variantaccession chr start end varianttype variantsubtype reference pubmedid method platform mergedvariants supportingvariants mergedorsample frequency samplesize observedgains observedlosses cohortdescription genes samples dgv1n82 1 10001 22118 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv945697,nsv945698 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv7879 1 10001 127330 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv14777,nssv14783,nssv14762,nssv14766,nssv18113,nssv14771,nssv18093,nssv18117,nssv14789,nssv14776,nssv14773,nssv14786,nssv14780,nssv14764,nssv14775,nssv21423,nssv14785,nssv14772,nssv14784,nssv14790,nssv18103,nssv14791,nssv14768,nssv14781,nssv14763,nssv14782,nssv14788,nssv14787,nssv14774,nssv14770 M 31 25 1 "" NA07029,NA07048,NA10839,NA10863,NA12155,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 nsv482937 1 10001 2368561 CNV loss Iafrate_et_al_2004 15286789 BAC aCGH,FISH nssv2995976 M 39 0 1 "" nsv958854 1 10191 10281 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005193 M 1 0 1 "" BILGI_BIOE nsv428112 1 10377 177376 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450130 M 62 1 0 "" HGDP01088 esv27265 1 10499 177368 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20178,esv15038,esv19430,esv17542,esv14423,esv19525,esv16041 M 40 32 6 "" NA06985,NA07037,NA11894,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 dgv1e59 1 11189 36787 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3343481,esv3364878 M 185 2 0 "" NA12878,NA19239 nsv945700 1 22118 22723 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572228,nssv2570974,nssv2572127,nssv2570985,nssv2570996,nssv2571099,nssv2570941,nssv2570952,nssv2570963,nssv2571007,nssv2570930,nssv2571018 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945699 1 22118 35020 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749258,nssv1749211,nssv1755468,nssv1749248,nssv1749265,nssv1749229,nssv1749261,nssv1749236,nssv1755461,nssv1749254,nssv1755480,nssv1749203,nssv1755466,nssv1749204,nssv1755467,nssv1755460,nssv1749260,nssv1749247,nssv1755476,nssv1749221,nssv1755477,nssv1749238,nssv1755473,nssv1749213,nssv1749262,nssv1749209,nssv1755478,nssv1749264,nssv1749263,nssv1749240,nssv1755469,nssv1749233,nssv1749259,nssv1749225,nssv1755465,nssv1749241,nssv1755471,nssv1749232,nssv1749257,nssv1749220,nssv1755463,nssv1749228,nssv1755474,nssv1749255,nssv1755475,nssv1749215,nssv1755464,nssv1749207,nssv1755462,nssv1749217,nssv1755472,nssv1749214,nssv1755479,nssv1749205,nssv1749266,nssv1749244,nssv1749239,nssv1749216,nssv1749231,nssv1749202,nssv1749227,nssv1749249,nssv1749224,nssv1749230,nssv1749242,nssv1749208,nssv1749235,nssv1749243,nssv1749222,nssv1749206,nssv1749246,nssv1749210,nssv1749226,nssv1749237,nssv1749251,nssv1749252,nssv1749219,nssv1749250,nssv1749218,nssv1749253 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945484 1 23661 24819 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572820,nssv2576561,nssv2572962,nssv2576556,nssv2576582,nssv2576555,nssv2572822,nssv2576567,nssv2572827,nssv2576552,nssv2574190,nssv2576562,nssv2576584,nssv2575984,nssv2572861,nssv2576551,nssv2572823,nssv2576565,nssv2573987,nssv2575213,nssv2576583,nssv2570921,nssv2572826,nssv2576549,nssv2576581,nssv2576558,nssv2576585,nssv2576085,nssv2570920,nssv2576574,nssv2572830,nssv2576579,nssv2570922,nssv2575221,nssv2576580,nssv2575220,nssv2570923,nssv2572738,nssv2574088,nssv2575218,nssv2572824,nssv2576568,nssv2575208,nssv2576572,nssv2575209,nssv2575212,nssv2572828,nssv2576570,nssv2572829,nssv2575237,nssv2575188,nssv2576186,nssv2572831,nssv2576557,nssv2572821,nssv2575211,nssv2575440,nssv2576571,nssv2576548,nssv2576550,nssv2575214,nssv2575338,nssv2576560,nssv2576569,nssv2576578,nssv2576573,nssv2576554,nssv2575224,nssv2575210,nssv2575219,nssv2575215,nssv2575223,nssv2576563,nssv2575217,nssv2575222,nssv2576547,nssv2576559,nssv2576576,nssv2576577,nssv2576566 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv469759 1 27980 177346 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1672641,nssv1676217,nssv1674071,nssv1675941,nssv1672301,nssv1673181,nssv1674201,nssv1673526,nssv1676076,nssv1675044,nssv1673353,nssv1675415,nssv1672137,nssv1675248 M 265 14 0 "" nsv471591 1 27981 177346 CNV loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550435,nssv550437,nssv550436,nssv550438 M 48 0 4 "" NA10492,NA10970,NA10971,NA17051 esv3433926 1 28989 35387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692083 M 185 1 0 "" NA12892 nsv945486 1 30626 35020 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570953,nssv2570970,nssv2570977,nssv2570942,nssv2570961,nssv2570958,nssv2570964,nssv2570945,nssv2570944,nssv2570962,nssv2570960,nssv2570976,nssv2570929,nssv2570935,nssv2570957,nssv2570951,nssv2570948,nssv2570927,nssv2570936,nssv2570954,nssv2570933,nssv2570928,nssv2570932,nssv2570972,nssv2570973,nssv2570965,nssv2570966,nssv2570946,nssv2570940,nssv2570943,nssv2570967,nssv2570971,nssv2570975,nssv2570956,nssv2570949,nssv2570925,nssv2570968,nssv2570938,nssv2570969,nssv2570955,nssv2570947,nssv2570950,nssv2570937,nssv2570934,nssv2570959,nssv2570926,nssv2570939,nssv2570931 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945487 1 35020 41109 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570983,nssv2570978,nssv2570979,nssv2570981,nssv2570982,nssv2570988,nssv2570989,nssv2570980,nssv2570984,nssv2570987,nssv2570986 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3411655 1 37489 43587 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692270 M 185 1 0 "" NA19238 esv3430433 1 38889 40687 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692283 M 185 1 0 "" NA12878 esv3368735 1 44989 51487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692302 M 185 1 0 "" NA19238 dgv1n54 1 45531 121042 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544868,nsv544866,nsv544869 M 17421 0 3 "" esv3369077 1 45789 46987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692306 M 185 1 0 "" NA19239 esv3428396 1 45889 53987 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692307 M 185 1 0 "" NA19240 nsv951399 1 46501 71800 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997203 M 1 1 0 "" BILGI_BIOE esv3439865 1 47689 51487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692320 M 185 1 0 "" NA19239 nsv544867 1 49298 82154 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707617,nssv707616 M 17421 1 1 "" esv3335281 1 52089 54387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692333 M 185 1 0 "" NA19238 nsv437198 1 55394 86303 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467079 M 60 0 1 "" NA19208 dgv2e59 1 63489 66287 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3333057,esv3353898 M 185 2 0 "" NA19238,NA19240 nsv437859 1 66008 79078 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv467740,nssv471090,nssv470979,nssv471423,nssv471312,nssv468851,nssv469962,nssv471201 M 269 0 8 "" NA10831,NA10857,NA12044,NA12155,NA18912,NA18914,NA19207,NA19208 dgv3e59 1 66789 68887 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3441117,esv3341557,esv3366041 M 185 3 0 "" NA19238,NA19239,NA19240 nsv514929 1 68497 70627 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2858896,nssv2864107,nssv2867174,nssv2862317,nssv2859842,nssv2860951,nssv2863340,nssv2865146,nssv2863741,nssv2865521,nssv2865098,nssv2861660,nssv2858870,nssv2863165,nssv2864356,nssv2860681,nssv2864825,nssv2858735,nssv2862506,nssv2863060,nssv2864968,nssv2865669,nssv2866100,nssv2862349,nssv2868265,nssv2864223,nssv2859869,nssv2858559,nssv2862291,nssv2861172,nssv2867664,nssv2866062,nssv2864124,nssv2859332,nssv2867462,nssv2862650,nssv2859301,nssv2864712,nssv2861368,nssv2861708,nssv2859630,nssv2859388,nssv2865034,nssv2866045,nssv2859135,nssv2865957,nssv2865628,nssv2859426,nssv2864750,nssv2867544,nssv2863565,nssv2860153,nssv2863950,nssv2861154,nssv2860984,nssv2868423,nssv2858866,nssv2867827,nssv2866655,nssv2860187,nssv2860343,nssv2864999,nssv2866234,nssv2860747,nssv2861997,nssv2860210,nssv2864820,nssv2868296,nssv2866178,nssv2864647,nssv2866509,nssv2864900,nssv2862087,nssv2865284,nssv2867452,nssv2860286,nssv2859927,nssv2865874,nssv2863010,nssv2859712,nssv2859693,nssv2858768,nssv2862501,nssv2864331,nssv2864340,nssv2866198,nssv2865937,nssv2859104,nssv2860687,nssv2864852,nssv2859384,nssv2859448,nssv2859540,nssv2866470,nssv2862299,nssv2861909,nssv2865147,nssv2864277,nssv2863089,nssv2861190,nssv2868454,nssv2867650,nssv2865279,nssv2862898,nssv2866508,nssv2858675,nssv2863459,nssv2860563,nssv2859864,nssv2865588,nssv2861367,nssv2867361,nssv2862824,nssv2865611,nssv2861250,nssv2859331,nssv2861485,nssv2865947,nssv2863085,nssv2867670,nssv2858755,nssv2860629,nssv2862365,nssv2861727,nssv2863563,nssv2859613,nssv2863842,nssv2866560,nssv2860020,nssv2863993,nssv2868486,nssv2867901,nssv2863855,nssv2866378,nssv2866673,nssv2862362,nssv2862080,nssv2864878,nssv2860077,nssv2866559,nssv2863363,nssv2864621,nssv2862868,nssv2866382,nssv2859300,nssv2861308,nssv2867619,nssv2862385,nssv2860437,nssv2867504,nssv2862350,nssv2861262,nssv2866480,nssv2867078,nssv2862192,nssv2867224,nssv2867263,nssv2867588,nssv2860422,nssv2860233,nssv2866855,nssv2861677,nssv2867651,nssv2866507,nssv2859063,nssv2863065,nssv2858825,nssv2865753,nssv2863257,nssv2866214,nssv2867485,nssv2866778,nssv2862006,nssv2862079,nssv2864843,nssv2862138,nssv2866887,nssv2866371,nssv2867615,nssv2868077,nssv2863617,nssv2860704,nssv2866252,nssv2864983,nssv2867920,nssv2862096,nssv2858575,nssv2862970,nssv2867399,nssv2863102,nssv2865484,nssv2859644,nssv2858884,nssv2865228,nssv2868166,nssv2865754,nssv2862796,nssv2858788,nssv2866786,nssv2866813,nssv2861611,nssv2863101,nssv2860242,nssv2860873,nssv2863666,nssv2859451,nssv2865749,nssv2864526,nssv2860690,nssv2865293,nssv2866282,nssv2861048,nssv2866307,nssv2859290,nssv2862733,nssv2861540,nssv2862589,nssv2864859,nssv2865815,nssv2864238,nssv2863591,nssv2859788,nssv2858700,nssv2862869,nssv2865160,nssv2866438,nssv2858883,nssv2868137,nssv2866706,nssv2859094,nssv2861598,nssv2867969,nssv2866593,nssv2860254,nssv2866018,nssv2861109,nssv2867938,nssv2863568,nssv2862159,nssv2867781,nssv2863709,nssv2868351,nssv2860335,nssv2867549,nssv2863278,nssv2863944,nssv2865409,nssv2863543,nssv2868209,nssv2864873,nssv2867728,nssv2861378,nssv2867343,nssv2860526,nssv2865860,nssv2863214,nssv2860682,nssv2867259,nssv2861553,nssv2864864,nssv2862492,nssv2859125,nssv2858633,nssv2862848,nssv2859667,nssv2860377,nssv2867841,nssv2867539,nssv2863237,nssv2865827,nssv2860722,nssv2866078,nssv2860672,nssv2865555,nssv2865928,nssv2860942,nssv2864702,nssv2865483,nssv2867596,nssv2868183,nssv2858572,nssv2863719,nssv2859883,nssv2866676,nssv2860032,nssv2867418,nssv2863896,nssv2867068,nssv2860945,nssv2860178,nssv2865735,nssv2864118,nssv2860627,nssv2860365,nssv2863524,nssv2863432,nssv2861327,nssv2860038,nssv2866448,nssv2867681,nssv2866269,nssv2860333,nssv2866623,nssv2866359,nssv2868096,nssv2862812,nssv2867294,nssv2864246,nssv2860788,nssv2865643,nssv2859489,nssv2861561,nssv2861581,nssv2860595,nssv2867787,nssv2863400,nssv2858998,nssv2859547,nssv2868000,nssv2865029,nssv2861240,nssv2862036,nssv2865417,nssv2867226,nssv2862223,nssv2859680,nssv2860253,nssv2864540,nssv2861512,nssv2865168,nssv2860124,nssv2864020,nssv2861958,nssv2862715,nssv2860832,nssv2861515,nssv2863069,nssv2862538,nssv2864418,nssv2864991,nssv2862935,nssv2867535,nssv2860623,nssv2860399,nssv2864295,nssv2862633,nssv2868108,nssv2864949,nssv2859022,nssv2860789,nssv2859964,nssv2867208,nssv2864902,nssv2863475,nssv2866514,nssv2864744,nssv2861101,nssv2863788,nssv2864910,nssv2858540,nssv2866245,nssv2866940,nssv2864218,nssv2864915,nssv2861924,nssv2858702,nssv2862199,nssv2868005,nssv2861396,nssv2863379,nssv2859914,nssv2861479,nssv2867410,nssv2867381,nssv2860024,nssv2862436,nssv2862930,nssv2860212,nssv2863454,nssv2868431,nssv2864672,nssv2858941,nssv2867849,nssv2866377,nssv2859274,nssv2863393,nssv2867616,nssv2866294,nssv2867142,nssv2860971,nssv2866148,nssv2864208,nssv2866710,nssv2864530,nssv2860772,nssv2864501,nssv2860838,nssv2865964,nssv2864123,nssv2862825,nssv2858528,nssv2867258,nssv2868367,nssv2863164,nssv2858799,nssv2868419,nssv2859968,nssv2859204,nssv2859048,nssv2859117,nssv2867808,nssv2864040,nssv2866522,nssv2864517,nssv2859776,nssv2864239,nssv2860819,nssv2862780,nssv2867088,nssv2859919,nssv2865040,nssv2867398,nssv2866610,nssv2863485,nssv2859541,nssv2864317,nssv2866290,nssv2865664,nssv2867873,nssv2867583,nssv2859861,nssv2862418,nssv2862629,nssv2863356,nssv2862788,nssv2862335,nssv2865468,nssv2867083,nssv2867603,nssv2862647,nssv2859079,nssv2860935,nssv2865361,nssv2863149,nssv2860673,nssv2868413,nssv2866257,nssv2864514,nssv2861618,nssv2862774,nssv2865513,nssv2863171,nssv2863732,nssv2865003,nssv2862690,nssv2860782,nssv2862601,nssv2863605,nssv2866525,nssv2859105,nssv2860715,nssv2865129,nssv2860825,nssv2859934,nssv2865011,nssv2859822,nssv2867498,nssv2860414,nssv2865665,nssv2867567,nssv2858644,nssv2859913,nssv2864815,nssv2868151,nssv2859496,nssv2861962,nssv2867562,nssv2858615,nssv2863534,nssv2862713,nssv2861391,nssv2861183,nssv2864784,nssv2865841,nssv2865369,nssv2863552,nssv2861692,nssv2865416 M 2366 488 0 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv544870 1 73202 137452 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707620 M 17421 0 1 "" nsv945701 1 77882 88084 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750684,nssv1749298,nssv1749281,nssv1749405,nssv1749287,nssv1750551,nssv1749271,nssv1749326,nssv1749275,nssv1750584,nssv1749277,nssv1749427,nssv1750607,nssv1750440,nssv1749273,nssv1749350,nssv1749285,nssv1749294,nssv1749270,nssv1749361,nssv1749274,nssv1750529,nssv1749269,nssv1749372,nssv1749288,nssv1750518,nssv1750640,nssv1750573,nssv1750662,nssv1749306,nssv1750651,nssv1749394,nssv1749283,nssv1749301,nssv1749286,nssv1749299,nssv1749280,nssv1749291,nssv1749282,nssv1749292,nssv1749272,nssv1749472,nssv1750596,nssv1749315,nssv1749284,nssv1749297,nssv1749279,nssv1750507,nssv1750695,nssv1749461,nssv1749276,nssv1750462,nssv1750618,nssv1750473,nssv1750629,nssv1749307,nssv1749416,nssv1749308,nssv1750562,nssv1750451,nssv1749303,nssv1749268,nssv1749305,nssv1749293,nssv1750496,nssv1749383,nssv1749483,nssv1749296,nssv1750673,nssv1749290,nssv1749339,nssv1749295,nssv1750540,nssv1750418,nssv1749304,nssv1749302,nssv1750485,nssv1749438,nssv1750429,nssv1749450 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945702 1 88084 91317 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751756,nssv1751738,nssv1751653,nssv1751763,nssv1751719,nssv1751764,nssv1751742,nssv1751760,nssv1751737,nssv1751744,nssv1751750,nssv1751675,nssv1751749,nssv1751751,nssv1751735,nssv1751740,nssv1751664,nssv1750718,nssv1751748,nssv1751739,nssv1751697,nssv1751708,nssv1751771,nssv1751768,nssv1751755,nssv1751734,nssv1751773,nssv1751757,nssv1751758,nssv1751753,nssv1751767,nssv1751745,nssv1751770,nssv1751733,nssv1751752,nssv1751762,nssv1751761,nssv1751759,nssv1751747,nssv1751736,nssv1751686,nssv1751746,nssv1751766,nssv1751772,nssv1750707,nssv1751741,nssv1751730,nssv1751769 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv161172 1 88190 89153 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179750 M 24 "" nsv945705 1 91317 93605 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571100,nssv2568033,nssv2570997,nssv2568837,nssv2568830,nssv2571019,nssv2570998,nssv2571065,nssv2568836,nssv2571022,nssv2568833,nssv2568835,nssv2571004,nssv2571011,nssv2568030,nssv2571054,nssv2568832,nssv2568839,nssv2570993,nssv2571002,nssv2571076,nssv2568838,nssv2568844,nssv2571009,nssv2571017,nssv2571020,nssv2571032,nssv2571043,nssv2571015,nssv2570994,nssv2571005,nssv2568843,nssv2571013,nssv2571111,nssv2568036,nssv2571021,nssv2571016,nssv2571122,nssv2568834,nssv2568841,nssv2568840,nssv2571087,nssv2571012,nssv2570999,nssv2571014,nssv2568846,nssv2568035,nssv2568034,nssv2571003,nssv2568032,nssv2568831,nssv2571008,nssv2568845,nssv2568031,nssv2571006,nssv2571000,nssv2571010,nssv2568842,nssv2571001,nssv2570995 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945704 1 91317 125400 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751778,nssv1751829,nssv1751853,nssv1751797,nssv1751784,nssv1751841,nssv1751783,nssv1751818,nssv1751789,nssv1751842,nssv1751793,nssv1751819,nssv1751852,nssv1751825,nssv1751777,nssv1751851,nssv1751796,nssv1751809,nssv1751859,nssv1751800,nssv1751785,nssv1751848,nssv1751795,nssv1751828,nssv1751856,nssv1751830,nssv1751786,nssv1751849,nssv1751780,nssv1751822,nssv1751861,nssv1751816,nssv1751790,nssv1751838,nssv1751794,nssv1751774,nssv1751857,nssv1751860,nssv1751775,nssv1751827,nssv1751782,nssv1751805,nssv1751858,nssv1751806,nssv1751781,nssv1751813,nssv1751862,nssv1751847,nssv1751855,nssv1751817,nssv1751791,nssv1751846,nssv1751779,nssv1751803,nssv1751792,nssv1751814,nssv1751850,nssv1751844,nssv1751798,nssv1751807,nssv1751833,nssv1751826,nssv1751812,nssv1751840,nssv1751835,nssv1751804,nssv1751839,nssv1751815,nssv1751802,nssv1751834,nssv1751845,nssv1751811,nssv1751823,nssv1751831,nssv1751824,nssv1751836,nssv1751837,nssv1751820,nssv1751801,nssv1751808 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv4e59 1 91589 98387 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3411984,esv3379005 M 185 2 0 "" NA19239,NA19240 nsv951073 1 93001 116200 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997314 M 1 1 0 "" BILGI_BIOE nsv945494 1 93605 95437 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569978,nssv2568988,nssv2568849,nssv2569120,nssv2568900,nssv2568859,nssv2570000,nssv2568854,nssv2569989,nssv2569054,nssv2568862,nssv2569076,nssv2568855,nssv2569065,nssv2568857,nssv2568856,nssv2568861,nssv2568851,nssv2569087,nssv2568850,nssv2569098,nssv2568853,nssv2568922,nssv2568858,nssv2569131,nssv2568860,nssv2568852,nssv2568933,nssv2569010,nssv2568911,nssv2568863,nssv2568868,nssv2568848,nssv2569043,nssv2568977,nssv2568878,nssv2568864,nssv2569021,nssv2569109,nssv2568889,nssv2568866,nssv2568955,nssv2568966,nssv2568999,nssv2568847,nssv2568867,nssv2568865,nssv2569032,nssv2568944 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3436859 1 93889 96487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692418 M 185 1 0 "" NA19238 nsv945495 1 95437 96652 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570275,nssv2571175,nssv2571177,nssv2571183,nssv2571168,nssv2570110,nssv2570264,nssv2571169,nssv2571189,nssv2570231,nssv2571173,nssv2571182,nssv2570077,nssv2570154,nssv2571184,nssv2570242,nssv2571188,nssv2570044,nssv2571170,nssv2571160,nssv2571185,nssv2571180,nssv2571187,nssv2570209,nssv2571174,nssv2571171,nssv2570022,nssv2570176,nssv2570165,nssv2570033,nssv2570143,nssv2570088,nssv2570220,nssv2570198,nssv2571178,nssv2571176,nssv2571179,nssv2570055,nssv2570066,nssv2570253,nssv2571172,nssv2571186,nssv2570011,nssv2570099,nssv2570121,nssv2571190,nssv2570132,nssv2570187,nssv2571181 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945496 1 96652 98749 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571224,nssv2571221,nssv2571234,nssv2571202,nssv2571237,nssv2571209,nssv2571195,nssv2571192,nssv2571208,nssv2571225,nssv2571214,nssv2571205,nssv2571231,nssv2571219,nssv2571201,nssv2571203,nssv2571218,nssv2571210,nssv2571198,nssv2571191,nssv2571232,nssv2571216,nssv2571200,nssv2571228,nssv2571227,nssv2571233,nssv2571193,nssv2571213,nssv2571223,nssv2571197,nssv2571211,nssv2571212,nssv2571239,nssv2571229,nssv2571230,nssv2571207,nssv2571196,nssv2571222,nssv2571235,nssv2571215,nssv2571206,nssv2571194,nssv2571226,nssv2571238,nssv2571220,nssv2571217,nssv2571204,nssv2571236,nssv2571199 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945498 1 98749 105358 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571252,nssv2571259,nssv2571253,nssv2571250,nssv2571279,nssv2571283,nssv2571242,nssv2571264,nssv2571284,nssv2571281,nssv2571260,nssv2571270,nssv2571276,nssv2571244,nssv2571247,nssv2571280,nssv2571274,nssv2571265,nssv2571245,nssv2571277,nssv2571278,nssv2571287,nssv2571251,nssv2571256,nssv2571254,nssv2571257,nssv2571241,nssv2571261,nssv2571285,nssv2571255,nssv2571258,nssv2571249,nssv2571272,nssv2571267,nssv2571282,nssv2571263,nssv2571268,nssv2571246,nssv2571275,nssv2571288,nssv2571262,nssv2571266,nssv2571271,nssv2571269,nssv2571273,nssv2571286,nssv2571243,nssv2571248 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3431809 1 99689 100887 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692423 M 185 1 0 "" NA19240 dgv5e59 1 103089 105787 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3329998,esv3336840 M 185 2 0 "" NA19239,NA19240 nsv945500 1 105358 120257 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571303,nssv2571293,nssv2571331,nssv2571318,nssv2571327,nssv2571309,nssv2571324,nssv2571292,nssv2571304,nssv2571326,nssv2571308,nssv2571330,nssv2571298,nssv2571311,nssv2571297,nssv2571325,nssv2571316,nssv2571300,nssv2571328,nssv2571333,nssv2571305,nssv2571361,nssv2571313,nssv2571294,nssv2571290,nssv2571319,nssv2571339,nssv2571301,nssv2571291,nssv2571329,nssv2571321,nssv2571332,nssv2571307,nssv2571296,nssv2571314,nssv2571315,nssv2571306,nssv2571322,nssv2571310,nssv2571320,nssv2571323,nssv2571350,nssv2571312,nssv2571299,nssv2571372,nssv2571302,nssv2571317,nssv2571295 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv6e59 1 106789 109187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3427619,esv3349278 M 185 2 0 "" NA19238,NA19239 esv3441565 1 106789 111287 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692436 M 185 1 0 "" NA19240 esv3335040 1 109889 111187 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692439 M 185 1 0 "" NA19239 nsv945503 1 120257 124525 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572461,nssv2573627,nssv2572417,nssv2573671,nssv2573693,nssv2572604,nssv2573748,nssv2571416,nssv2572670,nssv2572615,nssv2571394,nssv2571427,nssv2572494,nssv2573759,nssv2573737,nssv2573704,nssv2572395,nssv2573770,nssv2572571,nssv2572516,nssv2572450,nssv2573682,nssv2572527,nssv2572659,nssv2573715,nssv2572582,nssv2573660,nssv2573638,nssv2571438,nssv2571405,nssv2572472,nssv2571449,nssv2572593,nssv2572439,nssv2573649,nssv2572648,nssv2572637,nssv2572560,nssv2572505,nssv2572626,nssv2572428,nssv2573726,nssv2572692,nssv2572681,nssv2572538,nssv2572483,nssv2572549,nssv2572406,nssv2571460 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv2n54 1 121042 137674 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544871,nsv544872 M 17421 0 2 "" nsv544873 1 121042 170730 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707623 M 17421 1 0 "" nsv945707 1 125400 129243 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573789,nssv2573816,nssv2573795,nssv2573837,nssv2573802,nssv2573812,nssv2573853,nssv2573806,nssv2573788,nssv2573813,nssv2573796,nssv2573851,nssv2573793,nssv2573852,nssv2573858,nssv2573811,nssv2573799,nssv2573824,nssv2573790,nssv2573834,nssv2573857,nssv2573841,nssv2573797,nssv2573829,nssv2573798,nssv2573822,nssv2573861,nssv2573832,nssv2573791,nssv2573818,nssv2573785,nssv2573842,nssv2573854,nssv2573817,nssv2573784,nssv2573844,nssv2573792,nssv2573807,nssv2573786,nssv2573839,nssv2573787,nssv2573804,nssv2573862,nssv2573831,nssv2573856,nssv2573815,nssv2573794,nssv2573828,nssv2573855,nssv2573821,nssv2573800,nssv2573820,nssv2573801,nssv2573859,nssv2573803,nssv2573809,nssv2573845,nssv2573826,nssv2573849,nssv2573846,nssv2573848,nssv2573819,nssv2573805,nssv2573810,nssv2573823,nssv2573843,nssv2573838,nssv2573781,nssv2573814,nssv2573863,nssv2573833,nssv2573808,nssv2573835,nssv2573840,nssv2573825,nssv2573836,nssv2573827,nssv2573830,nssv2573847,nssv2573860,nssv2573850 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945706 1 125400 176984 