253385,essv6260423,essv6266308,essv6271138,essv6278813,essv6281857,essv6286695,essv6287100,essv6288927,essv6290633,essv6291742,essv6292739,essv6294648,essv6295813,essv6298889,essv6301711,essv6303084,essv6303515,essv6303691,essv6308899,essv6310275,essv6315369,essv6317995,essv6325203,essv6325429,essv6332805,essv6354211,essv6354985,essv6363379,essv6363517,essv6364050,essv6366028,essv6366589,essv6367627,essv6372156,essv6376701,essv6377227,essv6385424,essv6387037,essv6392822,essv6399921,essv6413777,essv6418480,essv6418911,essv6419778,essv6424790,essv6431057,essv6436832,essv6438064,essv6438446,essv6442019,essv6442157,essv6445191,essv6445705,essv6447140,essv6449470,essv6453378,essv6458057,essv6458151,essv6460438,essv6460683,essv6464636,essv6465910,essv6471769,essv6481631,essv6483263,essv6491045,essv6495337,essv6496136,essv6497319,essv6506715,essv6506775,essv6514311,essv6515447,essv6519589,essv6527507,essv6528378,essv6535980,essv6536764,essv6538809,essv6538832,essv6542461,essv6542778,essv6543277,essv6544648,essv6544861,essv6548964,essv6561443,essv6564812,essv6572516,essv6575482,essv6577034,essv6578015,essv6581519,essv6595199,essv6597320,essv6780853,essv6885976,essv6883249,essv6682816,essv6703852,essv29674,essv9846746,essv9846747,essv9846748,essv9846749,essv9846750,essv9846751,essv9846752,essv9846753,essv9846754,essv9846755,essv9846756,essv9846757,essv9846758,essv9846759,essv9846760,essv9846761,essv9846762,essv9846763,essv9846764,essv9846765,essv9846766,essv9846767,essv9846768,essv9846769,essv9846770,essv9846771,essv9846772,essv9846773,essv9846774,essv9846775,essv9846776,essv9846777,essv9846778,essv9846779,essv9846780,essv9846781,essv9846782,essv9846783,essv9846784,essv9846785,essv9846786,essv9846787,essv9846788,essv9846789,essv9846790,essv9846791,essv9846792,essv9846793,essv9846794,essv9846795,essv9846796,essv9846797,essv9846798,essv9846799,essv9846800,essv9846801,essv9846802,essv9846803,essv9846804,essv9846805,essv9846806,essv9846807,essv9846808,essv9846809,essv9846810,essv9846811,essv9846812,essv9846813,essv9846814,essv9846815,essv9846816,essv9846817,essv9846818,essv9846819,essv9846820,essv9846821,essv9846822,essv9846823,essv9846824,essv9846825,essv9846826,essv9846827,essv9846828,essv9846829,essv9846830,essv9846831,essv9846832,essv9846833,essv9846834,essv9846835,essv9846836,essv9846837,essv9846838,essv9846839,essv9846840,essv9846841,essv9846842,essv9846843,essv9846844,essv9846845,essv9846846,essv9846847,essv9846848,essv9846849,essv9846850,essv9846851,essv9846852,essv9846853,essv9846854,essv9846855,essv9846856,essv9846857,essv9846858,essv9846859,essv9846860,essv9846861,essv9846862,essv9846863,essv9846864,essv9846865,essv9846866,essv9846867,essv9846868,essv9846869,essv9846870,essv9846871,essv9846872,essv9846873,essv9846874,essv9846875,essv9846876,essv9846877,essv9846878,essv9846879,essv9846880,essv9846881,essv9846882,essv9846883,essv9846884,essv9846885,essv9846886,essv9846887,essv9846888,essv9846889,essv9846890,essv9846891,essv9846892,essv9846893,essv9846894,essv9846895,essv9846896,essv9846897,essv9846898,essv9846899,essv9846900,essv9846901,essv9846902,essv9846903,essv9846904,essv9846905,essv9846906,essv9846907,essv9846908,essv9846909,essv9846910,essv9846911,essv9846912,essv9846913,essv9846914,essv9846915,essv9846916,essv9846917,essv9846918,essv9846919,essv9846920,essv9846921,essv9846922,essv9846923,essv9846924,essv9846925,essv9846926,essv9846927,essv9846928,essv9846929,essv9846930,essv9846931,essv9846932,essv9846933,essv9846934,essv9846935,essv9846936,essv9846937,essv9846938,essv9846939,essv9846940,essv9846941,essv9846942,essv9846943,essv9846944,essv9846945,essv9846946,essv9846947,essv9846948,essv9846949,essv9846950,essv9846951,essv9846952,essv9846953,essv9846954,essv9846955,essv9846956,essv9846957,essv9846958,essv9846959,essv9846960,essv9846961,essv9846962,essv9846963,essv9846964,essv9846965,essv9846966,essv9846967,essv9846968,essv9846969,essv9846970,essv9846971,essv9846972,essv9846973,essv9846974,essv9846975,essv9846976,essv9846977,essv9846978,essv9846979,essv9846980,essv9846981,essv9846982,essv9846983,essv9846984,essv9846985,essv9846986,essv9846987,essv9846988,essv9846989,essv9846990,essv9846991,essv9846992,essv9846993,essv9846994,essv9846995,essv9846996,essv9846997,essv9846998,essv9846999,essv9847000,essv9847001,essv9847002,essv9847003,essv9847004,essv9847005,essv9847006,essv9847007,essv9847008,essv9847009,essv9847010,essv9847011,essv9847012,essv9847013,essv9847014,essv9847015,essv9847016,essv9847017,essv9847018,essv9847019,essv9847020,essv9847021,essv9847022,essv9847023,essv9847024,essv9847025,essv9847026,essv9847027,essv9847028,essv9847029,essv9847030,essv9847031,essv9847032,essv9847033,essv9847034,essv9847035,essv9847036,essv9847037,essv9847038,essv9847039,essv9847040,essv9847041,essv9847042,essv9847043,essv9847044,essv9847045,essv9847046,essv9847047,essv9847048,essv9847049,essv9847050,essv9847051,essv9847052,essv9847053,essv9847054,essv9847055,essv9847056,essv9847057,essv9847058,essv9847059,essv9847060,essv9847061,essv9847062,essv9847063,essv9847064,essv9847065,essv9847066,essv9847067,essv9847068,essv9847069,essv9847070,essv9847071,essv9847072,essv9847073,essv9847074,essv9847075,essv9847076,essv9847077,essv9847078,essv9847079,essv9847080,essv9847081,essv9847082,essv9847083,essv9847084,essv9847085,essv9847086,essv9847087,essv9847088,essv9847089,essv9847090,essv9847091,essv9847092,essv9847093,essv9847094,essv9847095,essv9847096,essv9847097,essv9847098,essv9847099,essv9847100,essv9847101,essv9847102,essv9847103,essv9847104,essv9847105,essv9847106,essv9847107,essv9847108,essv9847109,essv9847110,essv9847111,essv9847112,essv9847113,essv9847114,essv9847115,essv9847116,essv9847117,essv9847118,essv9847119,essv9847120,essv9847121,essv9847122,essv9847123,essv9847124,essv9847125,essv9847126,essv9847127,essv9847128,essv9847129,essv9847130,essv9847131,essv9847132,essv9847133,essv9847134,essv9847135,essv9847136,essv9847137,essv9847138,essv9847139,essv9847140,essv9847141,essv9847142,essv9847143,essv9847144,essv9847145,essv9847146,essv9847147,essv9847148,essv9847149,essv9847150,essv9847151,essv9847152,essv9847153,essv9847154,essv9847155,essv9847156,essv9847157,essv9847158,essv9847159,essv9847160,essv9847161,essv9847162,essv9847163,essv9847164,essv9847165,essv9847166,essv9847167,essv9847168,essv9847169,essv9847170,essv9847171,essv9847172,essv9847173,essv9847174,essv9847175,essv9847176,essv9847177,essv9847178,essv9847179,essv9847180,essv9847181,essv9847182,essv9847183,essv9847184,essv9847185,essv9847186,essv9847187,essv9847188,essv9847189,essv9847190,essv9847191,essv9847192,essv9847193,essv9847194,essv9847195,essv9847196,essv9847197,essv9847198,essv9847199,essv9847200,essv9847201,essv9847202,essv9847203,essv9847204,essv9847205,essv9847206,essv9847207,essv9847208,essv9847209,essv9847210,essv9847211,essv9847212,essv9847213,essv9847214,essv9847215,essv9847216,essv9847217,essv9847218,essv9847219,essv9847220,essv9847221,essv9847222,essv9847223,essv9847224,essv9847225,essv9847226,essv9847227,essv9847228,essv9847229,essv9847230,essv9847231,essv9847232,essv9847233,essv9847234,essv9847235,essv9847236,essv9847237,essv9847238,essv9847239,essv9847240,essv9847241,essv9847242,essv9847243,essv9847244,essv9847245,essv9847246,essv9847247,essv9847248,essv9847249,essv9847250,essv9847251,essv9847252,essv9847253,essv9847254,essv9847255,essv9847256,essv9847257,essv9847258,essv9847259,essv9847260,essv9847261,essv9847262,essv9847263,essv9847264,essv9847265,essv9847266,essv9847267,essv9847268,essv9847269,essv9847270,essv9847271,essv9847272,essv9847273,essv9847274,essv9847275,essv9847276,essv9847277,essv9847278,essv9847279,essv9847280,essv9847281,essv9847282,essv9847283,essv9847284,essv9847285,essv9847286,essv9847287,essv9847288,essv9847289,essv9847290,essv9847291,essv9847292,essv9847293,essv9847294,essv9847295,essv9847296,essv9847297,essv9847298,essv9847299,essv9847300,essv9847301,essv9847302,essv9847303,essv9847304,essv9847305,essv9847306,essv9847307,essv9847308,essv9847309,essv9847310,essv9847311,essv9847312,essv9847313,essv9847314,essv9847315,essv9847316,essv9847317,essv9847318,essv9847319,essv9847320,essv9847321,essv9847322,essv9847323,essv9847324,essv9847325,essv9847326,essv9847327,essv9847328,essv9847329,essv9847330,essv9847331,essv9847332,essv9847333,essv9847334,essv9847335,essv9847336,essv9847337,essv9847338,essv9847339,essv9847340,essv9847341,essv9847342,essv9847343,essv9847344,essv9847345,essv9847346,essv9847347,essv9847348,essv9847349,essv9847350,essv9847351,essv9847352,essv9847353,essv9847354,essv9847355,essv9847356,essv9847357,essv9847358,essv9847359,essv9847360,essv9847361,essv9847362,essv9847363,essv9847364,essv9847365,essv9847366,essv9847367,essv9847368,essv9847369,essv9847370,essv9847371,essv9847372,essv9847373,essv9847374,essv9847375,essv9847376,essv9847377,essv9847378,essv9847379,essv9847380,essv9847381,essv9847382,essv9847383,essv9847384,essv9847385,essv9847386,essv9847387,essv9847388,essv9847389,essv9847390,essv9847391,essv9847392,essv9847393,essv9847394,essv9847395,essv9847396,essv9847397,essv9847398,essv9847399,essv9847400,essv9847401,essv9847402,essv9847403,essv9847404,essv9847405,essv9847406,essv9847407,essv9847408,essv9847409,essv9847410,essv9847411,essv9847412,essv9847413,essv9847414,essv9847415,essv9847416,essv9847417,essv9847418,essv9847419,essv9847420,essv9847421,essv9847422,essv9847423,essv9847424,essv9847425,essv9847426,essv9847427,essv9847428,essv9847429,essv9847430,essv9847431,essv9847432,essv9847433,essv9847434,essv9847435,essv9847436,essv9847437,essv9847438,essv9847439,essv9847440,essv9847441,essv9847442,essv9847443,essv9847444,essv9847445,essv9847446,essv9847447,essv9847448,essv9847449,essv9847450,essv9847451,essv9847452,essv9847453,essv9847454,essv9847455,essv9847456,essv9847457,essv9847458,essv9847459,essv9847460,essv9847461,essv9847462,essv9847463,essv9847464,essv9847465,essv9847466,essv9847467,essv9847468,essv9847469,essv9847470,essv9847471,essv9847472,essv9847473,essv9847474,essv9847475,essv9847476,essv6800598,essv6954723,essv6766530,essv6769506,essv39096,essv74521,essv78242,essv83364;num_studies=9;studies=Wong2012b,Cooper2011,1000GenomesPhase1,Conrad2009,Bentley2008,Wang2008,Boomsma2014,Ahn2009,1000GenomesPhase3;num_platforms=6;platforms=Custom_Illumina_1.2M,Illumina_HiSeq,Illumina_II_IIX_HiSeq,NimbleGen42M,Illumina_GA,Multiple_NGS_Sequencing;num_algorithms=6;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA,PEM,RD+PEM;num_samples=782;samples=NA20826,NA18632,NA19670,NA19776,HG02667,NA19773,NA19678,NA20762,HG01624,sample_nssv709578,sample_nssv709579,NA12058,HG03376,HG00270,HG03687,HG02836,HG00276,HG00371,HG00372,HG01392,HG01395,HG03837,HG00376,HG00427,HG00422,HG00543,HG00542,HG00428,NA18550,NA18553,NA18552,NA19064,NA18557,NA19065,sample_nssv709611,sample_nssv709610,NA06989,HG02470,NA11829,NA06985,NA06986,HG01518,HG02379,HG02374,HG02375,HG02373,HG02371,HG01067,NA19074,NA19077,NA19070,HG01061,HG03846,HG01612,sample_nssv709580,SSM026,NA20846,NA20849,HG00641,HG04225,HG03792,HG02396,NA20761,HG02233,HG03016,HG01525,HG04222,HG00281,HG00284,HG02016,NA18593,HG02152,HG02019,HG02151,HG02156,HG03931,HG02154,HG02155,HG01603,HG01602,HG01168,HG01600,HG01606,HG02601,HG03762,HG01161,NA12891,NA21095,HG03960,HG01766,HG01767,HG01762,NA18648,HG04186,HG04185,HG04183,HG03077,HG03836,NA19324,HG03784,HG02128,HG02127,HG03745,HG00238,NA20765,HG02089,HG00589,HG02081,NA12748,HG00584,HG02084,HG02085,HG02086,HG02087,HG00740,HG03746,HG00463,HG00464,HG01695,HG01497,HG02181,NA18618,HG03895,NA19020,HG03897,HG03803,HG02334,NA19794,HG01944,HG00577,HG01342,HG03802,HG01341,HG00304,HG03805,NA18644,HG00309,HG03808,HG02236,HG02235,NA18608,HG01028,HG00512,HG03111,NA18603,HG01188,HG03963,YH,NA20586,NA20589,NA20588,HG03624,HG00129,HG03672,HG00127,HG03629,HG00123,HG01864,HG02427,HG01461,HG02425,NA18516,SSM095,SSM096,NA20534,NA20535,HG02778,NA20530,NA20531,NA20754,NA18641,NA21110,NA21115,HG02522,HG02648,HG01858,HG01682,NA18991,NA18990,NA18993,NA18992,NA18995,NA18994,NA18997,HG02645,HG03740,HG00634,HG00637,HG01686,HG04003,HG02166,HG02165,HG02164,HG02283,HG04001,HG01849,HG01848,HG00867,NA20901,HG02049,HG02731,HG01840,HG03607,HG02047,HG01845,HG01094,HG01846,HG00705,HG00704,HG00707,HG03611,HG02050,HG00702,NA19681,HG01334,NA19038,HG03615,NA19443,HG01593,HG02585,NA19660,NA19661,NA19663,HG01985,NA07346,HG03241,SSM065,HG03976,SSM066,SSM068,HG00349,HG02629,HG03691,HG03697,sample_essv9740091,HG03928,HG00267,NA18646,HG03515,HG00263,HG00261,HG00410,NA19204,NA12778,NA19201,HG00418,HG00554,NA12776,HG00556,HG00557,NA10851,NA06994,NA19012,NA18549,NA18546,NA18545,sample_nssv709602,sample_nssv709603,HG02462,HG01933,HG01932,NA19383,NA19382,NA19380,HG04173,HG04176,NA19764,NA19075,HG03265,NA21107,HG01503,HG01504,NA21105,NA19066,HG01072,HG01073,HG02082,HG03850,HG03998,HG01375,HG03594,NA20412,NA19089,HG00177,HG00675,HG00674,HG03603,NA07000,HG03780,HG03873,HG04107,HG03858,HG01200,HG01871,NA21109,HG02382,HG01805,HG01804,HG01807,HG01801,HG01802,NA18940,HG02380,NA18946,HG01615,HG01617,HG02774,HG01757,HG04195,HG00189,HG00188,HG02736,HG00183,HG00187,HG00185,NA18639,HG03947,HG00956,HG03945,HG02138,HG02878,HG03934,HG02136,HG00382,HG02130,HG02133,NA20897,NA18637,HG00598,HG04212,HG00452,HG01104,HG00595,HG00596,HG01107,HG00590,HG00693,HG00692,NA19129,NA19083,HG00698,NA19059,NA19058,NA19750,NA11894,NA11893,NA19056,NA19055,NA19054,HG02190,NA18616,NA18612,NA18613,HG00250,NA18597,NA18596,HG00259,HG00258,HG00525,HG00524,HG03950,HG02810,NA19338,NA18577,NA18576,NA18574,HG03857,NA18571,NA18570,NA18579,NA19904,HG04141,HG04140,NA19900,HG00130,HG03833,HG00137,NA19786,HG02355,HG02356,HG01577,HG00111,HG02450,HG02805,NA18507,NA18505,NA20502,NA20507,NA18986,NA18984,NA18985,NA18982,NA20769,NA18989,NA20291,NA07056,HG03771,HG03770,HG02536,HG00628,HG03172,HG00149,NA18957,HG00146,HG00145,HG00141,HG04090,HG04093,NA20340,HG04094,NA20344,HG01857,NA11933,HG01852,HG01850,HG02178,NA19171,NA19172,HG01859,HG02078,NA18934,HG01148,HG02073,HG02072,HG02076,HG01669,HG01668,NA18979,HG02952,HG00717,HG01784,HG01785,NA18973,NA18971,HG02620,NA18976,NA18974,HG00982,NA21104,NA20906,HG01105,NA19470,NA21108,HG04155,NA19719,HG03258,NA19652,HG02385,HG02384,HG02389,NA19716,NA19717,NA21087,HG00350,HG00351,HG00356,HG00357,HG04159,HG02017,NA19783,NA19782,HG00566,HG04200,HG00560,HG04202,HG03667,HG02040,HG03917,HG04209,HG03913,HG02691,HG02690,HG01847,NA12761,NA12763,NA19004,NA19005,NA19002,NA19003,HG01797,HG04061,sample_nssv709631,sample_nssv709630,HG01531,HG01530,HG02494,HG03228,HG02497,NA11843,HG02493,NA19399,HG01920,HG02490,HG00326,HG02253,HG00324,HG00323,NA12004,NA18954,HG02259,NA20541,NA20540,HG00329,NA20542,HG01047,HG01046,HG01049,NA19095,NA18623,NA18622,HG03867,HG03229,NA20862,NA20866,HG01977,NA11840,NA21119,NA12341,HG00663,HG00108,NA12348,HG02406,HG02407,HG01405,HG02402,NA19119,HG03488,HG02250,HG01813,HG01810,HG01817,HG02032,HG02661,HG01628,NA20818,NA20816,NA20812,NA20811,HG02186,HG02541,HG03727,HG03048,NA20339,NA21141,HG04062,NA19225,HG03385,HG01632,HG01869,HG03082,HG01867,HG01597,HG01865,HG01280,HG01862,HG00446,NA20882,HG01130,HG00448,HG01137,HG00689,HG03826,HG00257,NA19762,NA18629,HG01177,NA19041,HG03985,NA12044,HG03057,HG03432,SSM002,HG02185,HG00244,HG00245,HG00246,HG00368,HG00240,HG03941,NA18582,HG00360,HG00366,HG00365,NA12275,NA19347,NA18865,NA20905,NA12716,NA12272,HG00534,NA18747,NA18740,HG00533,HG00531,NA18564,NA18565,NA18561,HG03765,NA19913,HG04152,NA19917,HG04156,HG03823,NA20516,HG02360,HG02364,HG01566,NA20282,HG01259,NA19320,NA20778,NA20858,HG02657,NA20771,HG00653,HG01708,HG00650,HG00657,HG00656,HG00654,HG02501,HG03925,HG00097,HG00096,HG04211,HG04198,HG00150,HG03006,NA18645,HG04019,HG02060,HG02061,HG02144,NA20900,HG02140,HG02069,HG01676,HG01675,HG01673,HG01670,NA12889,HG01174,HG00844,HG01171,HG01170,HG01679,HG03716,HG03714,NA19463,HG03711,NA19461,HG01777,NA18961,HG01775,NA18963,NA18965,NA18966,HG02122,NA12282,NA12287,NA12286,HG02390,HG02391,HG02392,HG02394,NA19648,HG02397,HG02398,HG02399,NA19316,SSM064,NA11993,HG03478,HG03479,NA11995,HG04118,SSM041,SSM040,NA21098,NA12751,NA12750,HG02508,HG00478,HG04227,HG00472,HG00476,HG02885,HG03888,HG03645,HG03644,HG01874,HG01521,sample_nssv709621,sample_nssv709622,sample_nssv709623,HG01528,HG03237,HG00334,HG00335,NA12155,HG00337,HG03872,HG00331,HG00332,HG01699,SSM034,HG00339,HG01080,HG02870,NA18638,HG01872,HG00501,HG00500,NA18634,NA18635,NA19086,NA19087,NA19082,NA18633,NA18543,HG00110,SJK,HG00113,HG00118,HG03814,HG03684,HG04146,NA12414,HG02439,HG01414,HG02353,HG01413,NA20529,NA20528,NA20525,NA20524,HG02028,HG02020,NA21120,HG02025,HG02554,NA20808,HG02658,NA20804,HG01630,NA20807,NA20801,HG02558,NA19428,NA19429,HG00608,NA19741,NA12249,HG03757,HG03754,NA12872,NA12873,NA12874,NA12878,NA21135,NA19190,HG03971,HG02113,HG01323,HG02291,NA19023,HG02881,HG01125,HG01878,HG01088,NA19456,HG01085,NA21130,NA19455,HG01083,HG01082,NA18910,NA18917,HG01776,HG00731,NA19107,NA20894;num_samples_tested=5965;frequency=13.11%;num_unique_samples_tested=4930;nr_frequency=15.86%;PopulationSummary=European 196:Asian 389:Mexican 21:African 92:Admixed 0:MiddleEast 0:NativeAmerican 27:NorthAmerican 10:SouthAmerican 47:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7571996	7571996	.	