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751875,nssv1751498,nssv1751871,nssv1751487,nssv1751506,nssv1751496,nssv1751869,nssv1752909,nssv1751512,nssv1751488,nssv1751867,nssv1751918,nssv1751503,nssv1751889,nssv1751504,nssv1751892,nssv1751873,nssv1751903,nssv1751877,nssv1751542,nssv1751866,nssv1751900,nssv1751509,nssv1751896,nssv1751505,nssv1751490,nssv1751881,nssv1751484,nssv1751507,nssv1751897,nssv1751883,nssv1751494,nssv1751882,nssv1751502,nssv1751508,nssv1751904,nssv1751511,nssv1751951,nssv1751880,nssv1751520,nssv1751864,nssv1752964,nssv1751872,nssv1751531,nssv1751870,nssv1751888,nssv1751879,nssv1751492,nssv1751878,nssv1751940,nssv1751884,nssv1751483,nssv1751874,nssv1751901,nssv1751868,nssv1751514,nssv1752931,nssv1751513,nssv1751497,nssv1751863,nssv1751495,nssv1751491,nssv1751500,nssv1751489,nssv1751480,nssv1751893,nssv1751477,nssv1751907,nssv1751501,nssv1751476,nssv1752887,nssv1752920,nssv1751890,nssv1751485,nssv1751891,nssv1751894,nssv1751478,nssv1751575,nssv1751586,nssv1751481,nssv1752942,nssv1751510,nssv1751499,nssv1751885,nssv1751493,nssv1752953,nssv1752898,nssv1751564,nssv1751479,nssv1751886,nssv1751895,nssv1751486,nssv1751929,nssv1751482,nssv1751902,nssv1751553,nssv1751597 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945504 1 129243 133502 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574863,nssv2573889,nssv2573870,nssv2573923,nssv2574861,nssv2573894,nssv2574866,nssv2573916,nssv2573878,nssv2573886,nssv2573883,nssv2573910,nssv2573876,nssv2573921,nssv2573867,nssv2573892,nssv2574859,nssv2573912,nssv2573871,nssv2574857,nssv2573879,nssv2573924,nssv2573875,nssv2573885,nssv2573882,nssv2573920,nssv2574867,nssv2573925,nssv2573869,nssv2573904,nssv2574864,nssv2573911,nssv2573877,nssv2573909,nssv2573868,nssv2573926,nssv2573874,nssv2573898,nssv2573880,nssv2573888,nssv2573865,nssv2573891,nssv2573881,nssv2574856,nssv2573866,nssv2573893,nssv2574862,nssv2574855,nssv2574858,nssv2573915,nssv2573872,nssv2573901,nssv2574860,nssv2573919,nssv2573873,nssv2573895,nssv2573899,nssv2574865,nssv2573896,nssv2573908,nssv2573864,nssv2573903,nssv2573914,nssv2573890,nssv2573897,nssv2574854,nssv2574853,nssv2573907,nssv2573918,nssv2573900,nssv2574852,nssv2573927,nssv2573887,nssv2573884,nssv2573917,nssv2573906,nssv2573905,nssv2573922,nssv2573913,nssv2573902 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv991724 1 136181 137326 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586083 M 3 0 1 "" HuRef esv3357639 1 136289 137487 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691773 M 185 1 0 "" NA19240 nsv8990 1 176262 177360 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv14779 M 31 0 1 "" NA18572 nsv945708 1 257667 266240 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752400,nssv2575117,nssv1753660,nssv1752565,nssv1753664,nssv1753631,nssv1752279,nssv2575116,nssv1753658,nssv1753670,nssv1752356,nssv2575115,nssv1752323,nssv1753632,nssv1753656,nssv1753626,nssv1753665,nssv1752543,nssv1751630,nssv1753654,nssv1753657,nssv1753644,nssv1753662,nssv1753634,nssv1752301,nssv1752521,nssv1752345,nssv2575111,nssv1752312,nssv1753642,nssv1752268,nssv1753640,nssv1752422,nssv1753646,nssv1752389,nssv1753666,nssv1751619,nssv1753651,nssv1752290,nssv2575120,nssv1751641,nssv2575110,nssv1752433,nssv1753668,nssv1752411,nssv1753588,nssv1752367,nssv1753629,nssv1753661,nssv1752532,nssv1752334,nssv1753577,nssv1753659,nssv1753649,nssv1752378,nssv1753630,nssv1753645,nssv1753671,nssv1752488,nssv1753533,nssv1752499,nssv1753669,nssv1753625,nssv1753500,nssv1753643,nssv1753511,nssv1752444,nssv1753624,nssv1753555,nssv1753667,nssv1753628,nssv1753655,nssv1753641,nssv1753675,nssv2575118,nssv2575112,nssv1752477,nssv1753544,nssv1753637,nssv1753638,nssv2575113,nssv2575119,nssv1753639,nssv1753627,nssv1753653,nssv1753648,nssv1753635,nssv1753650,nssv1753647,nssv1753672,nssv1753663,nssv1752466,nssv1752554,nssv1751608,nssv1753674,nssv1753652,nssv2575114,nssv1753610,nssv1753636,nssv1753673,nssv1753623,nssv1753633,nssv1752455,nssv1752510,nssv1753621,nssv1753599,nssv1753566,nssv1753522 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv953122 1 257850 297449 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001722 M 1 1 0 "" BILGI_BIOE dgv7e59 1 260138 269036 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3432331,esv3413313,esv3431827 M 185 3 0 "" NA12878,NA19239,NA19240 esv3337205 1 261338 265936 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692128 M 185 1 0 "" NA12892 nsv945509 1 266240 269665 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574793,nssv2575132,nssv2574782,nssv2574792,nssv2574768,nssv2574777,nssv2574766,nssv2574767,nssv2574774,nssv2575126,nssv2574762,nssv2574780,nssv2575125,nssv2574763,nssv2574775,nssv2575129,nssv2574783,nssv2574761,nssv2574776,nssv2574789,nssv2574784,nssv2574786,nssv2574778,nssv2575127,nssv2574760,nssv2574779,nssv2575128,nssv2574787,nssv2574790,nssv2574788,nssv2574771,nssv2574759,nssv2574785,nssv2574758,nssv2575122,nssv2575130,nssv2574791,nssv2574765,nssv2574773,nssv2574764,nssv2575131,nssv2574770,nssv2574781,nssv2574772,nssv2574769,nssv2575124,nssv2575123,nssv2574794 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945710 1 269665 271806 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574801,nssv2574805,nssv2574799,nssv2574795,nssv2574802,nssv2574803,nssv2574796,nssv2574798,nssv2574797,nssv2574804,nssv2574800 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945709 1 269665 297968 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753677,nssv1753715,nssv1754654,nssv1753696,nssv1753683,nssv1754643,nssv1753689,nssv1754456,nssv1753692,nssv1753722,nssv1753694,nssv1753676,nssv1754610,nssv1753706,nssv1753681,nssv1753725,nssv1754599,nssv1754533,nssv1753695,nssv1754423,nssv1753685,nssv1753703,nssv1753688,nssv1753730,nssv1754566,nssv1753712,nssv1753682,nssv1754500,nssv1754577,nssv1753700,nssv1753678,nssv1753697,nssv1753680,nssv1753763,nssv1753690,nssv1753710,nssv1753687,nssv1753717,nssv1753693,nssv1753796,nssv1753686,nssv1753714,nssv1754588,nssv1754522,nssv1754665,nssv1753723,nssv1753684,nssv1753719,nssv1753679,nssv1753752,nssv1754621,nssv1753709,nssv1753691,nssv1753707,nssv1754632,nssv1753698,nssv1753718,nssv1754555,nssv1753716,nssv1753701,nssv1754511,nssv1754478,nssv1753741,nssv1754467,nssv1753785,nssv1754489,nssv1754434,nssv1754445,nssv1753774,nssv1753721,nssv1753711,nssv1753702,nssv1753724,nssv1754544,nssv1753708,nssv1753713,nssv1753704,nssv1753705,nssv1753699,nssv1753720 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3424705 1 271538 273836 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692166 M 185 1 0 "" NA19240 nsv945510 1 271806 274148 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2574835,nssv2574836,nssv2574839,nssv2574816,nssv2574818,nssv2574825,nssv2575751,nssv2574810,nssv2574850,nssv2574833,nssv2574822,nssv2574815,nssv2574819,nssv2574831,nssv2574830,nssv2574823,nssv2574842,nssv2574846,nssv2575749,nssv2574840,nssv2574843,nssv2574814,nssv2574809,nssv2574826,nssv2574832,nssv2574837,nssv2574820,nssv2574849,nssv2574811,nssv2574817,nssv2575750,nssv2574851,nssv2574827,nssv2574812,nssv2574848,nssv2574847,nssv2574829,nssv2574838,nssv2574807,nssv2574824,nssv2574821,nssv2574828,nssv2574841,nssv2574813,nssv2574834,nssv2574844,nssv2574808,nssv2574845 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945513 1 274148 274982 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575766,nssv2575763,nssv2575792,nssv2575795,nssv2575755,nssv2575777,nssv2575769,nssv2575759,nssv2575756,nssv2575794,nssv2575791,nssv2575773,nssv2575761,nssv2575783,nssv2575764,nssv2575779,nssv2575770,nssv2575799,nssv2575782,nssv2575771,nssv2575793,nssv2575767,nssv2575788,nssv2575758,nssv2575765,nssv2575753,nssv2575789,nssv2575781,nssv2575780,nssv2575754,nssv2575784,nssv2575757,nssv2575760,nssv2575790,nssv2575786,nssv2575768,nssv2575787,nssv2575776,nssv2575762,nssv2575778,nssv2575797,nssv2575801,nssv2575798,nssv2575774,nssv2575796,nssv2575772,nssv2575775,nssv2575785,nssv2575800 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945514 1 274982 276034 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575819,nssv2575816,nssv2575843,nssv2575829,nssv2575834,nssv2575849,nssv2575827,nssv2575835,nssv2575815,nssv2575830,nssv2575807,nssv2575841,nssv2575822,nssv2575818,nssv2575846,nssv2575817,nssv2575806,nssv2575831,nssv2575847,nssv2575805,nssv2575845,nssv2575825,nssv2575804,nssv2575803,nssv2575839,nssv2575823,nssv2575832,nssv2575810,nssv2575838,nssv2575812,nssv2575821,nssv2575844,nssv2575840,nssv2575808,nssv2575836,nssv2575802,nssv2575809,nssv2575814,nssv2575820,nssv2575826,nssv2575813,nssv2575837,nssv2575811,nssv2575828,nssv2575833,nssv2575842,nssv2575848,nssv2575824 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3352725 1 275238 277436 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692188 M 185 1 0 "" NA19239 esv3390070 1 275938 277536 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692193 M 185 1 0 "" NA19240 nsv945516 1 276034 288319 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2575866,nssv2568296,nssv2568297,nssv2575874,nssv2575859,nssv2569140,nssv2569139,nssv2568292,nssv2575867,nssv2575871,nssv2575862,nssv2568301,nssv2575878,nssv2575863,nssv2575857,nssv2575854,nssv2575865,nssv2575861,nssv2568299,nssv2575879,nssv2569141,nssv2569138,nssv2575876,nssv2568298,nssv2568300,nssv2568293,nssv2575875,nssv2575851,nssv2575869,nssv2575868,nssv2575873,nssv2575858,nssv2575852,nssv2568291,nssv2575882,nssv2568295,nssv2575855,nssv2575883,nssv2575870,nssv2575856,nssv2575853,nssv2575877,nssv2575860,nssv2575864,nssv2575881,nssv2568294,nssv2575880,nssv2575872 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3416780 1 279738 281836 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692195 M 185 1 0 "" NA19239 esv3413391 1 279738 284436 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692196 M 185 1 0 "" NA19240 esv3347825 1 280538 281836 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692199 M 185 1 0 "" NA19238 esv3381085 1 282338 285636 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692200 M 185 1 0 "" NA19239 esv3405973 1 282438 284336 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692201 M 185 1 0 "" NA19238 nsv945517 1 288319 297968 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569145,nssv2569174,nssv2569156,nssv2569161,nssv2569184,nssv2569163,nssv2569164,nssv2569162,nssv2569148,nssv2569158,nssv2569183,nssv2569155,nssv2569181,nssv2569151,nssv2569154,nssv2569190,nssv2569166,nssv2569167,nssv2569182,nssv2569180,nssv2569157,nssv2569152,nssv2569187,nssv2569142,nssv2569175,nssv2569173,nssv2569179,nssv2569143,nssv2569146,nssv2569170,nssv2569189,nssv2569186,nssv2569147,nssv2569150,nssv2569188,nssv2569153,nssv2569144,nssv2569160,nssv2569169,nssv2569171,nssv2569159,nssv2569177,nssv2569176,nssv2569172,nssv2569178,nssv2569165,nssv2569185,nssv2569149,nssv2569168 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945718 1 347969 355697 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1748188,nssv1748228,nssv1748194,nssv1748237,nssv1748185,nssv1749497,nssv1749493,nssv1748202,nssv1749489,nssv1748241,nssv1748178,nssv1748209,nssv1748195,nssv1748212,nssv1748254,nssv1749502,nssv1749494,nssv2571741,nssv1748193,nssv2571734,nssv1748253,nssv1748247,nssv1748189,nssv2571740,nssv1748255,nssv1748210,nssv1748191,nssv1748206,nssv1749491,nssv1748238,nssv1749490,nssv1748220,nssv1748183,nssv1749495,nssv1748182,nssv1748199,nssv1748187,nssv1748244,nssv1748190,nssv1748218,nssv1748184,nssv1749492,nssv1748180,nssv1748230,nssv1748181,nssv1748217,nssv1748179,nssv1748234,nssv1749488,nssv1748229,nssv1748192,nssv1748219,nssv1748186,nssv1749500,nssv1748177,nssv1748205,nssv1749499,nssv1748215,nssv1748248,nssv1748232,nssv1748203,nssv1748246,nssv1748213,nssv1748221,nssv1748249,nssv2571743,nssv1748239,nssv1748222,nssv2571735,nssv1748243,nssv1748252,nssv2571736,nssv1748201,nssv1748207,nssv1748240,nssv1748235,nssv1748251,nssv1748197,nssv1748216,nssv1748208,nssv1748227,nssv1749498,nssv1749504,nssv1748245,nssv2571739,nssv1748204,nssv1748231,nssv1748233,nssv1748236,nssv1749496,nssv2571733,nssv1748223,nssv2571737,nssv1749503,nssv1748250,nssv2571738,nssv1748198,nssv1748225,nssv1748196,nssv1748214,nssv1748242,nssv1748200,nssv1748176,nssv2571742,nssv1749501,nssv1748226,nssv1748224,nssv1748211 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1004360 1 347969 358276 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586709 M 3 1 0 "" HuRef nsv428223 1 347969 501617 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450575,nssv450686 M 62 1 1 "" HGDP00984,NA18498 esv27883 1 348000 501567 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv15703,esv15785,esv17876,esv14573,esv20401,esv16611,esv13800,esv10639,esv13367,esv9873,esv20387 M 40 13 17 "" NA11894,NA11993,NA12006,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18511,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19108,NA19114,NA19190,NA19225 dgv8e59 1 348050 358648 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3381255,esv3445983 M 185 2 0 "" NA12878,NA12892 nsv953222 1 348237 356336 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003132 M 1 1 0 "" BILGI_BIOE nsv471518 1 348413 501198 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547890,nssv547887,nssv547888 M 3 3 0 "" JDW,NA18507,YH dgv1n14 1 352736 497538 CNV gain Cooper_et_al_2008 18776910 SNP array nsv433345,nsv433344,nsv433342 M 9 3 0 "" NA12156,NA18555,NA19240 nsv945717 1 355697 359393 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755744,nssv1755771,nssv1755754,nssv1755769,nssv1755751,nssv1755782,nssv1755768,nssv1748172,nssv1755775,nssv1755745,nssv1755772,nssv1755764,nssv1755748,nssv1755759,nssv1748173,nssv1755762,nssv1755784,nssv1755761,nssv1755773,nssv1755755,nssv1755750,nssv1755779,nssv1755777,nssv1755753,nssv1755756,nssv1748170,nssv1755765,nssv1755767,nssv1748175,nssv1755747,nssv1755781,nssv1755758,nssv1755760,nssv1755746,nssv1755749,nssv1755776,nssv1755766,nssv1748174,nssv1755770,nssv1755783,nssv1755752,nssv1755778,nssv1755774,nssv1755743,nssv1755757,nssv1748171,nssv1755763,nssv1755780 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3419296 1 357550 358548 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692347 M 185 1 0 "" NA19238 esv994970 1 358323 382608 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586250 M 3 0 1 "" HuRef nsv945716 1 359393 380649 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755737,nssv1755739,nssv1755738,nssv1755736,nssv1755740,nssv1755742,nssv1755734,nssv1755735,nssv1755741,nssv1755733,nssv1755732 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3410685 1 359650 363048 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692345 M 185 1 0 "" NA12878 esv3334942 1 362250 368348 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692344 M 185 1 0 "" NA19239 nsv544874 1 364689 440332 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707624 M 17421 0 1 "" esv3426596 1 365750 368448 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692343 M 185 1 0 "" NA19240 esv3391927 1 366950 368448 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692342 M 185 1 0 "" NA19238 nsv945539 1 380649 383955 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571721,nssv2571724,nssv2571729,nssv2571722,nssv2571730,nssv2571731,nssv2571723,nssv2571728,nssv2571726,nssv2571725,nssv2571727 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945537 1 383955 392283 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571720,nssv2571714,nssv2571716,nssv2571711,nssv2571718,nssv2571709,nssv2571710,nssv2571717,nssv2571713,nssv2571712,nssv2571719,nssv2571715 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945715 1 383955 447598 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756488,nssv1756522,nssv1755722,nssv1756536,nssv1756486,nssv1756533,nssv1756503,nssv1756517,nssv1756491,nssv1756524,nssv1756498,nssv1756553,nssv1756492,nssv1756547,nssv1755727,nssv1756511,nssv1755731,nssv1756530,nssv1755724,nssv1756543,nssv1756501,nssv1756534,nssv1756489,nssv1756512,nssv1756499,nssv1756516,nssv1755726,nssv1756551,nssv1755723,nssv1756546,nssv1756494,nssv1756513,nssv1756490,nssv1756507,nssv1756493,nssv1756528,nssv1756497,nssv1756537,nssv1756500,nssv1756532,nssv1756504,nssv1756552,nssv1756496,nssv1756519,nssv1756487,nssv1756523,nssv1756502,nssv1756514,nssv1755725,nssv1755728,nssv1755730,nssv1756515,nssv1756495,nssv1756539,nssv1756521,nssv1756510,nssv1756526,nssv1756509,nssv1756529,nssv1756520,nssv1756525,nssv1756508,nssv1755721,nssv1756541,nssv1756527,nssv1756549,nssv1756505,nssv1756506,nssv1756485,nssv1756531,nssv1756540,nssv1756542,nssv1756545,nssv1756550,nssv1756544,nssv1756538,nssv1756548,nssv1756518,nssv1756535,nssv1755729 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3347881 1 386850 388348 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692334 M 185 1 0 "" NA12878 esv3416681 1 389850 394248 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692327 M 185 1 0 "" NA19238 esv3444251 1 391650 394248 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692326 M 185 1 0 "" NA12878 nsv945536 1 392283 393287 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571701,nssv2571707,nssv2571704,nssv2571698,nssv2571699,nssv2571697,nssv2571700,nssv2571705,nssv2571708,nssv2571702,nssv2571706,nssv2571703 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945535 1 393287 395052 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571692,nssv2571688,nssv2571687,nssv2571695,nssv2571696,nssv2571685,nssv2571694,nssv2571690,nssv2571691,nssv2571686,nssv2571693,nssv2571689 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv829647 1 394162 501463 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441629,nssv1445961,nssv1449294,nssv1450405,nssv1447072,nssv1442628,nssv1443739,nssv1448183,nssv1441517,nssv1441518,nssv1444850 M 95 1 10 "" nsv945533 1 395052 396505 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571682,nssv2571681,nssv2571676,nssv2571677,nssv2571675,nssv2571673,nssv2571679,nssv2571683,nssv2571678,nssv2571684,nssv2571674,nssv2571680 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945532 1 396505 398949 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571667,nssv2571672,nssv2571665,nssv2571669,nssv2571664,nssv2571663,nssv2571662,nssv2571670,nssv2571666,nssv2571671,nssv2571668 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945530 1 398949 403423 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571650,nssv2571653,nssv2571660,nssv2571658,nssv2571651,nssv2571652,nssv2571657,nssv2571654,nssv2571655,nssv2571656,nssv2571659 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945529 1 403423 405802 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571619,nssv2571616,nssv2571612,nssv2571627,nssv2571642,nssv2571602,nssv2571647,nssv2571643,nssv2571649,nssv2571628,nssv2571624,nssv2571601,nssv2571626,nssv2571633,nssv2571644,nssv2571608,nssv2571613,nssv2571614,nssv2571622,nssv2571611,nssv2571615,nssv2571640,nssv2571623,nssv2571639,nssv2571645,nssv2571610,nssv2571617,nssv2571641,nssv2571606,nssv2571603,nssv2571638,nssv2571621,nssv2571648,nssv2571609,nssv2571620,nssv2571635,nssv2571634,nssv2571629,nssv2571604,nssv2571636,nssv2571625,nssv2571618,nssv2571605,nssv2571607,nssv2571631,nssv2571632,nssv2571637,nssv2571646,nssv2571630 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3359178 1 405450 409348 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692323 M 185 1 0 "" NA12878 nsv945528 1 405802 409872 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571572,nssv2571595,nssv2571589,nssv2571600,nssv2571584,nssv2571574,nssv2571563,nssv2571597,nssv2571552,nssv2571569,nssv2571590,nssv2571567,nssv2571566,nssv2571599,nssv2571571,nssv2571594,nssv2571575,nssv2571579,nssv2571558,nssv2571586,nssv2571573,nssv2571559,nssv2571560,nssv2571565,nssv2571592,nssv2571570,nssv2571578,nssv2571581,nssv2571576,nssv2571568,nssv2571555,nssv2571577,nssv2571553,nssv2571585,nssv2571596,nssv2571580,nssv2571583,nssv2571557,nssv2571593,nssv2571591,nssv2571556,nssv2571582,nssv2571598,nssv2571564,nssv2571588,nssv2571554,nssv2571562,nssv2571587,nssv2571561 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945527 1 409872 421456 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571526,nssv2571525,nssv2571521,nssv2571537,nssv2571516,nssv2571520,nssv2571513,nssv2571549,nssv2571544,nssv2571546,nssv2571512,nssv2571545,nssv2571504,nssv2571548,nssv2571536,nssv2571543,nssv2571527,nssv2571518,nssv2571515,nssv2571523,nssv2571538,nssv2571550,nssv2571528,nssv2571519,nssv2571530,nssv2571509,nssv2571514,nssv2571540,nssv2571551,nssv2571541,nssv2571510,nssv2571547,nssv2571535,nssv2571507,nssv2571511,nssv2571524,nssv2571534,nssv2571517,nssv2571542,nssv2571522,nssv2571533,nssv2571506,nssv2571539,nssv2571508,nssv2571529,nssv2571505,nssv2571532,nssv2571531 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3438382 1 432650 433548 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692318 M 185 1 0 "" NA19239 nsv945265 1 447598 467031 OTHER complex Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1678962,nssv1679716,nssv1679594,nssv1677731,nssv1679761,nssv1677676,nssv1756466,nssv1686360,nssv1756440,nssv1679738,nssv1677816,nssv1677641,nssv1756439,nssv1679628,nssv1756441,nssv1677642,nssv1756481,nssv1679705,nssv1756437,nssv1679627,nssv1756480,nssv1682237,nssv1756458,nssv1679639,nssv1679683,nssv1679672,nssv1679073,nssv1677654,nssv1756444,nssv1679661,nssv1756449,nssv1679616,nssv1679775,nssv1677698,nssv1756467,nssv1677709,nssv1756462,nssv1677687,nssv1756482,nssv1683216,nssv1756445,nssv1677643,nssv1756476,nssv1684709,nssv1680810,nssv1677720,nssv1677742,nssv1679650,nssv1756452,nssv1684698,nssv1756453,nssv1677753,nssv1756443,nssv1677665,nssv1682178,nssv1756456,nssv1756451,nssv1756455,nssv1679727,nssv1679605,nssv1756484,nssv1756450,nssv1756473,nssv1756477,nssv1756474,nssv1679739,nssv1680921,nssv1756446,nssv1756471,nssv1756438,nssv1756459,nssv1679492,nssv1677927,nssv1681956,nssv1756461,nssv1756442,nssv1756470,nssv1677765,nssv1756463,nssv1756469,nssv1682067,nssv1756468,nssv1679750,nssv1677754,nssv1756479,nssv1756465,nssv1756475,nssv1756472,nssv1756483,nssv1756448,nssv1756454,nssv1679694,nssv1756478,nssv1756457,nssv1756447,nssv1756460,nssv1756464 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv514924 1 451158 452288 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2863469,nssv2863885,nssv2867490,nssv2862379,nssv2865136,nssv2862784,nssv2864260,nssv2867103,nssv2862493,nssv2859917,nssv2867689,nssv2864546,nssv2858631,nssv2866661,nssv2864777,nssv2862431,nssv2859091,nssv2863100,nssv2865175,nssv2862059,nssv2862420,nssv2862009,nssv2860769,nssv2864216,nssv2860428,nssv2868243,nssv2866540,nssv2867661,nssv2862400,nssv2866835,nssv2865659,nssv2866132,nssv2863812,nssv2866798,nssv2866012,nssv2864823,nssv2861953,nssv2866752,nssv2865221,nssv2863615,nssv2867027,nssv2868325,nssv2867047,nssv2861853,nssv2859791,nssv2866751,nssv2867218,nssv2859077,nssv2858554,nssv2860916,nssv2864835,nssv2864615,nssv2867383,nssv2860657,nssv2858699,nssv2860628,nssv2867249,nssv2866039,nssv2858819,nssv2858797,nssv2867737,nssv2859293,nssv2861542,nssv2862685,nssv2864268,nssv2861858,nssv2862976,nssv2861234,nssv2860871,nssv2863997,nssv2859106,nssv2867206,nssv2862008,nssv2860550,nssv2868492,nssv2858950,nssv2861826,nssv2862988,nssv2861519,nssv2867200,nssv2858809,nssv2866240,nssv2862500,nssv2864957,nssv2862285,nssv2859894,nssv2863224,nssv2861157,nssv2866686,nssv2865946,nssv2859691,nssv2862985,nssv2859989,nssv2864374,nssv2864967,nssv2863813,nssv2863335,nssv2864063,nssv2864885,nssv2859498,nssv2863551,nssv2862141,nssv2860534,nssv2858723,nssv2864604,nssv2864233,nssv2867319,nssv2859526,nssv2860091,nssv2867834,nssv2864045,nssv2859918,nssv2861599,nssv2858648,nssv2859039,nssv2863820,nssv2866121,nssv2868103,nssv2868031,nssv2862029,nssv2866478,nssv2860915,nssv2863516,nssv2860416,nssv2860603,nssv2866347,nssv2860512,nssv2864941,nssv2866547,nssv2868253,nssv2861656,nssv2863474,nssv2863731,nssv2866422,nssv2865550,nssv2862722,nssv2862441,nssv2866175,nssv2859879,nssv2858945,nssv2864032,nssv2866977,nssv2858495,nssv2860934,nssv2866346,nssv2859497,nssv2862194,nssv2864160,nssv2862363,nssv2867451,nssv2866203,nssv2863290,nssv2865032,nssv2861874,nssv2868309,nssv2865836,nssv2863163,nssv2859034,nssv2862841,nssv2865396,nssv2867072,nssv2866662,nssv2866867,nssv2864782,nssv2863759,nssv2865606,nssv2863983,nssv2864736,nssv2866126,nssv2864997,nssv2868182,nssv2861926,nssv2859361,nssv2867890,nssv2861413,nssv2864217,nssv2861053,nssv2862030,nssv2864179,nssv2864057,nssv2866104,nssv2859326,nssv2864064,nssv2865553,nssv2862828,nssv2859078,nssv2861881,nssv2860415,nssv2860771,nssv2862091,nssv2862545,nssv2864966,nssv2859345,nssv2860882,nssv2862754,nssv2864960,nssv2866061,nssv2865207,nssv2868361,nssv2862326,nssv2861241,nssv2865663,nssv2866532,nssv2866973,nssv2864440,nssv2859557,nssv2868254,nssv2860382,nssv2864276,nssv2859933,nssv2867598,nssv2868339,nssv2868474,nssv2864758,nssv2863835,nssv2864388,nssv2863643,nssv2864408,nssv2866683,nssv2863806,nssv2862417,nssv2862494,nssv2864905,nssv2866048,nssv2867382,nssv2862117,nssv2866251,nssv2867487,nssv2862921,nssv2865277,nssv2861562,nssv2862284,nssv2862035,nssv2862765,nssv2865583,nssv2866864,nssv2865025,nssv2866517,nssv2861345,nssv2865821,nssv2864598,nssv2865057,nssv2863590,nssv2867682,nssv2860388,nssv2863943,nssv2865461,nssv2858625,nssv2863502,nssv2862207,nssv2860982,nssv2858904,nssv2861967,nssv2865437,nssv2867752,nssv2860775,nssv2866565,nssv2862927,nssv2864353,nssv2859368,nssv2867390,nssv2861018,nssv2858824,nssv2866797,nssv2863873,nssv2860554,nssv2862593,nssv2861167,nssv2862554,nssv2859860,nssv2859402,nssv2862180,nssv2862314,nssv2866668,nssv2860372,nssv2866764,nssv2864797,nssv2862714,nssv2860480,nssv2860240,nssv2865435,nssv2865846,nssv2858843,nssv2861737,nssv2867250,nssv2859837,nssv2864195,nssv2861299,nssv2862348,nssv2862596,nssv2863346,nssv2862541,nssv2860276,nssv2864914,nssv2868231,nssv2867457,nssv2862123,nssv2861639,nssv2865200,nssv2866264,nssv2868006,nssv2858632,nssv2863203,nssv2862815,nssv2865093,nssv2866044,nssv2864976,nssv2860354,nssv2862024,nssv2865338,nssv2861957,nssv2866340,nssv2866645,nssv2863347,nssv2861837,nssv2866054,nssv2866637,nssv2863496,nssv2862147,nssv2859457,nssv2863821,nssv2865996,nssv2859697,nssv2865956,nssv2860753,nssv2862783,nssv2859792,nssv2866652,nssv2862759,nssv2859221,nssv2859993,nssv2861928,nssv2861944,nssv2860438,nssv2860621,nssv2865808,nssv2865056,nssv2860830,nssv2863452,nssv2861022,nssv2866447,nssv2859275,nssv2859254,nssv2863369,nssv2863049,nssv2862953,nssv2867933,nssv2865633,nssv2859248,nssv2861518,nssv2867973,nssv2864857,nssv2864173,nssv2866209,nssv2866575,nssv2864400,nssv2864695,nssv2862673,nssv2866409,nssv2867004,nssv2862168,nssv2866972,nssv2867889,nssv2863429,nssv2868158,nssv2864149,nssv2864389,nssv2866556,nssv2863998,nssv2864877,nssv2858659,nssv2864368,nssv2860829,nssv2860896,nssv2864990,nssv2862740,nssv2867595,nssv2864567,nssv2861893,nssv2861002,nssv2866840,nssv2862660,nssv2861150,nssv2864103,nssv2867749,nssv2859623,nssv2863225,nssv2862975,nssv2864759,nssv2865414,nssv2863532,nssv2863949,nssv2864909,nssv2859401,nssv2866548,nssv2866971,nssv2862600,nssv2863412,nssv2861377,nssv2867303,nssv2860674,nssv2862460,nssv2864018,nssv2867020,nssv2866831,nssv2864044,nssv2858933,nssv2866970,nssv2866853,nssv2867930,nssv2866598,nssv2866687,nssv2864578,nssv2866982,nssv2867543,nssv2861803,nssv2866878,nssv2866984,nssv2865554,nssv2864925,nssv2863508,nssv2866632,nssv2866883,nssv2860353,nssv2862469,nssv2866265,nssv2866554,nssv2866195,nssv2862897,nssv2858519,nssv2867947,nssv2862512,nssv2866555,nssv2858724,nssv2865079,nssv2862220,nssv2866094,nssv2864528,nssv2863561,nssv2860347,nssv2861414,nssv2860592,nssv2863901,nssv2865436,nssv2864577,nssv2867671,nssv2860284,nssv2862367,nssv2864035,nssv2861438,nssv2864259,nssv2866779,nssv2866708,nssv2859168,nssv2859280,nssv2861045,nssv2867774,nssv2864671,nssv2867570,nssv2865195,nssv2858963,nssv2862565,nssv2859548,nssv2859187,nssv2864719,nssv2865173,nssv2861583,nssv2860015,nssv2866856,nssv2861430,nssv2859521,nssv2862208,nssv2867293,nssv2860469,nssv2862258,nssv2867757,nssv2860049,nssv2858909,nssv2863170,nssv2860808,nssv2861593,nssv2864316,nssv2861784,nssv2864280,nssv2859890,nssv2859398,nssv2866581,nssv2862808 M 2366 488 0 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv945525 1 467031 476175 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571471,nssv2571491,nssv2571489,nssv2570543,nssv2571493,nssv2571467,nssv2570548,nssv2571487,nssv2571469,nssv2571500,nssv2571490,nssv2571466,nssv2571486,nssv2571479,nssv2571485,nssv2571498,nssv2571470,nssv2570540,nssv2571495,nssv2571473,nssv2571494,nssv2570547,nssv2571465,nssv2571475,nssv2571497,nssv2571499,nssv2571492,nssv2570542,nssv2571496,nssv2571480,nssv2571478,nssv2571488,nssv2571477,nssv2571476,nssv2571474,nssv2570544,nssv2571482,nssv2571481,nssv2571483,nssv2571501,nssv2570549,nssv2571472,nssv2570546,nssv2571484,nssv2571464,nssv2570545,nssv2571468,nssv2570541 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945713 1 467031 481637 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756052,nssv1756079,nssv1756429,nssv1756083,nssv1756067,nssv1756091,nssv1756062,nssv1756401,nssv1756050,nssv1756426,nssv1756427,nssv1756422,nssv1756056,nssv1756076,nssv1756055,nssv1756409,nssv1756432,nssv1756433,nssv1756430,nssv1756418,nssv1756063,nssv1756070,nssv1756059,nssv1756425,nssv1756065,nssv1756069,nssv1756068,nssv1756403,nssv1756436,nssv1756413,nssv1756058,nssv1756077,nssv1756435,nssv1756085,nssv1756061,nssv1756075,nssv1756054,nssv1756078,nssv1756066,nssv1756082,nssv1756431,nssv1756434,nssv1756064,nssv1756087,nssv1756428,nssv1756410,nssv1756057,nssv1756049,nssv1756060,nssv1756073,nssv1756051,nssv1756086,nssv1756053,nssv1756092,nssv1756090,nssv1756080,nssv1756405,nssv1756084,nssv1756402,nssv1756089,nssv1756411,nssv1756412,nssv1756081,nssv1756072,nssv1756414,nssv1756071,nssv1756424,nssv1756074,nssv1756423,nssv1756421,nssv1756407,nssv1756417,nssv1756420,nssv1756419,nssv1756406,nssv1756415,nssv1756416,nssv1756088,nssv1756404,nssv1756408 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945524 1 476175 476675 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570558,nssv2570526,nssv2569435,nssv2570562,nssv2569445,nssv2570538,nssv2570566,nssv2569442,nssv2570567,nssv2570533,nssv2570523,nssv2570525,nssv2570528,nssv2570524,nssv2569434,nssv2569444,nssv2570565,nssv2570529,nssv2569437,nssv2569433,nssv2570561,nssv2570554,nssv2569440,nssv2570530,nssv2569439,nssv2570551,nssv2570564,nssv2569443,nssv2569438,nssv2570557,nssv2570531,nssv2570553,nssv2570536,nssv2570535,nssv2570563,nssv2570555,nssv2570552,nssv2570532,nssv2570559,nssv2570534,nssv2570550,nssv2570556,nssv2570527,nssv2569436,nssv2570537,nssv2570522,nssv2569441,nssv2570560 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945521 1 476675 478979 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569409,nssv2569419,nssv2569389,nssv2569385,nssv2569408,nssv2569399,nssv2569398,nssv2569413,nssv2569426,nssv2569425,nssv2569416,nssv2569410,nssv2569430,nssv2569388,nssv2569414,nssv2569401,nssv2569420,nssv2569384,nssv2569396,nssv2569421,nssv2569402,nssv2569427,nssv2569406,nssv2569422,nssv2569394,nssv2569432,nssv2569393,nssv2569403,nssv2569405,nssv2569417,nssv2569395,nssv2569415,nssv2569429,nssv2569386,nssv2569411,nssv2569428,nssv2569424,nssv2569387,nssv2569418,nssv2569392,nssv2569404,nssv2569423,nssv2569391,nssv2569390,nssv2569407,nssv2569412,nssv2569431,nssv2569400,nssv2569397 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945520 1 481637 485248 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569315,nssv2569356,nssv2569323,nssv2569366,nssv2569307,nssv2569303,nssv2569309,nssv2569335,nssv2569379,nssv2569357,nssv2569375,nssv2569333,nssv2569305,nssv2569351,nssv2569306,nssv2569347,nssv2569383,nssv2569359,nssv2569378,nssv2569330,nssv2569316,nssv2569358,nssv2569313,nssv2569345,nssv2569318,nssv2569369,nssv2569320,nssv2569337,nssv2569382,nssv2569342,nssv2569321,nssv2569361,nssv2569380,nssv2569381,nssv2569319,nssv2569334,nssv2569311,nssv2569336,nssv2569310,nssv2569329,nssv2569322,nssv2569326,nssv2569314,nssv2569355,nssv2569308,nssv2569304,nssv2569317,nssv2569343,nssv2569374,nssv2569332,nssv2569312,nssv2569370,nssv2569377,nssv2569341,nssv2569376,nssv2569340,nssv2569352,nssv2569371,nssv2569353,nssv2569346,nssv2569362,nssv2569339,nssv2569327,nssv2569328,nssv2569338,nssv2569372,nssv2569331,nssv2569350,nssv2569364,nssv2569367,nssv2569344,nssv2569324,nssv2569325,nssv2569365,nssv2569373,nssv2569360,nssv2569363,nssv2569349,nssv2569348,nssv2569368,nssv2569354 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945712 1 481637 501617 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754687,nssv1756009,nssv1756031,nssv1755980,nssv1755803,nssv1755982,nssv1756032,nssv1756018,nssv1755935,nssv1756004,nssv1755891,nssv1756027,nssv1756029,nssv1756024,nssv1756038,nssv1756047,nssv1755880,nssv1756036,nssv1755814,nssv1756023,nssv1755825,nssv1755984,nssv1756037,nssv1756022,nssv1756034,nssv1755995,nssv1755913,nssv1755981,nssv1755946,nssv1755996,nssv1755902,nssv1756013,nssv1755836,nssv1755993,nssv1754709,nssv1756001,nssv1755869,nssv1755986,nssv1755792,nssv1756039,nssv1756033,nssv1755998,nssv1755924,nssv1755987,nssv1754698,nssv1755997,nssv1756030,nssv1755989,nssv1755858,nssv1756043,nssv1754720,nssv1754676,nssv1755847,nssv1756008,nssv1756006,nssv1755976,nssv1756020,nssv1755985,nssv1756007,nssv1755983,nssv1755977,nssv1756015,nssv1755975,nssv1755991,nssv1756005,nssv1756026,nssv1755974,nssv1756010,nssv1756002,nssv1756021,nssv1756035,nssv1756012,nssv1755968,nssv1756040,nssv1755992,nssv1755978,nssv1755994,nssv1756000,nssv1755979,nssv1756025,nssv1756041,nssv1756042,nssv1756046,nssv1756045,nssv1756028,nssv1756048,nssv1756044,nssv1756016,nssv1755999,nssv1756014,nssv1756011,nssv1755990,nssv1755988,nssv1756003,nssv1756019,nssv1755957,nssv1756017 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945519 1 485248 487657 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569272,nssv2569234,nssv2569254,nssv2569229,nssv2569279,nssv2569294,nssv2569271,nssv2569225,nssv2569252,nssv2569226,nssv2569291,nssv2569237,nssv2569284,nssv2569242,nssv2569282,nssv2569297,nssv2569292,nssv2569236,nssv2569260,nssv2569298,nssv2569281,nssv2569230,nssv2569278,nssv2569232,nssv2569253,nssv2569241,nssv2569277,nssv2569227,nssv2569245,nssv2569240,nssv2569248,nssv2569235,nssv2569250,nssv2569239,nssv2569258,nssv2569299,nssv2569274,nssv2569224,nssv2569286,nssv2569238,nssv2569261,nssv2569231,nssv2569244,nssv2569233,nssv2569289,nssv2569302,nssv2569249,nssv2569296,nssv2569276,nssv2569295,nssv2569285,nssv2569228,nssv2569251,nssv2569301,nssv2569267,nssv2569293,nssv2569223,nssv2569265,nssv2569280,nssv2569269,nssv2569255,nssv2569290,nssv2569283,nssv2569270,nssv2569257,nssv2569288,nssv2569268,nssv2569256,nssv2569259,nssv2569246,nssv2569300,nssv2569247,nssv2569266,nssv2569262,nssv2569273,nssv2569275,nssv2569287,nssv2569243,nssv2569264,nssv2569263 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv953187 1 487137 495236 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003052 M 1 0 1 "" BILGI_BIOE dgv2n82 1 585989 588370 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nsv945719,nsv945540 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv21732 1 586033 788691 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17998,esv12770,esv19173,esv17670,esv17928,esv17045,esv10580,esv19351,esv12525,esv16417,esv20880,esv18879,esv17284,esv18811 M 40 23 16 "" NA06985,NA07037,NA07045,NA11894,NA11993,NA12006,NA12044,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18505,NA18511,NA18517,NA18523,NA18858,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19190,NA19225,NA19240 esv992503 1 586078 612499 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586722 M 3 0 1 "" HuRef nsv471522 1 586759 821403 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547897,nssv547898,nssv547899 M 3 3 0 "" JDW,NA18507,YH nsv945721 1 588370 594431 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571760,nssv2571763,nssv2571767,nssv2571757,nssv2571764,nssv2571762,nssv2571759,nssv2571761,nssv2571756,nssv2571758,nssv2571765,nssv2571766 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945720 1 588370 611004 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749555,nssv1749556,nssv1749561,nssv1749558,nssv1749554,nssv1749560,nssv1749553,nssv1749557,nssv1749562,nssv1749563,nssv1749559 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3444717 1 594109 599407 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692356 M 185 1 0 "" NA19238 esv3324015 1 596109 597007 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692357 M 185 1 0 "" NA12878 dgv9e59 1 597709 598807 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3442814,esv3367382 M 185 2 0 "" NA19239,NA19240 nsv830758 1 603875 721370 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441962,nssv1441851,nssv1441740,nssv1442517,nssv1442073,nssv1442184,nssv1442295,nssv1442406 M 95 0 8 "" esv3350472 1 609109 610807 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692365 M 185 1 0 "" NA12878 nsv544875 1 609586 634224 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707625 M 17421 1 0 "" nsv945723 1 611004 613967 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573009,nssv2573007,nssv2573011,nssv2571770,nssv2571771,nssv2573010,nssv2573006,nssv2573004,nssv2573008,nssv2571769,nssv2573005 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945722 1 611004 628516 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749635,nssv1749628,nssv1749571,nssv1749592,nssv1749576,nssv1749604,nssv1749573,nssv1749609,nssv1749582,nssv1749590,nssv1749638,nssv1749614,nssv1749572,nssv1749641,nssv1749566,nssv1749613,nssv1749567,nssv1749620,nssv1749569,nssv1749626,nssv1749580,nssv1749615,nssv1749583,nssv1749601,nssv1749565,nssv1749622,nssv1749574,nssv1749593,nssv1749640,nssv1749594,nssv1749642,nssv1749617,nssv1749639,nssv1749564,nssv1749570,nssv1749586,nssv1749634,nssv1749587,nssv1749636,nssv1749629,nssv1749577,nssv1749585,nssv1749578,nssv1749591,nssv1749575,nssv1749625,nssv1749568,nssv1749595,nssv1749581,nssv1749631,nssv1749637,nssv1749630,nssv1749579,nssv1749611,nssv1749643,nssv1749607,nssv1749602,nssv1749603,nssv1749623,nssv1749608,nssv1749612,nssv1749632,nssv1749616,nssv1749596,nssv1749610,nssv1749589,nssv1749605,nssv1749584,nssv1749598,nssv1749621,nssv1749597,nssv1749633,nssv1749600,nssv1749627,nssv1749618,nssv1749606,nssv1749624,nssv1749619,nssv1749599,nssv1749588 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv10e59 1 611309 612607 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3393054,esv3377615 M 185 2 0 "" NA12878,NA12891 nsv945542 1 613967 622152 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573022,nssv2573014,nssv2573017,nssv2573020,nssv2573012,nssv2573015,nssv2573021,nssv2573023,nssv2573019,nssv2573013,nssv2573018,nssv2573016 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv11e59 1 618709 623407 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3399854,esv3433794 M 185 2 0 "" NA12878,NA19238 nsv945543 1 622152 628516 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573031,nssv2573026,nssv2573030,nssv2573024,nssv2573032,nssv2573034,nssv2573033,nssv2573035,nssv2573027,nssv2573025,nssv2573029,nssv2573028 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945724 1 628516 634676 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749650,nssv1749687,nssv1749651,nssv1749711,nssv1749647,nssv1749695,nssv1749722,nssv1749664,nssv1749653,nssv1749732,nssv1749656,nssv1749733,nssv1749662,nssv1749708,nssv1749725,nssv1749720,nssv1749730,nssv1749740,nssv1749646,nssv1749699,nssv1749654,nssv1749736,nssv1749645,nssv1749672,nssv1749660,nssv1749679,nssv1749649,nssv1749701,nssv1749663,nssv1749738,nssv1749727,nssv1749681,nssv1749726,nssv1749686,nssv1749652,nssv1749714,nssv1749721,nssv1749698,nssv1749657,nssv1749718,nssv1749658,nssv1749702,nssv1749723,nssv1749674,nssv1749655,nssv1749689,nssv1749648,nssv1749706,nssv1749724,nssv1749731,nssv1749729,nssv1749737,nssv1749659,nssv1749693,nssv1749661,nssv1749668,nssv1749697,nssv1749677,nssv1749690,nssv1749694,nssv1749713,nssv1749673,nssv1749705,nssv1749709,nssv1749700,nssv1749716,nssv1749666,nssv1749735,nssv1749717,nssv1749703,nssv1749676,nssv1749670,nssv1749682,nssv1749644,nssv1749688,nssv1749684,nssv1749734,nssv1749683,nssv1749675,nssv1749691,nssv1749692,nssv1749667,nssv1749671,nssv1749739,nssv1749665,nssv1749710,nssv1749685,nssv1749728,nssv1749669,nssv1749707,nssv1749704,nssv1749712,nssv1749696,nssv1749715,nssv1749678,nssv1749719,nssv1749680 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv949752 1 628921 634920 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997093 M 1 1 0 "" BILGI_BIOE esv3417080 1 629009 635007 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692377 M 185 1 0 "" NA19239 dgv1e24 1 629054 714367 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH esv2750642,esv2750575,esv2750566,esv2750702,esv2750655,esv2750643,esv2750735,esv2750552,esv2750553,esv2750488,esv2750730,esv2750751,esv2750723 M 51 0 13 "" 21634,21837,21847,21863,21872,21911,21938,21972,22007,22170,22231,22278,22371 dgv2n14 1 629097 770988 CNV gain Cooper_et_al_2008 18776910 SNP array nsv433347,nsv433346 M 9 2 0 "" NA12156,NA19240 nsv820617 1 629160 635395 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1419880 M 1 1 0 "" NA10851 nsv945544 1 629176 630708 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573040,nssv2573037,nssv2573042,nssv2573043,nssv2573041,nssv2573044,nssv2573039,nssv2573038,nssv2573045,nssv2573036 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv544876 1 629482 633083 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707626 M 17421 0 1 "" dgv3n54 1 630110 634798 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544878,nsv544877 M 17421 0 2 "" nsv945546 1 632774 634076 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573050,nssv2573052,nssv2573055,nssv2573047,nssv2573046,nssv2573053,nssv2573054,nssv2573051,nssv2573049,nssv2573048 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945727 1 634676 639559 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573064,nssv2573056,nssv2573066,nssv2573060,nssv2573058,nssv2573061,nssv2573062,nssv2573063,nssv2573065,nssv2573057,nssv2573059 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945726 1 634676 682530 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749747,nssv1749793,nssv1750743,nssv1749772,nssv1749759,nssv1749788,nssv1749750,nssv1749787,nssv1749753,nssv1749777,nssv1750744,nssv1749775,nssv1750736,nssv1749766,nssv1749742,nssv1749774,nssv1749748,nssv1750731,nssv1749743,nssv1749769,nssv1749760,nssv1750732,nssv1750741,nssv1749783,nssv1750739,nssv1750729,nssv1749757,nssv1750728,nssv1749746,nssv1749776,nssv1749758,nssv1749794,nssv1749749,nssv1750723,nssv1750740,nssv1749782,nssv1749754,nssv1750742,nssv1749751,nssv1750727,nssv1749745,nssv1750725,nssv1749755,nssv1749795,nssv1749752,nssv1749778,nssv1750735,nssv1750734,nssv1750737,nssv1749771,nssv1749756,nssv1749765,nssv1750738,nssv1749786,nssv1749744,nssv1749761,nssv1749779,nssv1750724,nssv1749764,nssv1750730,nssv1749792,nssv1749767,nssv1750722,nssv1749770,nssv1749773,nssv1749785,nssv1750720,nssv1750726,nssv1749791,nssv1749784,nssv1749781,nssv1749741,nssv1749780,nssv1749768,nssv1749790,nssv1750721,nssv1749763,nssv1750733,nssv1749789,nssv1749762 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3362065 1 635809 644607 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692378 M 185 1 0 "" NA12878 nsv945547 1 639559 644985 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573070,nssv2573081,nssv2573092,nssv2573113,nssv2573111,nssv2573085,nssv2573109,nssv2573103,nssv2573093,nssv2573068,nssv2573084,nssv2573091,nssv2573096,nssv2573098,nssv2573097,nssv2573100,nssv2573094,nssv2573102,nssv2573069,nssv2573104,nssv2573086,nssv2573082,nssv2573074,nssv2573110,nssv2573108,nssv2573088,nssv2573077,nssv2573101,nssv2573090,nssv2573114,nssv2573112,nssv2573095,nssv2573087,nssv2573099,nssv2573072,nssv2573083,nssv2573079,nssv2573115,nssv2573089,nssv2573076,nssv2573107,nssv2573105,nssv2573075,nssv2573106,nssv2573078,nssv2573071,nssv2573080,nssv2573073 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3393199 1 641409 643607 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692385 M 185 1 0 "" NA19240 nsv831869 1 644112 807931 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442962,nssv1443517,nssv1443073,nssv1443628,nssv1442629,nssv1443406,nssv1443184,nssv1442740,nssv1443295,nssv1442851 M 95 8 2 "" nsv945549 1 644985 646778 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573161,nssv2573118,nssv2573132,nssv2573117,nssv2573159,nssv2573131,nssv2573153,nssv2573154,nssv2573128,nssv2573152,nssv2573136,nssv2573144,nssv2573138,nssv2573155,nssv2573164,nssv2573149,nssv2573143,nssv2573126,nssv2573134,nssv2573137,nssv2573121,nssv2573127,nssv2573158,nssv2573160,nssv2573156,nssv2573123,nssv2573133,nssv2573119,nssv2573146,nssv2573163,nssv2573145,nssv2573157,nssv2573142,nssv2573135,nssv2573124,nssv2573150,nssv2573122,nssv2573148,nssv2573125,nssv2573151,nssv2573130,nssv2573140,nssv2573147,nssv2573139,nssv2573129,nssv2573162,nssv2573120,nssv2573141 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3363248 1 656709 657607 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692393 M 185 1 0 "" NA19238 dgv12e59 1 668309 669907 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3383793,esv3428101 M 185 2 0 "" NA19239,NA19240 nsv945736 1 682530 702024 OTHER complex Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1683215,nssv1686361,nssv1683206,nssv1684703,nssv1684722,nssv1750774,nssv1683218,nssv1684624,nssv1684712,nssv1686495,nssv1684710,nssv1750763,nssv1682249,nssv1750772,nssv1684713,nssv1750779,nssv1683220,nssv1750745,nssv1682260,nssv1750765,nssv1683195,nssv1750769,nssv1683296,nssv1750767,nssv1684707,nssv1684715,nssv1684711,nssv1685540,nssv1683211,nssv1750756,nssv1683221,nssv1751177,nssv1683219,nssv1686494,nssv1682226,nssv1750755,nssv1683217,nssv1686496,nssv1684708,nssv1750748,nssv1683397,nssv1750777,nssv1683212,nssv1750750,nssv1685439,nssv1750746,nssv1683213,nssv1751180,nssv1683214,nssv1684714,nssv1682238,nssv1750753,nssv1684422,nssv1750758,nssv1750781,nssv1750762,nssv1684706,nssv1751184,nssv1750754,nssv1684523,nssv1751178,nssv1684700,nssv1684699,nssv1750768,nssv1750771,nssv1751181,nssv1686462,nssv1750773,nssv1750764,nssv1684704,nssv1685641,nssv1750770,nssv1750751,nssv1684705,nssv1750782,nssv1751179,nssv1750760,nssv1684701,nssv1684702,nssv1686498,nssv1686497,nssv1750752,nssv1751176,nssv1751183,nssv1750780,nssv1751182,nssv1750761,nssv1750759,nssv1750757,nssv1750778,nssv1751185,nssv1750776,nssv1686493,nssv1750766,nssv1750775,nssv1750749,nssv1750747 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv544879 1 694362 762550 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707629 M 17421 0 1 "" nsv945730 1 702024 705985 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573192,nssv2573198,nssv2573178,nssv2573176,nssv2573193,nssv2573166,nssv2573184,nssv2573207,nssv2573180,nssv2573194,nssv2573197,nssv2573195,nssv2573177,nssv2573187,nssv2573169,nssv2573167,nssv2573168,nssv2573209,nssv2573186,nssv2573196,nssv2573185,nssv2573206,nssv2573200,nssv2573183,nssv2573190,nssv2573179,nssv2573199,nssv2573202,nssv2573211,nssv2573189,nssv2573205,nssv2573172,nssv2573173,nssv2573210,nssv2573175,nssv2573188,nssv2573208,nssv2573213,nssv2573182,nssv2573171,nssv2573203,nssv2573204,nssv2573212,nssv2573170,nssv2573191,nssv2573181,nssv2573174,nssv2573201 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945729 1 702024 727053 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751191,nssv1751253,nssv1751196,nssv1751244,nssv1751257,nssv1751217,nssv1751195,nssv1751210,nssv1751198,nssv1751206,nssv1751193,nssv1751215,nssv1751194,nssv1751241,nssv1751258,nssv1751220,nssv1751259,nssv1751229,nssv1751200,nssv1751263,nssv1751197,nssv1751255,nssv1751188,nssv1751222,nssv1751265,nssv1751212,nssv1751262,nssv1751248,nssv1751203,nssv1751208,nssv1751264,nssv1751242,nssv1751202,nssv1751238,nssv1751260,nssv1751211,nssv1751204,nssv1751250,nssv1751187,nssv1751207,nssv1751205,nssv1751230,nssv1751261,nssv1751251,nssv1751192,nssv1751231,nssv1751189,nssv1751216,nssv1751199,nssv1751239,nssv1751201,nssv1751254,nssv1751256,nssv1751236,nssv1751190,nssv1751227,nssv1751209,nssv1751218,nssv1751237,nssv1751247,nssv1751249,nssv1751219,nssv1751235,nssv1751252,nssv1751221,nssv1751245,nssv1751232,nssv1751213,nssv1751226,nssv1751214,nssv1751240,nssv1751246,nssv1751233,nssv1751225,nssv1751223,nssv1751243,nssv1751234,nssv1751224,nssv1751228,nssv1751186 