.	.	ID=gssv959;Name=gssv959;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569911;inner_start=7570061;inner_end=7571688;outer_end=7571996;inner_rank=7;num_variants=1057;variants=nssv709578,nssv709579,nssv709580,essv4836092,nssv709602,nssv709603,essv72605,nssv709610,nssv709611,nssv709621,nssv709622,nssv709623,essv26356,nssv709630,nssv709631,essv9740091,essv41815,essv6707252,essv6773424,essv5397363,essv5399289,essv5404078,essv5412555,essv5420861,essv5421776,essv5428010,essv5429536,essv5430800,essv5431607,essv5432008,essv5433351,essv5433597,essv5440192,essv5445583,essv5446598,essv5450460,essv5461375,essv5465801,essv5479781,essv5482762,essv5489293,essv5497751,essv5499302,essv5500732,essv5503175,essv5505561,essv5506505,essv5507085,essv5511424,essv5522275,essv5536940,essv5537806,essv5542914,essv5552465,essv5556929,essv5559722,essv5559985,essv5568082,essv5576898,essv5589809,essv5596979,essv5597762,essv5598326,essv5602417,essv5605115,essv5609761,essv5612440,essv5618196,essv5620153,essv5621444,essv5621604,essv5621944,essv5622190,essv5630336,essv5631596,essv5636594,essv5646630,essv5647981,essv5648473,essv5658671,essv5675761,essv5686531,essv5687666,essv5691391,essv5692329,essv5703541,essv5708133,essv5717552,essv5727746,essv5732462,essv5744317,essv5749177,essv5754165,essv5766898,essv5771007,essv5771428,essv5774461,essv5778687,essv5781061,essv5790430,essv5793684,essv5796224,essv5798315,essv5799224,essv5800783,essv5806520,essv5815954,essv5818092,essv5819410,essv5823780,essv5825537,essv5826648,essv5829887,essv5830971,essv5833907,essv5841667,essv5852805,essv5853039,essv5858235,essv5863502,essv5863653,essv5875330,essv5876669,essv5883741,essv5887358,essv5888481,essv5891446,essv5896582,essv5898397,essv5898881,essv5898893,essv5902353,essv5902435,essv5908549,essv5909185,essv5913542,essv5921143,essv5922932,essv5924719,essv5927521,essv5927894,essv5928849,essv5931759,essv5942501,essv5950392,essv5957916,essv5961649,essv5966237,essv5971897,essv5973166,essv5978907,essv5979160,essv5981620,essv5998324,essv6004098,essv6007472,essv6009563,essv6013738,essv6014564,essv6015013,essv6016935,essv6018100,essv6027439,essv6030341,essv6039563,essv6041407,essv6044362,essv6046099,essv6049159,essv6053521,essv6057755,essv6061070,essv6063213,essv6068568,essv6069004,essv6069629,essv6075734,essv6081607,essv6083900,essv6085784,essv6086542,essv6090700,essv6099962,essv6100322,essv6109378,essv6118990,essv6119227,essv6123121,essv6127324,essv6133433,essv6134386,essv6135664,essv6146355,essv6148159,essv6149199,essv6160626,essv6160948,essv6167253,essv6169504,essv6171336,essv6189325,essv6193427,essv6193468,essv6199820,essv6202404,essv6204790,essv6207963,essv6214231,essv6216050,essv6228501,essv6231964,essv6233292,essv6233645,essv6242378,essv6246172,essv6253213,essv6253385,essv6260423,essv6266308,essv6271138,essv6278813,essv6281857,essv6286695,essv6287100,essv6288927,essv6290633,essv6291742,essv6292739,essv6294648,essv6295813,essv6298889,essv6301711,essv6303084,essv6303515,essv6303691,essv6308899,essv6310275,essv6315369,essv6317995,essv6325203,essv6325429,essv6332805,essv6354211,essv6354985,essv6363379,essv6363517,essv6364050,essv6366028,essv6366589,essv6367627,essv6372156,essv6376701,essv6377227,essv6385424,essv6387037,essv6392822,essv6399921,essv6413777,essv6418480,essv6418911,essv6419778,essv6424790,essv6431057,essv6436832,essv6438064,essv6438446,essv6442019,essv6442157,essv6445191,essv6445705,essv6447140,essv6449470,essv6453378,essv6458057,essv6458151,essv6460438,essv6460683,essv6464636,essv6465910,essv6471769,essv6481631,essv6483263,essv6491045,essv6495337,essv6496136,essv6497319,essv6506715,essv6506775,essv6514311,essv6515447,essv6519589,essv6527507,essv6528378,essv6535980,essv6536764,essv6538809,essv6538832,essv6542461,essv6542778,essv6543277,essv6544648,essv6544861,essv6548964,essv6561443,essv6564812,essv6572516,essv6575482,essv6577034,essv6578015,essv6581519,essv6595199,essv6597320,essv6780853,essv6885976,essv6883249,essv6682816,essv6703852,essv29674,essv9846746,essv9846747,essv9846748,essv9846749,essv9846750,essv9846751,essv9846752,essv9846753,essv9846754,essv9846755,essv9846756,essv9846757,essv9846758,essv9846759,essv9846760,essv9846761,essv9846762,essv9846763,essv9846764,essv9846765,essv9846766,essv9846767,essv9846768,essv9846769,essv9846770,essv9846771,essv9846772,essv9846773,essv9846774,essv9846775,essv9846776,essv9846777,essv9846778,essv9846779,essv9846780,essv9846781,essv9846782,essv9846783,essv9846784,essv9846785,essv9846786,essv9846787,essv9846788,essv9846789,essv9846790,essv9846791,essv9846792,essv9846793,essv9846794,essv9846795,essv9846796,essv9846797,essv9846798,essv9846799,essv9846800,essv9846801,essv9846802,essv9846803,essv9846804,essv9846805,essv9846806,essv9846807,essv9846808,essv9846809,essv9846810,essv9846811,essv9846812,essv9846813,essv9846814,essv9846815,essv9846816,essv9846817,essv9846818,essv9846819,essv9846820,essv9846821,essv9846822,essv9846823,essv9846824,essv9846825,essv9846826,essv9846827,essv9846828,essv9846829,essv9846830,essv9846831,essv9846832,essv9846833,essv9846834,essv9846835,essv9846836,essv9846837,essv9846838,essv9846839,essv9846840,essv9846841,essv9846842,essv9846843,essv9846844,essv9846845,essv9846846,essv9846847,essv9846848,essv9846849,essv9846850,essv9846851,essv9846852,essv9846853,essv9846854,essv9846855,essv9846856,essv9846857,essv9846858,essv9846859,essv9846860,essv9846861,essv9846862,essv9846863,essv9846864,essv9846865,essv9846866,essv9846867,essv9846868,essv9846869,essv9846870,essv9846871,essv9846872,essv9846873,essv9846874,essv9846875,essv9846876,essv9846877,essv9846878,essv9846879,essv9846880,essv9846881,essv9846882,essv9846883,essv9846884,essv9846885,essv9846886,essv9846887,essv9846888,essv9846889,essv9846890,essv9846891,essv9846892,essv9846893,essv9846894,essv9846895,essv9846896,essv9846897,essv9846898,essv9846899,essv9846900,essv9846901,essv9846902,essv9846903,essv9846904,essv9846905,essv9846906,essv9846907,essv9846908,essv9846909,essv9846910,essv9846911,essv9846912,essv9846913,essv9846914,essv9846915,essv9846916,essv9846917,essv9846918,essv9846919,essv9846920,essv9846921,essv9846922,essv9846923,essv9846924,essv9846925,essv9846926,essv9846927,essv9846928,essv9846929,essv9846930,essv9846931,essv9846932,essv9846933,essv9846934,essv9846935,essv9846936,essv9846937,essv9846938,essv9846939,essv9846940,essv9846941,essv9846942,essv9846943,essv9846944,essv9846945,essv9846946,essv9846947,essv9846948,essv9846949,essv9846950,essv9846951,essv9846952,essv9846953,essv9846954,essv9846955,essv9846956,essv9846957,essv9846958,essv9846959,essv9846960,essv9846961,essv9846962,essv9846963,essv9846964,essv9846965,essv9846966,essv9846967,essv9846968,essv9846969,essv9846970,essv9846971,essv9846972,essv9846973,essv9846974,essv9846975,essv9846976,essv9846977,essv9846978,essv9846979,essv9846980,essv9846981,essv9846982,essv9846983,essv9846984,essv9846985,essv9846986,essv9846987,essv9846988,essv9846989,essv9846990,essv9846991,essv9846992,essv9846993,essv9846994,essv9846995,essv9846996,essv9846997,essv9846998,essv9846999,essv9847000,essv9847001,essv9847002,essv9847003,essv9847004,essv9847005,essv9847006,essv9847007,essv9847008,essv9847009,essv9847010,essv9847011,essv9847012,essv9847013,essv9847014,essv9847015,essv9847016,essv9847017,essv9847018,essv9847019,essv9847020,essv9847021,essv9847022,essv9847023,essv9847024,essv9847025,essv9847026,essv9847027,essv9847028,essv9847029,essv9847030,essv9847031,essv9847032,essv9847033,essv9847034,essv9847035,essv9847036,essv9847037,essv9847038,essv9847039,essv9847040,essv9847041,essv9847042,essv9847043,essv9847044,essv9847045,essv9847046,essv9847047,essv9847048,essv9847049,essv9847050,essv9847051,essv9847052,essv9847053,essv9847054,essv9847055,essv9847056,essv9847057,essv9847058,essv9847059,essv9847060,essv9847061,essv9847062,essv9847063,essv9847064,essv9847065,essv9847066,essv9847067,essv9847068,essv9847069,essv9847070,essv9847071,essv9847072,essv9847073,essv9847074,essv9847075,essv9847076,essv9847077,essv9847078,essv9847079,essv9847080,essv9847081,essv9847082,essv9847083,essv9847084,essv9847085,essv9847086,essv9847087,essv9847088,essv9847089,essv9847090,essv9847091,essv9847092,essv9847093,essv9847094,essv9847095,essv9847096,essv9847097,essv9847098,essv9847099,essv9847100,essv9847101,essv9847102,essv9847103,essv9847104,essv9847105,essv9847106,essv9847107,essv9847108,essv9847109,essv9847110,essv9847111,essv9847112,essv9847113,essv9847114,essv9847115,essv9847116,essv9847117,essv9847118,essv9847119,essv9847120,essv9847121,essv9847122,essv9847123,essv9847124,essv9847125,essv9847126,essv9847127,essv9847128,essv9847129,essv9847130,essv9847131,essv9847132,essv9847133,essv9847134,essv9847135,essv9847136,essv9847137,essv9847138,essv9847139,essv9847140,essv9847141,essv9847142,essv9847143,essv9847144,essv9847145,essv9847146,essv9847147,essv9847148,essv9847149,essv9847150,essv9847151,essv9847152,essv9847153,essv9847154,essv9847155,essv9847156,essv9847157,essv9847158,essv9847159,essv9847160,essv9847161,essv9847162,essv9847163,essv9847164,essv9847165,essv9847166,essv9847167,essv9847168,essv9847169,essv9847170,essv9847171,essv9847172,essv9847173,essv9847174,essv9847175,essv9847176,essv9847177,essv9847178,essv9847179,essv9847180,essv9847181,essv9847182,essv9847183,essv9847184,essv9847185,essv9847186,essv9847187,essv9847188,essv9847189,essv9847190,essv9847191,essv9847192,essv9847193,essv9847194,essv9847195,essv9847196,essv9847197,essv9847198,essv9847199,essv9847200,essv9847201,essv9847202,essv9847203,essv9847204,essv9847205,essv9847206,essv9847207,essv9847208,essv9847209,essv9847210,essv9847211,essv9847212,essv9847213,essv9847214,essv9847215,essv9847216,essv9847217,essv9847218,essv9847219,essv9847220,essv9847221,essv9847222,essv9847223,essv9847224,essv9847225,essv9847226,essv9847227,essv9847228,essv9847229,essv9847230,essv9847231,essv9847232,essv9847233,essv9847234,essv9847235,essv9847236,essv9847237,essv9847238,essv9847239,essv9847240,essv9847241,essv9847242,essv9847243,essv9847244,essv9847245,essv9847246,essv9847247,essv9847248,essv9847249,essv9847250,essv9847251,essv9847252,essv9847253,essv9847254,essv9847255,essv9847256,essv9847257,essv9847258,essv9847259,essv9847260,essv9847261,essv9847262,essv9847263,essv9847264,essv9847265,essv9847266,essv9847267,essv9847268,essv9847269,essv9847270,essv9847271,essv9847272,essv9847273,essv9847274,essv9847275,essv9847276,essv9847277,essv9847278,essv9847279,essv9847280,essv9847281,essv9847282,essv9847283,essv9847284,essv9847285,essv9847286,essv9847287,essv9847288,essv9847289,essv9847290,essv9847291,essv9847292,essv9847293,essv9847294,essv9847295,essv9847296,essv9847297,essv9847298,essv9847299,essv9847300,essv9847301,essv9847302,essv9847303,essv9847304,essv9847305,essv9847306,essv9847307,essv9847308,essv9847309,essv9847310,essv9847311,essv9847312,essv9847313,essv9847314,essv9847315,essv9847316,essv9847317,essv9847318,essv9847319,essv9847320,essv9847321,essv9847322,essv9847323,essv9847324,essv9847325,essv9847326,essv9847327,essv9847328,essv9847329,essv9847330,essv9847331,essv9847332,essv9847333,essv9847334,essv9847335,essv9847336,essv9847337,essv9847338,essv9847339,essv9847340,essv9847341,essv9847342,essv9847343,essv9847344,essv9847345,essv9847346,essv9847347,essv9847348,essv9847349,essv9847350,essv9847351,essv9847352,essv9847353,essv9847354,essv9847355,essv9847356,essv9847357,essv9847358,essv9847359,essv9847360,essv9847361,essv9847362,essv9847363,essv9847364,essv9847365,essv9847366,essv9847367,essv9847368,essv9847369,essv9847370,essv9847371,essv9847372,essv9847373,essv9847374,essv9847375,essv9847376,essv9847377,essv9847378,essv9847379,essv9847380,essv9847381,essv9847382,essv9847383,essv9847384,essv9847385,essv9847386,essv9847387,essv9847388,essv9847389,essv9847390,essv9847391,essv9847392,essv9847393,essv9847394,essv9847395,essv9847396,essv9847397,essv9847398,essv9847399,essv9847400,essv9847401,essv9847402,essv9847403,essv9847404,essv9847405,essv9847406,essv9847407,essv9847408,essv9847409,essv9847410,essv9847411,essv9847412,essv9847413,essv9847414,essv9847415,essv9847416,essv9847417,essv9847418,essv9847419,essv9847420,essv9847421,essv9847422,essv9847423,essv9847424,essv9847425,essv9847426,essv9847427,essv9847428,essv9847429,essv9847430,essv9847431,essv9847432,essv9847433,essv9847434,essv9847435,essv9847436,essv9847437,essv9847438,essv9847439,essv9847440,essv9847441,essv9847442,essv9847443,essv9847444,essv9847445,essv9847446,essv9847447,essv9847448,essv9847449,essv9847450,essv9847451,essv9847452,essv9847453,essv9847454,essv9847455,essv9847456,essv9847457,essv9847458,essv9847459,essv9847460,essv9847461,essv9847462,essv9847463,essv9847464,essv9847465,essv9847466,essv9847467,essv9847468,essv9847469,essv9847470,essv9847471,essv9847472,essv9847473,essv9847474,essv9847475,essv9847476,essv6800598,essv6954723,essv6766530,essv6769506,essv39096,essv74521,essv78242,essv83364;num_studies=9;studies=Wong2012b,Cooper2011,1000GenomesPhase1,Conrad2009,Bentley2008,Wang2008,Boomsma2014,Ahn2009,1000GenomesPhase3;num_platforms=6;platforms=Custom_Illumina_1.2M,Illumina_HiSeq,Illumina_II_IIX_HiSeq,NimbleGen42M,Illumina_GA,Multiple_NGS_Sequencing;num_algorithms=6;algorithms=PEM+ReadDepth+SplitRead,Custom_HMM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq,GADA,PEM,RD+PEM;num_samples=782;samples=NA20826,NA18632,NA19670,NA19776,HG02667,NA19773,NA19678,NA20762,HG01624,sample_nssv709578,sample_nssv709579,NA12058,HG03376,HG00270,HG03687,HG02836,HG00276,HG00371,HG00372,HG01392,HG01395,HG03837,HG00376,HG00427,HG00422,HG00543,HG00542,HG00428,NA18550,NA18553,NA18552,NA19064,NA18557,NA19065,sample_nssv709611,sample_nssv709610,NA06989,HG02470,NA11829,NA06985,NA06986,HG01518,HG02379,HG02374,HG02375,HG02373,HG02371,HG01067,NA19074,NA19077,NA19070,HG01061,HG03846,HG01612,sample_nssv709580,SSM026,NA20846,NA20849,HG00641,HG04225,HG03792,HG02396,NA20761,HG02233,HG03016,HG01525,HG04222,HG00281,HG00284,HG02016,NA18593,HG02152,HG02019,HG02151,HG02156,HG03931,HG02154,HG02155,HG01603,HG01602,HG01168,HG01600,HG01606,HG02601,HG03762,HG01161,NA12891,NA21095,HG03960,HG01766,HG01767,HG01762,NA18648,HG04186,HG04185,HG04183,HG03077,HG03836,NA19324,HG03784,HG02128,HG02127,HG03745,HG00238,NA20765,HG02089,HG00589,HG02081,NA12748,HG00584,HG02084,HG02085,HG02086,HG02087,HG00740,HG03746,HG00463,HG00464,HG01695,HG01497,HG02181,NA18618,HG03895,NA19020,HG03897,HG03803,HG02334,NA19794,HG01944,HG00577,HG01342,HG03802,HG01341,HG00304,HG03805,NA18644,HG00309,HG03808,HG02236,HG02235,NA18608,HG01028,HG00512,HG03111,NA18603,HG01188,HG03963,YH,NA20586,NA20589,NA20588,HG03624,HG00129,HG03672,HG00127,HG03629,HG00123,HG01864,HG02427,HG01461,HG02425,NA18516,SSM095,SSM096,NA20534,NA20535,HG02778,NA20530,NA20531,NA20754,NA18641,NA21110,NA21115,HG02522,HG02648,HG01858,HG01682,NA18991,NA18990,NA18993,NA18992,NA18995,NA18994,NA18997,HG02645,HG03740,HG00634,HG00637,HG01686,HG04003,HG02166,HG02165,HG02164,HG02283,HG04001,HG01849,HG01848,HG00867,NA20901,HG02049,HG02731,HG01840,HG03607,HG02047,HG01845,HG01094,HG01846,HG00705,HG00704,HG00707,HG03611,HG02050,HG00702,NA19681,HG01334,NA19038,HG03615,NA19443,HG01593,HG02585,NA19660,NA19661,NA19663,HG01985,NA07346,HG03241,SSM065,HG03976,SSM066,SSM068,HG00349,HG02629,HG03691,HG03697,sample_essv9740091,HG03928,HG00267,NA18646,HG03515,HG00263,HG00261,HG00410,NA19204,NA12778,NA19201,HG00418,HG00554,NA12776,HG00556,HG00557,NA10851,NA06994,NA19012,NA18549,NA18546,NA18545,sample_nssv709602,sample_nssv709603,HG02462,HG01933,HG01932,NA19383,NA19382,NA19380,HG04173,HG04176,NA19764,NA19075,HG03265,NA21107,HG01503,HG01504,NA21105,NA19066,HG01072,HG01073,HG02082,HG03850,HG03998,HG01375,HG03594,NA20412,NA19089,HG00177,HG00675,HG00674,HG03603,NA07000,HG03780,HG03873,HG04107,HG03858,HG01200,HG01871,NA21109,HG02382,HG01805,HG01804,HG01807,HG01801,HG01802,NA18940,HG02380,NA18946,HG01615,HG01617,HG02774,HG01757,HG04195,HG00189,HG00188,HG02736,HG00183,HG00187,HG00185,NA18639,HG03947,HG00956,HG03945,HG02138,HG02878,HG03934,HG02136,HG00382,HG02130,HG02133,NA20897,NA18637,HG00598,HG04212,HG00452,HG01104,HG00595,HG00596,HG01107,HG00590,HG00693,HG00692,NA19129,NA19083,HG00698,NA19059,NA19058,NA19750,NA11894,NA11893,NA19056,NA19055,NA19054,HG02190,NA18616,NA18612,NA18613,HG00250,NA18597,NA18596,HG00259,HG00258,HG00525,HG00524,HG03950,HG02810,NA19338,NA18577,NA18576,NA18574,HG03857,NA18571,NA18570,NA18579,NA19904,HG04141,HG04140,NA19900,HG00130,HG03833,HG00137,NA19786,HG02355,HG02356,HG01577,HG00111,HG02450,HG02805,NA18507,NA18505,NA20502,NA20507,NA18986,NA18984,NA18985,NA18982,NA20769,NA18989,NA20291,NA07056,HG03771,HG03770,HG02536,HG00628,HG03172,HG00149,NA18957,HG00146,HG00145,HG00141,HG04090,HG04093,NA20340,HG04094,NA20344,HG01857,NA11933,HG01852,HG01850,HG02178,NA19171,NA19172,HG01859,HG02078,NA18934,HG01148,HG02073,HG02072,HG02076,HG01669,HG01668,NA18979,HG02952,HG00717,HG01784,HG01785,NA18973,NA18971,HG02620,NA18976,NA18974,HG00982,NA21104,NA20906,HG01105,NA19470,NA21108,HG04155,NA19719,HG03258,NA19652,HG02385,HG02384,HG02389,NA19716,NA19717,NA21087,HG00350,HG00351,HG00356,HG00357,HG04159,HG02017,NA19783,NA19782,HG00566,HG04200,HG00560,HG04202,HG03667,HG02040,HG03917,HG04209,HG03913,HG02691,HG02690,HG01847,NA12761,NA12763,NA19004,NA19005,NA19002,NA19003,HG01797,HG04061,sample_nssv709631,sample_nssv709630,HG01531,HG01530,HG02494,HG03228,HG02497,NA11843,HG02493,NA19399,HG01920,HG02490,HG00326,HG02253,HG00324,HG00323,NA12004,NA18954,HG02259,NA20541,NA20540,HG00329,NA20542,HG01047,HG01046,HG01049,NA19095,NA18623,NA18622,HG03867,HG03229,NA20862,NA20866,HG01977,NA11840,NA21119,NA12341,HG00663,HG00108,NA12348,HG02406,HG02407,HG01405,HG02402,NA19119,HG03488,HG02250,HG01813,HG01810,HG01817,HG02032,HG02661,HG01628,NA20818,NA20816,NA20812,NA20811,HG02186,HG02541,HG03727,HG03048,NA20339,NA21141,HG04062,NA19225,HG03385,HG01632,HG01869,HG03082,HG01867,HG01597,HG01865,HG01280,HG01862,HG00446,NA20882,HG01130,HG00448,HG01137,HG00689,HG03826,HG00257,NA19762,NA18629,HG01177,NA19041,HG03985,NA12044,HG03057,HG03432,SSM002,HG02185,HG00244,HG00245,HG00246,HG00368,HG00240,HG03941,NA18582,HG00360,HG00366,HG00365,NA12275,NA19347,NA18865,NA20905,NA12716,NA12272,HG00534,NA18747,NA18740,HG00533,HG00531,NA18564,NA18565,NA18561,HG03765,NA19913,HG04152,NA19917,HG04156,HG03823,NA20516,HG02360,HG02364,HG01566,NA20282,HG01259,NA19320,NA20778,NA20858,HG02657,NA20771,HG00653,HG01708,HG00650,HG00657,HG00656,HG00654,HG02501,HG03925,HG00097,HG00096,HG04211,HG04198,HG00150,HG03006,NA18645,HG04019,HG02060,HG02061,HG02144,NA20900,HG02140,HG02069,HG01676,HG01675,HG01673,HG01670,NA12889,HG01174,HG00844,HG01171,HG01170,HG01679,HG03716,HG03714,NA19463,HG03711,NA19461,HG01777,NA18961,HG01775,NA18963,NA18965,NA18966,HG02122,NA12282,NA12287,NA12286,HG02390,HG02391,HG02392,HG02394,NA19648,HG02397,HG02398,HG02399,NA19316,SSM064,NA11993,HG03478,HG03479,NA11995,HG04118,SSM041,SSM040,NA21098,NA12751,NA12750,HG02508,HG00478,HG04227,HG00472,HG00476,HG02885,HG03888,HG03645,HG03644,HG01874,HG01521,sample_nssv709621,sample_nssv709622,sample_nssv709623,HG01528,HG03237,HG00334,HG00335,NA12155,HG00337,HG03872,HG00331,HG00332,HG01699,SSM034,HG00339,HG01080,HG02870,NA18638,HG01872,HG00501,HG00500,NA18634,NA18635,NA19086,NA19087,NA19082,NA18633,NA18543,HG00110,SJK,HG00113,HG00118,HG03814,HG03684,HG04146,NA12414,HG02439,HG01414,HG02353,HG01413,NA20529,NA20528,NA20525,NA20524,HG02028,HG02020,NA21120,HG02025,HG02554,NA20808,HG02658,NA20804,HG01630,NA20807,NA20801,HG02558,NA19428,NA19429,HG00608,NA19741,NA12249,HG03757,HG03754,NA12872,NA12873,NA12874,NA12878,NA21135,NA19190,HG03971,HG02113,HG01323,HG02291,NA19023,HG02881,HG01125,HG01878,HG01088,NA19456,HG01085,NA21130,NA19455,HG01083,HG01082,NA18910,NA18917,HG01776,HG00731,NA19107,NA20894;num_samples_tested=5965;frequency=13.11%;num_unique_samples_tested=4930;nr_frequency=15.86%;PopulationSummary=European 196:Asian 389:Mexican 21:African 92:Admixed 0:MiddleEast 0:NativeAmerican 27:NorthAmerican 10:SouthAmerican 47:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7569818	7569818	.	.	.	ID=gssv960;Name=gssv960;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569818;inner_start=7570088;inner_end=7571488;outer_end=7571517;inner_rank=7;num_variants=160;variants=nssv1419290,nssv709467,nssv709468,nssv709472,nssv709473,essv6669121,essv6710570,essv6738799,essv6888995,essv6753484,essv6910029,essv6718156,essv6874691,essv6789136,essv6895838,essv6853217,essv6821168,essv6776925,essv6816571,essv6933294,essv6950106,essv6686146,essv6744926,essv6961537,essv6925678,essv6832586,essv6921703,essv6784983,essv6898602,nssv3004927,essv6748176,essv6917411,essv6692747,essv6668925,nssv709492,nssv709493,nssv709494,nssv709495,nssv709496,nssv709497,nssv709498,nssv709499,nssv709500,nssv709501,nssv709502,nssv709503,nssv709504,nssv709505,nssv709506,nssv709507,nssv709508,nssv709509,nssv709510,nssv709511,nssv709512,nssv709513,nssv709514,nssv709515,nssv709516,nssv709517,nssv709518,nssv709519,nssv709520,nssv709521,nssv709522,nssv709523,nssv709524,nssv709525,nssv709526,nssv709527,nssv709528,nssv709529,nssv709530,nssv709531,nssv709532,nssv709533,nssv709534,nssv709535,nssv709536,nssv709537,nssv709538,nssv709539,nssv709540,nssv709541,nssv709542,nssv709543,nssv709544,nssv709545,nssv709546,nssv709547,nssv709548,nssv709549,nssv709550,nssv709551,nssv709552,nssv709553,nssv709554,nssv709555,nssv709556,nssv709557,nssv709558,nssv709559,nssv709560,nssv709561,nssv709562,nssv709563,nssv709564,nssv709565,nssv709566,nssv709567,nssv709568,nssv709569,nssv709570,nssv709571,nssv709572,nssv709573,nssv709574,nssv709575,nssv709576,nssv709577,essv6675190,essv44968,essv66549,essv6902518,nssv709471,essv6804394,essv51190,essv59985,essv63297,essv71129,essv74139,essv75948,essv50002,essv6916573,essv6972318,essv6759029,nssv709484,nssv709485,nssv709486,nssv709487,nssv709488,nssv709489,nssv709490,nssv709491,nssv709470,nssv709591,nssv709592,nssv709593,nssv709594,nssv709595,nssv709596,nssv709597,nssv709598,nssv709599,nssv709600,nssv709601,essv55223,essv52383,nssv1440797,nssv709483;num_studies=6;studies=Kim2009,Wong2012b,Cooper2011,Park2010,Conrad2009,Dogan2014;num_platforms=5;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq,Agilent24M;num_algorithms=5;algorithms=Nexus,PEM,Custom_HMM,GADA,ADM2;num_samples=160;samples=SSM067,NA12828,sample_nssv709471,sample_nssv709470,sample_nssv709473,sample_nssv709472,sample_nssv709570,sample_nssv709571,SSM070,sample_nssv709573,sample_nssv709574,sample_nssv709575,sample_nssv709576,sample_nssv709577,SSM078,SSM079,NA18517,NA11931,sample_nssv709468,sample_nssv709467,sample_nssv709505,sample_nssv709504,sample_nssv709507,sample_nssv709506,sample_nssv709501,sample_nssv709500,sample_nssv709503,sample_nssv709502,SSM069,sample_nssv709509,sample_nssv709508,SSM042,sample_nssv709572,SSM100,sample_nssv709593,SSM027,SSM074,sample_nssv709600,sample_nssv709601,sample_nssv709516,sample_nssv709517,sample_nssv709514,sample_nssv709515,SSM058,sample_nssv709513,sample_nssv709510,sample_nssv709511,SSM055,SSM052,sample_nssv709519,NA18969,sample_nssv709483,sample_nssv709598,sample_nssv709599,sample_nssv709596,sample_nssv709597,sample_nssv709594,sample_nssv709595,sample_nssv709592,NA15510,sample_nssv709591,sample_nssv709488,sample_nssv709489,sample_nssv709529,sample_nssv709528,sample_nssv709523,BILGI_BIOE,sample_nssv709521,sample_nssv709520,sample_nssv709527,sample_nssv709526,sample_nssv709525,sample_nssv709524,NA12006,NA19099,NA18523,sample_nssv709491,sample_nssv709490,sample_nssv709538,sample_nssv709539,sample_nssv709522,sample_nssv709534,sample_nssv709535,sample_nssv709536,sample_nssv709537,sample_nssv709530,sample_nssv709531,sample_nssv709532,sample_nssv709533,NA12156,SSM037,SSM035,SSM032,SSM031,SSM044,sample_nssv709550,sample_nssv709549,sample_nssv709548,sample_nssv709551,sample_nssv709541,sample_nssv709540,sample_nssv709543,sample_nssv709542,sample_nssv709545,sample_nssv709544,sample_nssv709547,sample_nssv709546,SSM029,AK1,SSM021,sample_nssv709512,sample_nssv709493,sample_nssv709492,sample_nssv709558,sample_nssv709559,sample_nssv709497,sample_nssv709496,sample_nssv709495,sample_nssv709494,sample_nssv709552,sample_nssv709553,sample_nssv709499,sample_nssv709498,sample_nssv709556,sample_nssv709557,sample_nssv709554,sample_nssv709555,NA12489,SSM018,SSM019,SSM013,SSM015,SSM017,SSM092,sample_nssv709518,SSM097,SSM099,sample_nssv709484,sample_nssv709485,sample_nssv709486,sample_nssv709487,sample_nssv709569,sample_nssv709568,sample_nssv709567,sample_nssv709566,sample_nssv709565,sample_nssv709564,sample_nssv709563,sample_nssv709562,sample_nssv709561,sample_nssv709560,SSM005,SSM004,SSM003,SSM008,SSM061,NA12414,NA18916,SSM087,SSM082;num_samples_tested=1668;frequency=9.59%;num_unique_samples_tested=1668;nr_frequency=9.59%;PopulationSummary=European 118:Asian 36:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	7570088	7571488	.	.	.	ID=gssv960;Name=gssv960;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569818;inner_start=7570088;inner_end=7571488;outer_end=7571517;inner_rank=7;num_variants=160;variants=nssv1419290,nssv709467,nssv709468,nssv709472,nssv709473,essv6669121,essv6710570,essv6738799,essv6888995,essv6753484,essv6910029,essv6718156,essv6874691,essv6789136,essv6895838,essv6853217,essv6821168,essv6776925,essv6816571,essv6933294,essv6950106,essv6686146,essv6744926,essv6961537,essv6925678,essv6832586,essv6921703,essv6784983,essv6898602,nssv3004927,essv6748176,essv6917411,essv6692747,essv6668925,nssv709492,nssv709493,nssv709494,nssv709495,nssv709496,nssv709497,nssv709498,nssv709499,nssv709500,nssv709501,nssv709502,nssv709503,nssv709504,nssv709505,nssv709506,nssv709507,nssv709508,nssv709509,nssv709510,nssv709511,nssv709512,nssv709513,nssv709514,nssv709515,nssv709516,nssv709517,nssv709518,nssv709519,nssv709520,nssv709521,nssv709522,nssv709523,nssv709524,nssv709525,nssv709526,nssv709527,nssv709528,nssv709529,nssv709530,nssv709531,nssv709532,nssv709533,nssv709534,nssv709535,nssv709536,nssv709537,nssv709538,nssv709539,nssv709540,nssv709541,nssv709542,nssv709543,nssv709544,nssv709545,nssv709546,nssv709547,nssv709548,nssv709549,nssv709550,nssv709551,nssv709552,nssv709553,nssv709554,nssv709555,nssv709556,nssv709557,nssv709558,nssv709559,nssv709560,nssv709561,nssv709562,nssv709563,nssv709564,nssv709565,nssv709566,nssv709567,nssv709568,nssv709569,nssv709570,nssv709571,nssv709572,nssv709573,nssv709574,nssv709575,nssv709576,nssv709577,essv6675190,essv44968,essv66549,essv6902518,nssv709471,essv6804394,essv51190,essv59985,essv63297,essv71129,essv74139,essv75948,essv50002,essv6916573,essv6972318,essv6759029,nssv709484,nssv709485,nssv709486,nssv709487,nssv709488,nssv709489,nssv709490,nssv709491,nssv709470,nssv709591,nssv709592,nssv709593,nssv709594,nssv709595,nssv709596,nssv709597,nssv709598,nssv709599,nssv709600,nssv709601,essv55223,essv52383,nssv1440797,nssv709483;num_studies=6;studies=Kim2009,Wong2012b,Cooper2011,Park2010,Conrad2009,Dogan2014;num_platforms=5;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq,Agilent24M;num_algorithms=5;algorithms=Nexus,PEM,Custom_HMM,GADA,ADM2;num_samples=160;samples=SSM067,NA12828,sample_nssv709471,sample_nssv709470,sample_nssv709473,sample_nssv709472,sample_nssv709570,sample_nssv709571,SSM070,sample_nssv709573,sample_nssv709574,sample_nssv709575,sample_nssv709576,sample_nssv709577,SSM078,SSM079,NA18517,NA11931,sample_nssv709468,sample_nssv709467,sample_nssv709505,sample_nssv709504,sample_nssv709507,sample_nssv709506,sample_nssv709501,sample_nssv709500,sample_nssv709503,sample_nssv709502,SSM069,sample_nssv709509,sample_nssv709508,SSM042,sample_nssv709572,SSM100,sample_nssv709593,SSM027,SSM074,sample_nssv709600,sample_nssv709601,sample_nssv709516,sample_nssv709517,sample_nssv709514,sample_nssv709515,SSM058,sample_nssv709513,sample_nssv709510,sample_nssv709511,SSM055,SSM052,sample_nssv709519,NA18969,sample_nssv709483,sample_nssv709598,sample_nssv709599,sample_nssv709596,sample_nssv709597,sample_nssv709594,sample_nssv709595,sample_nssv709592,NA15510,sample_nssv709591,sample_nssv709488,sample_nssv709489,sample_nssv709529,sample_nssv709528,sample_nssv709523,BILGI_BIOE,sample_nssv709521,sample_nssv709520,sample_nssv709527,sample_nssv709526,sample_nssv709525,sample_nssv709524,NA12006,NA19099,NA18523,sample_nssv709491,sample_nssv709490,sample_nssv709538,sample_nssv709539,sample_nssv709522,sample_nssv709534,sample_nssv709535,sample_nssv709536,sample_nssv709537,sample_nssv709530,sample_nssv709531,sample_nssv709532,sample_nssv709533,NA12156,SSM037,SSM035,SSM032,SSM031,SSM044,sample_nssv709550,sample_nssv709549,sample_nssv709548,sample_nssv709551,sample_nssv709541,sample_nssv709540,sample_nssv709543,sample_nssv709542,sample_nssv709545,sample_nssv709544,sample_nssv709547,sample_nssv709546,SSM029,AK1,SSM021,sample_nssv709512,sample_nssv709493,sample_nssv709492,sample_nssv709558,sample_nssv709559,sample_nssv709497,sample_nssv709496,sample_nssv709495,sample_nssv709494,sample_nssv709552,sample_nssv709553,sample_nssv709499,sample_nssv709498,sample_nssv709556,sample_nssv709557,sample_nssv709554,sample_nssv709555,NA12489,SSM018,SSM019,SSM013,SSM015,SSM017,SSM092,sample_nssv709518,SSM097,SSM099,sample_nssv709484,sample_nssv709485,sample_nssv709486,sample_nssv709487,sample_nssv709569,sample_nssv709568,sample_nssv709567,sample_nssv709566,sample_nssv709565,sample_nssv709564,sample_nssv709563,sample_nssv709562,sample_nssv709561,sample_nssv709560,SSM005,SSM004,SSM003,SSM008,SSM061,NA12414,NA18916,SSM087,SSM082;num_samples_tested=1668;frequency=9.59%;num_unique_samples_tested=1668;nr_frequency=9.59%;PopulationSummary=European 118:Asian 36:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	7571517	7571517	.	