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945551 1 705985 711240 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2573248,nssv2573226,nssv2573234,nssv2573261,nssv2573216,nssv2573250,nssv2573241,nssv2573231,nssv2573246,nssv2573258,nssv2573242,nssv2573247,nssv2573229,nssv2573228,nssv2573243,nssv2573224,nssv2573256,nssv2573221,nssv2573227,nssv2573219,nssv2573237,nssv2573222,nssv2573253,nssv2573236,nssv2573215,nssv2573249,nssv2573255,nssv2573252,nssv2573259,nssv2573225,nssv2573244,nssv2573218,nssv2571023,nssv2573245,nssv2573239,nssv2573223,nssv2573230,nssv2573238,nssv2573232,nssv2573220,nssv2573240,nssv2573254,nssv2573235,nssv2573233,nssv2573217,nssv2573260,nssv2573257,nssv2573251 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945552 1 711240 711740 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2571033,nssv2571039,nssv2571040,nssv2571074,nssv2571026,nssv2571034,nssv2571073,nssv2571025,nssv2571031,nssv2571047,nssv2571060,nssv2571027,nssv2571049,nssv2571035,nssv2571075,nssv2571037,nssv2571041,nssv2571024,nssv2571046,nssv2571069,nssv2571077,nssv2571063,nssv2571066,nssv2571050,nssv2571030,nssv2571070,nssv2571068,nssv2571048,nssv2571042,nssv2571055,nssv2571038,nssv2571072,nssv2571051,nssv2571044,nssv2571071,nssv2571061,nssv2571053,nssv2571067,nssv2571036,nssv2571052,nssv2571028,nssv2571057,nssv2571045,nssv2571059,nssv2571029,nssv2571062,nssv2571064,nssv2571056,nssv2571058 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945732 1 727053 794948 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751284,nssv1751324,nssv1751272,nssv1751286,nssv1751268,nssv1751295,nssv1751280,nssv1751300,nssv1751275,nssv1751308,nssv1751278,nssv1751309,nssv1751276,nssv1751306,nssv1751960,nssv1751312,nssv1751277,nssv1751319,nssv1751273,nssv1751971,nssv1751281,nssv1751976,nssv1751965,nssv1751305,nssv1751283,nssv1751293,nssv1751270,nssv1751314,nssv1751269,nssv1751266,nssv1751282,nssv1751323,nssv1751267,nssv1751322,nssv1751285,nssv1751957,nssv1751963,nssv1751954,nssv1751274,nssv1751332,nssv1751964,nssv1751294,nssv1751279,nssv1751958,nssv1751962,nssv1751952,nssv1751271,nssv1751316,nssv1751967,nssv1751304,nssv1751959,nssv1751331,nssv1751968,nssv1751955,nssv1751961,nssv1751333,nssv1751970,nssv1751328,nssv1751330,nssv1751321,nssv1751290,nssv1751318,nssv1751972,nssv1751953,nssv1751292,nssv1751973,nssv1751317,nssv1751329,nssv1751288,nssv1751291,nssv1751956,nssv1751287,nssv1751334,nssv1751307,nssv1751975,nssv1751302,nssv1751299,nssv1751325,nssv1751310,nssv1751966,nssv1751289,nssv1751335,nssv1751311,nssv1751296,nssv1751298,nssv1751969,nssv1751315,nssv1751974,nssv1751977,nssv1751303,nssv1751326,nssv1751327,nssv1751978,nssv1751301,nssv1751320,nssv1751313,nssv1751297 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv949792 1 728921 740020 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997104 M 1 1 0 "" BILGI_BIOE esv3361605 1 738009 740207 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692399 M 185 1 0 "" NA12878 esv3345025 1 738209 739607 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692400 M 185 1 0 "" NA12891 esv2762129 1 771719 901705 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7004879 M 1109 1 0 "" RW_0585 nsv10161 1 776731 1777210 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv24602,nssv24610,nssv26877,nssv26879,nssv18108,nssv28031,nssv21448,nssv21431,nssv28946,nssv24600,nssv28038,nssv28048,nssv26892,nssv21429,nssv28552,nssv28533,nssv28921,nssv26882,nssv24621,nssv28542,nssv26876,nssv28940,nssv21436,nssv28558,nssv26888,nssv28029 M 31 11 7 "" NA07048,NA10839,NA10863,NA12740,NA12872,NA18504,NA18537,NA18552,NA18564,NA18572,NA18972,NA19144,NA19173,NA19221 nsv508722 1 782539 808693 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619756 M 4 1 0 "" NA10860 nsv510950 1 782539 811962 OTHER complex Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621648,nssv624357 M 4 0 0 "" NA15510,NA18994 nsv949808 1 788521 791820 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997115 M 1 1 0 "" BILGI_BIOE nsv513729 1 788752 791557 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626981 M 1 1 0 "" 1 nsv544880 1 788920 790357 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707630 M 17421 1 0 "" dgv4n54 1 788920 791657 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544882,nsv544881,nsv544888,nsv544884,nsv544883,nsv544886 M 17421 12 0 "" esv26272 1 788934 791865 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17593 M 40 0 4 "" NA11894,NA12006,NA12287,NA12828 nsv820807 1 788934 791865 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420291 M 1 1 0 "" NA10851 dgv5n54 1 789139 791414 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544887,nsv544885,nsv544890,nsv544891 M 17421 23 5 "" nsv544889 1 789469 791018 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707648 M 17421 0 1 "" nsv544892 1 790029 791414 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707672 M 17421 0 1 "" nsv544893 1 790357 817186 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707673 M 17421 0 1 "" esv2713915 1 791340 791757 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6921667,essv6961443 M 96 0 2 "" SSM018,SSM027 esv2656593 1 803238 806726 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5805894 M 1151 0 1 "" NA19000 nsv945734 1 803534 859995 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752018,nssv1752049,nssv1751999,nssv1751984,nssv1752032,nssv1752057,nssv1752039,nssv1752058,nssv1752031,nssv1751982,nssv1752046,nssv1751998,nssv1752004,nssv1751988,nssv1752044,nssv1751991,nssv1752001,nssv1751994,nssv1752034,nssv1751986,nssv1752016,nssv1752050,nssv1752048,nssv1751989,nssv1752040,nssv1751995,nssv1752017,nssv1751997,nssv1752013,nssv1751981,nssv1752008,nssv1752055,nssv1752000,nssv1751990,nssv1752056,nssv1752052,nssv1752047,nssv1752053,nssv1752009,nssv1751996,nssv1752011,nssv1752054,nssv1752033,nssv1751980,nssv1752030,nssv1751985,nssv1752003,nssv1752051,nssv1752015,nssv1751987,nssv1752035,nssv1751992,nssv1752005,nssv1751993,nssv1752043,nssv1751983,nssv1752024,nssv1752020,nssv1752014,nssv1752012,nssv1752002,nssv1752023,nssv1752022,nssv1752045,nssv1752010,nssv1752028,nssv1752038,nssv1752019,nssv1752042,nssv1752025,nssv1752041,nssv1752026,nssv1752029,nssv1752006,nssv1752007,nssv1752027,nssv1752037,nssv1751979,nssv1752036,nssv1752021 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv1n67 1 811028 914557 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv823919,nsv821697,nsv822808 M 31 4 0 "" NA18564,NA18947,NA18951,NA18972 dgv1e55 1 817186 864083 CNV gain Pinto_et_al_2007 17911159 SNP array esv34886,esv34681 M 771 4 0 "" NA18620,NA18947 nsv517709 1 817186 1275912 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv670683,nssv681209,nssv667239,nssv688100,nssv668090,nssv654371,nssv658652,nssv680332,nssv691743,nssv660727,nssv700902,nssv657472,nssv662132,nssv652918,nssv677805,nssv677935,nssv669544,nssv662754,nssv683576 M 2026 18 1 "" esv27271 1 818813 827242 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14965 M 40 1 0 "" NA18916 nsv950386 1 818821 823720 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997126 M 1 0 1 "" BILGI_BIOE esv33946 1 818825 844376 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv101171,essv96332 M 51 2 0 "" 21618,22371 esv2713916 1 820291 821443 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6967856,essv6675156,essv6972236,essv6675157,essv6828947,essv6703800,essv6846928,essv6946436,essv6909990,essv6937615,essv6941722,essv6682789,essv6950479,essv6714176,essv6821118,essv6925638,essv6836112,essv6813123,essv6679102,essv6710539,essv6961444,essv6892259,essv6902471,essv6839905,essv6917364,essv6780792,essv6913942,essv6832527,essv6859129,essv6876308 M 96 0 29 "" SSM012,SSM013,SSM015,SSM016,SSM017,SSM019,SSM022,SSM023,SSM024,SSM025,SSM027,SSM028,SSM029,SSM032,SSM033,SSM034,SSM040,SSM042,SSM043,SSM068,SSM077,SSM079,SSM081,SSM082,SSM083,SSM084,SSM086,SSM088,SSM098 dgv1e201 1 820868 823461 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2746029,esv2725027 M 96 0 38 "" SSM003,SSM009,SSM016,SSM017,SSM020,SSM024,SSM026,SSM027,SSM031,SSM032,SSM033,SSM039,SSM043,SSM045,SSM047,SSM049,SSM055,SSM056,SSM058,SSM066,SSM067,SSM069,SSM070,SSM071,SSM073,SSM079,SSM083,SSM085,SSM086,SSM087,SSM088,SSM091,SSM093,SSM094,SSM095,SSM096,SSM098,SSM100 esv1032937 1 820887 820887 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3703690 M 2 1 0 "" HuRef esv2736138 1 820921 820974 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6846928 M 96 0 1 "" SSM086 esv2743807 1 820932 821191 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6675157,essv6859129 M 96 0 2 "" SSM032,SSM088 esv2744918 1 820960 821052 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6859129 M 96 0 1 "" SSM088 esv2747140 1 822484 822661 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6773385 M 96 0 1 "" SSM066 nsv442837 1 830721 874393 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617835,nssv1616613,nssv1616724,nssv1618057,nssv1617391,nssv1618168,nssv1617946,nssv1616612,nssv1617502,nssv1617613,nssv1617724 M 270 10 1 "" NA18564,NA18571,NA18572,NA18573,NA18620,NA18635,NA18947,NA18951,NA18972,NA18976,NA18990 esv2748251 1 831028 833732 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6759010,essv6695432 M 96 0 2 "" SSM006,SSM061 esv2661847 1 831213 833732 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6287654,essv5935659,essv6509658,essv5707758,essv6276121,essv5632149,essv6563096,essv5520084,essv6512898,essv5803927,essv6309202,essv5523850,essv6482771,essv5809976,essv6555045,essv5758742,essv6418188,essv5403827,essv6295988,essv5781826,essv6355316,essv5557684,essv6542198,essv6060841,essv6345187,essv5654029,essv5451591,essv5900400,essv6027023,essv6047722,essv5500219,essv5952876,essv5813808,essv6041253,essv5469214,essv6021317,essv5519573,essv5448104,essv6192957,essv5616233,essv5518894,essv5590254,essv6064913,essv5901179,essv6030252,essv6137789,essv6067864,essv5583588,essv5539265 M 1151 0 49 "" HG00448,HG00463,HG00512,HG00513,HG00553,HG00557,HG00583,HG00584,HG00608,HG00614,HG00620,HG00651,HG00663,HG00690,HG01066,HG01204,HG01359,HG01494,NA18553,NA18557,NA18564,NA18565,NA18573,NA18592,NA18595,NA18609,NA18613,NA18620,NA18873,NA18951,NA18964,NA18984,NA18985,NA18990,NA18999,NA19004,NA19066,NA19070,NA19074,NA19080,NA19083,NA19087,NA19213,NA19239,NA19461,NA19473,NA19655,NA19657,NA19747 esv2762248 1 833413 855630 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007410 M 1109 0 1 "" SW_1162 nsv298 1 837019 857279 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3151 M 9 1 0 "" NA12878 esv2749362 1 839372 839429 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6853155 M 96 0 1 "" SSM087 esv2713917 1 839379 839541 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6967857,essv6846930,essv6929011,essv6876319 M 96 0 4 "" SSM012,SSM020,SSM028,SSM086 esv2715028 1 839486 839546 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954639 M 96 0 1 "" SSM026 esv2663916 1 841389 856501 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6345413,essv5463605,essv6143600,essv5826571,essv6094713,essv6020202,essv6257481 M 1151 0 7 "" HG01350,HG01357,HG01359,HG01374,HG01375,HG01389,HG01491 nsv832980 1 848279 1007037 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443740 M 95 1 0 "" esv2716139 1 853553 853822 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6950480 M 96 0 1 "" SSM025 esv1517733 1 853641 853690 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4242314 M 2 0 1 "" HuRef nsv508924 1 854379 884949 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619757 M 4 1 0 "" NA10860 nsv945735 1 859995 861242 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752066,nssv1752129,nssv1752064,nssv1752106,nssv1752071,nssv1752079,nssv1752139,nssv1752081,nssv1752062,nssv1752112,nssv1752144,nssv1752095,nssv1752068,nssv1752098,nssv1752145,nssv1752107,nssv1752137,nssv1752105,nssv1752061,nssv1752149,nssv1752142,nssv1752116,nssv1752069,nssv1752127,nssv1752070,nssv1752130,nssv1752074,nssv1752135,nssv1752065,nssv1752131,nssv1752067,nssv1752125,nssv1752138,nssv1752093,nssv1752077,nssv1752132,nssv1752140,nssv1752086,nssv1752060,nssv1752146,nssv1752076,nssv1752155,nssv1752141,nssv1752153,nssv1752075,nssv1752120,nssv1752072,nssv1752151,nssv1752078,nssv1752092,nssv1752136,nssv1752148,nssv1752073,nssv1752152,nssv1752063,nssv1752091,nssv1752089,nssv1752097,nssv1752096,nssv1752088,nssv1752083,nssv1752126,nssv1752154,nssv1752111,nssv1752087,nssv1752123,nssv1752080,nssv1752094,nssv1752084,nssv1752109,nssv1752115,nssv1752119,nssv1752110,nssv1752082,nssv1752118,nssv1752113,nssv1752133,nssv1752122,nssv1752124,nssv1752104,nssv1752121,nssv1752090,nssv1752108,nssv1752100,nssv1752147,nssv1752085,nssv1752150,nssv1752134,nssv1752099,nssv1752128,nssv1752117,nssv1752059,nssv1752143,nssv1752114,nssv1752101,nssv1752102,nssv1752103 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945738 1 861242 865934 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752228,nssv1752199,nssv1752226,nssv1752201,nssv1752159,nssv1752182,nssv1752162,nssv1752176,nssv1752234,nssv1752223,nssv1752164,nssv1752209,nssv1752165,nssv1752193,nssv1752168,nssv1752225,nssv1752227,nssv1752191,nssv1752158,nssv1752214,nssv1752163,nssv1752187,nssv1752232,nssv1752210,nssv1752171,nssv1752198,nssv1752167,nssv1752203,nssv1752160,nssv1752233,nssv1752235,nssv1752221,nssv1752174,nssv1752205,nssv1752157,nssv1752216,nssv1752230,nssv1752204,nssv1752173,nssv1752196,nssv1752229,nssv1752195,nssv1752166,nssv1752222,nssv1752231,nssv1752202,nssv1752169,nssv1752183,nssv1752172,nssv1752200,nssv1752175,nssv1752156,nssv1752170,nssv1752217,nssv1752161,nssv1752213,nssv1752189,nssv1752178,nssv1752211,nssv1752220,nssv1752192,nssv1752181,nssv1752190,nssv1752224,nssv1752206,nssv1752219,nssv1752185,nssv1752208,nssv1752215,nssv1752194,nssv1752188,nssv1752184,nssv1752177,nssv1752197,nssv1752180,nssv1752179,nssv1752186,nssv1752207,nssv1752218,nssv1752212 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945739 1 865934 891159 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749314,nssv1753207,nssv1749323,nssv1753199,nssv1752241,nssv1753213,nssv1749318,nssv1753215,nssv1749322,nssv1753205,nssv1752239,nssv1753209,nssv1752245,nssv1753230,nssv1752248,nssv1752259,nssv1752242,nssv1753210,nssv1749319,nssv1749327,nssv1752238,nssv1749309,nssv1749313,nssv1753204,nssv1752247,nssv1749328,nssv1752240,nssv1753187,nssv1752243,nssv1753212,nssv1749316,nssv1753232,nssv1752246,nssv1749310,nssv1752252,nssv1753229,nssv1749320,nssv1749325,nssv1752244,nssv1753192,nssv1752253,nssv1753185,nssv1752254,nssv1749312,nssv1752237,nssv1753198,nssv1749317,nssv1749331,nssv1752251,nssv1753211,nssv1752249,nssv1753188,nssv1752250,nssv1753218,nssv1752255,nssv1752256,nssv1749329,nssv1753225,nssv1753226,nssv1752236,nssv1753196,nssv1753222,nssv1753203,nssv1752257,nssv1753224,nssv1753201,nssv1753202,nssv1749321,nssv1753220,nssv1753214,nssv1749332,nssv1753206,nssv1752258,nssv1753208,nssv1753190,nssv1753194,nssv1749334,nssv1749311,nssv1749333,nssv1753184,nssv1753200,nssv1753195,nssv1753219,nssv1753228,nssv1753189,nssv1753223,nssv1753227,nssv1753231,nssv1753193,nssv1753217,nssv1753197,nssv1753216,nssv1749330,nssv1753191,nssv1749324,nssv1753186,nssv1753221 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1069885 1 866871 866871 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3978908 M 2 1 0 "" HuRef nsv428334 1 874371 1220569 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv450908 M 62 1 0 "" HGDP00467 esv3325034 1 875693 876699 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652099 M 185 1 0 "" NA19240 esv991325 1 875697 876458 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564868 M 3 1 0 "" HuRef dgv2n67 1 877618 1426500 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825030,nsv826141 M 31 2 0 "" NA18968,NA18969 nsv950387 1 879721 890820 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997137 M 1 1 0 "" BILGI_BIOE esv3382589 1 885423 885475 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740932 M 185 1 0 "" NA12878 esv3358119 1 887473 887481 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863667,essv7863668 M 185 2 0 "" NA12005,NA18953 esv3400943 1 889673 889673 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825303 M 185 1 0 "" NA19240 nsv945562 1 891159 898829 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572183,nssv2572170,nssv2572191,nssv2572172,nssv2572186,nssv2572155,nssv2572157,nssv2572153,nssv2572175,nssv2572171,nssv2572149,nssv2572176,nssv2572159,nssv2572177,nssv2572174,nssv2572156,nssv2572166,nssv2572167,nssv2572195,nssv2572178,nssv2572163,nssv2572192,nssv2572182,nssv2572168,nssv2572151,nssv2572181,nssv2572164,nssv2572187,nssv2572180,nssv2572169,nssv2572184,nssv2572185,nssv2572188,nssv2572158,nssv2572165,nssv2572173,nssv2572194,nssv2572160,nssv2572190,nssv2572161,nssv2572179,nssv2572162,nssv2572150,nssv2572154,nssv2572152,nssv2572189,nssv2572193,nssv2572196 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv509035 1 891406 985724 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619758,nssv621079 M 4 2 0 "" NA10860,NA15510 nsv950451 1 899421 1094520 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997148 M 1 0 1 "" BILGI_BIOE esv1562509 1 909220 909486 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3716763 M 2 0 1 "" HuRef esv2762302 1 914637 1106320 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7008521 M 1109 1 0 "" SW_1358 dgv6n54 1 917392 934930 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544896,nsv544894 M 17421 0 2 "" nsv544895 1 917392 1054900 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707675 M 17421 0 1 "" nsv544897 1 924665 934930 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707678,nssv707677 M 17421 1 1 "" nsv544898 1 924665 943937 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707679 M 17421 1 0 "" dgv7n54 1 925754 935265 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544900,nsv544899 M 17421 0 5 "" dgv8n54 1 925754 943937 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544901,nsv544907 M 17421 0 2 "" dgv9n54 1 925754 952840 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544902,nsv544903 M 17421 0 2 "" nsv544904 1 929558 934877 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707688,nssv707689 M 17421 2 0 "" dgv10n54 1 929558 935265 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544905,nsv544906 M 17421 5 7 "" nsv511670 1 933871 935480 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626307 M 1 0 1 "" 1 esv27608 1 933930 934967 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv10036 M 40 24 12 "" NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19257 esv989364 1 934035 934967 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586109 M 3 0 1 "" HuRef dgv11n54 1 934063 934877 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544915,nsv544909,nsv544908,nsv544920,nsv544916 M 17421 0 8 "" dgv12n54 1 934063 934930 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544911,nsv544910,nsv544917,nsv544927,nsv544922,nsv544921,nsv544926 M 17421 99 267 "" dgv13n54 1 934063 935265 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544912,nsv544923 M 17421 6 24 "" dgv14n54 1 934063 938178 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544913,nsv544929,nsv544918 M 17421 4 0 "" dgv15n54 1 934063 943937 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544914,nsv544933,nsv544925 M 17421 0 17 "" esv1732269 1 934091 934203 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4110931 M 2 0 1 "" HuRef esv2853903 1 934147 934959 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123470 M 1 0 1 "" HuRef nsv955441 1 934164 934920 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000435 M 1 0 1 "" BILGI_BIOE nsv544919 1 934170 934654 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv707992,nssv708093,nssv707910,nssv707819,nssv707966,nssv707994,nssv707939,nssv708008,nssv708067,nssv708048,nssv707896,nssv707995,nssv707868,nssv707959,nssv708082,nssv708013,nssv707958,nssv707923,nssv707920,nssv707850,nssv707946,nssv707834,nssv707974,nssv707841,nssv707979,nssv707964,nssv708021,nssv707838,nssv708049,nssv707948,nssv707976,nssv707820,nssv707924,nssv708046,nssv708000,nssv707875,nssv707827,nssv708094,nssv707851,nssv708066,nssv707891,nssv708073,nssv708009,nssv707972,nssv707922,nssv707833,nssv707921,nssv708003,nssv707844,nssv707938,nssv707824,nssv707914,nssv708091,nssv707977,nssv707870,nssv707883,nssv707984,nssv707853,nssv707904,nssv708016,nssv707901,nssv707828,nssv707916,nssv707934,nssv707903,nssv707818,nssv708047,nssv707947,nssv707973,nssv707967,nssv707881,nssv708018,nssv707905,nssv707821,nssv708028,nssv707908,nssv707840,nssv707846,nssv707961,nssv708055,nssv708042,nssv707917,nssv707930,nssv707890,nssv707835,nssv707879,nssv707866,nssv707996,nssv707893,nssv708011,nssv707955,nssv707887,nssv707871,nssv707837,nssv708019,nssv707885,nssv707986,nssv707990,nssv707874,nssv707970,nssv707956,nssv707823,nssv707941,nssv708068,nssv708031,nssv708036,nssv708089,nssv708029,nssv708033,nssv707965,nssv707869,nssv707831,nssv707968,nssv708006,nssv707935,nssv707865,nssv708001,nssv707832,nssv707937,nssv708039,nssv708090,nssv707963,nssv708014,nssv707900,nssv707843,nssv708084,nssv707829,nssv708078,nssv708070,nssv708079,nssv708080,nssv708040,nssv707957,nssv707907,nssv707951,nssv708037,nssv707999,nssv707944,nssv708065,nssv707854,nssv708007,nssv707950,nssv707873,nssv707899,nssv708038,nssv708083,nssv707940,nssv707857,nssv708030,nssv707982,nssv707863,nssv708074,nssv707919,nssv707969,nssv708002,nssv707913,nssv708041,nssv708020,nssv708060,nssv707825,nssv707918,nssv707886,nssv707852,nssv708025,nssv707872,nssv708086,nssv707997,nssv708087,nssv707878,nssv707954,nssv707949,nssv708072,nssv707847,nssv708034,nssv707839,nssv707926,nssv707842,nssv707953,nssv707981,nssv708088,nssv707822,nssv707898,nssv708010,nssv708032,nssv707895,nssv707998,nssv708022,nssv707960,nssv708044,nssv707856,nssv707952,nssv708081,nssv708059,nssv707906,nssv708054,nssv708035,nssv707980,nssv707882,nssv707860,nssv707927,nssv707975,nssv708005,nssv708051,nssv707928,nssv707858,nssv707889,nssv707985,nssv707912,nssv708045,nssv708071,nssv708077,nssv707859,nssv707864,nssv708092,nssv708052,nssv708085,nssv708063,nssv707915,nssv707877,nssv707845,nssv707988,nssv707971,nssv707849,nssv708043,nssv708075,nssv707897,nssv708061,nssv707931,nssv707983,nssv708023,nssv708026,nssv707991,nssv708069,nssv708024,nssv707962,nssv707933,nssv707848,nssv707867,nssv708053,nssv707861,nssv708017,nssv707862,nssv707942,nssv707932,nssv708076,nssv707884,nssv707880,nssv708004,nssv707826,nssv708027,nssv708012,nssv707817,nssv707945,nssv707902,nssv708058,nssv707909,nssv708064,nssv707888,nssv707993,nssv707943,nssv708057,nssv707855,nssv707894,nssv708015,nssv707987,nssv707978,nssv707936,nssv707836,nssv707892,nssv707989,nssv708050,nssv707929,nssv707830,nssv708056,nssv707925,nssv708062,nssv707911,nssv707876 M 17421 0 278 "" nsv544924 1 934170 938178 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708370,nssv708368,nssv708373,nssv708369,nssv708371,nssv708372 M 17421 1 5 "" esv1062785 1 934216 934944 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4275138 M 2 0 1 "" HuRef nsv544928 1 934223 935265 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708410 M 17421 1 0 "" nsv544930 1 934429 934930 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708420,nssv708437,nssv708415,nssv708434,nssv708438,nssv708414,nssv708439,nssv708430,nssv708418,nssv708427,nssv708432,nssv708441,nssv708428,nssv708425,nssv708422,nssv708413,nssv708423,nssv708433,nssv708436,nssv708412,nssv708431,nssv708440,nssv708435,nssv708416,nssv708419,nssv708429,nssv708417,nssv708421,nssv708426,nssv708424 M 17421 0 30 "" dgv16n54 1 934429 935265 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544934,nsv544931 M 17421 0 9 "" nsv544932 1 934429 938178 