.	.	ID=gssv960;Name=gssv960;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7569818;inner_start=7570088;inner_end=7571488;outer_end=7571517;inner_rank=7;num_variants=160;variants=nssv1419290,nssv709467,nssv709468,nssv709472,nssv709473,essv6669121,essv6710570,essv6738799,essv6888995,essv6753484,essv6910029,essv6718156,essv6874691,essv6789136,essv6895838,essv6853217,essv6821168,essv6776925,essv6816571,essv6933294,essv6950106,essv6686146,essv6744926,essv6961537,essv6925678,essv6832586,essv6921703,essv6784983,essv6898602,nssv3004927,essv6748176,essv6917411,essv6692747,essv6668925,nssv709492,nssv709493,nssv709494,nssv709495,nssv709496,nssv709497,nssv709498,nssv709499,nssv709500,nssv709501,nssv709502,nssv709503,nssv709504,nssv709505,nssv709506,nssv709507,nssv709508,nssv709509,nssv709510,nssv709511,nssv709512,nssv709513,nssv709514,nssv709515,nssv709516,nssv709517,nssv709518,nssv709519,nssv709520,nssv709521,nssv709522,nssv709523,nssv709524,nssv709525,nssv709526,nssv709527,nssv709528,nssv709529,nssv709530,nssv709531,nssv709532,nssv709533,nssv709534,nssv709535,nssv709536,nssv709537,nssv709538,nssv709539,nssv709540,nssv709541,nssv709542,nssv709543,nssv709544,nssv709545,nssv709546,nssv709547,nssv709548,nssv709549,nssv709550,nssv709551,nssv709552,nssv709553,nssv709554,nssv709555,nssv709556,nssv709557,nssv709558,nssv709559,nssv709560,nssv709561,nssv709562,nssv709563,nssv709564,nssv709565,nssv709566,nssv709567,nssv709568,nssv709569,nssv709570,nssv709571,nssv709572,nssv709573,nssv709574,nssv709575,nssv709576,nssv709577,essv6675190,essv44968,essv66549,essv6902518,nssv709471,essv6804394,essv51190,essv59985,essv63297,essv71129,essv74139,essv75948,essv50002,essv6916573,essv6972318,essv6759029,nssv709484,nssv709485,nssv709486,nssv709487,nssv709488,nssv709489,nssv709490,nssv709491,nssv709470,nssv709591,nssv709592,nssv709593,nssv709594,nssv709595,nssv709596,nssv709597,nssv709598,nssv709599,nssv709600,nssv709601,essv55223,essv52383,nssv1440797,nssv709483;num_studies=6;studies=Kim2009,Wong2012b,Cooper2011,Park2010,Conrad2009,Dogan2014;num_platforms=5;platforms=Illumina_GA,NimbleGen42M,Custom_Illumina_1.2M,Illumina_HiSeq,Agilent24M;num_algorithms=5;algorithms=Nexus,PEM,Custom_HMM,GADA,ADM2;num_samples=160;samples=SSM067,NA12828,sample_nssv709471,sample_nssv709470,sample_nssv709473,sample_nssv709472,sample_nssv709570,sample_nssv709571,SSM070,sample_nssv709573,sample_nssv709574,sample_nssv709575,sample_nssv709576,sample_nssv709577,SSM078,SSM079,NA18517,NA11931,sample_nssv709468,sample_nssv709467,sample_nssv709505,sample_nssv709504,sample_nssv709507,sample_nssv709506,sample_nssv709501,sample_nssv709500,sample_nssv709503,sample_nssv709502,SSM069,sample_nssv709509,sample_nssv709508,SSM042,sample_nssv709572,SSM100,sample_nssv709593,SSM027,SSM074,sample_nssv709600,sample_nssv709601,sample_nssv709516,sample_nssv709517,sample_nssv709514,sample_nssv709515,SSM058,sample_nssv709513,sample_nssv709510,sample_nssv709511,SSM055,SSM052,sample_nssv709519,NA18969,sample_nssv709483,sample_nssv709598,sample_nssv709599,sample_nssv709596,sample_nssv709597,sample_nssv709594,sample_nssv709595,sample_nssv709592,NA15510,sample_nssv709591,sample_nssv709488,sample_nssv709489,sample_nssv709529,sample_nssv709528,sample_nssv709523,BILGI_BIOE,sample_nssv709521,sample_nssv709520,sample_nssv709527,sample_nssv709526,sample_nssv709525,sample_nssv709524,NA12006,NA19099,NA18523,sample_nssv709491,sample_nssv709490,sample_nssv709538,sample_nssv709539,sample_nssv709522,sample_nssv709534,sample_nssv709535,sample_nssv709536,sample_nssv709537,sample_nssv709530,sample_nssv709531,sample_nssv709532,sample_nssv709533,NA12156,SSM037,SSM035,SSM032,SSM031,SSM044,sample_nssv709550,sample_nssv709549,sample_nssv709548,sample_nssv709551,sample_nssv709541,sample_nssv709540,sample_nssv709543,sample_nssv709542,sample_nssv709545,sample_nssv709544,sample_nssv709547,sample_nssv709546,SSM029,AK1,SSM021,sample_nssv709512,sample_nssv709493,sample_nssv709492,sample_nssv709558,sample_nssv709559,sample_nssv709497,sample_nssv709496,sample_nssv709495,sample_nssv709494,sample_nssv709552,sample_nssv709553,sample_nssv709499,sample_nssv709498,sample_nssv709556,sample_nssv709557,sample_nssv709554,sample_nssv709555,NA12489,SSM018,SSM019,SSM013,SSM015,SSM017,SSM092,sample_nssv709518,SSM097,SSM099,sample_nssv709484,sample_nssv709485,sample_nssv709486,sample_nssv709487,sample_nssv709569,sample_nssv709568,sample_nssv709567,sample_nssv709566,sample_nssv709565,sample_nssv709564,sample_nssv709563,sample_nssv709562,sample_nssv709561,sample_nssv709560,SSM005,SSM004,SSM003,SSM008,SSM061,NA12414,NA18916,SSM087,SSM082;num_samples_tested=1668;frequency=9.59%;num_unique_samples_tested=1668;nr_frequency=9.59%;PopulationSummary=European 118:Asian 36:Mexican 0:African 4:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	7570218	7570218	.	.	.	ID=gssv963;Name=gssv963;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7570218;inner_start=7570322;inner_end=7571429;outer_end=7571463;inner_rank=9;num_variants=28;variants=nssv709607,nssv709608,nssv709609,nssv709614,nssv709615,nssv709616,nssv709617,nssv709618,nssv709619,nssv709620,essv6742126,nssv709590,nssv709624,nssv709625,nssv709626,nssv709627,nssv709628,nssv709629,nssv709587,nssv709588,nssv709589,nssv709604,nssv709605,nssv709606,nssv709613,essv6695576,nssv1423352,nssv709612;num_studies=3;studies=Park2010,Wong2012b,Cooper2011;num_platforms=3;platforms=Illumina_GA,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=PEM,Custom_HMM,ADM2;num_samples=28;samples=sample_nssv709608,sample_nssv709609,sample_nssv709606,sample_nssv709607,sample_nssv709604,sample_nssv709605,sample_nssv709624,sample_nssv709625,sample_nssv709626,sample_nssv709627,sample_nssv709620,sample_nssv709628,sample_nssv709629,SSM053,NA18968,sample_nssv709590,sample_nssv709619,sample_nssv709618,sample_nssv709615,sample_nssv709614,sample_nssv709617,sample_nssv709616,sample_nssv709613,sample_nssv709612,SSM006,sample_nssv709589,sample_nssv709588,sample_nssv709587;num_samples_tested=1626;frequency=1.72%;num_unique_samples_tested=1626;nr_frequency=1.72%;PopulationSummary=European 25:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7570322	7571429	.	.	.	ID=gssv963;Name=gssv963;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7570218;inner_start=7570322;inner_end=7571429;outer_end=7571463;inner_rank=9;num_variants=28;variants=nssv709607,nssv709608,nssv709609,nssv709614,nssv709615,nssv709616,nssv709617,nssv709618,nssv709619,nssv709620,essv6742126,nssv709590,nssv709624,nssv709625,nssv709626,nssv709627,nssv709628,nssv709629,nssv709587,nssv709588,nssv709589,nssv709604,nssv709605,nssv709606,nssv709613,essv6695576,nssv1423352,nssv709612;num_studies=3;studies=Park2010,Wong2012b,Cooper2011;num_platforms=3;platforms=Illumina_GA,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=PEM,Custom_HMM,ADM2;num_samples=28;samples=sample_nssv709608,sample_nssv709609,sample_nssv709606,sample_nssv709607,sample_nssv709604,sample_nssv709605,sample_nssv709624,sample_nssv709625,sample_nssv709626,sample_nssv709627,sample_nssv709620,sample_nssv709628,sample_nssv709629,SSM053,NA18968,sample_nssv709590,sample_nssv709619,sample_nssv709618,sample_nssv709615,sample_nssv709614,sample_nssv709617,sample_nssv709616,sample_nssv709613,sample_nssv709612,SSM006,sample_nssv709589,sample_nssv709588,sample_nssv709587;num_samples_tested=1626;frequency=1.72%;num_unique_samples_tested=1626;nr_frequency=1.72%;PopulationSummary=European 25:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7571463	7571463	.	.	.	ID=gssv963;Name=gssv963;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7570218;inner_start=7570322;inner_end=7571429;outer_end=7571463;inner_rank=9;num_variants=28;variants=nssv709607,nssv709608,nssv709609,nssv709614,nssv709615,nssv709616,nssv709617,nssv709618,nssv709619,nssv709620,essv6742126,nssv709590,nssv709624,nssv709625,nssv709626,nssv709627,nssv709628,nssv709629,nssv709587,nssv709588,nssv709589,nssv709604,nssv709605,nssv709606,nssv709613,essv6695576,nssv1423352,nssv709612;num_studies=3;studies=Park2010,Wong2012b,Cooper2011;num_platforms=3;platforms=Illumina_GA,Custom_Illumina_1.2M,Agilent24M;num_algorithms=3;algorithms=PEM,Custom_HMM,ADM2;num_samples=28;samples=sample_nssv709608,sample_nssv709609,sample_nssv709606,sample_nssv709607,sample_nssv709604,sample_nssv709605,sample_nssv709624,sample_nssv709625,sample_nssv709626,sample_nssv709627,sample_nssv709620,sample_nssv709628,sample_nssv709629,SSM053,NA18968,sample_nssv709590,sample_nssv709619,sample_nssv709618,sample_nssv709615,sample_nssv709614,sample_nssv709617,sample_nssv709616,sample_nssv709613,sample_nssv709612,SSM006,sample_nssv709589,sample_nssv709588,sample_nssv709587;num_samples_tested=1626;frequency=1.72%;num_unique_samples_tested=1626;nr_frequency=1.72%;PopulationSummary=European 25:Asian 3:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7559443	7559443	.	.	.	ID=gssv967;Name=gssv967;variant_type=CNV;variant_sub_type=Loss;outer_start=7559443;inner_start=7559443;inner_end=7560194;outer_end=7560340;inner_rank=8;num_variants=61;variants=essv6937664,essv5436826,essv5457551,essv5508604,essv5516870,essv5529359,essv5575074,essv5583577,essv5663358,essv5709998,essv5730675,essv5739381,essv5788311,essv5814285,essv5840912,essv5850234,essv5851944,essv5880716,essv5922093,essv5962151,essv5974102,essv5975923,essv5997726,essv6002886,essv6037941,essv6041331,essv6052009,essv6067706,essv6114357,essv6124063,essv6221071,essv6226576,essv6241832,essv6242215,essv6243910,essv6248487,essv6249502,essv6256312,essv6268374,essv6273213,essv6276685,essv6277708,essv6323846,essv6337763,essv6338713,essv6345359,essv6387039,essv6413800,essv6427001,essv6453030,essv6482932,essv6483131,essv6486219,essv6515957,essv6539128,essv6542409,essv6544631,essv6550513,essv6557749,essv6566368,essv6576540;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_GA,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=61;samples=NA18984,NA18596,NA18616,NA20586,HG01440,HG00125,HG00663,HG00239,NA19834,HG00123,HG00705,HG00704,HG00707,NA18615,HG00608,HG00702,NA18961,NA18963,NA20518,HG00580,NA19130,HG01075,HG00427,HG00525,NA19449,NA18634,NA18635,HG00689,NA19082,HG01051,NA18550,NA18593,NA19010,NA18628,NA19395,HG00112,HG00566,HG00656,NA11994,HG00654,HG00584,HG00595,NA20787,HG00577,HG00306,NA19434,NA18623,NA18549,SSM022,NA19075,NA19074,NA19077,HG00692,HG00512,HG01183,NA19457,HG00418,NA19684,NA19453,NA20521,HG00106;num_samples_tested=1151;frequency=5.3%;num_unique_samples_tested=1151;nr_frequency=5.29%;PopulationSummary=European 11:Asian 38:Mexican 1:African 7:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 4:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7559443	7560194	.	.	.	ID=gssv967;Name=gssv967;variant_type=CNV;variant_sub_type=Loss;outer_start=7559443;inner_start=7559443;inner_end=7560194;outer_end=7560340;inner_rank=8;num_variants=61;variants=essv6937664,essv5436826,essv5457551,essv5508604,essv5516870,essv5529359,essv5575074,essv5583577,essv5663358,essv5709998,essv5730675,essv5739381,essv5788311,essv5814285,essv5840912,essv5850234,essv5851944,essv5880716,essv5922093,essv5962151,essv5974102,essv5975923,essv5997726,essv6002886,essv6037941,essv6041331,essv6052009,essv6067706,essv6114357,essv6124063,essv6221071,essv6226576,essv6241832,essv6242215,essv6243910,essv6248487,essv6249502,essv6256312,essv6268374,essv6273213,essv6276685,essv6277708,essv6323846,essv6337763,essv6338713,essv6345359,essv6387039,essv6413800,essv6427001,essv6453030,essv6482932,essv6483131,essv6486219,essv6515957,essv6539128,essv6542409,essv6544631,essv6550513,essv6557749,essv6566368,essv6576540;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_GA,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=61;samples=NA18984,NA18596,NA18616,NA20586,HG01440,HG00125,HG00663,HG00239,NA19834,HG00123,HG00705,HG00704,HG00707,NA18615,HG00608,HG00702,NA18961,NA18963,NA20518,HG00580,NA19130,HG01075,HG00427,HG00525,NA19449,NA18634,NA18635,HG00689,NA19082,HG01051,NA18550,NA18593,NA19010,NA18628,NA19395,HG00112,HG00566,HG00656,NA11994,HG00654,HG00584,HG00595,NA20787,HG00577,HG00306,NA19434,NA18623,NA18549,SSM022,NA19075,NA19074,NA19077,HG00692,HG00512,HG01183,NA19457,HG00418,NA19684,NA19453,NA20521,HG00106;num_samples_tested=1151;frequency=5.3%;num_unique_samples_tested=1151;nr_frequency=5.29%;PopulationSummary=European 11:Asian 38:Mexican 1:African 7:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 4:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7560340	7560340	.	.	.	ID=gssv967;Name=gssv967;variant_type=CNV;variant_sub_type=Loss;outer_start=7559443;inner_start=7559443;inner_end=7560194;outer_end=7560340;inner_rank=8;num_variants=61;variants=essv6937664,essv5436826,essv5457551,essv5508604,essv5516870,essv5529359,essv5575074,essv5583577,essv5663358,essv5709998,essv5730675,essv5739381,essv5788311,essv5814285,essv5840912,essv5850234,essv5851944,essv5880716,essv5922093,essv5962151,essv5974102,essv5975923,essv5997726,essv6002886,essv6037941,essv6041331,essv6052009,essv6067706,essv6114357,essv6124063,essv6221071,essv6226576,essv6241832,essv6242215,essv6243910,essv6248487,essv6249502,essv6256312,essv6268374,essv6273213,essv6276685,essv6277708,essv6323846,essv6337763,essv6338713,essv6345359,essv6387039,essv6413800,essv6427001,essv6453030,essv6482932,essv6483131,essv6486219,essv6515957,essv6539128,essv6542409,essv6544631,essv6550513,essv6557749,essv6566368,essv6576540;num_studies=2;studies=Wong2012b,1000GenomesPhase1;num_platforms=2;platforms=Illumina_GA,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM,PEM+ReadDepth+SplitRead;num_samples=61;samples=NA18984,NA18596,NA18616,NA20586,HG01440,HG00125,HG00663,HG00239,NA19834,HG00123,HG00705,HG00704,HG00707,NA18615,HG00608,HG00702,NA18961,NA18963,NA20518,HG00580,NA19130,HG01075,HG00427,HG00525,NA19449,NA18634,NA18635,HG00689,NA19082,HG01051,NA18550,NA18593,NA19010,NA18628,NA19395,HG00112,HG00566,HG00656,NA11994,HG00654,HG00584,HG00595,NA20787,HG00577,HG00306,NA19434,NA18623,NA18549,SSM022,NA19075,NA19074,NA19077,HG00692,HG00512,HG01183,NA19457,HG00418,NA19684,NA19453,NA20521,HG00106;num_samples_tested=1151;frequency=5.3%;num_unique_samples_tested=1151;nr_frequency=5.29%;PopulationSummary=European 11:Asian 38:Mexican 1:African 7:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 4:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7552939	7552939	.	.	.	ID=gssv979;Name=gssv979;variant_type=CNV;variant_sub_type=Loss;outer_start=7552939;inner_start=7552940;inner_end=7553254;outer_end=7553255;inner_rank=6;num_variants=20;variants=essv5455258,essv5460735,essv5519409,essv5543317,essv5563441,essv5631811,essv5654342,essv5659994,essv5767850,essv5770295,essv5837134,essv5930148,essv5976416,essv6293916,essv6294946,essv6359806,essv6388199,essv6496652,essv6519373,essv5309036;num_studies=2;studies=McKernan2009,1000GenomesPhase1;num_platforms=2;platforms=SOLiD,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,SplitRead;num_samples=20;samples=NA20581,NA20826,NA20537,NA20787,HG00268,NA20796,NA18595,NA07346,NA20773,NA20770,NA18507,NA12272,NA12751,HG00182,NA19068,NA20807,NA20828,NA12775,NA12348,NA07048;num_samples_tested=1056;frequency=1.89%;num_unique_samples_tested=1055;nr_frequency=1.89%;PopulationSummary=European 17:Asian 2:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7552940	7553254	.	.	.	ID=gssv979;Name=gssv979;variant_type=CNV;variant_sub_type=Loss;outer_start=7552939;inner_start=7552940;inner_end=7553254;outer_end=7553255;inner_rank=6;num_variants=20;variants=essv5455258,essv5460735,essv5519409,essv5543317,essv5563441,essv5631811,essv5654342,essv5659994,essv5767850,essv5770295,essv5837134,essv5930148,essv5976416,essv6293916,essv6294946,essv6359806,essv6388199,essv6496652,essv6519373,essv5309036;num_studies=2;studies=McKernan2009,1000GenomesPhase1;num_platforms=2;platforms=SOLiD,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,SplitRead;num_samples=20;samples=NA20581,NA20826,NA20537,NA20787,HG00268,NA20796,NA18595,NA07346,NA20773,NA20770,NA18507,NA12272,NA12751,HG00182,NA19068,NA20807,NA20828,NA12775,NA12348,NA07048;num_samples_tested=1056;frequency=1.89%;num_unique_samples_tested=1055;nr_frequency=1.89%;PopulationSummary=European 17:Asian 2:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7553255	7553255	.	.	.	ID=gssv979;Name=gssv979;variant_type=CNV;variant_sub_type=Loss;outer_start=7552939;inner_start=7552940;inner_end=7553254;outer_end=7553255;inner_rank=6;num_variants=20;variants=essv5455258,essv5460735,essv5519409,essv5543317,essv5563441,essv5631811,essv5654342,essv5659994,essv5767850,essv5770295,essv5837134,essv5930148,essv5976416,essv6293916,essv6294946,essv6359806,essv6388199,essv6496652,essv6519373,essv5309036;num_studies=2;studies=McKernan2009,1000GenomesPhase1;num_platforms=2;platforms=SOLiD,Illumina_II_IIX_HiSeq;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,SplitRead;num_samples=20;samples=NA20581,NA20826,NA20537,NA20787,HG00268,NA20796,NA18595,NA07346,NA20773,NA20770,NA18507,NA12272,NA12751,HG00182,NA19068,NA20807,NA20828,NA12775,NA12348,NA07048;num_samples_tested=1056;frequency=1.89%;num_unique_samples_tested=1055;nr_frequency=1.89%;PopulationSummary=European 17:Asian 2:Mexican 0:African 1:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7608707	7608707	.	.	.	ID=gssv987;Name=gssv987;variant_type=CNV;variant_sub_type=Loss;outer_start=7608707;inner_start=7608708;inner_end=7608991;outer_end=7609087;inner_rank=8;num_variants=75;variants=essv6950537,essv6703856,essv6929048,essv5408562,essv5420525,essv5424543,essv5425830,essv5463301,essv5467230,essv5479911,essv5484759,essv5502203,essv5552184,essv5596229,essv5598963,essv5606710,essv5621963,essv5706547,essv5706883,essv5712548,essv5731775,essv5734717,essv5758254,essv5767932,essv5777606,essv5780800,essv5818796,essv5830392,essv5833833,essv5843249,essv5859553,essv5867425,essv5869401,essv5897976,essv5922415,essv5945474,essv5969456,essv5974689,essv6002095,essv6011559,essv6023491,essv6046646,essv6047007,essv6082159,essv6134379,essv6171580,essv6172097,essv6177373,essv6181882,essv6197629,essv6202094,essv6209120,essv6227062,essv6259671,essv6292677,essv6296113,essv6307472,essv6308050,essv6332746,essv6363270,essv6364686,essv6370362,essv6381961,essv6425308,essv6448015,essv6449723,essv6454559,essv6456482,essv6481233,essv6483714,essv6491493,essv6508398,essv6521117,essv6560388,essv9740202;num_studies=3;studies=Boomsma2014,Wong2012b,1000GenomesPhase1;num_platforms=3;platforms=Illumina_GA,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=75;samples=NA18564,HG01251,NA12829,NA18563,HG00463,NA18610,HG00342,NA19758,NA19773,NA19327,HG00708,HG00662,HG01112,NA12889,NA18949,HG01354,HG00707,HG00701,NA19786,NA19785,HG00319,NA18595,NA18597,NA20299,HG00313,HG00581,HG00427,HG01070,HG00524,HG01072,HG00500,NA18635,HG01389,HG01052,HG01079,HG01051,NA19762,HG00512,NA19663,NA18559,NA18530,NA19707,HG01334,HG00345,HG00111,NA18956,HG00657,HG00654,HG00330,SSM040,HG00671,HG00534,HG01082,HG00369,HG01518,HG00323,HG00277,HG00321,SSM025,HG00125,HG00265,SSM020,HG01102,sample_essv9740202,HG01067,HG00154,NA19731,HG01069,HG01061,HG01437,HG00418,HG00589,NA18602,HG00699,HG00475;num_samples_tested=1918;frequency=3.91%;num_unique_samples_tested=1918;nr_frequency=3.91%;PopulationSummary=European 18:Asian 32:Mexican 7:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 15:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7608708	7608991	.	.	.	ID=gssv987;Name=gssv987;variant_type=CNV;variant_sub_type=Loss;outer_start=7608707;inner_start=7608708;inner_end=7608991;outer_end=7609087;inner_rank=8;num_variants=75;variants=essv6950537,essv6703856,essv6929048,essv5408562,essv5420525,essv5424543,essv5425830,essv5463301,essv5467230,essv5479911,essv5484759,essv5502203,essv5552184,essv5596229,essv5598963,essv5606710,essv5621963,essv5706547,essv5706883,essv5712548,essv5731775,essv5734717,essv5758254,essv5767932,essv5777606,essv5780800,essv5818796,essv5830392,essv5833833,essv5843249,essv5859553,essv5867425,essv5869401,essv5897976,essv5922415,essv5945474,essv5969456,essv5974689,essv6002095,essv6011559,essv6023491,essv6046646,essv6047007,essv6082159,essv6134379,essv6171580,essv6172097,essv6177373,essv6181882,essv6197629,essv6202094,essv6209120,essv6227062,essv6259671,essv6292677,essv6296113,essv6307472,essv6308050,essv6332746,essv6363270,essv6364686,essv6370362,essv6381961,essv6425308,essv6448015,essv6449723,essv6454559,essv6456482,essv6481233,essv6483714,essv6491493,essv6508398,essv6521117,essv6560388,essv9740202;num_studies=3;studies=Boomsma2014,Wong2012b,1000GenomesPhase1;num_platforms=3;platforms=Illumina_GA,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=75;samples=NA18564,HG01251,NA12829,NA18563,HG00463,NA18610,HG00342,NA19758,NA19773,NA19327,HG00708,HG00662,HG01112,NA12889,NA18949,HG01354,HG00707,HG00701,NA19786,NA19785,HG00319,NA18595,NA18597,NA20299,HG00313,HG00581,HG00427,HG01070,HG00524,HG01072,HG00500,NA18635,HG01389,HG01052,HG01079,HG01051,NA19762,HG00512,NA19663,NA18559,NA18530,NA19707,HG01334,HG00345,HG00111,NA18956,HG00657,HG00654,HG00330,SSM040,HG00671,HG00534,HG01082,HG00369,HG01518,HG00323,HG00277,HG00321,SSM025,HG00125,HG00265,SSM020,HG01102,sample_essv9740202,HG01067,HG00154,NA19731,HG01069,HG01061,HG01437,HG00418,HG00589,NA18602,HG00699,HG00475;num_samples_tested=1918;frequency=3.91%;num_unique_samples_tested=1918;nr_frequency=3.91%;PopulationSummary=European 18:Asian 32:Mexican 7:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 15:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7609087	7609087	.	.	.	ID=gssv987;Name=gssv987;variant_type=CNV;variant_sub_type=Loss;outer_start=7608707;inner_start=7608708;inner_end=7608991;outer_end=7609087;inner_rank=8;num_variants=75;variants=essv6950537,essv6703856,essv6929048,essv5408562,essv5420525,essv5424543,essv5425830,essv5463301,essv5467230,essv5479911,essv5484759,essv5502203,essv5552184,essv5596229,essv5598963,essv5606710,essv5621963,essv5706547,essv5706883,essv5712548,essv5731775,essv5734717,essv5758254,essv5767932,essv5777606,essv5780800,essv5818796,essv5830392,essv5833833,essv5843249,essv5859553,essv5867425,essv5869401,essv5897976,essv5922415,essv5945474,essv5969456,essv5974689,essv6002095,essv6011559,essv6023491,essv6046646,essv6047007,essv6082159,essv6134379,essv6171580,essv6172097,essv6177373,essv6181882,essv6197629,essv6202094,essv6209120,essv6227062,essv6259671,essv6292677,essv6296113,essv6307472,essv6308050,essv6332746,essv6363270,essv6364686,essv6370362,essv6381961,essv6425308,essv6448015,essv6449723,essv6454559,essv6456482,essv6481233,essv6483714,essv6491493,essv6508398,essv6521117,essv6560388,essv9740202;num_studies=3;studies=Boomsma2014,Wong2012b,1000GenomesPhase1;num_platforms=3;platforms=Illumina_GA,Illumina_HiSeq,Illumina_II_IIX_HiSeq;num_algorithms=3;algorithms=PEM,PEM+ReadDepth+SplitRead,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=75;samples=NA18564,HG01251,NA12829,NA18563,HG00463,NA18610,HG00342,NA19758,NA19773,NA19327,HG00708,HG00662,HG01112,NA12889,NA18949,HG01354,HG00707,HG00701,NA19786,NA19785,HG00319,NA18595,NA18597,NA20299,HG00313,HG00581,HG00427,HG01070,HG00524,HG01072,HG00500,NA18635,HG01389,HG01052,HG01079,HG01051,NA19762,HG00512,NA19663,NA18559,NA18530,NA19707,HG01334,HG00345,HG00111,NA18956,HG00657,HG00654,HG00330,SSM040,HG00671,HG00534,HG01082,HG00369,HG01518,HG00323,HG00277,HG00321,SSM025,HG00125,HG00265,SSM020,HG01102,sample_essv9740202,HG01067,HG00154,NA19731,HG01069,HG01061,HG01437,HG00418,HG00589,NA18602,HG00699,HG00475;num_samples_tested=1918;frequency=3.91%;num_unique_samples_tested=1918;nr_frequency=3.91%;PopulationSummary=European 18:Asian 32:Mexican 7:African 3:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 15:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7608740	7608740	.	.	.	ID=gssv990;Name=gssv990;variant_type=CNV;variant_sub_type=Loss;outer_start=7608740;inner_start=7608740;inner_end=7608967;outer_end=7608969;inner_rank=2;num_variants=2;variants=essv3860626,essv6686147;num_studies=2;studies=Wong2012b,Levy2007;num_platforms=2;platforms=Illumina_GA,SangerSequencing;num_algorithms=2;algorithms=PEM,AssemblyComparison;num_samples=2;samples=SSM035,HuRef;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7608740	7608967	.	.	.	ID=gssv990;Name=gssv990;variant_type=CNV;variant_sub_type=Loss;outer_start=7608740;inner_start=7608740;inner_end=7608967;outer_end=7608969;inner_rank=2;num_variants=2;variants=essv3860626,essv6686147;num_studies=2;studies=Wong2012b,Levy2007;num_platforms=2;platforms=Illumina_GA,SangerSequencing;num_algorithms=2;algorithms=PEM,AssemblyComparison;num_samples=2;samples=SSM035,HuRef;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7608969	7608969	.	.	.	ID=gssv990;Name=gssv990;variant_type=CNV;variant_sub_type=Loss;outer_start=7608740;inner_start=7608740;inner_end=7608967;outer_end=7608969;inner_rank=2;num_variants=2;variants=essv3860626,essv6686147;num_studies=2;studies=Wong2012b,Levy2007;num_platforms=2;platforms=Illumina_GA,SangerSequencing;num_algorithms=2;algorithms=PEM,AssemblyComparison;num_samples=2;samples=SSM035,HuRef;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 1:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7645725	7645725	.	.	.	ID=gssv998;Name=gssv998;variant_type=CNV;variant_sub_type=Loss;outer_start=7645725;inner_start=7645731;inner_end=7648448;outer_end=7648453;inner_rank=8;num_variants=21;variants=essv9847477,essv9847478,essv9847479,essv9847480,essv9847481,essv9847482,essv9847483,essv9847484,essv9847485,essv9847486,essv9847487,essv9847488,essv9847489,essv9847490,essv9847491,essv9847492,essv5833909,essv5955720,essv6057115,essv6269373,essv6336025;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=16;samples=HG02433,NA19035,NA19026,NA19093,HG02450,HG03136,NA19916,HG02546,NA19383,NA20346,HG01894,NA19456,HG02485,HG01247,NA19399,NA19374;num_samples_tested=3559;frequency=0.45%;num_unique_samples_tested=2562;nr_frequency=0.62%;PopulationSummary=European 0:Asian 0:Mexican 0:African 15:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7645731	7648448	.	.	.	ID=gssv998;Name=gssv998;variant_type=CNV;variant_sub_type=Loss;outer_start=7645725;inner_start=7645731;inner_end=7648448;outer_end=7648453;inner_rank=8;num_variants=21;variants=essv9847477,essv9847478,essv9847479,essv9847480,essv9847481,essv9847482,essv9847483,essv9847484,essv9847485,essv9847486,essv9847487,essv9847488,essv9847489,essv9847490,essv9847491,essv9847492,essv5833909,essv5955720,essv6057115,essv6269373,essv6336025;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=16;samples=HG02433,NA19035,NA19026,NA19093,HG02450,HG03136,NA19916,HG02546,NA19383,NA20346,HG01894,NA19456,HG02485,HG01247,NA19399,NA19374;num_samples_tested=3559;frequency=0.45%;num_unique_samples_tested=2562;nr_frequency=0.62%;PopulationSummary=European 0:Asian 0:Mexican 0:African 15:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7648453	7648453	.	.	.	ID=gssv998;Name=gssv998;variant_type=CNV;variant_sub_type=Loss;outer_start=7645725;inner_start=7645731;inner_end=7648448;outer_end=7648453;inner_rank=8;num_variants=21;variants=essv9847477,essv9847478,essv9847479,essv9847480,essv9847481,essv9847482,essv9847483,essv9847484,essv9847485,essv9847486,essv9847487,essv9847488,essv9847489,essv9847490,essv9847491,essv9847492,essv5833909,essv5955720,essv6057115,essv6269373,essv6336025;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=16;samples=HG02433,NA19035,NA19026,NA19093,HG02450,HG03136,NA19916,HG02546,NA19383,NA20346,HG01894,NA19456,HG02485,HG01247,NA19399,NA19374;num_samples_tested=3559;frequency=0.45%;num_unique_samples_tested=2562;nr_frequency=0.62%;PopulationSummary=European 0:Asian 0:Mexican 0:African 15:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7763029	7763029	.	.	.	ID=gssv1004;Name=gssv1004;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7763029;inner_start=7763029;inner_end=7765558;outer_end=7765558;inner_rank=7;num_variants=2;variants=essv78003,nssv709643;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=2;samples=sample_nssv709643,NA06985;num_samples_tested=1540;frequency=0.13%;num_unique_samples_tested=1540;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7763029	7765558	.	.	.	ID=gssv1004;Name=gssv1004;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7763029;inner_start=7763029;inner_end=7765558;outer_end=7765558;inner_rank=7;num_variants=2;variants=essv78003,nssv709643;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=2;samples=sample_nssv709643,NA06985;num_samples_tested=1540;frequency=0.13%;num_unique_samples_tested=1540;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7765558	7765558	.	.	.	ID=gssv1004;Name=gssv1004;variant_type=CNV;variant_sub_type=Gain+Loss;outer_start=7763029;inner_start=7763029;inner_end=7765558;outer_end=7765558;inner_rank=7;num_variants=2;variants=essv78003,nssv709643;num_studies=2;studies=Cooper2011,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Custom_Illumina_1.2M;num_algorithms=2;algorithms=Custom_HMM,GADA;num_samples=2;samples=sample_nssv709643,NA06985;num_samples_tested=1540;frequency=0.13%;num_unique_samples_tested=1540;nr_frequency=0.12%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7803121	7803121	.	.	.	ID=gssv1005;Name=gssv1005;variant_type=CNV;variant_sub_type=Loss;outer_start=7803121;inner_start=7803137;inner_end=7804437;outer_end=7804451;inner_rank=8;num_variants=16;variants=essv9847517,essv9847518,essv9847519,essv9847520,essv9847521,essv9847522,essv9847523,essv9847524,essv9847525,essv9847526,essv9847527,essv5719957,essv5838521,essv5844959,essv6423324,essv6542419;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=11;samples=NA19466,NA19435,HG02610,NA19198,HG03127,NA19703,NA19332,HG03112,NA20127,HG01170,NA19159;num_samples_tested=3559;frequency=0.31%;num_unique_samples_tested=2562;nr_frequency=0.42%;PopulationSummary=European 0:Asian 0:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7803137	7804437	.	.	.	ID=gssv1005;Name=gssv1005;variant_type=CNV;variant_sub_type=Loss;outer_start=7803121;inner_start=7803137;inner_end=7804437;outer_end=7804451;inner_rank=8;num_variants=16;variants=essv9847517,essv9847518,essv9847519,essv9847520,essv9847521,essv9847522,essv9847523,essv9847524,essv9847525,essv9847526,essv9847527,essv5719957,essv5838521,essv5844959,essv6423324,essv6542419;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=11;samples=NA19466,NA19435,HG02610,NA19198,HG03127,NA19703,NA19332,HG03112,NA20127,HG01170,NA19159;num_samples_tested=3559;frequency=0.31%;num_unique_samples_tested=2562;nr_frequency=0.42%;PopulationSummary=European 0:Asian 0:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7804451	7804451	.	