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708450 M 17421 0 1 "" esv2066434 1 936113 936487 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4643302 M 1 0 1 "" NA18507 esv2663451 1 938037 938669 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5748399,essv5733502,essv5957539,essv6117771 M 1151 0 4 "" HG00543,NA18544,NA19012,NA19074 dgv13e59 1 949809 950807 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3364706,esv3428898 M 185 2 0 "" NA19239,NA19240 nsv482036 1 960587 965715 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558397 M 1 1 0 "" KB1 esv1003697 1 964631 964705 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568238 M 3 0 1 "" HuRef nsv159315 1 964769 964844 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177893 M 24 "" esv3451859 1 969109 970007 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692422 M 185 1 0 "" NA19239 esv1001028 1 975675 978354 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565170 M 3 1 0 "" HuRef esv2670613 1 976265 979812 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5495292,essv6085046,essv5864207,essv6005729,essv6598157,essv5787081,essv5718556,essv5712285,essv5462014,essv6402564,essv6436893,essv5471639,essv5821063,essv6521104,essv6099101,essv5477110,essv5973675,essv5486053,essv6480331,essv5768893,essv6255541,essv6279545,essv6325639,essv5441563,essv6553074,essv5738531,essv6389326,essv6324543,essv5703177,essv5723792,essv6370075,essv5615197,essv5710426,essv5475375,essv5975232,essv5684098,essv5804523,essv6314870,essv6526343,essv5779263,essv6442790,essv6099762,essv5781640,essv6068647,essv6313757,essv5703730,essv6185252,essv5724880,essv6469348,essv5762189,essv5773855,essv6327051,essv5680397,essv6379774,essv5905036,essv5833597,essv6159415,essv6467493,essv6430927,essv5681970,essv6585690,essv5789556,essv5452156,essv6134181,essv5535610,essv5889195,essv6267868,essv6330051,essv6443495,essv5601933,essv6102802,essv5914563,essv6418259,essv5963116,essv5841281,essv6560863,essv5836989,essv6483725,essv5422914,essv6430407,essv5944648,essv6423047,essv5467419,essv6505246,essv6523376,essv6387100,essv5541532,essv6227956,essv5955626,essv6237379,essv6191383,essv6400366,essv5861730,essv6199706,essv6016618,essv5871535,essv6338447,essv6204209,essv6010738,essv6376621,essv6480133,essv5442020,essv6109108,essv6078680,essv5563021,essv6191793,essv6021580,essv5572747,essv6536645,essv6317482,essv5489577,essv6535946,essv6263431,essv5911759,essv5778222,essv6284507,essv6128474,essv6555599,essv5615808,essv5962986,essv6263463,essv6327372,essv5840689,essv5869388,essv6189900,essv6587307,essv6464009,essv5564928,essv5419278,essv5854734,essv6150879,essv5620498,essv5500942,essv5506395,essv6187040,essv6449523,essv6186898,essv5641324,essv5584422,essv6042185,essv5567082,essv5905964,essv6502636,essv5993200,essv5925242,essv5482863 M 1151 0 146 "" NA18526,NA18530,NA18532,NA18534,NA18535,NA18536,NA18538,NA18539,NA18541,NA18542,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18553,NA18555,NA18557,NA18558,NA18559,NA18560,NA18561,NA18563,NA18565,NA18566,NA18567,NA18570,NA18573,NA18574,NA18576,NA18577,NA18579,NA18592,NA18593,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18605,NA18606,NA18608,NA18609,NA18610,NA18611,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18621,NA18622,NA18623,NA18624,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18940,NA18941,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18950,NA18951,NA18952,NA18953,NA18956,NA18961,NA18964,NA18965,NA18967,NA18968,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18980,NA18981,NA18982,NA18983,NA18984,NA18985,NA18986,NA18987,NA18988,NA18989,NA18990,NA18999,NA19000,NA19003,NA19004,NA19005,NA19007,NA19009,NA19012,NA19054,NA19055,NA19056,NA19058,NA19059,NA19062,NA19063,NA19065,NA19066,NA19067,NA19068,NA19070,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19082,NA19083,NA19084,NA19085,NA19087,NA19088 esv1165796 1 976898 977928 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4038215 M 2 0 1 "" HuRef esv997839 1 993301 995384 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565560 M 3 0 1 "" HuRef nsv159328 1 996285 996350 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177906 M 24 "" esv1776849 1 996400 996400 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3713900 M 2 1 0 "" HuRef nsv159419 1 996601 996731 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177997 M 24 "" nsv827252 1 998725 1001127 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436318 M 31 1 0 "" NA18542 nsv945741 1 1007194 1092619 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749448,nssv1749434,nssv1749382,nssv1749433,nssv1749451,nssv1749442,nssv1749373,nssv1749390,nssv1749376,nssv1749397,nssv1749453,nssv1749400,nssv1749365,nssv1749464,nssv1749380,nssv1749398,nssv1749368,nssv1749437,nssv1749384,nssv1749389,nssv1749457,nssv1749446,nssv1749371,nssv1749445,nssv1749364,nssv1749402,nssv1749458,nssv1749413,nssv1749366,nssv1749408,nssv1749454,nssv1749469,nssv1749447,nssv1749459,nssv1749375,nssv1749385,nssv1749455,nssv1749409,nssv1749378,nssv1749420,nssv1749377,nssv1749441,nssv1749379,nssv1749468,nssv1749367,nssv1749430,nssv1749381,nssv1749425,nssv1749452,nssv1749439,nssv1749374,nssv1749399,nssv1749370,nssv1749443,nssv1749369,nssv1749412,nssv1749422,nssv1749393,nssv1749462,nssv1749395,nssv1749428,nssv1749396,nssv1749421,nssv1749407,nssv1749419,nssv1749463,nssv1749391,nssv1749410,nssv1749426,nssv1749435,nssv1749444,nssv1749363,nssv1749465,nssv1749466,nssv1749432,nssv1749424,nssv1749431,nssv1749401,nssv1749386,nssv1749406,nssv1749418,nssv1749456,nssv1749404,nssv1749460,nssv1749429,nssv1749436,nssv1749388,nssv1749415,nssv1749414,nssv1749417,nssv1749392,nssv1749411,nssv1749387,nssv1749467,nssv1749440,nssv1749423,nssv1749403 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv828363 1 1009300 1013396 CNV gain+loss Park_et_al_2010 20364138 Oligo aCGH nssv1436320,nssv1434856 M 31 1 1 "" NA18542,NA18942 nsv509146 1 1010510 1111188 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619759,nssv621080 M 4 2 0 "" NA10860,NA15510 esv2665646 1 1011741 1012621 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6082937,essv5634163,essv6062495 M 1151 0 3 "" NA19338,NA19359,NA19401 dgv17n54 1 1014228 1029058 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544935,nsv544936 M 17421 0 2 "" esv29017 1 1028279 1029100 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19930 M 40 0 6 "" NA11931,NA12044,NA12414,NA12749,NA12776,NA19240 esv987912 1 1028440 1029100 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586137 M 3 0 1 "" HuRef esv4415 1 1028458 1029187 CNV loss Wang_et_al_2008 18987735 Sequencing essv26856 M 1 0 1 "" YH nsv544937 1 1028484 1032208 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708455 M 17421 0 1 "" dgv18n54 1 1028484 1038387 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544939,nsv544938,nsv544943,nsv544942 M 17421 0 15 "" dgv19n54 1 1028484 1045080 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544940,nsv544944 M 17421 0 2 "" esv2674475 1 1028491 1029101 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6048979,essv6434262,essv5515175,essv6032236,essv5718506,essv5824591,essv6168761,essv5694805,essv6463649,essv5759307,essv6573154,essv6198018,essv5729992,essv5657075,essv5515257,essv6027655,essv6510454,essv6504358,essv5821062,essv6412237,essv6336428,essv5992380,essv5741053,essv5758458,essv6386003,essv5722499,essv5770283,essv5586667,essv6425065,essv6461709,essv5763678,essv6461713,essv5670392,essv6241223,essv6043080,essv5462103,essv6498080,essv5700798,essv6117995,essv6085598,essv6320707,essv6445789,essv5993590,essv5795116,essv6275093,essv6474371,essv6362474,essv5964725,essv6479044,essv5714107,essv6096713,essv6332345,essv5700942,essv6418029,essv6031648,essv6261205,essv6293236,essv5466613,essv5803925,essv5750218,essv5978321,essv6019519,essv5809115,essv5789270,essv5819882,essv5734294,essv5613816,essv5397305,essv6559100,essv6424714,essv5929362,essv6572780,essv5765836,essv6001928,essv5782186,essv5829646,essv6338714,essv5717079,essv5819196,essv5519265,essv5456064,essv6178153,essv6239917,essv6152898,essv6579614,essv5771704,essv6460718,essv6453590,essv5793300,essv5775808,essv5680961,essv6000145,essv6352021,essv6071729,essv5766055,essv6261633,essv6512480,essv6029294,essv6412469,essv6535245,essv6482402,essv6150676,essv5525377,essv5987883,essv6283772,essv6211448,essv5438152,essv6401814,essv6154985,essv6371427,essv5929634,essv6123918,essv6269485,essv6427750,essv5552270,essv6022508,essv5544079,essv6368059,essv5958628,essv5607932,essv5620395,essv5574524,essv6105732,essv6349109,essv5987847,essv5885638,essv6030509,essv6221043,essv6054853,essv5870748,essv5977948,essv5596252,essv5674953,essv5597778,essv6168477,essv6273537,essv5629256,essv5448884,essv5443079,essv6070502,essv5512746,essv5942233,essv6471857,essv6584245,essv6051709,essv5672078,essv6462535,essv5543982,essv5915311,essv5493240,essv6286261,essv5579307,essv5460067,essv6018657,essv6510298,essv6069837,essv6158394,essv5885429,essv6183968,essv5441289,essv6337876,essv5533171,essv6450578,essv5601728,essv6339703,essv6054536,essv6510320,essv6493518,essv5600714,essv6212079,essv5615962,essv6467904,essv5589591,essv5491037,essv6229256,essv6243124,essv5853566,essv5916857,essv6016807,essv6192230,essv6175781,essv6301862,essv6147838,essv5614201,essv6432453,essv5912544,essv6452440,essv6215092,essv5994815,essv6197707,essv6379238,essv6325568,essv5484641,essv6347242,essv6177663,essv5578565,essv5607185,essv5464919,essv6204902,essv5980381,essv6262010,essv6067524,essv5509723,essv5870935,essv5666985,essv5655999,essv6197367,essv5534660,essv6596508,essv5840741 M 1151 0 210 "" HG00108,HG00116,HG00123,HG00124,HG00125,HG00136,HG00137,HG00138,HG00140,HG00146,HG00151,HG00159,HG00160,HG00173,HG00180,HG00185,HG00187,HG00231,HG00237,HG00242,HG00245,HG00246,HG00247,HG00250,HG00251,HG00252,HG00253,HG00268,HG00273,HG00274,HG00275,HG00276,HG00277,HG00280,HG00281,HG00306,HG00310,HG00311,HG00319,HG00323,HG00325,HG00326,HG00327,HG00328,HG00342,HG00345,HG00353,HG00357,HG00361,HG00366,HG00367,HG00375,HG00419,HG00443,HG00449,HG00463,HG00500,HG00534,HG00537,HG00554,HG00565,HG00581,HG00590,HG00607,HG00608,HG00614,HG00640,HG00641,HG00654,HG00693,HG00699,HG00702,HG00708,HG00731,HG00732,HG00734,HG00736,HG00740,HG01047,HG01048,HG01052,HG01061,HG01070,HG01082,HG01124,HG01133,HG01134,HG01148,HG01197,HG01250,HG01334,HG01350,HG01353,HG01354,HG01359,HG01365,HG01366,HG01374,HG01375,HG01389,HG01390,HG01437,HG01456,HG01461,HG01489,HG01518,HG01522,HG01551,NA06984,NA06986,NA06989,NA11830,NA11919,NA11994,NA11995,NA12283,NA12342,NA12348,NA12546,NA12718,NA12763,NA12777,NA12842,NA18530,NA18536,NA18542,NA18545,NA18549,NA18557,NA18565,NA18566,NA18570,NA18571,NA18573,NA18576,NA18577,NA18582,NA18592,NA18610,NA18611,NA18613,NA18616,NA18619,NA18632,NA18856,NA18861,NA18912,NA18947,NA18950,NA18980,NA18987,NA18989,NA18999,NA19003,NA19055,NA19057,NA19075,NA19076,NA19077,NA19078,NA19082,NA19084,NA19197,NA19316,NA19327,NA19347,NA19355,NA19371,NA19375,NA19439,NA19445,NA19451,NA19453,NA19462,NA19463,NA19471,NA19473,NA19648,NA19676,NA19703,NA19707,NA19722,NA19723,NA19780,NA19834,NA19904,NA19982,NA20276,NA20291,NA20346,NA20508,NA20510,NA20513,NA20516,NA20517,NA20525,NA20530,NA20531,NA20532,NA20539,NA20582,NA20585,NA20752,NA20756,NA20766,NA20778,NA20783,NA20796,NA20799,NA20808 dgv20n54 1 1028586 1029058 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544946,nsv544945,nsv544941 M 17421 0 31 "" esv2853792 1 1028634 1029122 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123359 M 1 0 1 "" HuRef esv6517 1 1029380 1030199 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28958 M 1 0 0 "" dgv14e59 1 1029709 1031607 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3385140,esv3441341 M 185 2 0 "" NA19239,NA19240 esv1064309 1 1030615 1030615 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3670093 M 2 1 0 "" HuRef nsv829425 1 1056042 1058477 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434857 M 31 0 1 "" NA18942 nsv544947 1 1070426 1306704 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708504 M 17421 0 1 "" nsv470680 1 1070426 1378635 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547648,nssv547649,nssv547650 M 443 0 3 "" HGDP00661,HGDP00825,HGDP00978 esv25577 1 1075808 1079448 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14645 M 40 1 11 "" NA11993,NA12489,NA12878,NA18502,NA18511,NA18916,NA19099,NA19108,NA19129,NA19147,NA19190,NA19240 esv998069 1 1075868 1079303 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586245 M 3 1 0 "" HuRef dgv21n54 1 1075898 1079023 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544948,nsv544949 M 17421 0 2 "" nsv544950 1 1077300 1079245 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708507,nssv708508 M 17421 0 2 "" nsv1409 1 1095471 1124685 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4677 M 9 1 0 "" NA19129 dgv15e59 1 1098909 1100007 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3385108,esv3352473 M 185 2 0 "" NA19238,NA19240 esv1010559 1 1099028 1099823 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586664 M 3 1 0 "" HuRef esv23529 1 1099028 1099823 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10745 M 40 24 0 "" NA06985,NA12414,NA12749,NA12776,NA12828,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 nsv544951 1 1099051 1099752 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708513,nssv708510,nssv708509,nssv708512,nssv708511 M 17421 5 0 "" esv1281251 1 1099635 1099635 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4028372 M 2 1 0 "" HuRef nsv950452 1 1106921 1637538 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997159 M 1 0 1 "" BILGI_BIOE nsv160439 1 1108835 1109145 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179017 M 24 "" esv32594 1 1116308 1116446 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv92767,essv96399 M 51 0 2 "" 21944,22371 nsv160193 1 1123534 1123613 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178771 M 24 "" esv3429749 1 1134452 1134879 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652034 M 185 1 0 "" NA19240 esv2630187 1 1137696 1141586 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5357752 M 1 0 1 "" NA18507 esv26506 1 1138999 1140737 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13049 M 40 17 0 "" NA11894,NA12287,NA12414,NA12489,NA12749,NA15510,NA18502,NA18508,NA18517,NA18858,NA18861,NA18909,NA19099,NA19129,NA19147,NA19225,NA19257 nsv544953 1 1139144 1140498 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708515 M 17421 0 1 "" dgv22n54 1 1139144 1140600 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544955,nsv544952 M 17421 2 0 "" nsv544954 1 1139244 1186414 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708516 M 17421 0 1 "" nsv161017 1 1140527 1140709 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179595 M 24 "" nsv469848 1 1146082 1322235 CNV gain Locke_et_al_2006 16826518 BAC aCGH nssv1674548,nssv1672390,nssv1676561,nssv1674068,nssv1672094,nssv1674359,nssv1675314,nssv1675776,nssv1673566,nssv1674008,nssv1675446,nssv1672467,nssv1674236,nssv1676113,nssv1672366,nssv1675837,nssv1674168,nssv1674296,nssv1673850,nssv1675375,nssv1675739,nssv1672102,nssv1675327,nssv1674135,nssv1672854,nssv1673518,nssv1673400,nssv1672396,nssv1675455,nssv1676397,nssv1672602,nssv1673131,nssv1672307,nssv1672738,nssv1676489,nssv1674019,nssv1674020,nssv1673733,nssv1674115,nssv1675619,nssv1675926,nssv1673267,nssv1673413,nssv1676084,nssv1672244,nssv1676085,nssv1673139,nssv1673022,nssv1674285,nssv1672249,nssv1675676,nssv1673798,nssv1675092,nssv1676596,nssv1675128,nssv1676663,nssv1674154,nssv1672626 M 265 58 0 "" esv2661109 1 1147144 1147360 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5709461,essv6472005,essv5752766,essv6539385,essv5439413,essv6421375,essv5620762,essv6312301,essv6109554,essv5558210,essv6174128,essv5909645,essv5505211,essv5855617,essv5486707,essv5914448,essv6113329 M 1151 0 17 "" NA18499,NA18501,NA18502,NA18909,NA19099,NA19257,NA19360,NA19381,NA19382,NA19397,NA19403,NA19428,NA19439,NA19457,NA19704,NA19819,NA19920 esv2524046 1 1148387 1153424 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5287439 M 1 0 1 "" NA18507 esv2587289 1 1149443 1155560 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5220272 M 1 0 1 "" NA18507 esv2317109 1 1151270 1151801 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4717325 M 1 0 1 "" NA18507 esv2658760 1 1151437 1151643 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6584683,essv5556663,essv6549704,essv5752437,essv6500540,essv5458632,essv6330566,essv5681798,essv6552168,essv6120409,essv6185848,essv6109219,essv6170234,essv5956005,essv6205532,essv5524307,essv6151097,essv5802239,essv6154341,essv5758836,essv6175521,essv5747770,essv6530899,essv5726655,essv6580572,essv5551811,essv6218597,essv5787568,essv6558511,essv5990107,essv6472528,essv6112738,essv6246174,essv5957822,essv6593567,essv6005063,essv6504951,essv5832949,essv6191112,essv6073157,essv6441748,essv5636104,essv6352878,essv5721563,essv6397614,essv6031457,essv6362912,essv5706693,essv6285851,essv6096407,essv6590372,essv5964072,essv6312211,essv5789536,essv6364011,essv5459848,essv6322689,essv6079984,essv6213083,essv5667785,essv5547316,essv5437205,essv5562204,essv5543990,essv5967220,essv5850006,essv5511013,essv5605063,essv6034389,essv6046705,essv6056921,essv5458106,essv5991720,essv6108284,essv5898145,essv5623466,essv5950181,essv5436201,essv5474265,essv5541179,essv5979653,essv5930632,essv5594183,essv5641794 M 1151 0 84 "" HG01098,HG01108,HG01171,HG01350,HG01360,HG01462,HG01497,NA11918,NA11992,NA18486,NA18488,NA18498,NA18501,NA18502,NA18504,NA18507,NA18520,NA18522,NA18853,NA18858,NA18861,NA18867,NA18907,NA18908,NA18909,NA18917,NA18933,NA19092,NA19093,NA19099,NA19116,NA19138,NA19144,NA19153,NA19172,NA19190,NA19198,NA19223,NA19225,NA19247,NA19248,NA19313,NA19315,NA19317,NA19319,NA19321,NA19328,NA19347,NA19359,NA19372,NA19373,NA19375,NA19376,NA19377,NA19379,NA19381,NA19382,NA19384,NA19385,NA19390,NA19393,NA19394,NA19397,NA19399,NA19403,NA19443,NA19453,NA19466,NA19474,NA19704,NA19716,NA19758,NA19818,NA19819,NA19835,NA19900,NA19920,NA20278,NA20294,NA20296,NA20299,NA20322,NA20332,NA20336 nsv509257 1 1151955 1189470 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619760 M 4 1 0 "" NA10860 nsv544956 1 1171093 1241217 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708518 M 17421 0 1 "" nsv829536 1 1176767 1177709 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436321 M 31 1 0 "" NA18542 esv3335892 1 1184609 1185007 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691755 M 185 1 0 "" NA19238 esv24081 1 1201623 1202903 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14081 M 40 8 0 "" NA18511,NA18523,NA18861,NA18907,NA18909,NA19099,NA19147,NA19190 nsv544957 1 1201746 1202273 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708519 M 17421 0 1 "" esv3341957 1 1201809 1202607 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691757 M 185 1 0 "" NA19239 dgv23n54 1 1202060 1202731 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544959,nsv544958 M 17421 2 0 "" nsv544960 1 1204036 1207482 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708522 M 17421 0 1 "" dgv24n54 1 1205055 1213515 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544962,nsv544961 M 17421 0 2 "" nsv544963 1 1206945 1214281 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708525 M 17421 0 1 "" esv9332 1 1207123 1207887 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31773 M 1 0 0 "" esv2673981 1 1207339 1207760 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5864128,essv6234077,essv5565444,essv5845678,essv5568792,essv6208875,essv5874172,essv5655953,essv6567171,essv6146097,essv6460871,essv6215106,essv6529541,essv5752385,essv6278709,essv6458867,essv6320340,essv5713207,essv5796220,essv6181789,essv5616249,essv5828027,essv5703075,essv5830102,essv6262943,essv6474836,essv6295641,essv5535991,essv6524753,essv5732879,essv6286183,essv6377477,essv5742494,essv6341849,essv6424641,essv6025649,essv6359108,essv5469789,essv6447551,essv6001217,essv5548255,essv5420730,essv5706433,essv6351628,essv6207338,essv6128686,essv6276421,essv6224800,essv6463915,essv5938008,essv6406899,essv6258016,essv5825826,essv5407641,essv6336469,essv5812347,essv5941170,essv5746960,essv5733303,essv6557644,essv5746061,essv5903725,essv5431171,essv6226006,essv6300674,essv6228976,essv6199767,essv6067469,essv5832123,essv6327643,essv6488935,essv6439682,essv6320910,essv5702989,essv6151804,essv5726618,essv6392240,essv5751448,essv5577785,essv5649812,essv5999100,essv5721341,essv5398394,essv5804443,essv6426568,essv6064219,essv5465256,essv6262209,essv6252430,essv5834192,essv6114438,essv5514109,essv5499361,essv5795930,essv6493220,essv6045437,essv5922588,essv6538862,essv5859573,essv5711626,essv6368260,essv5783493,essv5633920,essv6265257,essv5817051,essv5652419,essv6074043,essv6231889,essv6278188,essv5887860,essv5945444,essv6414667,essv6513521,essv5909372,essv5738934,essv5615034,essv5790385,essv5843050,essv6352121,essv6396964,essv6553185,essv5513375,essv6335967,essv5817920,essv6390017,essv5559627,essv5757575,essv6001694,essv6445344,essv5471503,essv5910221,essv6163227,essv6223357,essv6339144,essv6381288,essv6537251,essv5663198,essv6194663,essv6173656,essv5750987,essv5905120,essv5615345,essv5910672,essv6280172,essv5887466,essv6437407,essv6583114,essv5638447,essv5985350,essv6437150,essv6026203,essv5525837,essv5429106,essv5616664,essv5545854,essv5977635,essv6123419,essv6375782,essv5578606,essv6564758,essv5919286,essv5424544,essv5885998,essv6480469,essv5618107,essv5885018,essv5974899,essv5863471,essv5490777,essv5426116,essv5434081,essv5748924,essv6217750,essv5656577,essv5950163,essv5867308,essv6056766,essv5509795,essv6104290,essv5491686,essv6434770,essv6591878,essv5803129,essv6051065,essv6188254,essv5479850,essv6021886,essv6350182,essv6100913,essv6460089,essv6538666,essv6144046,essv5991660,essv6542299,essv6360631,essv6400391,essv5660197,essv6315900,essv6438293,essv5936962,essv6396639,essv5793601,essv6101186,essv6158659,essv5467091,essv6471445,essv5836591,essv5850739,essv5471121,essv6260022,essv6243422,essv6014100,essv5674877,essv5577522,essv5459892,essv5492773,essv6457377,essv5623261,essv5841447,essv6325266,essv5973359,essv6428860,essv5941008,essv6364636,essv6118569,essv5888259,essv6205811,essv6237721,essv6368218,essv6420303,essv6456001,essv5498166,essv5470790,essv5517206,essv5578554,essv6174159,essv5488749,essv5467001,essv5948251,essv6256029,essv5978628,essv6013025,essv6580334,essv6409217,essv5410354,essv5938197,essv6386945,essv6532865,essv6354596,essv5479749,essv5644417,essv6063198,essv5411481,essv6083679,essv6414705,essv5740683,essv5515576,essv6226909,essv5496017,essv6448880,essv5503996,essv6561033,essv6538355,essv5883227,essv5834705,essv5607310,essv5914728,essv5883717,essv6522474,essv5904698,essv5471360,essv5648964,essv6101258,essv6578498,essv5898963,essv5468369,essv6275996,essv6149675,essv5615341,essv6582863,essv6220846,essv5971444,essv5657226,essv6414527,essv5456664,essv6220496,essv5933284,essv6143825,essv5995640,essv6560586,essv6363574,essv6101279,essv6446815,essv5518716,essv5594683,essv6553343,essv5559069,essv5973645,essv5596504,essv5901085,essv5602057,essv6204433,essv5517797,essv5496511,essv6531799,essv6502810,essv6241074,essv6539319,essv6244536,essv5944582,essv6177899,essv5583578,essv6349629,essv6498297 M 1151 0 314 "" HG00111,HG00115,HG00136,HG00143,HG00152,HG00158,HG00190,HG00236,HG00246,HG00250,HG00253,HG00258,HG00269,HG00275,HG00313,HG00315,HG00318,HG00328,HG00335,HG00338,HG00346,HG00353,HG00373,HG00403,HG00404,HG00418,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00556,HG00557,HG00559,HG00560,HG00566,HG00577,HG00578,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00595,HG00596,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00620,HG00625,HG00626,HG00628,HG00629,HG00634,HG00635,HG00650,HG00651,HG00653,HG00662,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00704,HG00707,HG00708,HG00740,HG01047,HG01048,HG01055,HG01066,HG01069,HG01070,HG01079,HG01083,HG01124,HG01125,HG01136,HG01171,HG01174,HG01187,HG01204,HG01250,HG01251,HG01351,HG01354,HG01356,HG01357,HG01359,HG01440,HG01456,HG01462,HG01488,HG01489,HG01491,HG01492,HG01494,HG01550,NA07048,NA07056,NA07346,NA11843,NA11894,NA11918,NA12155,NA12249,NA12283,NA12286,NA12413,NA12718,NA12828,NA12829,NA12889,NA18526,NA18530,NA18534,NA18536,NA18537,NA18538,NA18539,NA18541,NA18543,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18553,NA18555,NA18558,NA18559,NA18560,NA18566,NA18571,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18608,NA18609,NA18611,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18621,NA18623,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18638,NA18940,NA18941,NA18942,NA18943,NA18944,NA18947,NA18949,NA18950,NA18951,NA18953,NA18959,NA18960,NA18961,NA18963,NA18964,NA18965,NA18967,NA18968,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18981,NA18982,NA18983,NA18984,NA18985,NA18986,NA18987,NA18989,NA18990,NA18999,NA19000,NA19004,NA19005,NA19009,NA19010,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19060,NA19063,NA19064,NA19065,NA19066,NA19067,NA19070,NA19072,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19082,NA19083,NA19084,NA19085,NA19087,NA19088,NA19652,NA19655,NA19657,NA19658,NA19663,NA19664,NA19676,NA19679,NA19681,NA19682,NA19684,NA19719,NA19722,NA19728,NA19749,NA19755,NA19759,NA19770,NA19773,NA19776,NA19780,NA19785,NA19789,NA19900,NA20299,NA20317,NA20518,NA20529,NA20585,NA20770,NA20786,NA20792,NA20795,NA20796,NA20798,NA20800,NA20807,NA20809,NA20818 nsv455661 1 1217251 1275912 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv533179 M 1557 0 1 "" 1782681247_A nsv544964 1 1217251 1275912 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172577 M 17421 0 1 "" 1782681247_A nsv544965 1 1217251 1306704 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708526 M 17421 0 1 "" nsv159887 1 1217713 1222580 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178465 M 24 "" nsv821698 1 1228970 1234390 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433403 M 31 1 0 "" NA18526 esv33767 1 1232736 1233696 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv92753,essv95205,essv96403 M 51 0 3 "" 21721,21944,22371 esv5277 1 1247818 1248481 CNV loss Wang_et_al_2008 18987735 Sequencing essv27718 M 1 0 1 "" YH esv2668719 1 1248029 1248365 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6595273,essv5418766,essv6574790,essv5492979,essv6585409,essv5585922,essv6588959,essv5677508,essv6581210,essv6121162,essv6583372,essv6414921,essv6527997,essv5940370,essv5560832,essv6313643,essv6139409,essv6260648,essv5712419,essv5999528,essv6086244,essv6493791,essv5763188,essv6293240,essv5748541,essv6196338,essv6477402,essv6433471,essv5717657,essv5770629,essv5689300,essv6307777,essv6346924,essv6407286,essv5720768,essv6419526,essv6240718,essv5749614,essv6509430,essv6348798,essv6327485,essv6342496,essv5669228,essv5640761,essv5650707,essv6422432,essv5605806,essv5916807,essv6211939,essv6510773,essv5507509,essv6131316,essv5581180,essv6355570,essv6331138,essv5668182,essv6153278,essv6179947,essv5434280,essv5861847,essv6063511,essv5601093,essv5885116,essv6201177,essv5465241,essv5892946,essv6519482,essv6468715,essv5954327,essv6151367,essv6230316,essv6185697,essv6261554,essv6391109,essv6427194,essv5910444,essv5398259,essv6339447,essv5549681,essv6133384,essv6329865,essv6266824,essv6503217,essv5848923,essv6455939,essv6105175,essv6117765,essv5983254,essv6063925,essv6161479,essv6010561 M 1151 0 91 "" HG00103,HG00237,HG00260,HG00318,HG00334,HG00337,HG00345,HG00418,HG00421,HG00500,HG00531,HG00534,HG00536,HG00580,HG00584,HG00613,HG00614,HG00620,HG00651,HG00654,HG00656,HG00683,HG00692,HG00698,HG00699,HG00702,HG00704,HG00707,HG00708,HG01072,HG01334,HG01350,NA07357,NA12827,NA18489,NA18498,NA18499,NA18505,NA18530,NA18532,NA18534,NA18536,NA18542,NA18546,NA18549,NA18557,NA18561,NA18562,NA18563,NA18564,NA18566,NA18567,NA18572,NA18592,NA18593,NA18599,NA18605,NA18608,NA18610,NA18612,NA18613,NA18624,NA18635,NA18637,NA18923,NA18940,NA18953,NA18960,NA18977,NA19007,NA19102,NA19197,NA19327,NA19355,NA19359,NA19360,NA19371,NA19383,NA19391,NA19396,NA19397,NA19401,NA19463,NA19625,NA19704,NA19712,NA19786,NA20126,NA20289,NA20758,NA20796 esv3337442 1 1248809 1249707 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691758 M 185 1 0 "" NA19240 esv1750792 1 1248993 1249257 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3720664 M 2 0 1 "" HuRef nsv817616 1 1257135 1306704 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417737 M 112 0 1 "" NA19003 esv2758912 1 1263940 1384492 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757716 M 270 0 1 "" NA18991 esv3408806 1 1284051 1284441 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652039 M 185 1 0 "" NA19240 esv25372 1 1288179 1290314 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20786 M 40 2 14 "" NA12004,NA12006,NA12044,NA12287,NA12414,NA12878,NA15510,NA18505,NA18508,NA18511,NA18907,NA18909,NA18916,NA19099,NA19129,NA19257 esv2106414 1 1288188 1290369 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4728356 M 1 0 1 "" NA18507 nsv499366 1 1288200 1290253 CNV gain Kidd_et_al_2010b 21111241 Sequencing nssv585600 M 9 1 0 "" dgv1e199 1 1288201 1290208 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2668981,esv2677875 M 1151 0 33 "" HG00136,HG00442,HG00501,HG00543,HG00581,HG00613,HG01055,HG01060,HG01079,HG01198,HG01342,NA11994,NA18523,NA18632,NA18853,NA18870,NA19056,NA19088,NA19213,NA19257,NA19346,NA19398,NA19439,NA19448,NA19451,NA19452,NA19462,NA19625,NA19722,NA19834,NA20332,NA20542,NA20586 nsv544966 1 1288241 1290179 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708527 M 17421 1 0 "" esv1004967 1 1288264 1290229 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586753 M 3 1 0 "" HuRef nsv511671 1 1288478 1290241 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626308 M 1 0 1 "" 1 esv1653789 1 1288567 1288849 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3908676 M 2 0 1 "" HuRef esv1027332 1 1288893 1289936 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4148647 M 2 0 1 "" HuRef esv1323061 1 1290026 1290026 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3960677 M 2 1 0 "" HuRef dgv25n54 1 1290683 1306366 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544967,nsv544970,nsv544968 M 17421 0 3 "" nsv544969 1 1290683 1374597 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708530 M 17421 0 1 "" nsv160950 1 1293732 1293732 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179528 M 24 "" nsv544971 1 1294063 1351426 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708532 M 17421 0 1 "" esv3050 1 1297068 1297844 CNV loss Wang_et_al_2008 18987735 Sequencing essv25491 M 1 0 1 "" YH esv3366182 1 1315609 1315907 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691772 M 185 1 0 "" NA19238 nsv476469 1 1317396 1317396 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019423 M 9 1 0 "" NA12878 nsv544972 1 1321172 1337736 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708533 M 17421 0 1 "" dgv26n54 1 1321172 1351426 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544973,nsv544974,nsv544976,nsv544975 M 17421 0 4 "" nsv544977 1 1334606 1351747 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708538,nssv708539 M 17421 1 1 "" dgv27n54 1 1337736 1353443 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544979,nsv544978 M 17421 3 0 "" dgv28n54 1 1340697 1360023 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544981,nsv544980 M 17421 2 0 "" dgv29n54 1 1341030 1351747 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544982,nsv544989,nsv544988,nsv544987,nsv544990,nsv544983 M 17421 0 8 "" dgv30n54 1 1341030 1353443 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544984,nsv544986,nsv544985 M 17421 6 0 "" nsv544991 1 1342153 1360773 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708559 M 17421 0 1 "" nsv511672 1 1349800 1351490 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626309 M 1 0 1 "" 1 esv23965 1 1350020 1351520 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv19242 M 40 16 0 "" NA06985,NA12239,NA12414,NA15510,NA18502,NA18505,NA18508,NA18517,NA18858,NA18861,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129 esv988609 1 1350020 1351520 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586390 M 3 0 1 "" HuRef dgv31n54 1 1350050 1351067 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544993,nsv544992 M 17421 0 2 "" dgv32n54 1 1350050 1351747 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544995,nsv544994 M 17421 10 5 "" nsv544996 1 1350050 1353443 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708577,nssv708578,nssv708579,nssv708580 M 17421 4 0 "" nsv544997 1 1350573 1351367 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708581 M 17421 0 1 "" dgv33n54 1 1350629 1354381 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv544998,nsv544999 M 17421 0 2 "" esv9582 1 1366713 1367713 CNV loss Ahn_et_al_2009 19470904 Sequencing essv32023 M 1 0 0 "" esv3820 1 1366998 1367445 CNV loss Wang_et_al_2008 18987735 Sequencing essv26261 M 1 0 1 "" YH esv2540358 1 1381917 1382618 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5193104 M 1 1 0 "" NA18507 esv2758913 1 1389149 2092899 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756832,esv2757717 M 270 6 16 "" NA07056,NA10839,NA12003,NA12006,NA12144,NA12248,NA12740,NA12750,NA12762,NA18504,NA18523,NA18537,NA18632,NA18635,NA18854,NA18940,NA18976,NA18994,NA19144,NA19204,NA19205 nsv545000 1 1421170 1573654 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708584 M 17421 0 1 "" esv24333 1 1427050 1428156 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10423 M 40 1 0 "" NA06985 esv3389517 1 1427298 1428279 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652040 M 185 1 0 "" NA19240 nsv545001 1 1440767 1496418 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708585 M 17421 0 1 "" nsv482135 1 1449689 1470158 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558496 M 1 1 0 "" KB1 dgv34n54 1 1449831 1504314 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545007,nsv545006,nsv545002,nsv545005,nsv545004,nsv545003,nsv545009,nsv545008 M 17421 0 10 "" nsv945742 1 1449940 1463300 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1749478,nssv1750464,nssv1750480,nssv1750444,nssv1749474,nssv1750443,nssv1749484,nssv1750448,nssv1750490,nssv1750416,nssv1749480,nssv1750420,nssv1749481,nssv1750425,nssv1750413,nssv1750441,nssv1749473,nssv1750446,nssv1749476,nssv1750501,nssv1750483,nssv1750421,nssv1750482,nssv1750456,nssv1749477,nssv1750492,nssv1750486,nssv1750476,nssv1750415,nssv1750495,nssv1749482,nssv1750453,nssv1749479,nssv1750488,nssv1750487,nssv1750466,nssv1750489,nssv1750442,nssv1749486,nssv1750465,nssv1749485,nssv1750468,nssv1749471,nssv1750454,nssv1750479,nssv1750469,nssv1750414,nssv1750419,nssv1749475,nssv1750499,nssv1749487,nssv1750431,nssv1750412,nssv1750500,nssv1750481,nssv1750467,nssv1750450,nssv1750433,nssv1750427,nssv1750478,nssv1750497,nssv1750498,nssv1750417,nssv1750470,nssv1750445,nssv1750493,nssv1750471,nssv1750447,nssv1750449,nssv1750437,nssv1750491,nssv1750430,nssv1750474,nssv1750457,nssv1750426,nssv1750459,nssv1750438,nssv1750428,nssv1750472,nssv1750477,nssv1750435,nssv1750423,nssv1750424,nssv1750461,nssv1750422,nssv1750434,nssv1750436,nssv1750475,nssv1750452,nssv1750439,nssv1750432,nssv1750458,nssv1749470,nssv1750494,nssv1750460,nssv1750463,nssv1750455 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2662001 1 1464942 1473570 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5912105 M 1151 0 1 "" NA19722 nsv482146 1 1471784 1496201 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558507 M 1 1 0 "" KB1 nsv945743 1 1476207 1490889 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750520,nssv1750534,nssv1750505,nssv1750530,nssv1750588,nssv1750531,nssv1750512,nssv1750582,nssv1750511,nssv1750544,nssv1750521,nssv1750566,nssv1750593,nssv1750578,nssv1750519,nssv1750555,nssv1750591,nssv1750556,nssv1750503,nssv1750581,nssv1750523,nssv1750559,nssv1750592,nssv1750565,nssv1750508,nssv1750605,nssv1750510,nssv1750539,nssv1750597,nssv1750563,nssv1750509,nssv1750547,nssv1750504,nssv1750572,nssv1750514,nssv1750571,nssv1750516,nssv1750533,nssv1750522,nssv1750583,nssv1750587,nssv1750564,nssv1750598,nssv1750552,nssv1750517,nssv1750528,nssv1750513,nssv1750606,nssv1750506,nssv1750557,nssv1750515,nssv1750549,nssv1750589,nssv1750560,nssv1750590,nssv1750577,nssv1750502,nssv1750602,nssv1750541,nssv1750603,nssv1750535,nssv1750576,nssv1750538,nssv1750558,nssv1750575,nssv1750524,nssv1750561,nssv1750570,nssv1750594,nssv1750548,nssv1750567,nssv1750585,nssv1750609,nssv1750579,nssv1750526,nssv1750537,nssv1750545,nssv1750574,nssv1750600,nssv1750553,nssv1750569,nssv1750527,nssv1750586,nssv1750599,nssv1750550,nssv1750542,nssv1750532,nssv1750543,nssv1750525,nssv1750601,nssv1750580,nssv1750604,nssv1750546,nssv1750608,nssv1750554,nssv1750568,nssv1750536 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv1254392 1 1477969 1477969 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3989689 M 2 1 0 "" HuRef esv2661503 1 1478865 1481412 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6347901,essv6214666,essv6270841,essv5714896,essv6587240,essv6132856,essv6275133,essv5843579,essv6564232,essv6060091,essv6367328,essv5843575,essv6372532,essv5846416,essv6428187,essv6007146,essv6369700,essv5975062,essv6315584,essv6158256,essv6250432,essv5508008,essv5863834,essv5978113,essv5673238,essv6064386,essv5583587,essv5562046,essv5587762 M 1151 0 29 "" NA19652,NA19655,NA19660,NA19661,NA19663,NA19676,NA19682,NA19685,NA19716,NA19717,NA19722,NA19723,NA19725,NA19726,NA19731,NA19732,NA19746,NA19747,NA19750,NA19755,NA19756,NA19758,NA19759,NA19771,NA19776,NA19785,NA19786,NA19788,NA19789 esv25832 1 1479529 1480815 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11756 M 40 0 3 "" NA18511,NA18523,NA18861 nsv545010 1 1479719 1518541 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708596 M 17421 0 1 "" nsv945744 1 1496988 1530206 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750616,nssv1750633,nssv1750627,nssv1750643,nssv1750701,nssv1750689,nssv1750696,nssv1750649,nssv1750623,nssv1750635,nssv1750620,nssv1750659,nssv1750628,nssv1750688,nssv1750704,nssv1750715,nssv1750630,nssv1750669,nssv1750612,nssv1750691,nssv1750699,nssv1750660,nssv1750621,nssv1750645,nssv1750611,nssv1750678,nssv1750615,nssv1750634,nssv1750631,nssv1750702,nssv1750619,nssv1750637,nssv1750700,nssv1750644,nssv1750703,nssv1750654,nssv1750617,nssv1750674,nssv1750624,nssv1750686,nssv1750694,nssv1750661,nssv1750625,nssv1750680,nssv1750614,nssv1750665,nssv1750613,nssv1750679,nssv1750626,nssv1750663,nssv1750698,nssv1750653,nssv1750622,nssv1750705,nssv1750697,nssv1750681,nssv1750672,nssv1750655,nssv1750610,nssv1750676,nssv1750636,nssv1750693,nssv1750692,nssv1750647,nssv1750712,nssv1750711,nssv1750667,nssv1750641,nssv1750642,nssv1750646,nssv1750714,nssv1750675,nssv1750638,nssv1750687,nssv1750657,nssv1750668,nssv1750670,nssv1750639,nssv1750652,nssv1750710,nssv1750690,nssv1750656,nssv1750650,nssv1750666,nssv1750632,nssv1750716,nssv1750683,nssv1750682,nssv1750677,nssv1750713,nssv1750671,nssv1750685,nssv1750709,nssv1750708,nssv1750658,nssv1750664,nssv1750648 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2659109 1 1508183 1510384 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6343375,essv6135295,essv6564617,essv6107643,essv6474698,essv5950686,essv6427354,essv5885089,essv6274829,essv5685136,essv6588406,essv5716610,essv6161076,essv6148352,essv5405437,essv5627421,essv6056791,essv5626254,essv5913103,essv6068180,essv5958348 M 1151 0 21 "" HG01075,HG01082,HG01108,HG01140,NA19130,NA19313,NA19315,NA19317,NA19371,NA19374,NA19376,NA19381,NA19384,NA19390,NA19395,NA19429,NA19444,NA19446,NA19449,NA19467,NA19701 nsv821809 1 1508588 1512139 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1428013 M 31 1 0 "" AK10 nsv821920 1 1508588 1528446 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440791 M 31 1 0 "" NA18969 nsv482157 1 1512175 1534684 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558518 M 1 1 0 "" KB1 esv2658581 1 1530531 1530850 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6518177,essv6079796,essv6154276,essv5714389,essv6181341,essv5940742,essv6337906,essv5834945,essv6318757,essv5553146,essv6239221,essv5993762,essv6194183,essv5799072,essv6391818,essv5722394,essv6539627,essv5520380,essv6266096,essv5745074,essv6234765,essv5773997,essv6425592,essv5939453,essv6469707,essv5825216,essv6367525,essv5588497,essv6225800,essv5954013,essv6185820,essv5694863,essv6435646,essv5441861,essv6581596,essv5678946,essv6228720,essv5396313,essv6172914,essv5974677,essv6361569,essv5813001,essv6241924,essv6042587,essv6523508,essv6130279,essv6244691,essv6133414,essv6178089,essv5738072,essv6479552,essv5723921,essv6199770,essv5807425,essv6343716,essv5675590,essv6397483,essv5978467,essv6471708,essv5690141,essv6204344,essv5671787,essv6445387,essv5821996,essv6279719,essv5712435,essv6226627,essv5531638,essv6553516,essv5692049,essv6518871,essv5641125,essv6191601,essv5723953,essv6577184,essv5481540,essv6432023,essv5484376,essv6432025,essv5404027,essv6554091,essv5937129,essv6419027,essv5800780,essv6186717,essv5801413,essv6142004,essv6011613,essv6395439,essv5820972,essv6399190,essv5969045,essv6247281,essv5677732,essv6140657,essv5700240,essv6197313,essv5672669,essv6469356,essv6134604,essv6452456,essv5747726,essv6396485,essv5631905,essv6290555,essv5650442,essv6175357,essv5959211,essv6281476,essv5712611,essv6279475,essv5631465,essv6404248,essv5688132,essv6231944,essv5762497,essv6287869,essv5794862,essv6596805,essv5599977,essv6324178,essv5698039,essv6464835,essv6040829,essv6488077,essv6131969,essv6425893,essv6122795,essv6465710,essv6058176,essv6212988,essv5931672,essv6211568,essv5891209,essv6273412,essv5578213,essv6513074,essv5488378,essv6191951,essv5701080,essv6482893,essv5766335,essv6175237,essv5707419,essv6586974,essv5998119,essv6317076,essv5732240,essv6224876,essv5749533,essv6307412,essv5702197,essv6494184,essv5630193,essv6302686,essv5554792,essv6510252,essv5831383,essv6450209,essv5676860,essv6443605,essv6078561,essv6317091,essv5922774,essv6344023,essv5816004,essv6531665,essv5997694,essv6474611,essv5679637,essv6265122,essv6059203,essv6186597,essv5786024,essv6214095,essv5683825,essv6279148,essv5650338,essv6519435,essv5806292,essv6221054,essv5623987,essv6457568,essv5813678,essv6211165,essv5965280,essv6416002,essv5787953,essv6479147,essv5616806,essv6154431,essv5866453,essv6247479,essv5403407,essv6430631,essv6063579,essv6339707,essv6093191,essv6367867,essv5812123,essv6161424,essv5724642,essv6589722,essv5972124,essv6246072,essv5528890,essv6286765,essv5991070,essv6391429,essv5557211,essv6258489,essv5598870,essv6357829,essv5979075,essv6240991,essv5476828,essv6410581,essv5492724,essv6585173,essv5580450,essv6598371,essv5855205,essv6205353,essv5456443,essv6347709,essv5453253,essv6520422,essv6053094,essv6287490,essv5670867,essv6500668,essv5951084,essv6199429,essv5609173,essv6146300,essv5643959,essv6497970,essv5633943,essv6548233,essv6027434,essv6326756,essv5994443,essv6300044,essv5541808,essv6156669,essv5851382,essv6197366,essv5883171,essv5920966,essv5527698,essv6005572,essv5489541,essv5501254,essv5451411,essv5673467,essv5527150,essv6035940,essv6072390,essv5456023,essv5551173,essv5959060,essv5553769,essv5628085,essv5482099,essv5780437,essv5991250,essv5871753,essv5803216,essv5416971,essv5497478,essv5939784,essv5640187,essv5812650,essv5614655,essv6066088,essv5555363,essv5923966,essv5597132,essv5870848,essv6042582,essv5965350,essv5932490,essv6032109,essv5522114,essv5901561,essv6108372,essv5609533,essv5858092,essv6129291,essv5641262,essv6086549,essv5959326,essv5868543,essv6012078,essv5507419,essv5568689,essv5612794,essv5855505,essv5989514,essv5886508,essv5990101,essv5471316,essv5484338,essv5418392,essv5648702,essv5415672,essv6113627,essv5965335,essv5993427,essv5884375,essv5597594,essv5463872,essv5628239,essv6072748,essv5414131,essv5493577,essv5951132,essv6069039,essv5963869,essv5442733,essv5413690,essv6028335,essv5985570,essv5899920,essv5458146,essv5480416,essv5928241,essv6103904,essv6117756,essv5439542,essv5878788,essv5882887,essv6086199,essv5604347,essv5594774,essv6044419,essv5885037,essv5601026,essv5457645,essv6011467,essv5482830,essv5635976,essv5401002,essv5538350,essv5451520 M 1151 0 345 "" HG00114,HG00187,HG00239,HG00250,HG00259,HG00268,HG00281,HG00313,HG00318,HG00323,HG00329,HG00346,HG00353,HG00361,HG00375,HG00418,HG00419,HG00422,HG00437,HG00448,HG00472,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00537,HG00542,HG00543,HG00556,HG00560,HG00577,HG00578,HG00581,HG00584,HG00589,HG00590,HG00595,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00625,HG00628,HG00629,HG00635,HG00650,HG00653,HG00656,HG00657,HG00671,HG00672,HG00684,HG00689,HG00690,HG00698,HG00701,HG00702,HG00705,HG00707,HG00708,HG00740,HG01055,HG01060,HG01066,HG01067,HG01069,HG01073,HG01075,HG01079,HG01082,HG01102,HG01108,HG01125,HG01140,HG01170,HG01171,HG01342,HG01378,HG01462,HG01488,HG01492,NA07051,NA12716,NA18486,NA18489,NA18498,NA18499,NA18501,NA18502,NA18504,NA18505,NA18507,NA18508,NA18510,NA18511,NA18517,NA18519,NA18520,NA18522,NA18523,NA18534,NA18536,NA18538,NA18542,NA18545,NA18548,NA18549,NA18550,NA18555,NA18559,NA18560,NA18561,NA18562,NA18563,NA18570,NA18571,NA18573,NA18576,NA18577,NA18592,NA18595,NA18599,NA18606,NA18608,NA18610,NA18612,NA18615,NA18616,NA18623,NA18632,NA18633,NA18636,NA18638,NA18853,NA18856,NA18858,NA18861,NA18867,NA18868,NA18870,NA18871,NA18873,NA18874,NA18907,NA18908,NA18909,NA18912,NA18916,NA18917,NA18923,NA18924,NA18934,NA18940,NA18941,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18950,NA18951,NA18952,NA18953,NA18956,NA18959,NA18961,NA18963,NA18964,NA18965,NA18968,NA18972,NA18973,NA18974,NA18975,NA18976,NA18980,NA18981,NA18982,NA18983,NA18984,NA18988,NA18989,NA18999,NA19000,NA19002,NA19003,NA19005,NA19009,NA19010,NA19054,NA19057,NA19058,NA19060,NA19062,NA19064,NA19065,NA19066,NA19068,NA19070,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19083,NA19085,NA19087,NA19088,NA19093,NA19098,NA19099,NA19102,NA19108,NA19114,NA19116,NA19119,NA19129,NA19130,NA19131,NA19137,NA19138,NA19144,NA19147,NA19153,NA19160,NA19171,NA19172,NA19189,NA19190,NA19197,NA19198,NA19200,NA19204,NA19207,NA19209,NA19213,NA19223,NA19225,NA19235,NA19236,NA19238,NA19239,NA19247,NA19257,NA19311,NA19312,NA19313,NA19328,NA19332,NA19346,NA19350,NA19355,NA19360,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19399,NA19401,NA19404,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19437,NA19438,NA19440,NA19443,NA19445,NA19448,NA19449,NA19451,NA19452,NA19455,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19469,NA19470,NA19471,NA19472,NA19625,NA19663,NA19676,NA19682,NA19700,NA19701,NA19704,NA19711,NA19712,NA19720,NA19818,NA19819,NA19901,NA19916,NA19920,NA19921,NA20127,NA20276,NA20289,NA20294,NA20299,NA20341,NA20348,NA20815 esv3418946 1 1537609 1538607 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691939 M 185 1 0 "" NA19239 esv1301718 1 1543727 1543727 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3821253 M 2 1 0 "" HuRef esv2675022 1 1560197 1560477 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5557225 M 1151 0 1 "" NA18973 nsv472762 1 1561225 1561225 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015897 M 9 1 0 "" NA18555 esv2760410 1 1565561 1756248 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7028523,essv7029301,essv7010743,essv7017410,essv7025188,essv7030412,essv7009632,essv7029856,essv7030634,essv7030190,essv7026299,essv7012966,essv7024077,essv7028968,essv7029412,essv7022965,essv7018521,essv7030301,essv7015188,essv7027079,essv7029745,essv7019632,essv7027190,essv7028745,essv7029967,essv7027301,essv7027412,essv7028856,essv7027523,essv7027634,essv7029079,essv7027745,essv7030079,essv7014077,essv7027857,essv7030523,essv7027968,essv7029190,essv7029634,essv7028079,essv7029523,essv7028190,essv7028301,essv7028634,essv7011854,essv7021854,essv7028412,essv7020743,essv7016299 