.	.	ID=gssv1005;Name=gssv1005;variant_type=CNV;variant_sub_type=Loss;outer_start=7803121;inner_start=7803137;inner_end=7804437;outer_end=7804451;inner_rank=8;num_variants=16;variants=essv9847517,essv9847518,essv9847519,essv9847520,essv9847521,essv9847522,essv9847523,essv9847524,essv9847525,essv9847526,essv9847527,essv5719957,essv5838521,essv5844959,essv6423324,essv6542419;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=11;samples=NA19466,NA19435,HG02610,NA19198,HG03127,NA19703,NA19332,HG03112,NA20127,HG01170,NA19159;num_samples_tested=3559;frequency=0.31%;num_unique_samples_tested=2562;nr_frequency=0.42%;PopulationSummary=European 0:Asian 0:Mexican 0:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 1:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7908752	7908752	.	.	.	ID=gssv1014;Name=gssv1014;variant_type=CNV;variant_sub_type=Loss;outer_start=7908752;inner_start=7908787;inner_end=7909509;outer_end=7909513;inner_rank=8;num_variants=6;variants=essv5452478,essv9847528,essv9847529,essv9847530,essv9847531,essv9847532;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=NA21098,NA21128,HG02224,HG00310,HG01705;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7908787	7909509	.	.	.	ID=gssv1014;Name=gssv1014;variant_type=CNV;variant_sub_type=Loss;outer_start=7908752;inner_start=7908787;inner_end=7909509;outer_end=7909513;inner_rank=8;num_variants=6;variants=essv5452478,essv9847528,essv9847529,essv9847530,essv9847531,essv9847532;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=NA21098,NA21128,HG02224,HG00310,HG01705;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7909513	7909513	.	.	.	ID=gssv1014;Name=gssv1014;variant_type=CNV;variant_sub_type=Loss;outer_start=7908752;inner_start=7908787;inner_end=7909509;outer_end=7909513;inner_rank=8;num_variants=6;variants=essv5452478,essv9847528,essv9847529,essv9847530,essv9847531,essv9847532;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=5;samples=NA21098,NA21128,HG02224,HG00310,HG01705;num_samples_tested=3559;frequency=0.14%;num_unique_samples_tested=2562;nr_frequency=0.19%;PopulationSummary=European 3:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7921468	7921468	.	.	.	ID=gssv1015;Name=gssv1015;variant_type=CNV;variant_sub_type=Gain;outer_start=7921468;inner_start=7921710;inner_end=7956379;outer_end=7959991;inner_rank=8;num_variants=2;variants=essv9789644,essv9847533;num_studies=2;studies=Uddin2014,1000GenomesPhase3;num_platforms=2;platforms=CytoScanHD_2.7M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=ChAS,RD+PEM;num_samples=2;samples=400411TG,NA18941;num_samples_tested=3377;frequency=0.06%;num_unique_samples_tested=3377;nr_frequency=0.05%;PopulationSummary=European 0:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7921710	7956379	.	.	.	ID=gssv1015;Name=gssv1015;variant_type=CNV;variant_sub_type=Gain;outer_start=7921468;inner_start=7921710;inner_end=7956379;outer_end=7959991;inner_rank=8;num_variants=2;variants=essv9789644,essv9847533;num_studies=2;studies=Uddin2014,1000GenomesPhase3;num_platforms=2;platforms=CytoScanHD_2.7M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=ChAS,RD+PEM;num_samples=2;samples=400411TG,NA18941;num_samples_tested=3377;frequency=0.06%;num_unique_samples_tested=3377;nr_frequency=0.05%;PopulationSummary=European 0:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7959991	7959991	.	.	.	ID=gssv1015;Name=gssv1015;variant_type=CNV;variant_sub_type=Gain;outer_start=7921468;inner_start=7921710;inner_end=7956379;outer_end=7959991;inner_rank=8;num_variants=2;variants=essv9789644,essv9847533;num_studies=2;studies=Uddin2014,1000GenomesPhase3;num_platforms=2;platforms=CytoScanHD_2.7M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=ChAS,RD+PEM;num_samples=2;samples=400411TG,NA18941;num_samples_tested=3377;frequency=0.06%;num_unique_samples_tested=3377;nr_frequency=0.05%;PopulationSummary=European 0:Asian 2:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7924934	7924934	.	.	.	ID=gssv1016;Name=gssv1016;variant_type=CNV;variant_sub_type=Loss;outer_start=7924934;inner_start=7924949;inner_end=7925580;outer_end=7925672;inner_rank=7;num_variants=9;variants=essv27487,essv31536,essv33764,essv67727,essv75251,essv79796,nssv1420957,essv6756541,essv6682817;num_studies=5;studies=Ju2010,Wang2008,Conrad2009,Ahn2009,Wong2012b;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=3;algorithms=PEM,ReadDepth,GADA;num_samples=9;samples=NA18858,YH,NA12004,NA10851,SSM034,NA12749,NA18502,SJK,SSM059;num_samples_tested=139;frequency=6.47%;num_unique_samples_tested=139;nr_frequency=6.47%;PopulationSummary=European 3:Asian 4:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7924949	7925580	.	.	.	ID=gssv1016;Name=gssv1016;variant_type=CNV;variant_sub_type=Loss;outer_start=7924934;inner_start=7924949;inner_end=7925580;outer_end=7925672;inner_rank=7;num_variants=9;variants=essv27487,essv31536,essv33764,essv67727,essv75251,essv79796,nssv1420957,essv6756541,essv6682817;num_studies=5;studies=Ju2010,Wang2008,Conrad2009,Ahn2009,Wong2012b;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=3;algorithms=PEM,ReadDepth,GADA;num_samples=9;samples=NA18858,YH,NA12004,NA10851,SSM034,NA12749,NA18502,SJK,SSM059;num_samples_tested=139;frequency=6.47%;num_unique_samples_tested=139;nr_frequency=6.47%;PopulationSummary=European 3:Asian 4:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7925672	7925672	.	.	.	ID=gssv1016;Name=gssv1016;variant_type=CNV;variant_sub_type=Loss;outer_start=7924934;inner_start=7924949;inner_end=7925580;outer_end=7925672;inner_rank=7;num_variants=9;variants=essv27487,essv31536,essv33764,essv67727,essv75251,essv79796,nssv1420957,essv6756541,essv6682817;num_studies=5;studies=Ju2010,Wang2008,Conrad2009,Ahn2009,Wong2012b;num_platforms=2;platforms=Illumina_GA,NimbleGen42M;num_algorithms=3;algorithms=PEM,ReadDepth,GADA;num_samples=9;samples=NA18858,YH,NA12004,NA10851,SSM034,NA12749,NA18502,SJK,SSM059;num_samples_tested=139;frequency=6.47%;num_unique_samples_tested=139;nr_frequency=6.47%;PopulationSummary=European 3:Asian 4:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7924937	7924937	.	.	.	ID=gssv1018;Name=gssv1018;variant_type=CNV;variant_sub_type=Loss;outer_start=7924937;inner_start=7924937;inner_end=7925384;outer_end=7925384;inner_rank=1;num_variants=233;variants=nssv179299,essv5406419,essv5412831,essv5419681,essv5431965,essv5433918,essv5438546,essv5446050,essv5448321,essv5451346,essv5452962,essv5463023,essv5463498,essv5476783,essv5477186,essv5481507,essv5481799,essv5482282,essv5487791,essv5500862,essv5504634,essv5514645,essv5514785,essv5522498,essv5523146,essv5529064,essv5529811,essv5533668,essv5535767,essv5545435,essv5553418,essv5557584,essv5568558,essv5578543,essv5580851,essv5592926,essv5601098,essv5603289,essv5604664,essv5604893,essv5605498,essv5605737,essv5609501,essv5612438,essv5618733,essv5620420,essv5623821,essv5628583,essv5630473,essv5644539,essv5645969,essv5651255,essv5662041,essv5663920,essv5669965,essv5675700,essv5675803,essv5686994,essv5696355,essv5700534,essv5703301,essv5706376,essv5714806,essv5731566,essv5732882,essv5738581,essv5739240,essv5741919,essv5742128,essv5749682,essv5749862,essv5755871,essv5757180,essv5763197,essv5764081,essv5768657,essv5769304,essv5770734,essv5774770,essv5782284,essv5783009,essv5785920,essv5787385,essv5790466,essv5792118,essv5798382,essv5809859,essv5812895,essv5818900,essv5820660,essv5823164,essv5825612,essv5827539,essv5828338,essv5833541,essv5849787,essv5853694,essv5857566,essv5865517,essv5866722,essv5867074,essv5868308,essv5887726,essv5895385,essv5902168,essv5909595,essv5916279,essv5937051,essv5942016,essv5944620,essv5945998,essv5956820,essv5958114,essv5961735,essv5969046,essv5979087,essv5981820,essv6002534,essv6017867,essv6018318,essv6018911,essv6019104,essv6023986,essv6026868,essv6035737,essv6048322,essv6048485,essv6049443,essv6051596,essv6054870,essv6067271,essv6068574,essv6069827,essv6071488,essv6071609,essv6071672,essv6077397,essv6077919,essv6080098,essv6081705,essv6082818,essv6087682,essv6094165,essv6103553,essv6112075,essv6118058,essv6125274,essv6125308,essv6126415,essv6126445,essv6132482,essv6132893,essv6148849,essv6152229,essv6155420,essv6163458,essv6171239,essv6171633,essv6179194,essv6185869,essv6195881,essv6203039,essv6217184,essv6232486,essv6237111,essv6243959,essv6247186,essv6257924,essv6260868,essv6262983,essv6265135,essv6266602,essv6271034,essv6271673,essv6274257,essv6280524,essv6281345,essv6285255,essv6287297,essv6290565,essv6293654,essv6311558,essv6320462,essv6337729,essv6340838,essv6356675,essv6358896,essv6362683,essv6363300,essv6371896,essv6373175,essv6380029,essv6380499,essv6393424,essv6397283,essv6410868,essv6430122,essv6431536,essv6432049,essv6443466,essv6456380,essv6459955,essv6465980,essv6480407,essv6483548,essv6488901,essv6489640,essv6492955,essv6493965,essv6500087,essv6502651,essv6510402,essv6532343,essv6533523,essv6536918,essv6537226,essv6538912,essv6543548,essv6543789,essv6548934,essv6549133,essv6555651,essv6561835,essv6563493,essv6571214,essv6574163,essv6586392,essv6588926,essv6590580,essv6591211,essv6594272,essv6595168,essv6596517;num_studies=2;studies=1000GenomesPhase1,Mills2006;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,SangerSequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,SplitRead;num_samples=233;samples=NA18987,NA18984,NA18596,NA18560,NA18561,NA18562,HG00654,HG00626,HG00707,HG01440,HG00620,NA18612,NA18868,HG00464,HG00345,HG00271,HG00684,HG00273,NA18634,HG00275,HG00277,HG00276,NA19682,HG01390,NA19681,HG00375,NA19685,HG00427,HG00421,HG00543,NA19359,NA19446,HG00608,HG00428,NA19664,NA18550,NA19088,NA18557,NA19663,NA18559,NA18597,HG00653,HG00651,HG00346,HG00657,HG01383,HG00342,HG01148,HG01149,HG00158,HG00154,HG00267,NA18977,HG00263,NA19075,HG00559,NA19077,NA19076,HG01061,NA19072,HG00419,HG00418,HG00556,HG00557,HG00614,NA12546,NA18548,NA18576,NA18546,HG00590,NA18544,NA18542,n/a,NA19716,NA19717,NA19007,HG00592,HG01174,HG01171,HG01173,HG00281,NA18963,HG00315,NA19062,NA19788,HG00628,HG01072,HG01073,HG00404,HG00403,HG00705,NA18530,HG00284,NA19002,HG00704,NA18532,HG00513,NA18536,NA19312,HG00177,NA19396,NA19391,HG00701,HG00671,HG00672,HG00326,HG00702,NA19085,HG00329,HG00328,HG00479,HG00478,HG01069,HG00278,NA18627,HG00472,NA18606,NA18623,HG00476,HG00475,NA18620,HG00584,HG00237,HG00236,NA19818,HG00662,HG00663,HG00108,HG00334,HG01354,HG00337,HG01351,HG00331,HG00589,NA18549,HG00583,HG00339,HG00581,HG00580,HG00740,NA18638,NA19720,HG00501,HG00500,NA19084,NA18635,NA18636,HG00463,NA19080,NA18632,NA18633,HG01492,NA19723,HG01491,HG01051,HG00369,NA18543,HG00111,NA19445,HG00656,HG01133,HG01342,NA18637,NA18619,HG00619,HG00309,HG00595,HG01107,HG00613,HG01101,HG01102,HG00610,NA18985,HG01187,HG00693,HG00692,HG00512,HG00690,NA18602,HG00449,HG00698,NA19082,NA18616,HG00330,NA18621,NA18567,HG00125,NA18599,HG00442,HG00443,NA18614,NA18615,HG00253,NA18613,HG00251,HG00319,NA18595,HG01462,HG00448,HG00607,HG01134,NA18592,NA19130,HG00525,HG00524,HG00683,HG00689,NA18577,HG00257,NA18574,HG01136,NA18999,HG01124,HG01125,HG01052,NA18626,NA18941,NA18990,HG00534,HG00638,HG00246,NA18624,NA18610,HG00249,HG00437,HG00436,HG00650,HG01366,HG00536,HG00537,NA19455,HG00533,HG00531;num_samples_tested=1079;frequency=21.59%;num_unique_samples_tested=1079;nr_frequency=21.59%;PopulationSummary=European 40:Asian 140:Mexican 10:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 32:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7924937	7925384	.	.	.	ID=gssv1018;Name=gssv1018;variant_type=CNV;variant_sub_type=Loss;outer_start=7924937;inner_start=7924937;inner_end=7925384;outer_end=7925384;inner_rank=1;num_variants=233;variants=nssv179299,essv5406419,essv5412831,essv5419681,essv5431965,essv5433918,essv5438546,essv5446050,essv5448321,essv5451346,essv5452962,essv5463023,essv5463498,essv5476783,essv5477186,essv5481507,essv5481799,essv5482282,essv5487791,essv5500862,essv5504634,essv5514645,essv5514785,essv5522498,essv5523146,essv5529064,essv5529811,essv5533668,essv5535767,essv5545435,essv5553418,essv5557584,essv5568558,essv5578543,essv5580851,essv5592926,essv5601098,essv5603289,essv5604664,essv5604893,essv5605498,essv5605737,essv5609501,essv5612438,essv5618733,essv5620420,essv5623821,essv5628583,essv5630473,essv5644539,essv5645969,essv5651255,essv5662041,essv5663920,essv5669965,essv5675700,essv5675803,essv5686994,essv5696355,essv5700534,essv5703301,essv5706376,essv5714806,essv5731566,essv5732882,essv5738581,essv5739240,essv5741919,essv5742128,essv5749682,essv5749862,essv5755871,essv5757180,essv5763197,essv5764081,essv5768657,essv5769304,essv5770734,essv5774770,essv5782284,essv5783009,essv5785920,essv5787385,essv5790466,essv5792118,essv5798382,essv5809859,essv5812895,essv5818900,essv5820660,essv5823164,essv5825612,essv5827539,essv5828338,essv5833541,essv5849787,essv5853694,essv5857566,essv5865517,essv5866722,essv5867074,essv5868308,essv5887726,essv5895385,essv5902168,essv5909595,essv5916279,essv5937051,essv5942016,essv5944620,essv5945998,essv5956820,essv5958114,essv5961735,essv5969046,essv5979087,essv5981820,essv6002534,essv6017867,essv6018318,essv6018911,essv6019104,essv6023986,essv6026868,essv6035737,essv6048322,essv6048485,essv6049443,essv6051596,essv6054870,essv6067271,essv6068574,essv6069827,essv6071488,essv6071609,essv6071672,essv6077397,essv6077919,essv6080098,essv6081705,essv6082818,essv6087682,essv6094165,essv6103553,essv6112075,essv6118058,essv6125274,essv6125308,essv6126415,essv6126445,essv6132482,essv6132893,essv6148849,essv6152229,essv6155420,essv6163458,essv6171239,essv6171633,essv6179194,essv6185869,essv6195881,essv6203039,essv6217184,essv6232486,essv6237111,essv6243959,essv6247186,essv6257924,essv6260868,essv6262983,essv6265135,essv6266602,essv6271034,essv6271673,essv6274257,essv6280524,essv6281345,essv6285255,essv6287297,essv6290565,essv6293654,essv6311558,essv6320462,essv6337729,essv6340838,essv6356675,essv6358896,essv6362683,essv6363300,essv6371896,essv6373175,essv6380029,essv6380499,essv6393424,essv6397283,essv6410868,essv6430122,essv6431536,essv6432049,essv6443466,essv6456380,essv6459955,essv6465980,essv6480407,essv6483548,essv6488901,essv6489640,essv6492955,essv6493965,essv6500087,essv6502651,essv6510402,essv6532343,essv6533523,essv6536918,essv6537226,essv6538912,essv6543548,essv6543789,essv6548934,essv6549133,essv6555651,essv6561835,essv6563493,essv6571214,essv6574163,essv6586392,essv6588926,essv6590580,essv6591211,essv6594272,essv6595168,essv6596517;num_studies=2;studies=1000GenomesPhase1,Mills2006;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,SangerSequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,SplitRead;num_samples=233;samples=NA18987,NA18984,NA18596,NA18560,NA18561,NA18562,HG00654,HG00626,HG00707,HG01440,HG00620,NA18612,NA18868,HG00464,HG00345,HG00271,HG00684,HG00273,NA18634,HG00275,HG00277,HG00276,NA19682,HG01390,NA19681,HG00375,NA19685,HG00427,HG00421,HG00543,NA19359,NA19446,HG00608,HG00428,NA19664,NA18550,NA19088,NA18557,NA19663,NA18559,NA18597,HG00653,HG00651,HG00346,HG00657,HG01383,HG00342,HG01148,HG01149,HG00158,HG00154,HG00267,NA18977,HG00263,NA19075,HG00559,NA19077,NA19076,HG01061,NA19072,HG00419,HG00418,HG00556,HG00557,HG00614,NA12546,NA18548,NA18576,NA18546,HG00590,NA18544,NA18542,n/a,NA19716,NA19717,NA19007,HG00592,HG01174,HG01171,HG01173,HG00281,NA18963,HG00315,NA19062,NA19788,HG00628,HG01072,HG01073,HG00404,HG00403,HG00705,NA18530,HG00284,NA19002,HG00704,NA18532,HG00513,NA18536,NA19312,HG00177,NA19396,NA19391,HG00701,HG00671,HG00672,HG00326,HG00702,NA19085,HG00329,HG00328,HG00479,HG00478,HG01069,HG00278,NA18627,HG00472,NA18606,NA18623,HG00476,HG00475,NA18620,HG00584,HG00237,HG00236,NA19818,HG00662,HG00663,HG00108,HG00334,HG01354,HG00337,HG01351,HG00331,HG00589,NA18549,HG00583,HG00339,HG00581,HG00580,HG00740,NA18638,NA19720,HG00501,HG00500,NA19084,NA18635,NA18636,HG00463,NA19080,NA18632,NA18633,HG01492,NA19723,HG01491,HG01051,HG00369,NA18543,HG00111,NA19445,HG00656,HG01133,HG01342,NA18637,NA18619,HG00619,HG00309,HG00595,HG01107,HG00613,HG01101,HG01102,HG00610,NA18985,HG01187,HG00693,HG00692,HG00512,HG00690,NA18602,HG00449,HG00698,NA19082,NA18616,HG00330,NA18621,NA18567,HG00125,NA18599,HG00442,HG00443,NA18614,NA18615,HG00253,NA18613,HG00251,HG00319,NA18595,HG01462,HG00448,HG00607,HG01134,NA18592,NA19130,HG00525,HG00524,HG00683,HG00689,NA18577,HG00257,NA18574,HG01136,NA18999,HG01124,HG01125,HG01052,NA18626,NA18941,NA18990,HG00534,HG00638,HG00246,NA18624,NA18610,HG00249,HG00437,HG00436,HG00650,HG01366,HG00536,HG00537,NA19455,HG00533,HG00531;num_samples_tested=1079;frequency=21.59%;num_unique_samples_tested=1079;nr_frequency=21.59%;PopulationSummary=European 40:Asian 140:Mexican 10:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 32:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7925384	7925384	.	.	.	ID=gssv1018;Name=gssv1018;variant_type=CNV;variant_sub_type=Loss;outer_start=7924937;inner_start=7924937;inner_end=7925384;outer_end=7925384;inner_rank=1;num_variants=233;variants=nssv179299,essv5406419,essv5412831,essv5419681,essv5431965,essv5433918,essv5438546,essv5446050,essv5448321,essv5451346,essv5452962,essv5463023,essv5463498,essv5476783,essv5477186,essv5481507,essv5481799,essv5482282,essv5487791,essv5500862,essv5504634,essv5514645,essv5514785,essv5522498,essv5523146,essv5529064,essv5529811,essv5533668,essv5535767,essv5545435,essv5553418,essv5557584,essv5568558,essv5578543,essv5580851,essv5592926,essv5601098,essv5603289,essv5604664,essv5604893,essv5605498,essv5605737,essv5609501,essv5612438,essv5618733,essv5620420,essv5623821,essv5628583,essv5630473,essv5644539,essv5645969,essv5651255,essv5662041,essv5663920,essv5669965,essv5675700,essv5675803,essv5686994,essv5696355,essv5700534,essv5703301,essv5706376,essv5714806,essv5731566,essv5732882,essv5738581,essv5739240,essv5741919,essv5742128,essv5749682,essv5749862,essv5755871,essv5757180,essv5763197,essv5764081,essv5768657,essv5769304,essv5770734,essv5774770,essv5782284,essv5783009,essv5785920,essv5787385,essv5790466,essv5792118,essv5798382,essv5809859,essv5812895,essv5818900,essv5820660,essv5823164,essv5825612,essv5827539,essv5828338,essv5833541,essv5849787,essv5853694,essv5857566,essv5865517,essv5866722,essv5867074,essv5868308,essv5887726,essv5895385,essv5902168,essv5909595,essv5916279,essv5937051,essv5942016,essv5944620,essv5945998,essv5956820,essv5958114,essv5961735,essv5969046,essv5979087,essv5981820,essv6002534,essv6017867,essv6018318,essv6018911,essv6019104,essv6023986,essv6026868,essv6035737,essv6048322,essv6048485,essv6049443,essv6051596,essv6054870,essv6067271,essv6068574,essv6069827,essv6071488,essv6071609,essv6071672,essv6077397,essv6077919,essv6080098,essv6081705,essv6082818,essv6087682,essv6094165,essv6103553,essv6112075,essv6118058,essv6125274,essv6125308,essv6126415,essv6126445,essv6132482,essv6132893,essv6148849,essv6152229,essv6155420,essv6163458,essv6171239,essv6171633,essv6179194,essv6185869,essv6195881,essv6203039,essv6217184,essv6232486,essv6237111,essv6243959,essv6247186,essv6257924,essv6260868,essv6262983,essv6265135,essv6266602,essv6271034,essv6271673,essv6274257,essv6280524,essv6281345,essv6285255,essv6287297,essv6290565,essv6293654,essv6311558,essv6320462,essv6337729,essv6340838,essv6356675,essv6358896,essv6362683,essv6363300,essv6371896,essv6373175,essv6380029,essv6380499,essv6393424,essv6397283,essv6410868,essv6430122,essv6431536,essv6432049,essv6443466,essv6456380,essv6459955,essv6465980,essv6480407,essv6483548,essv6488901,essv6489640,essv6492955,essv6493965,essv6500087,essv6502651,essv6510402,essv6532343,essv6533523,essv6536918,essv6537226,essv6538912,essv6543548,essv6543789,essv6548934,essv6549133,essv6555651,essv6561835,essv6563493,essv6571214,essv6574163,essv6586392,essv6588926,essv6590580,essv6591211,essv6594272,essv6595168,essv6596517;num_studies=2;studies=1000GenomesPhase1,Mills2006;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,SangerSequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,SplitRead;num_samples=233;samples=NA18987,NA18984,NA18596,NA18560,NA18561,NA18562,HG00654,HG00626,HG00707,HG01440,HG00620,NA18612,NA18868,HG00464,HG00345,HG00271,HG00684,HG00273,NA18634,HG00275,HG00277,HG00276,NA19682,HG01390,NA19681,HG00375,NA19685,HG00427,HG00421,HG00543,NA19359,NA19446,HG00608,HG00428,NA19664,NA18550,NA19088,NA18557,NA19663,NA18559,NA18597,HG00653,HG00651,HG00346,HG00657,HG01383,HG00342,HG01148,HG01149,HG00158,HG00154,HG00267,NA18977,HG00263,NA19075,HG00559,NA19077,NA19076,HG01061,NA19072,HG00419,HG00418,HG00556,HG00557,HG00614,NA12546,NA18548,NA18576,NA18546,HG00590,NA18544,NA18542,n/a,NA19716,NA19717,NA19007,HG00592,HG01174,HG01171,HG01173,HG00281,NA18963,HG00315,NA19062,NA19788,HG00628,HG01072,HG01073,HG00404,HG00403,HG00705,NA18530,HG00284,NA19002,HG00704,NA18532,HG00513,NA18536,NA19312,HG00177,NA19396,NA19391,HG00701,HG00671,HG00672,HG00326,HG00702,NA19085,HG00329,HG00328,HG00479,HG00478,HG01069,HG00278,NA18627,HG00472,NA18606,NA18623,HG00476,HG00475,NA18620,HG00584,HG00237,HG00236,NA19818,HG00662,HG00663,HG00108,HG00334,HG01354,HG00337,HG01351,HG00331,HG00589,NA18549,HG00583,HG00339,HG00581,HG00580,HG00740,NA18638,NA19720,HG00501,HG00500,NA19084,NA18635,NA18636,HG00463,NA19080,NA18632,NA18633,HG01492,NA19723,HG01491,HG01051,HG00369,NA18543,HG00111,NA19445,HG00656,HG01133,HG01342,NA18637,NA18619,HG00619,HG00309,HG00595,HG01107,HG00613,HG01101,HG01102,HG00610,NA18985,HG01187,HG00693,HG00692,HG00512,HG00690,NA18602,HG00449,HG00698,NA19082,NA18616,HG00330,NA18621,NA18567,HG00125,NA18599,HG00442,HG00443,NA18614,NA18615,HG00253,NA18613,HG00251,HG00319,NA18595,HG01462,HG00448,HG00607,HG01134,NA18592,NA19130,HG00525,HG00524,HG00683,HG00689,NA18577,HG00257,NA18574,HG01136,NA18999,HG01124,HG01125,HG01052,NA18626,NA18941,NA18990,HG00534,HG00638,HG00246,NA18624,NA18610,HG00249,HG00437,HG00436,HG00650,HG01366,HG00536,HG00537,NA19455,HG00533,HG00531;num_samples_tested=1079;frequency=21.59%;num_unique_samples_tested=1079;nr_frequency=21.59%;PopulationSummary=European 40:Asian 140:Mexican 10:African 10:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 32:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7963046	7963046	.	.	.	ID=gssv1023;Name=gssv1023;variant_type=CNV;variant_sub_type=Loss;outer_start=7963046;inner_start=7963077;inner_end=7963365;outer_end=7963394;inner_rank=8;num_variants=10;variants=essv6773427,essv9740424,essv6686148,essv6725844,essv6941774,essv6675192,essv6898604,essv6929051,essv6721996,essv6972323;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=10;samples=SSM045,SSM029,SSM035,SSM032,SSM020,SSM023,SSM100,SSM066,SSM046,sample_essv9740424;num_samples_tested=863;frequency=1.16%;num_unique_samples_tested=863;nr_frequency=1.15%;PopulationSummary=European 1:Asian 9:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7963077	7963365	.	.	.	ID=gssv1023;Name=gssv1023;variant_type=CNV;variant_sub_type=Loss;outer_start=7963046;inner_start=7963077;inner_end=7963365;outer_end=7963394;inner_rank=8;num_variants=10;variants=essv6773427,essv9740424,essv6686148,essv6725844,essv6941774,essv6675192,essv6898604,essv6929051,essv6721996,essv6972323;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=10;samples=SSM045,SSM029,SSM035,SSM032,SSM020,SSM023,SSM100,SSM066,SSM046,sample_essv9740424;num_samples_tested=863;frequency=1.16%;num_unique_samples_tested=863;nr_frequency=1.15%;PopulationSummary=European 1:Asian 9:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7963394	7963394	.	.	.	ID=gssv1023;Name=gssv1023;variant_type=CNV;variant_sub_type=Loss;outer_start=7963046;inner_start=7963077;inner_end=7963365;outer_end=7963394;inner_rank=8;num_variants=10;variants=essv6773427,essv9740424,essv6686148,essv6725844,essv6941774,essv6675192,essv6898604,essv6929051,essv6721996,essv6972323;num_studies=2;studies=Wong2012b,Boomsma2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=2;algorithms=PEM,GATK+BreakDancer+Pindel+GenomeSTRiP+CNVnator+123SV+DWAC-seq;num_samples=10;samples=SSM045,SSM029,SSM035,SSM032,SSM020,SSM023,SSM100,SSM066,SSM046,sample_essv9740424;num_samples_tested=863;frequency=1.16%;num_unique_samples_tested=863;nr_frequency=1.15%;PopulationSummary=European 1:Asian 9:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7963167	7963167	.	.	.	ID=gssv1024;Name=gssv1024;variant_type=CNV;variant_sub_type=Loss;outer_start=7963167;inner_start=7963167;inner_end=7963401;outer_end=7963401;inner_rank=8;num_variants=2;variants=nssv3000470,essv6668930;num_studies=2;studies=Wong2012b,Dogan2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=1;algorithms=PEM;num_samples=2;samples=BILGI_BIOE,SSM031;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 0:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	7963167	7963401	.	.	.	ID=gssv1024;Name=gssv1024;variant_type=CNV;variant_sub_type=Loss;outer_start=7963167;inner_start=7963167;inner_end=7963401;outer_end=7963401;inner_rank=8;num_variants=2;variants=nssv3000470,essv6668930;num_studies=2;studies=Wong2012b,Dogan2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=1;algorithms=PEM;num_samples=2;samples=BILGI_BIOE,SSM031;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 0:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	7963401	7963401	.	.	.	ID=gssv1024;Name=gssv1024;variant_type=CNV;variant_sub_type=Loss;outer_start=7963167;inner_start=7963167;inner_end=7963401;outer_end=7963401;inner_rank=8;num_variants=2;variants=nssv3000470,essv6668930;num_studies=2;studies=Wong2012b,Dogan2014;num_platforms=2;platforms=Illumina_GA,Illumina_HiSeq;num_algorithms=1;algorithms=PEM;num_samples=2;samples=BILGI_BIOE,SSM031;num_samples_tested=97;frequency=2.06%;num_unique_samples_tested=97;nr_frequency=2.06%;PopulationSummary=European 0:Asian 1:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 1;
chr1	CNV	copy_number_variation_region	7975281	7975281	.	.	.	ID=gssv1027;Name=gssv1027;variant_type=CNV;variant_sub_type=Loss;outer_start=7975281;inner_start=7975336;inner_end=7978253;outer_end=7978304;inner_rank=8;num_variants=2;variants=essv9847534,essv5580510;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=2;samples=HG01531,HG00159;num_samples_tested=3559;frequency=0.06%;num_unique_samples_tested=2562;nr_frequency=0.07%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7975336	7978253	.	.	.	ID=gssv1027;Name=gssv1027;variant_type=CNV;variant_sub_type=Loss;outer_start=7975281;inner_start=7975336;inner_end=7978253;outer_end=7978304;inner_rank=8;num_variants=2;variants=essv9847534,essv5580510;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=2;samples=HG01531,HG00159;num_samples_tested=3559;frequency=0.06%;num_unique_samples_tested=2562;nr_frequency=0.07%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	7978304	7978304	.	.	.	ID=gssv1027;Name=gssv1027;variant_type=CNV;variant_sub_type=Loss;outer_start=7975281;inner_start=7975336;inner_end=7978253;outer_end=7978304;inner_rank=8;num_variants=2;variants=essv9847534,essv5580510;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=2;samples=HG01531,HG00159;num_samples_tested=3559;frequency=0.06%;num_unique_samples_tested=2562;nr_frequency=0.07%;PopulationSummary=European 2:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8200690	8200690	.	.	.	ID=gssv1038;Name=gssv1038;variant_type=CNV;variant_sub_type=Gain;outer_start=8200690;inner_start=8200707;inner_end=8211256;outer_end=8211256;inner_rank=8;num_variants=42;variants=essv9847618,essv9847619,essv9847620,essv9847621,essv9847622,essv9847623,essv9847624,essv9847625,essv9847626,essv9847627,essv9847628,essv9847629,essv9847630,essv9847631,essv9847632,essv9847633,essv9847634,essv9847635,essv9847636,essv9847637,essv9847638,essv9847639,essv9847640,essv9847641,essv9847642,essv9847643,essv9847644,essv9847645,essv9847646,essv9847647,essv9847648,essv9847649,essv9847650,essv9847651,essv9847652,essv9847653,essv9847654,essv9847655,essv9847656,essv9847657,essv9847658,nssv709644;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=42;samples=HG03888,sample_nssv709644,NA11931,NA20502,NA11831,HG00102,HG01612,NA20900,NA10847,HG00239,HG00334,HG01403,HG00330,NA20510,NA18962,NA12760,HG00185,HG00378,HG01988,NA12830,HG01384,HG00139,HG02337,NA12043,NA11840,HG00380,HG01080,HG00179,HG01669,HG00096,HG00323,NA12004,HG00306,HG00267,HG03826,HG01102,HG01325,NA12778,NA21101,HG01680,HG01188,NA20507;num_samples_tested=4004;frequency=1.05%;num_unique_samples_tested=4004;nr_frequency=1.04%;PopulationSummary=European 29:Asian 3:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 2:SouthAmerican 4:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8200707	8211256	.	.	.	ID=gssv1038;Name=gssv1038;variant_type=CNV;variant_sub_type=Gain;outer_start=8200690;inner_start=8200707;inner_end=8211256;outer_end=8211256;inner_rank=8;num_variants=42;variants=essv9847618,essv9847619,essv9847620,essv9847621,essv9847622,essv9847623,essv9847624,essv9847625,essv9847626,essv9847627,essv9847628,essv9847629,essv9847630,essv9847631,essv9847632,essv9847633,essv9847634,essv9847635,essv9847636,essv9847637,essv9847638,essv9847639,essv9847640,essv9847641,essv9847642,essv9847643,essv9847644,essv9847645,essv9847646,essv9847647,essv9847648,essv9847649,essv9847650,essv9847651,essv9847652,essv9847653,essv9847654,essv9847655,essv9847656,essv9847657,essv9847658,nssv709644;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=42;samples=HG03888,sample_nssv709644,NA11931,NA20502,NA11831,HG00102,HG01612,NA20900,NA10847,HG00239,HG00334,HG01403,HG00330,NA20510,NA18962,NA12760,HG00185,HG00378,HG01988,NA12830,HG01384,HG00139,HG02337,NA12043,NA11840,HG00380,HG01080,HG00179,HG01669,HG00096,HG00323,NA12004,HG00306,HG00267,HG03826,HG01102,HG01325,NA12778,NA21101,HG01680,HG01188,NA20507;num_samples_tested=4004;frequency=1.05%;num_unique_samples_tested=4004;nr_frequency=1.04%;PopulationSummary=European 29:Asian 3:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 2:SouthAmerican 4:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8211256	8211256	.	.	.	ID=gssv1038;Name=gssv1038;variant_type=CNV;variant_sub_type=Gain;outer_start=8200690;inner_start=8200707;inner_end=8211256;outer_end=8211256;inner_rank=8;num_variants=42;variants=essv9847618,essv9847619,essv9847620,essv9847621,essv9847622,essv9847623,essv9847624,essv9847625,essv9847626,essv9847627,essv9847628,essv9847629,essv9847630,essv9847631,essv9847632,essv9847633,essv9847634,essv9847635,essv9847636,essv9847637,essv9847638,essv9847639,essv9847640,essv9847641,essv9847642,essv9847643,essv9847644,essv9847645,essv9847646,essv9847647,essv9847648,essv9847649,essv9847650,essv9847651,essv9847652,essv9847653,essv9847654,essv9847655,essv9847656,essv9847657,essv9847658,nssv709644;num_studies=2;studies=Cooper2011,1000GenomesPhase3;num_platforms=2;platforms=Custom_Illumina_1.2M,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=RD+PEM,Custom_HMM;num_samples=42;samples=HG03888,sample_nssv709644,NA11931,NA20502,NA11831,HG00102,HG01612,NA20900,NA10847,HG00239,HG00334,HG01403,HG00330,NA20510,NA18962,NA12760,HG00185,HG00378,HG01988,NA12830,HG01384,HG00139,HG02337,NA12043,NA11840,HG00380,HG01080,HG00179,HG01669,HG00096,HG00323,NA12004,HG00306,HG00267,HG03826,HG01102,HG01325,NA12778,NA21101,HG01680,HG01188,NA20507;num_samples_tested=4004;frequency=1.05%;num_unique_samples_tested=4004;nr_frequency=1.04%;PopulationSummary=European 29:Asian 3:Mexican 0:African 2:Admixed 0:MiddleEast 0:NativeAmerican 2:NorthAmerican 2:SouthAmerican 4:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8182402	8182402	.	.	.	ID=gssv1039;Name=gssv1039;variant_type=CNV;variant_sub_type=Loss;outer_start=8182402;inner_start=8182439;inner_end=8190870;outer_end=8191375;inner_rank=7;num_variants=117;variants=essv5467236,essv5471431,essv5603109,essv5663474,essv5795918,essv5851511,essv6042179,essv6161910,essv6383717,essv9847544,essv9847545,essv9847546,essv9847547,essv9847548,essv9847549,essv9847550,essv9847551,essv9847552,essv9847553,essv9847554,essv9847555,essv9847556,essv9847557,essv9847558,essv9847559,essv9847560,essv9847561,essv9847562,essv9847563,essv9847564,essv9847565,essv9847566,essv9847567,essv9847568,essv9847569,essv9847570,essv9847571,essv9847572,essv9847573,essv9847574,essv9847575,essv9847576,essv9847577,essv9847578,essv9847579,essv9847580,essv9847581,essv9847582,essv9847583,essv9847584,essv9847585,essv9847586,essv9847587,essv58411,essv5003208,essv5005423,essv5009796,essv5012227,essv5014120,essv5015810,essv5016176,essv5019834,essv5021464,essv5022164,essv5022989,essv5028046,essv5031289,essv5037691,essv5038470,essv5053091,essv5053733,essv5060745,essv5071617,essv5073414,essv5075870,essv5078502,essv5080397,essv5088579,essv5107816,essv5113994,essv5114664,essv5115860,essv5120024,essv5120988,essv5132727,essv5141409,essv5142796,essv5142988,essv5143136,essv5146224,essv5147348,essv5154659,essv5159857,essv64650,nssv1617647,nssv1617658,nssv1617669,nssv1617680,nssv1617691,nssv1617702,essv7004923,essv7004924,essv7004925,essv7004926,essv7004927,essv7004928,essv7004929,essv7004930,essv7004931,essv7004932,essv7004934,essv7004935,essv7004936,essv7004937,essv7004938,essv7004939,essv7004940;num_studies=6;studies=McCarroll2008,Vogler2010,Conrad2009,1000GenomesPhase3,1000GenomesPhase1,Altshuler2010;num_platforms=5;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing,Affymetrix6.0,Affymetrix6.0_Illumina1M;num_algorithms=6;algorithms=PennCNV+Birdseye,PEM+ReadDepth+SplitRead,QuantiSNP+BirdsEye,GADA,BirdsEye,RD+PEM;num_samples=83;samples=NA21317,NA06997,HG03212,HG02536,RW_0253,NA19321,NA19915,HG02756,NA20363,RW_0634,HG01883,NA20296,RW_0098,NA19035,RW_0552,HG01889,NA19109,RW_0626,NA19403,NA19127,HG03172,RW_0129,RW_0234,HG03132,NA21580,NA19154,RW_0155,NA20343,NA21424,NA19352,HG02854,NA20347,NA19153,HG01058,NA19373,NA20297,HG03439,HG02798,NA19701,NA19374,NA19664,HG02585,NA19318,RW_0162,NA21295,NA19702,NA19213,NA19215,NA19704,NA07045,RW_0118,HG02884,RW_0043,NA20288,HG02642,HG03160,NA19313,HG02502,HG02318,HG03063,RW_0013,HG02941,HG03064,HG02583,NA19437,NA21596,HG03124,RW_0174,RW_0220,RW_0190,NA19207,NA19204,NA19205,HG02923,NA19108,NA18933,NA19471,NA18876,NA19107,NA19472,HG02805,RW_0049,RW_0229;num_samples_tested=6162;frequency=1.35%;num_unique_samples_tested=4157;nr_frequency=1.99%;PopulationSummary=European 2:Asian 0:Mexican 1:African 79:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8182439	8190870	.	.	.	ID=gssv1039;Name=gssv1039;variant_type=CNV;variant_sub_type=Loss;outer_start=8182402;inner_start=8182439;inner_end=8190870;outer_end=8191375;inner_rank=7;num_variants=117;variants=essv5467236,essv5471431,essv5603109,essv5663474,essv5795918,essv5851511,essv6042179,essv6161910,essv6383717,essv9847544,essv9847545,essv9847546,essv9847547,essv9847548,essv9847549,essv9847550,essv9847551,essv9847552,essv9847553,essv9847554,essv9847555,essv9847556,essv9847557,essv9847558,essv9847559,essv9847560,essv9847561,essv9847562,essv9847563,essv9847564,essv9847565,essv9847566,essv9847567,essv9847568,essv9847569,essv9847570,essv9847571,essv9847572,essv9847573,essv9847574,essv9847575,essv9847576,essv9847577,essv9847578,essv9847579,essv9847580,essv9847581,essv9847582,essv9847583,essv9847584,essv9847585,essv9847586,essv9847587,essv58411,essv5003208,essv5005423,essv5009796,essv5012227,essv5014120,essv5015810,essv5016176,essv5019834,essv5021464,essv5022164,essv5022989,essv5028046,essv5031289,essv5037691,essv5038470,essv5053091,essv5053733,essv5060745,essv5071617,essv5073414,essv5075870,essv5078502,essv5080397,essv5088579,essv5107816,essv5113994,essv5114664,essv5115860,essv5120024,essv5120988,essv5132727,essv5141409,essv5142796,essv5142988,essv5143136,essv5146224,essv5147348,essv5154659,essv5159857,essv64650,nssv1617647,nssv1617658,nssv1617669,nssv1617680,nssv1617691,nssv1617702,essv7004923,essv7004924,essv7004925,essv7004926,essv7004927,essv7004928,essv7004929,essv7004930,essv7004931,essv7004932,essv7004934,essv7004935,essv7004936,essv7004937,essv7004938,essv7004939,essv7004940;num_studies=6;studies=McCarroll2008,Vogler2010,Conrad2009,1000GenomesPhase3,1000GenomesPhase1,Altshuler2010;num_platforms=5;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing,Affymetrix6.0,Affymetrix6.0_Illumina1M;num_algorithms=6;algorithms=PennCNV+Birdseye,PEM+ReadDepth+SplitRead,QuantiSNP+BirdsEye,GADA,BirdsEye,RD+PEM;num_samples=83;samples=NA21317,NA06997,HG03212,HG02536,RW_0253,NA19321,NA19915,HG02756,NA20363,RW_0634,HG01883,NA20296,RW_0098,NA19035,RW_0552,HG01889,NA19109,RW_0626,NA19403,NA19127,HG03172,RW_0129,RW_0234,HG03132,NA21580,NA19154,RW_0155,NA20343,NA21424,NA19352,HG02854,NA20347,NA19153,HG01058,NA19373,NA20297,HG03439,HG02798,NA19701,NA19374,NA19664,HG02585,NA19318,RW_0162,NA21295,NA19702,NA19213,NA19215,NA19704,NA07045,RW_0118,HG02884,RW_0043,NA20288,HG02642,HG03160,NA19313,HG02502,HG02318,HG03063,RW_0013,HG02941,HG03064,HG02583,NA19437,NA21596,HG03124,RW_0174,RW_0220,RW_0190,NA19207,NA19204,NA19205,HG02923,NA19108,NA18933,NA19471,NA18876,NA19107,NA19472,HG02805,RW_0049,RW_0229;num_samples_tested=6162;frequency=1.35%;num_unique_samples_tested=4157;nr_frequency=1.99%;PopulationSummary=European 2:Asian 0:Mexican 1:African 79:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8191375	8191375	.	.	.	ID=gssv1039;Name=gssv1039;variant_type=CNV;variant_sub_type=Loss;outer_start=8182402;inner_start=8182439;inner_end=8190870;outer_end=8191375;inner_rank=7;num_variants=117;variants=essv5467236,essv5471431,essv5603109,essv5663474,essv5795918,essv5851511,essv6042179,essv6161910,essv6383717,essv9847544,essv9847545,essv9847546,essv9847547,essv9847548,essv9847549,essv9847550,essv9847551,essv9847552,essv9847553,essv9847554,essv9847555,essv9847556,essv9847557,essv9847558,essv9847559,essv9847560,essv9847561,essv9847562,essv9847563,essv9847564,essv9847565,essv9847566,essv9847567,essv9847568,essv9847569,essv9847570,essv9847571,essv9847572,essv9847573,essv9847574,essv9847575,essv9847576,essv9847577,essv9847578,essv9847579,essv9847580,essv9847581,essv9847582,essv9847583,essv9847584,essv9847585,essv9847586,essv9847587,essv58411,essv5003208,essv5005423,essv5009796,essv5012227,essv5014120,essv5015810,essv5016176,essv5019834,essv5021464,essv5022164,essv5022989,essv5028046,essv5031289,essv5037691,essv5038470,essv5053091,essv5053733,essv5060745,essv5071617,essv5073414,essv5075870,essv5078502,essv5080397,essv5088579,essv5107816,essv5113994,essv5114664,essv5115860,essv5120024,essv5120988,essv5132727,essv5141409,essv5142796,essv5142988,essv5143136,essv5146224,essv5147348,essv5154659,essv5159857,essv64650,nssv1617647,nssv1617658,nssv1617669,nssv1617680,nssv1617691,nssv1617702,essv7004923,essv7004924,essv7004925,essv7004926,essv7004927,essv7004928,essv7004929,essv7004930,essv7004931,essv7004932,essv7004934,essv7004935,essv7004936,essv7004937,essv7004938,essv7004939,essv7004940;num_studies=6;studies=McCarroll2008,Vogler2010,Conrad2009,1000GenomesPhase3,1000GenomesPhase1,Altshuler2010;num_platforms=5;platforms=Illumina_II_IIX_HiSeq,NimbleGen42M,Multiple_NGS_Sequencing,Affymetrix6.0,Affymetrix6.0_Illumina1M;num_algorithms=6;algorithms=PennCNV+Birdseye,PEM+ReadDepth+SplitRead,QuantiSNP+BirdsEye,GADA,BirdsEye,RD+PEM;num_samples=83;samples=NA21317,NA06997,HG03212,HG02536,RW_0253,NA19321,NA19915,HG02756,NA20363,RW_0634,HG01883,NA20296,RW_0098,NA19035,RW_0552,HG01889,NA19109,RW_0626,NA19403,NA19127,HG03172,RW_0129,RW_0234,HG03132,NA21580,NA19154,RW_0155,NA20343,NA21424,NA19352,HG02854,NA20347,NA19153,HG01058,NA19373,NA20297,HG03439,HG02798,NA19701,NA19374,NA19664,HG02585,NA19318,RW_0162,NA21295,NA19702,NA19213,NA19215,NA19704,NA07045,RW_0118,HG02884,RW_0043,NA20288,HG02642,HG03160,NA19313,HG02502,HG02318,HG03063,RW_0013,HG02941,HG03064,HG02583,NA19437,NA21596,HG03124,RW_0174,RW_0220,RW_0190,NA19207,NA19204,NA19205,HG02923,NA19108,NA18933,NA19471,NA18876,NA19107,NA19472,HG02805,RW_0049,RW_0229;num_samples_tested=6162;frequency=1.35%;num_unique_samples_tested=4157;nr_frequency=1.99%;PopulationSummary=European 2:Asian 0:Mexican 1:African 79:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 1:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8202357	8202357	.	.	.	ID=gssv1040;Name=gssv1040;variant_type=CNV;variant_sub_type=Gain;outer_start=8202357;inner_start=8204117;inner_end=8211025;outer_end=8211127;inner_rank=7;num_variants=6;variants=essv62020,essv7030856,essv7030967,essv7031078,essv74612,essv51446;num_studies=2;studies=Vogler2010,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,GADA;num_samples=6;samples=NA11931,SW_1166,SW_0568,NA12239,SW_1045,NA12004;num_samples_tested=1149;frequency=0.52%;num_unique_samples_tested=1149;nr_frequency=0.52%;PopulationSummary=European 6:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8204117	8211025	.	.	.	ID=gssv1040;Name=gssv1040;variant_type=CNV;variant_sub_type=Gain;outer_start=8202357;inner_start=8204117;inner_end=8211025;outer_end=8211127;inner_rank=7;num_variants=6;variants=essv62020,essv7030856,essv7030967,essv7031078,essv74612,essv51446;num_studies=2;studies=Vogler2010,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,GADA;num_samples=6;samples=NA11931,SW_1166,SW_0568,NA12239,SW_1045,NA12004;num_samples_tested=1149;frequency=0.52%;num_unique_samples_tested=1149;nr_frequency=0.52%;PopulationSummary=European 6:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8211127	8211127	.	.	.	ID=gssv1040;Name=gssv1040;variant_type=CNV;variant_sub_type=Gain;outer_start=8202357;inner_start=8204117;inner_end=8211025;outer_end=8211127;inner_rank=7;num_variants=6;variants=essv62020,essv7030856,essv7030967,essv7031078,essv74612,essv51446;num_studies=2;studies=Vogler2010,Conrad2009;num_platforms=2;platforms=NimbleGen42M,Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,GADA;num_samples=6;samples=NA11931,SW_1166,SW_0568,NA12239,SW_1045,NA12004;num_samples_tested=1149;frequency=0.52%;num_unique_samples_tested=1149;nr_frequency=0.52%;PopulationSummary=European 6:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8206130	8206130	.	.	.	ID=gssv1042;Name=gssv1042;variant_type=CNV;variant_sub_type=Gain;outer_start=8206130;inner_start=8206130;inner_end=8209321;outer_end=8209321;inner_rank=16;num_variants=16;variants=essv7031190,essv7031301,essv7031412,nssv1656568,nssv1656569,nssv1656570,nssv1656571,nssv1656572,nssv1656573,nssv1656574,nssv1656575,nssv1656576,nssv1656577,nssv1656578,nssv1656579,nssv1656580;num_studies=2;studies=McCarroll2008,Vogler2010;num_platforms=1;platforms=Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,BirdsEye;num_samples=16;samples=SW_1057,NA12146,NA10854,NA12004,NA07022,NA12043,NA10857,NA12155,NA12752,NA11831,NA07019,NA12239,SW_1111,NA11840,SW_1127,NA12236;num_samples_tested=1379;frequency=1.16%;num_unique_samples_tested=1379;nr_frequency=1.16%;PopulationSummary=European 16:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8206130	8209321	.	.	.	ID=gssv1042;Name=gssv1042;variant_type=CNV;variant_sub_type=Gain;outer_start=8206130;inner_start=8206130;inner_end=8209321;outer_end=8209321;inner_rank=16;num_variants=16;variants=essv7031190,essv7031301,essv7031412,nssv1656568,nssv1656569,nssv1656570,nssv1656571,nssv1656572,nssv1656573,nssv1656574,nssv1656575,nssv1656576,nssv1656577,nssv1656578,nssv1656579,nssv1656580;num_studies=2;studies=McCarroll2008,Vogler2010;num_platforms=1;platforms=Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,BirdsEye;num_samples=16;samples=SW_1057,NA12146,NA10854,NA12004,NA07022,NA12043,NA10857,NA12155,NA12752,NA11831,NA07019,NA12239,SW_1111,NA11840,SW_1127,NA12236;num_samples_tested=1379;frequency=1.16%;num_unique_samples_tested=1379;nr_frequency=1.16%;PopulationSummary=European 16:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8209321	8209321	.	.	.	ID=gssv1042;Name=gssv1042;variant_type=CNV;variant_sub_type=Gain;outer_start=8206130;inner_start=8206130;inner_end=8209321;outer_end=8209321;inner_rank=16;num_variants=16;variants=essv7031190,essv7031301,essv7031412,nssv1656568,nssv1656569,nssv1656570,nssv1656571,nssv1656572,nssv1656573,nssv1656574,nssv1656575,nssv1656576,nssv1656577,nssv1656578,nssv1656579,nssv1656580;num_studies=2;studies=McCarroll2008,Vogler2010;num_platforms=1;platforms=Affymetrix6.0;num_algorithms=2;algorithms=PennCNV+Birdseye,BirdsEye;num_samples=16;samples=SW_1057,NA12146,NA10854,NA12004,NA07022,NA12043,NA10857,NA12155,NA12752,NA11831,NA07019,NA12239,SW_1111,NA11840,SW_1127,NA12236;num_samples_tested=1379;frequency=1.16%;num_unique_samples_tested=1379;nr_frequency=1.16%;PopulationSummary=European 16:Asian 0:Mexican 0:African 0:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8185308	8185308	.	.	.	ID=gssv1043;Name=gssv1043;variant_type=CNV;variant_sub_type=Loss;outer_start=8185308;inner_start=8185308;inner_end=8186282;outer_end=8186291;inner_rank=8;num_variants=31;variants=essv9847588,essv9847589,essv9847590,essv9847591,essv9847592,essv9847593,essv9847594,essv9847595,essv9847596,essv9847597,essv9847598,essv9847599,essv9847600,essv9847601,essv9847602,essv9847603,essv9847604,essv9847605,essv9847606,essv9847607,essv9847608,essv9847609,essv9847610,essv9847611,essv9847612,essv9847613,essv9847614,essv9847615,essv9847616,essv9847617,essv5581631;num_studies=2;studies=1000GenomesPhase1,1000GenomesPhase3;num_platforms=2;platforms=Illumina_II_IIX_HiSeq,Multiple_NGS_Sequencing;num_algorithms=2;algorithms=PEM+ReadDepth+SplitRead,RD+PEM;num_samples=31;samples=HG03212,HG01883,HG02756,HG01889,NA19403,HG03172,HG03132,HG02854,HG02502,HG02798,NA19374,HG02585,NA19318,NA19213,NA19704,NA18876,HG02642,HG03160,NA18534,HG03439,HG02318,HG03063,HG02941,HG03064,HG02583,NA19437,HG03124,NA19204,NA19471,NA19107,NA19472;num_samples_tested=3559;frequency=0.87%;num_unique_samples_tested=2562;nr_frequency=1.2%;PopulationSummary=European 0:Asian 1:Mexican 0:African 30:Admixed 0:MiddleEast 0:NativeAmerican 0:NorthAmerican 0:SouthAmerican 0:Oceania 0:Turkey 0;
chr1	CNV	copy_number_variation_region	8185308	8186282	.	.	.	ID=gssv1043;Name=gssv1043;variant_type=CNV;variant_sub_type=Loss;outer_start=8185308;inner_start=8185308;inner_end=8186282;outer_end=8186291;inner_rank=8;num_variants=31;variants=essv9847588,essv9847589,essv9847590,essv9847591,essv9847592,essv9847593,essv9847594,essv9847595,essv9847596,essv9847597,essv9847598,essv9847599,essv9847600,essv9847601,essv9847602,essv9847603,essv9847604,essv9847605,essv9847606,essv9847607,essv9847608,essv9847609,essv9847610,essv9847611,essv