M 1109 8 41 "" SW_0020,SW_0058,SW_0060,SW_0061,SW_0062,SW_0072,SW_0086,SW_0119,SW_0120,SW_0144,SW_0187,SW_0198,SW_0200,SW_0589,SW_0639,SW_0648,SW_0760,SW_0773,SW_0789,SW_0805,SW_0818,SW_0831,SW_0856,SW_1083,SW_1086,SW_1103,SW_1120,SW_1139,SW_1147,SW_1149,SW_1156,SW_1189,SW_1243,SW_1262,SW_1289,SW_1302,SW_1335,SW_1366,SW_1372,SW_1396,SW_1404,SW_1414,SW_1428,SW_1436,SW_1448,SW_1455,SW_1459,SW_1483,SW_1485 esv1010850 1 1565629 1565629 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572228 M 3 1 0 "" HuRef esv2677356 1 1587494 1589290 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5934228,essv6564666,essv6471016,essv6133147,essv5993482,essv6444599 M 1151 0 6 "" NA18871,NA19338,NA19382,NA19428,NA19457,NA19834 esv998174 1 1605470 1606590 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586347 M 3 1 0 "" HuRef esv23829 1 1605550 1606590 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15071 M 40 0 3 "" NA12006,NA12878,NA18916 esv2664117 1 1605567 1606220 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6453826,essv5918885,essv6407996,essv6316405,essv6574638,essv5792790,essv6488100,essv6301888,essv6532687,essv5691331,essv5565288,essv5766633,essv6139546,essv5826421,essv6205041,essv5732358,essv5732359,essv6215815,essv5828149,essv6246700,essv6200524,essv5717982,essv5624349,essv6261630,essv5527257,essv5872095,essv5464342,essv6301960,essv5622631,essv5984908,essv6084310,essv6205705,essv5923859,essv5415315,essv5966263,essv5671411,essv5979406,essv5661906,essv6282969,essv5530409,essv5931089,essv5409593,essv5517798,essv5449664,essv5401529,essv5526959,essv5451145,essv6285256,essv5842142,essv6255187,essv5498105,essv5998151,essv6222802 M 1151 0 53 "" HG00100,HG00118,HG00131,HG00160,HG00187,HG00232,HG00251,HG00268,HG00269,HG00310,HG00312,HG00320,HG00329,HG00344,HG00372,HG00436,HG00613,HG00640,HG00734,HG00737,HG01069,HG01070,HG01073,HG01095,HG01101,HG01107,HG01125,HG01133,HG01365,HG01390,HG01441,HG01515,HG01521,NA11829,NA11830,NA11930,NA11933,NA12043,NA12347,NA12748,NA18519,NA18593,NA18637,NA18987,NA19434,NA19443,NA20340,NA20344,NA20516,NA20530,NA20539,NA20769,NA20800 dgv35n54 1 1605577 1606209 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545012,nsv545011 M 17421 2 0 "" dgv36n54 1 1605577 1606492 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545013,nsv545014,nsv545016,nsv545015 M 17421 5 0 "" nsv545017 1 1615322 1663759 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708604 M 17421 0 1 "" nsv822031 1 1617252 1617956 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434858 M 31 0 1 "" NA18942 esv2661270 1 1625365 1636030 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6569672,essv5975210,essv6261109,essv6217076,essv6488862,essv5712261,essv6328148,essv5625476,essv6571513,essv6021583,essv6548334,essv6141404,essv6505176,essv6113138,essv6414757,essv5786512,essv6312198,essv5949761,essv6260213,essv5395845,essv6363404,essv6036632,essv6412490,essv5824569,essv6485645,essv5738802,essv6489635,essv5850341,essv6315048,essv5937538,essv6263804,essv5920723,essv6334615,essv5597414,essv6468817,essv5815876,essv6335638,essv5413048,essv6249390,essv5789412,essv6507928,essv5791495,essv6428230,essv5760634,essv6475633,essv5928230,essv6342848,essv5593315,essv5639379,essv5954824,essv5653363,essv5665738,essv5530709,essv5643096,essv5858849,essv6184775,essv6010091,essv5858500,essv6126898,essv5539470,essv5573107,essv5839359,essv6071888,essv5619505,essv6130761,essv5609560,essv5426813,essv5613721,essv5628348,essv6059373,essv5605080,essv5653921,essv5984077,essv5422893,essv5845328,essv6126633,essv5475531,essv5603865,essv6211219,essv6099313,essv5485712,essv6182156,essv6022491,essv5909524,essv5468288,essv5714079 M 1151 0 86 "" HG00403,HG00404,HG00418,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00556,HG00557,HG00560,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00593,HG00595,HG00596,HG00607,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00620,HG00625,HG00626,HG00628,HG00629,HG00634,HG00635,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708 esv2659399 1 1629265 1633013 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6198417,essv5502383,essv6171576,essv6122711,essv6325181,essv5645061,essv6498815,essv5903313,essv6271528,essv5480951,essv6316185,essv5788822,essv6421253,essv5475895,essv6483495,essv5799184,essv6185128,essv5555449,essv6498962,essv5845711,essv6335420,essv5792798,essv6216510,essv5679080,essv6210050,essv5966500,essv6416354,essv6105270,essv6365130,essv5814571,essv6398734,essv5789042,essv6445395,essv5447705,essv6214922,essv5826361,essv6489895,essv5555203,essv6584669,essv5975899,essv6210581,essv5825844,essv6392787,essv5792913,essv6451693,essv5750344,essv6261648,essv5676911,essv6594060,essv5751221,essv6175240,essv5730259,essv6543940,essv5744271,essv6176711,essv5764969,essv6256437,essv5840257,essv6344659,essv5844422,essv6162221,essv5909662,essv6547669,essv6043598,essv6182143,essv5792291,essv6531938,essv6130371,essv6445131,essv5770643,essv6594591,essv5564875,essv6527817,essv5947235,essv6334883,essv5640105,essv6299341,essv5412961,essv6373554,essv6014074,essv6506220,essv5992909,essv6403318,essv5932031,essv6540194,essv5603576,essv6583165,essv6057704,essv6363277,essv5973783,essv6468550,essv5971515,essv5917107,essv5847408,essv5975812,essv5994453,essv5838204,essv5607117,essv5608365,essv5430682,essv6057050,essv6077960,essv5576454,essv6052102,essv5438654,essv5552407,essv5556717,essv6008653,essv5938443,essv5447867,essv5597251,essv5910205,essv5437332,essv6019147,essv5456241,essv5484770,essv6068528,essv5970937,essv5967186,essv5777807,essv6130105,essv5501015,essv5922663,essv5563905,essv5504308,essv6051974,essv5906768,essv5505835,essv6062074,essv5659326 M 1151 0 130 "" HG00106,HG00108,HG00111,HG00114,HG00116,HG00117,HG00118,HG00119,HG00120,HG00122,HG00123,HG00124,HG00125,HG00126,HG00131,HG00136,HG00137,HG00138,HG00139,HG00140,HG00146,HG00148,HG00149,HG00150,HG00152,HG00154,HG00155,HG00156,HG00157,HG00158,HG00159,HG00160,HG00171,HG00174,HG00176,HG00177,HG00178,HG00180,HG00181,HG00182,HG00183,HG00185,HG00186,HG00187,HG00189,HG00190,HG00231,HG00232,HG00233,HG00236,HG00237,HG00239,HG00242,HG00243,HG00244,HG00245,HG00246,HG00247,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00258,HG00259,HG00260,HG00261,HG00262,HG00263,HG00264,HG00265,HG00266,HG00267,HG00268,HG00269,HG00270,HG00271,HG00272,HG00273,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00309,HG00310,HG00312,HG00313,HG00315,HG00318,HG00319,HG00320,HG00321,HG00323,HG00324,HG00325,HG00326,HG00327,HG00329,HG00330,HG00331,HG00334,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00345,HG00346,HG00353,HG00357,HG00361,HG00366,HG00367,HG00368,HG00372,HG00375,HG00377,HG01334 esv27786 1 1632502 1752267 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17198 M 40 1 0 "" NA12828 nsv545018 1 1638499 1688102 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708605 M 17421 0 1 "" esv3390461 1 1646728 1647126 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691995 M 185 1 0 "" NA12878 dgv2e199 1 1653096 1721890 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2670087,esv2659357 M 1151 0 3 "" HG01354,NA12400,NA18982 esv1336011 1 1653100 1653100 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4160103 M 2 1 0 "" HuRef dgv3n67 1 1653920 1735718 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv822142,nsv822253,nsv822364 M 31 3 0 "" NA18542,NA18566,NA18582 nsv947410 1 1657084 1663827 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764181,nssv2765284,nssv2765500,nssv2758644,nssv2766296,nssv2761730,nssv2763764,nssv2762239,nssv2759096,nssv2760684 M 97 9 0 "" HGDP00456,HGDP00521,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv950516 1 1663141 1715961 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997170 M 1 0 1 "" BILGI_BIOE dgv37n54 1 1663759 1696548 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545023,nsv545019,nsv545024,nsv545025 M 17421 0 4 "" dgv38n54 1 1663759 1713469 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545021,nsv545020 M 17421 3 0 "" nsv545022 1 1665581 1683909 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708610 M 17421 0 1 "" esv2677252 1 1666974 1667141 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6391091,essv6154489,essv6325084,essv5507268,essv6466279,essv5856373,essv6010868,essv6082461,essv6463171,essv6363966,essv6354946,essv6457687,essv6579480,essv5719674,essv5521618,essv6348733,essv6219021,essv5726476,essv6421976,essv5752383,essv5829153,essv5585639,essv5780450,essv6452841,essv5560566,essv6475988,essv5714263,essv5725166,essv5865553,essv5713226,essv6275018,essv6144567,essv6385494,essv6577219,essv6351801,essv5800608,essv5432871,essv5525175,essv5490309,essv6511413,essv6461434,essv6481848,essv5686758,essv5824439,essv5806527,essv6089090,essv6441883,essv5737014,essv5682903,essv5827810,essv6505025,essv6468856,essv5670715,essv5719551,essv6064067,essv5680585,essv5983326,essv6067300,essv5743890,essv6097410,essv6306839,essv5778790,essv6517435,essv5848961,essv5711296,essv5453799,essv6480235,essv5539922,essv5414933,essv6507581,essv5787293,essv5728695,essv6477385,essv6219210,essv5913600,essv5855555,essv6530838,essv6360176,essv5813169,essv6523303,essv5505495,essv6583639,essv6384137,essv6439886,essv5703175,essv5598338,essv5677697,essv5742636,essv5758590,essv6080540,essv6377747,essv6531138,essv6399211,essv5701510,essv5955412,essv5817169,essv5685989,essv6037174,essv6033098,essv6092574,essv6245122,essv6144633,essv5416958,essv5715661,essv6534746,essv6513512,essv5411981,essv6533658,essv6443823,essv5783705,essv5861386,essv5570830,essv5755734,essv5465085,essv5799562,essv5641442,essv5906954,essv5660437,essv6100264,essv6496619,essv6059393,essv6078545,essv5577638,essv6326214,essv5732216,essv5754690,essv6247874,essv6057941,essv6196751,essv5751080,essv5558810,essv6255171,essv6063237,essv6101026,essv6134637,essv5794898,essv6019252,essv5838836,essv5795485,essv5727829,essv5554245,essv6353719,essv5818662,essv6544194,essv5778641,essv6070975,essv5798784,essv6425099,essv6224571,essv5652332,essv6475010,essv6163450,essv6388925,essv5922942,essv6362748,essv5741004,essv5624676,essv6127630,essv6245168,essv5724902,essv6076421,essv6162859,essv5808589,essv5690915,essv5503479,essv6283756,essv5799767,essv6241989,essv5609013,essv6534451,essv5913493,essv5681930,essv5814999,essv6259259,essv5998842,essv5560038,essv6520103,essv6089120,essv5873431,essv5816063,essv5785569,essv5730167,essv6131270,essv5709883,essv5824870,essv5655572,essv6523892,essv6120255,essv6573562,essv5592079,essv5977523,essv5680170,essv5918816,essv5509573,essv6055625,essv5796075,essv5796712,essv5803001,essv6583777,essv5480228,essv5789544,essv5528195,essv5555326,essv5824248,essv5983653,essv5926739,essv6486017,essv6582034,essv5729317,essv6143736,essv5455494,essv6338309,essv5990978,essv6249825,essv5769689,essv6377898,essv6040088,essv6300192,essv5532300,essv5753638,essv6380279,essv5452041,essv6173906,essv6280162,essv5517074,essv5629615,essv5881611,essv6476219,essv6561401,essv6303979,essv6484789,essv6063509,essv5958664,essv6231956,essv5410628,essv6000476,essv6121546,essv6327136,essv6528908,essv6468785,essv5841126,essv5965909,essv5465702,essv5621469,essv5949132,essv6277620,essv5491948,essv5586488,essv5572281,essv6518958,essv5414259,essv5466018,essv6488545,essv6311986,essv5669268,essv5852832,essv5454282,essv6587828,essv6401653,essv5524858,essv6524424,essv5639604,essv5971449,essv5530827,essv5612605,essv5594143,essv6024126,essv6121292,essv5875323,essv5397563,essv6145920,essv6352849,essv6483119,essv6264563,essv6454923,essv6163516,essv6518579,essv6579236,essv6228690,essv6253254,essv6171148,essv6059269,essv6210597,essv6582422,essv5918120,essv6369913,essv6503940,essv5979575,essv5625120,essv5902254,essv6426837,essv6028094,essv6110359,essv5967632,essv5869212,essv5598186,essv5472448,essv5415954,essv6029517,essv6393332,essv5636269,essv6386927,essv6189725,essv6304603,essv6072716,essv6579272,essv6160111,essv5974237,essv5999698,essv5517949,essv5922773,essv6280940,essv6488614,essv5706799,essv6003771,essv5443214,essv5952055,essv5895978,essv6469104,essv6359965,essv6548485,essv5510878,essv5876341,essv5540251,essv5505868,essv5471351,essv6237717,essv6142179,essv5630121,essv5857413,essv5401685,essv5595889,essv6210325,essv6183688,essv5945642,essv6458089,essv5890984,essv6253580,essv5850184,essv5611984,essv5607350,essv5677015,essv6112644,essv6294300,essv5511278,essv6547015,essv6227801,essv6256174,essv5580002,essv5627193,essv5465043,essv5447734,essv5509514,essv6162325,essv6551932,essv6174363,essv6280590,essv5587767,essv5471357,essv5406360,essv6094569,essv6205800,essv5551605,essv6148996,essv5632389,essv6492092,essv5396149,essv5998608,essv5675001,essv6212542,essv5669363,essv5550248,essv6576524,essv5576928,essv5517953,essv6009097,essv6329825,essv5597038,essv5964151,essv6167559,essv6378933,essv5448062,essv5659577,essv6455345,essv5882292,essv6592928,essv6298538,essv6085025,essv6127498,essv6221827,essv5443804,essv5611680,essv5796167,essv6308867,essv5396411,essv6547938,essv5519389,essv6119852,essv5526789,essv6127826,essv5663765,essv6031567,essv6560113,essv6207868,essv6407375,essv6201245,essv6432484,essv6506618,essv6079747,essv5674970,essv5909153,essv6254951,essv6259863,essv6357595,essv5472324,essv5435077,essv5637380,essv6235955,essv6096703,essv5995956,essv5908627,essv6049037,essv5931039,essv6506144,essv6063495,essv5842247,essv5459712,essv6466973,essv6374888,essv6045526,essv6126272,essv5779054,essv5457314,essv6195379,essv6111969,essv5512851,essv5664321,essv5495344,essv6402388,essv5999000,essv5974341,essv6044604,essv5994378,essv5423424,essv5671807,essv5971409,essv5448907,essv5570846 M 1151 0 448 "" HG00096,HG00098,HG00100,HG00103,HG00106,HG00108,HG00111,HG00112,HG00114,HG00115,HG00116,HG00117,HG00118,HG00119,HG00120,HG00123,HG00124,HG00125,HG00126,HG00127,HG00131,HG00133,HG00136,HG00137,HG00138,HG00139,HG00140,HG00141,HG00142,HG00143,HG00144,HG00146,HG00148,HG00149,HG00150,HG00151,HG00152,HG00154,HG00155,HG00156,HG00157,HG00158,HG00159,HG00160,HG00171,HG00173,HG00174,HG00176,HG00177,HG00178,HG00179,HG00180,HG00181,HG00182,HG00185,HG00186,HG00187,HG00188,HG00189,HG00190,HG00232,HG00233,HG00236,HG00237,HG00239,HG00242,HG00243,HG00244,HG00245,HG00246,HG00247,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00258,HG00259,HG00260,HG00261,HG00262,HG00263,HG00264,HG00265,HG00266,HG00267,HG00268,HG00269,HG00270,HG00271,HG00272,HG00273,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00306,HG00308,HG00309,HG00310,HG00312,HG00313,HG00315,HG00318,HG00319,HG00320,HG00321,HG00323,HG00324,HG00325,HG00326,HG00327,HG00328,HG00329,HG00330,HG00331,HG00334,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00345,HG00346,HG00353,HG00357,HG00361,HG00366,HG00367,HG00368,HG00369,HG00372,HG00373,HG00375,HG00377,HG00418,HG00419,HG00422,HG00428,HG00436,HG00437,HG00442,HG00443,HG00449,HG00463,HG00472,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00531,HG00536,HG00537,HG00542,HG00543,HG00553,HG00554,HG00581,HG00583,HG00584,HG00590,HG00607,HG00608,HG00613,HG00614,HG00619,HG00620,HG00640,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00684,HG00689,HG00692,HG00693,HG00699,HG00704,HG00705,HG00707,HG00708,HG00736,HG00740,HG01052,HG01055,HG01060,HG01066,HG01067,HG01069,HG01070,HG01072,HG01073,HG01079,HG01080,HG01082,HG01095,HG01101,HG01102,HG01107,HG01108,HG01124,HG01125,HG01134,HG01136,HG01137,HG01140,HG01148,HG01170,HG01171,HG01173,HG01174,HG01187,HG01188,HG01250,HG01251,HG01253,HG01334,HG01350,HG01351,HG01353,HG01356,HG01360,HG01365,HG01366,HG01374,HG01375,HG01377,HG01383,HG01384,HG01389,HG01390,HG01455,HG01456,HG01462,HG01492,HG01515,NA07347,NA12154,NA12275,NA12342,NA12761,NA18499,NA18519,NA18520,NA18530,NA18534,NA18536,NA18542,NA18543,NA18544,NA18548,NA18549,NA18557,NA18559,NA18577,NA18582,NA18593,NA18595,NA18596,NA18597,NA18602,NA18606,NA18610,NA18613,NA18616,NA18617,NA18619,NA18622,NA18623,NA18632,NA18635,NA18636,NA18637,NA18933,NA18934,NA18963,NA18977,NA19000,NA19009,NA19072,NA19074,NA19082,NA19083,NA19084,NA19087,NA19223,NA19311,NA19312,NA19313,NA19315,NA19316,NA19317,NA19318,NA19319,NA19321,NA19327,NA19328,NA19331,NA19332,NA19334,NA19338,NA19346,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19399,NA19403,NA19404,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19453,NA19455,NA19456,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19469,NA19470,NA19471,NA19472,NA19473,NA19474,NA19625,NA19700,NA19701,NA19703,NA19704,NA19707,NA19711,NA19712,NA19717,NA19749,NA19756,NA19759,NA19770,NA19774,NA19783,NA19818,NA19819,NA19834,NA19835,NA19900,NA19901,NA19904,NA19908,NA19909,NA19914,NA19916,NA19917,NA19920,NA19921,NA19982,NA19985,NA20126,NA20127,NA20276,NA20278,NA20281,NA20282,NA20287,NA20289,NA20291,NA20294,NA20296,NA20314,NA20317,NA20322,NA20332,NA20334,NA20336,NA20340,NA20341,NA20342,NA20344,NA20346,NA20348,NA20356,NA20506,NA20586,NA20819 esv1758309 1 1666992 1667159 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3827771 M 2 0 1 "" HuRef nsv545026 1 1671348 1706566 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708614 M 17421 0 1 "" nsv945745 1 1671930 1674224 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750719,nssv1751695,nssv1751647,nssv1751725,nssv1751657,nssv1751717,nssv1751644,nssv1751707,nssv1751658,nssv1749122,nssv1751729,nssv1751709,nssv1751651,nssv1751715,nssv1751655,nssv1751722,nssv1751727,nssv1751704,nssv1751650,nssv1751684,nssv1749109,nssv1749123,nssv1751661,nssv1751683,nssv1749112,nssv1751673,nssv1751654,nssv1751718,nssv1751648,nssv1751678,nssv1751731,nssv1749116,nssv1751660,nssv1751714,nssv1751652,nssv1751672,nssv1751649,nssv1749119,nssv1751662,nssv1751669,nssv1749110,nssv1751721,nssv1751656,nssv1749118,nssv1751728,nssv1751670,nssv1751645,nssv1751701,nssv1751659,nssv1751702,nssv1751646,nssv1751696,nssv1749113,nssv1749120,nssv1751726,nssv1751699,nssv1751674,nssv1751690,nssv1751681,nssv1751700,nssv1749111,nssv1749114,nssv1751712,nssv1751703,nssv1751691,nssv1751666,nssv1751687,nssv1751689,nssv1751723,nssv1749121,nssv1751711,nssv1751698,nssv1751724,nssv1751716,nssv1749117,nssv1750717,nssv1751693,nssv1751705,nssv1751668,nssv1749115,nssv1751706,nssv1751680,nssv1751665,nssv1751682,nssv1751713,nssv1751685,nssv1751676,nssv1751677,nssv1751692,nssv1751663,nssv1751667,nssv1751720,nssv1751679,nssv1751694,nssv1751688,nssv1751671,nssv1751710 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv16e59 1 1681850 1682148 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330776,esv3412710 M 185 2 0 "" NA19239,NA19240 esv6099 1 1683775 1683962 CNV gain Ahn_et_al_2009 19470904 Sequencing essv28540 M 1 0 0 "" nsv545027 1 1688102 1732685 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708616,nssv708615 M 17421 0 2 "" dgv39n54 1 1689422 1722233 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545028,nsv545029 M 17421 0 2 "" nsv545030 1 1689422 1774697 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708619 M 17421 1 0 "" esv2764265 1 1696479 1741164 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004902,essv7004887,essv7004881,essv7004880,essv7004882,essv7004884,essv7004883,essv7004886,essv7004885,essv7004888,essv7004896,essv7004892,essv7004891,essv7004901,essv7004890,essv7004893,essv7004895,essv7004894,essv7004897,essv7004898,essv7004899,essv7004909,essv7004905,essv7004908,essv7004904,essv7004903,essv7004906,essv7004907,essv7004912,essv7004910 M 1109 2 27 "" RW_0007,RW_0008,RW_0057,RW_0062,RW_0075,RW_0108,RW_0119,RW_0137,RW_0154,RW_0162,RW_0166,RW_0179,RW_0186,RW_0203,RW_0221,RW_0276,RW_0324,RW_0341,RW_0359,RW_0510,RW_0512,RW_0523,RW_0529,RW_0533,RW_0560,RW_0645,RW_0646,RW_0662,RW_0663 nsv442858 1 1696479 1741164 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617447,nssv1617469,nssv1617491,nssv1617636,nssv1617436,nssv1617425,nssv1617503,nssv1617602,nssv1617168,nssv1617614,nssv1617358,nssv1617369,nssv1617057,nssv1617547,nssv1616835,nssv1617558,nssv1616946,nssv1617380,nssv1617414,nssv1617569,nssv1617525,nssv1617536,nssv1617458,nssv1617279,nssv1617514,nssv1617392,nssv1617625,nssv1617591,nssv1617480,nssv1617580,nssv1617403 M 270 6 25 "" NA07056,NA10835,NA10839,NA12003,NA12006,NA12144,NA12248,NA12740,NA12750,NA12751,NA12762,NA18504,NA18523,NA18537,NA18552,NA18582,NA18620,NA18632,NA18635,NA18852,NA18854,NA18940,NA18976,NA18994,NA19144,NA19145,NA19200,NA19204,NA19205,NA19207,NA19208 nsv545031 1 1696548 1754601 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708620 M 17421 1 0 "" nsv436343 1 1698179 1752741 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466028 M 2 0 1 "" NA18505 nsv834091 1 1701359 1880638 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443851 M 95 0 1 "" nsv482168 1 1702731 1724352 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558529 M 1 1 0 "" KB1 nsv822475 1 1703561 1749146 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1439447 M 31 1 0 "" NA18537 nsv822586 1 1703762 1719374 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1438578 M 31 1 0 "" NA18973 nsv822697 1 1703766 1735718 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422355 M 31 0 1 "" NA18552 nsv545032 1 1706566 1732685 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708622,nssv708623,nssv708621,nssv708624 M 17421 0 4 "" dgv40n54 1 1706566 1749003 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545034,nsv545033,nsv545037 M 17421 0 5 "" dgv41n54 1 1713469 1740343 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545035,nsv545036 M 17421 0 3 "" nsv822809 1 1716430 1735718 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431056 M 31 0 1 "" AK18 nsv509368 1 1716892 1716892 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623768 M 4 1 0 "" NA18994 nsv436733 1 1717187 1717256 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466139 M 2 1 0 "" NA18505 nsv159838 1 1717587 1717637 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178416 M 24 "" esv988165 1 1717612 1717662 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570116 M 3 0 1 "" HuRef esv1455500 1 1717624 1717675 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4050580 M 2 0 1 "" HuRef nsv160496 1 1717655 1717705 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179074 M 24 "" esv6106 1 1718011 1719350 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28547 M 1 0 0 "" nsv955437 1 1718240 1719120 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000429 M 1 0 1 "" BILGI_BIOE nsv160062 1 1718277 1719238 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178640 M 24 "" nsv160158 1 1719164 1719164 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178736 M 24 "" esv2668621 1 1719720 1720502 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6591585,essv5497193,essv6567674,essv6236522,essv6574947,essv5459191,essv6150455,essv5705033,essv5761947,essv5824414,essv5707911,essv5681328,essv6382267,essv6161260,essv5811208,essv6305366,essv5851810,essv5497841,essv5447015,essv5915606,essv6431866,essv6442324,essv6481896,essv6429076,essv5428122,essv6491661,essv5427661,essv5777711,essv5945228,essv5766798,essv6450861,essv5757432,essv5996000,essv6441545,essv6405662,essv6026905,essv6423905,essv6181979,essv5414059,essv5721102,essv6211439,essv5629650,essv5538931,essv5786016,essv5526479,essv5640630,essv5679734,essv6478047,essv5734885,essv5740387,essv6288639,essv6551084,essv5829857,essv6165381,essv5925180,essv6006807,essv5842807,essv6441948,essv6136806,essv6153819,essv6119048,essv6383329,essv6412603,essv5857834,essv6020832,essv5416521,essv6057054,essv5501939,essv5979668,essv5445813,essv5545500,essv5854246,essv6509143,essv6221133,essv6159658,essv6248804,essv6101359,essv6502114,essv5400219,essv5493869,essv5511908,essv5533725,essv5609773,essv6174707,essv6333757,essv6214341,essv5521262,essv5875369,essv5957397,essv6172833,essv6208300,essv5556298,essv5509797,essv5415020,essv5858348,essv6183585,essv5981084,essv5729436,essv5533975,essv6368978,essv6008529 M 1151 0 101 "" HG00112,HG00126,HG00133,HG00158,HG00258,HG00276,HG00326,HG00357,HG00635,HG00641,HG00704,HG00737,HG01067,HG01094,HG01101,HG01111,HG01112,HG01124,HG01133,HG01353,HG01375,HG01497,HG01521,NA06989,NA07037,NA07056,NA11892,NA11920,NA11994,NA12155,NA12341,NA12347,NA12717,NA18488,NA18507,NA18535,NA18541,NA18565,NA18567,NA18615,NA18617,NA18621,NA18868,NA18873,NA18973,NA18988,NA18989,NA19000,NA19004,NA19056,NA19057,NA19059,NA19060,NA19066,NA19068,NA19072,NA19078,NA19079,NA19083,NA19087,NA19092,NA19189,NA19235,NA19317,NA19334,NA19346,NA19350,NA19376,NA19381,NA19383,NA19384,NA19391,NA19394,NA19397,NA19403,NA19431,NA19467,NA19625,NA19652,NA19679,NA19684,NA19700,NA19704,NA19707,NA19712,NA19717,NA19725,NA19729,NA19731,NA19755,NA19776,NA19782,NA19835,NA19901,NA19917,NA19920,NA20507,NA20761,NA20768,NA20804,NA20815 dgv42n54 1 1727506 1752126 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545039,nsv545038 M 17421 0 2 "" nsv950521 1 1729062 1760461 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997181 M 1 0 1 "" BILGI_BIOE nsv545040 1 1732580 1740343 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708636,nssv708635 M 17421 0 2 "" nsv945747 1 1734675 1737148 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750113,nssv1749174,nssv1750143,nssv1749162,nssv1750116,nssv1749159,nssv1750123,nssv1749165,nssv1750141,nssv1750158,nssv1749156,nssv1749168,nssv1750121,nssv1749161,nssv1750154,nssv1749172,nssv1750135,nssv1749158,nssv1750144,nssv1750166,nssv1750151,nssv1750163,nssv1749178,nssv1749175,nssv1750155,nssv1749157,nssv1750134,nssv1749167,nssv1750168,nssv1750161,nssv1750169,nssv1749163,nssv1750148,nssv1750162,nssv1750133,nssv1749173,nssv1750122,nssv1749164,nssv1750104,nssv1749169,nssv1750115,nssv1749170,nssv1750110,nssv1750157,nssv1750131,nssv1749160,nssv1750125,nssv1750159,nssv1750108,nssv1750165,nssv1750170,nssv1749171,nssv1750130,nssv1749166,nssv1750146,nssv1750160,nssv1750156,nssv1750109,nssv1750124,nssv1750150,nssv1750164,nssv1750129,nssv1750128,nssv1749176,nssv1750117,nssv1749179,nssv1750138,nssv1750139,nssv1750147,nssv1750173,nssv1750149,nssv1750107,nssv1750142,nssv1750174,nssv1750106,nssv1750145,nssv1750171,nssv1750118,nssv1750167,nssv1750112,nssv1750172,nssv1750152,nssv1750120,nssv1750153,nssv1750119,nssv1750111,nssv1750114,nssv1750175,nssv1750105,nssv1750126,nssv1750176,nssv1750140,nssv1750137,nssv1750127,nssv1750132,nssv1749177,nssv1750136 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3408726 1 1749607 1749628 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863669,essv7863670 M 185 2 0 "" NA11992,NA18522 esv1736683 1 1749628 1749628 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3785632 M 2 1 0 "" HuRef nsv945749 1 1751857 1760427 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750184,nssv1750186,nssv1750185,nssv1750180,nssv1750179,nssv1750177,nssv1750183,nssv1750181,nssv1750182,nssv1750187,nssv1750178 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545041 1 1753033 1780259 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708637 M 17421 0 1 "" nsv951380 1 1785162 1791261 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997192 M 1 0 1 "" BILGI_BIOE nsv834335 1 1813471 2001966 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443962 M 95 0 1 "" esv2619193 1 1839575 1846021 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5309496 M 1 0 1 "" NA18507 esv2658596 1 1840796 1842205 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5493454 M 1151 0 1 "" HG00146 esv2666680 1 1842370 1844211 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5578378 M 1151 0 1 "" NA18983 nsv478764 1 1856393 1856393 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015949 M 9 1 0 "" NA18507 nsv10272 1 1889015 1891873 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv21425,nssv24617,nssv24607,nssv24619,nssv21434,nssv21432,nssv18097,nssv26884,nssv28028,nssv21437,nssv28034,nssv21422,nssv21440,nssv28930,nssv29276,nssv28535,nssv28044 M 31 17 0 "" NA07029,NA07048,NA10847,NA10863,NA11830,NA12740,NA12872,NA18502,NA18504,NA18517,NA18552,NA18563,NA18572,NA18853,NA19007,NA19144,NA19173 nsv951400 1 1889362 1943761 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997204 M 1 0 1 "" BILGI_BIOE dgv17e59 1 1897953 1899051 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3359268,esv3369206 M 185 2 0 "" NA19239,NA19240 nsv10383 1 1915176 1928442 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24603 M 31 1 0 "" NA18502 esv2587332 1 1929076 1929525 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5262341 M 1 1 0 "" NA18507 esv3380384 1 1929180 1929529 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652057 M 185 1 0 "" NA19240 nsv512709 1 1929285 1929425 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625333 M 1 1 0 "" 1 esv6744 1 1934814 1935785 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29185 M 1 0 0 "" esv5421 1 1934865 1935733 CNV loss Wang_et_al_2008 18987735 Sequencing essv27862 M 1 0 1 "" YH esv3385307 1 1937753 1939351 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692082 M 185 1 0 "" NA19240 esv2663496 1 1948335 1948651 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6416178,essv6123824,essv5724864,essv5534277,essv6133148,essv6123431 M 1151 0 6 "" NA18505,NA18868,NA19236,NA19257,NA19469,NA19470 nsv834446 1 1960604 2156435 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444073 M 95 0 1 "" esv2381744 1 1967757 1968086 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4505691 M 1 0 1 "" NA18507 esv3385175 1 1970753 1971551 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692084 M 185 1 0 "" NA19240 dgv43n54 1 1978932 1979778 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545043,nsv545042 M 17421 0 2 "" esv25575 1 1978938 1982491 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv21134,esv13192,esv17032 M 40 2 20 "" NA06985,NA07037,NA11993,NA12044,NA12156,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18505,NA18517,NA18858,NA18861,NA18916,NA19114,NA19147,NA19190,NA19257 nsv545044 1 1979139 1979880 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708640 M 17421 1 0 "" esv2668919 1 1979583 1979937 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6587683,essv6527584,essv6060675,essv6043891,essv5685603,essv5940360,essv6153321,essv5826171,essv5788407,essv5769142,essv5675482,essv6458298,essv6104627,essv5894414,essv6098453,essv5427294,essv6234188,essv5776129,essv5571234,essv5966586,essv6033207,essv6255706,essv5440413,essv5983187,essv5706855,essv6155123,essv5417396,essv6379496,essv6114367,essv5942871,essv6000581,essv5492663,essv6348591,essv5674802,essv5513674,essv5995024,essv6156802,essv5959123,essv5908516,essv5935868,essv6201401,essv5953733,essv6198815,essv6515669,essv5430434,essv5640367,essv5660200,essv5999401,essv6189086,essv6058936 M 1151 0 50 "" HG00159,HG00319,HG00324,HG00534,HG01047,HG01048,HG01055,HG01079,HG01101,HG01170,HG01250,HG01378,HG01384,HG01437,HG01440,HG01488,HG01492,NA07051,NA07346,NA18486,NA18510,NA18550,NA18552,NA18566,NA18570,NA18577,NA18582,NA18619,NA18934,NA18977,NA19007,NA19313,NA19328,NA19375,NA19376,NA19379,NA19390,NA19391,NA19394,NA19452,NA19712,NA19789,NA20340,NA20341,NA20344,NA20503,NA20540,NA20761,NA20795,NA20803 esv994854 1 1981496 1982301 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586225 M 3 0 1 "" HuRef esv1576320 1 1981886 1981886 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4312046 M 2 1 0 "" HuRef nsv958160 1 1991544 1993073 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005154 M 1 0 1 "" BILGI_BIOE esv1718201 1 1993719 1993719 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4140788 M 2 1 0 "" HuRef nsv951425 1 2018162 2112261 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997215 M 1 0 1 "" BILGI_BIOE nsv822920 1 2056828 2059117 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436323 M 31 1 0 "" NA18542 nsv2520 1 2063294 2089621 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1058 M 9 1 0 "" NA19240 nsv509479 1 2072311 2176998 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619762,nssv619761 M 4 1 0 "" NA10860 esv1002714 1 2085590 2085590 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575233 M 3 1 0 "" HuRef esv1162822 1 2085782 2085782 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3941411 M 2 1 0 "" HuRef nsv3631 1 2091305 2125513 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7778 M 9 1 0 "" NA12156 nsv470681 1 2092625 2182126 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547651 M 443 0 1 "" HGDP00697 esv2668737 1 2093051 2096058 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6574210,essv5797826,essv6566834,essv5597900,essv6564858,essv5828436,essv6423410,essv5592270,essv6396289,essv6229381,essv6249120,essv6220938,essv5681468,essv6085392,essv6479850,essv5817670,essv5502714,essv6154406,essv6295269,essv5562511,essv6255118,essv6308201,essv5668953,essv5586775,essv5420709,essv5500049,essv5886970,essv5521064,essv5894647,essv6315088,essv5900192,essv6028858,essv6474764,essv5633795,essv5892031,essv6231552,essv5636927,essv5690079,essv5950655,essv5657047,essv6422341 M 1151 0 41 "" NA07051,NA07346,NA07347,NA11829,NA11831,NA11919,NA11992,NA11993,NA12004,NA12044,NA12717,NA12750,NA12751,NA12763,NA12892,NA18486,NA18504,NA18508,NA18516,NA18520,NA18522,NA18523,NA18853,NA18871,NA18953,NA18967,NA18972,NA18974,NA18976,NA18981,NA19107,NA19116,NA19138,NA19144,NA19152,NA19159,NA19172,NA19238,NA19239,NA19240,NA19676 esv27078 1 2093104 2095964 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16667 M 40 0 2 "" NA18508,NA19240 esv4759 1 2106217 2106783 CNV loss Wang_et_al_2008 18987735 Sequencing essv27200 M 1 0 1 "" YH dgv1e194 1 2106310 2106834 CNV deletion Bentley_et_al_2008 18987734 Sequencing esv1927480,esv2345828 M 1 0 1 "" NA18507 nsv160060 1 2106872 2106872 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178638 M 24 "" nsv460616 1 2109497 2158087 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537157 M 1557 0 1 "" NINDS_69 nsv545045 1 2109497 2158087 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172578 M 17421 0 1 "" NINDS_69 esv2196740 1 2109980 2110332 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4845456 M 1 0 1 "" NA18507 nsv834557 1 2117631 2311104 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444962,nssv1444517,nssv1445073,nssv1444628,nssv1445184,nssv1444184,nssv1444295,nssv1444739,nssv1445295,nssv1444851,nssv1444406 M 95 0 11 "" esv2492368 1 2121082 2121573 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5343806 M 1 1 0 "" NA18507 esv3388837 1 2121253 2124451 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692102 M 185 1 0 "" NA19239 esv26913 1 2121522 2124536 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv18512,esv15600 M 40 7 20 "" NA06985,NA07037,NA07045,NA11931,NA12004,NA12006,NA12287,NA12489,NA12828,NA12878,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv821592 1 2121522 2124606 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420402 M 1 0 1 "" NA10851 nsv951470 1 2121762 2124761 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997226 M 1 0 1 "" BILGI_BIOE dgv44n54 1 2121766 2123934 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545056,nsv545046,nsv545049,nsv545052 M 17421 0 22 "" dgv45n54 1 2121766 2124199 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545058,nsv545054,nsv545051,nsv545050,nsv545047,nsv545048 M 17421 18 0 "" esv2505453 1 2121945 2124673 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5233482 M 1 0 1 "" NA18507 esv4841 1 2122077 2124494 CNV loss Wang_et_al_2008 18987735 Sequencing essv27282 M 1 0 1 "" YH dgv46n54 1 2122142 2124062 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545057,nsv545053,nsv545060 M 17421 32 16 "" esv1008133 1 2122184 2124371 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586410 M 3 1 0 "" HuRef nsv545055 1 2122318 2123811 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708673 M 17421 1 0 "" dgv47n54 1 2122641 2124062 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545059,nsv545061 M 17421 0 7 "" esv1138741 1 2123106 2123214 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3618162 M 2 0 1 "" HuRef nsv545062 1 2123276 2146433 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708737 M 17421 0 1 "" nsv951471 1 2134162 2139261 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997237 M 1 0 1 "" BILGI_BIOE esv2313378 1 2142277 2142600 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4884634 M 1 0 1 "" NA18507 esv4294 1 2142292 2142523 CNV loss Wang_et_al_2008 18987735 Sequencing essv26735 M 1 0 1 "" YH dgv48n54 1 2151050 2251031 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545065,nsv545063 M 17421 0 2 "" 1780862101_A nsv461727 1 2151050 2251031 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538084 M 1557 0 1 "" 1780862101_A dgv49n54 1 2151050 2289783 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545066,nsv545064 M 17421 0 2 "" nsv951530 1 2153662 2229961 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997248 M 1 0 1 "" BILGI_BIOE dgv18e59 1 2154553 2155951 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3377460,esv3434245 M 185 2 0 "" NA19239,NA19240 nsv470682 1 2188394 2378754 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547655,nssv547653,nssv547652,nssv547657,nssv547654 M 443 0 5 "" HGDP00288,HGDP00313,HGDP00546,HGDP00657,HGDP00978 nsv818111 1 2208822 2224923 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417805 M 112 0 1 "" NA18853 nsv463949 1 2208822 2263678 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv539962 M 1557 0 1 "" 1780862414_A nsv545067 1 2208822 2263678 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172580 M 17421 0 1 "" 1780862414_A nsv834668 1 2224327 2392938 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1446073,nssv1447739,nssv1450294,nssv1445406,nssv1448850,nssv1449850,nssv1446184,nssv1447406,nssv1447850,nssv1445962,nssv1449295,nssv1450406,nssv1448406,nssv1446961,nssv1445517,nssv1446295,nssv1449961,nssv1448961,nssv1447073,nssv1447961,nssv1447517,nssv1449517,nssv1448517,nssv1446406,nssv1445628,nssv1450517,nssv1449072,nssv1450072,nssv1446517,nssv1448072,nssv1445739,nssv1449183,nssv1447628,nssv1449628,nssv1447184,nssv1448628,nssv1446628,nssv1450628,nssv1448184,nssv1450183,nssv1446739,nssv1445850,nssv1448739,nssv1449739,nssv1447295,nssv1449406,nssv1446850,nssv1448295 M 95 0 48 "" esv2648351 1 2227026 2229053 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5208944 M 1 0 1 "" NA18507 esv2673961 1 2230679 2231707 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6191476 M 1151 0 1 "" NA18910 nsv951531 1 2247362 2255261 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997259 M 1 0 1 "" BILGI_BIOE nsv465060 1 2249085 2289210 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540916 M 1557 0 1 "" HGDP01351 nsv545068 1 2249085 2289210 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172581 M 17421 0 1 "" HGDP01351 nsv545069 1 2251031 2291144 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708741 M 17421 1 0 "" nsv951557 1 2266062 2564661 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997270 M 1 0 1 "" BILGI_BIOE nsv528621 1 2267618 2280410 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705251 M 2026 0 1 "" nsv545070 1 2267618 2300024 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708742 M 17421 0 1 "" nsv545071 1 2273316 2293397 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708743 M 17421 1 0 "" esv22780 1 2280621 2282736 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv20675 M 40 4 10 "" NA06985,NA11931,NA11993,NA12006,NA12239,NA12287,NA18508,NA18517,NA18523,NA18909,NA18916,NA19108,NA19240,NA19257 esv1252402 1 2280721 2280934 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3979301 M 2 0 1 "" HuRef esv1536883 1 2281202 2281289 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3775323 M 2 0 1 "" HuRef esv1025209 1 2281351 2281566 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4025462 M 2 0 1 "" HuRef esv1682069 1 2281579 2281837 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4061538 M 2 0 1 "" HuRef esv1164473 1 2281862 2281948 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3589181 M 2 0 1 "" HuRef nsv823031 1 2302774 2334866 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426364 M 31 1 0 "" AK6 nsv4742 1 2304725 2350763 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3953,nssv10842,nssv1955,nssv8452,nssv5660 M 9 5 0 "" NA12156,NA12878,NA18555,NA18956,NA19129 dgv4n67 1 2306089 2310541 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv823142,nsv823253,nsv823475,nsv823586 M 31 4 0 "" AK12,NA18564,NA18951,NA18969 nsv823364 1 2306856 2309563 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437213 M 31 1 0 "" NA18949 esv2502867 1 2324259 2326810 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5196708 M 1 0 1 "" NA18507 nsv520511 1 2376042 2377643 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697462 M 2026 0 1 "" nsv823697 1 2389693 2405919 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426365 M 31 1 0 "" AK6 nsv470684 1 2394570 2930923 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547663,nssv547659,nssv547662,nssv547669,nssv547658,nssv547661,nssv547670,nssv547671,nssv547660,nssv547664,nssv547668,nssv547666,nssv547665 M 443 0 12 "" HGDP00288,HGDP00290,HGDP00302,HGDP00313,HGDP00333,HGDP00546,HGDP00550,HGDP00556,HGDP00657,HGDP00661,HGDP00789,HGDP00978 esv2631918 1 2400813 2401808 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5353074 M 1 1 0 "" NA18507 nsv545072 1 2401592 2475448 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708744 M 17421 0 1 "" dgv1n27 1 2401592 2518955 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466171,nsv467282 M 1557 0 2 "" HGDP00607,HGDP00614 dgv50n54 1 2401592 2518955 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545073,nsv545074 M 17421 0 2 "" HGDP00607,HGDP00614 nsv512710 1 2401787 2401944 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625334 M 1 1 0 "" 1 nsv823808 1 2403141 2404395 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436324 M 31 1 0 "" NA18542 nsv545075 1 2428542 2458765 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708745 M 17421 0 1 "" nsv470685 1 2428542 2518955 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547672 M 443 1 0 "" HGDP00720 nsv545076 1 2428542 2535194 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708746 M 17421 1 0 "" nsv545077 1 2428542 2622185 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708747 M 17421 1 0 "" nsv545078 1 2434877 2499618 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172584 M 17421 0 1 "" HGDP00823 esv2668714 1 2436344 2436570 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6583990,essv6265746,essv6572195,essv5583100,essv5925401,essv6326352,essv6135652,essv5643676,essv6269044,essv6417282,essv6080801,essv6164878,essv6015565,essv6402562,essv6273610,essv5572816,essv5602173,essv6489486,essv6095950,essv6436239,essv6369582,essv5938607,essv6231320,essv5461953,essv5608646,essv5685920,essv6470051,essv5890375,essv6378265,essv5796448,essv5584739,essv5678679,essv6319824,essv5740169,essv5565564,essv5561041,essv5717656,essv5442509,essv5655601,essv6288922,essv5930767,essv6367710,essv6393176,essv5831388,essv5423514,essv5810986,essv5414235,essv6052252,essv5772983,essv6500591,essv6149461,essv5728098,essv5682628,essv5863149,essv5932921,essv6464841,essv5899355,essv5967212,essv6544556,essv5974767,essv5614270,essv6255206,essv6412544,essv6310386,essv6167981,essv6244737,essv5905581,essv5503301,essv5903711,essv5671033,essv6334402,essv5523762,essv5425178,essv5589777,essv6376204,essv6344808,essv6307009,essv5901413,essv6529134,essv5519123,essv5530784,essv5467369,essv6374994,essv5630844,essv6303495,essv6150234,essv6503964,essv5867450,essv5593070,essv6124602,essv5437439,essv6106037,essv6136547,essv5610738,essv5648999,essv6137418,essv5448132,essv6052052,essv6176979,essv6510339,essv5477340,essv5673453,essv6163616,essv5427393,essv6533947,essv5646611,essv6420983,essv6061718,essv6072434,essv5899708,essv6378150,essv5642752,essv6499911,essv5641464,essv6148045,essv6176421,essv6404744,essv5400745,essv5624107,essv6300274,essv5911315,essv5432359,essv5631580,essv6410642,essv5412390,essv5940301,essv5672295,essv5439678,essv5632537 M 1151 0 129 "" HG00125,HG00136,HG00138,HG00139,HG00250,HG00254,HG00275,HG00276,HG00278,HG00281,HG00282,HG00309,HG00310,HG00320,HG00324,HG00325,HG00328,HG00334,HG00336,HG00337,HG00343,HG00375,HG00418,HG00419,HG00422,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00533,HG00534,HG00537,HG00543,HG00583,HG00584,HG00589,HG00590,HG00607,HG00608,HG00613,HG00614,HG00619,HG00620,HG00650,HG00651,HG00653,HG00654,HG00657,HG00663,HG00672,HG00689,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708,HG01052,HG01060,HG01070,HG01083,HG01108,HG01170,HG01171,HG01173,HG01334,HG01350,HG01351,HG01365,HG01390,HG01441,HG01492,NA18530,NA18536,NA18542,NA18543,NA18544,NA18546,NA18548,NA18549,NA18550,NA18557,NA18558,NA18559,NA18561,NA18570,NA18577,NA18582,NA18596,NA18597,NA18599,NA18602,NA18606,NA18610,NA18611,NA18612,NA18613,NA18622,NA18632,NA18637,NA18638,NA18964,NA19371,NA19375,NA19379,NA19381,NA19384,NA19390,NA19394,NA19404,NA19428,NA19720,NA19747 esv3444937 1 2440304 2440717 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652069 M 185 1 0 "" NA19240 esv988545 1 2440511 2440580 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577413 M 3 0 1 "" HuRef dgv3e199 1 2440521 2442899 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2677055,esv2667055 M 1151 0 1 "" NA18574 esv1513739 1 2440558 2440558 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4248036 M 2 1 0 "" HuRef esv2758914 1 2444815 2448810 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757718 M 270 0 1 "" NA18508 esv25748 1 2458774 2459863 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15167,esv12176 M 40 0 12 "" NA06985,NA11894,NA12004,NA12239,NA12287,NA18511,NA18858,NA18909,NA18916,NA19129,NA19147,NA19240 nsv545079 1 2459149 2518955 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708748 M 17421 0 1 "" esv2668467 1 2459367 2459613 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6577821,essv5519074,essv6551632,essv6226517,essv6551924,essv6281611,essv6569569,essv6318976,essv5995244,essv5844195,essv5735619,essv5809808,essv6394630,essv5865427,essv6072856,essv6536705,essv6365388,essv6015336,essv6425849,essv5403060,essv5613982,essv6090639,essv5807802,essv5821058,essv6409874,essv6247847,essv6081812,essv5984136,essv5688839,essv6512160,essv5815536,essv5519029,essv5804372,essv6090319,essv6494753,essv5438814,essv5738711,essv5598418,essv5492017,essv5825375,essv5447025,essv5710726,essv5780323,essv5684887,essv6325270,essv5948931,essv5631318,essv5415337,essv5744948,essv5602357,essv5775590,essv6123846,essv6486007,essv5684170,essv5920836,essv6459378,essv5726242,essv5994541,essv5476099,essv6221066,essv6364378,essv6540434,essv6544336,essv5897044,essv5456432,essv5581589,essv5755072,essv5689636,essv5505829,essv5875862,essv5843562,essv6068947,essv5640198,essv5538854,essv5859906,essv5753449,essv6057652,essv5448530,essv6203532,essv5501976,essv5835922,essv6284888,essv6238640,essv5923266,essv6105477,essv6475241,essv5987314,essv5551104,essv5425402,essv6363664,essv6055830,essv6219456,essv5551010,essv6224671,essv5990143,essv5575722,essv6057284,essv6029442,essv6180823,essv5929017,essv5879513,essv5914838,essv6107284,essv5914379,essv6051290,essv5475603,essv5563893,essv6141211,essv5613929,essv6406748,essv5538311,essv5546308,essv5555656,essv6296062,essv6416104,essv6185226,essv5505273,essv6014555,essv5963925,essv5506006,essv5887270,essv5471300,essv6519149,essv5964575,essv5558047,essv6504100,essv6409825,essv5547485,essv5934369,essv5551336,essv5478507,essv6096498 M 1151 0 132 "" HG00124,HG00125,HG00136,HG00138,HG00139,HG00159,HG00185,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00258,HG00260,HG00261,HG00268,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00310,HG00313,HG00315,HG00318,HG00320,HG00321,HG00323,HG00327,HG00334,HG00335,HG00337,HG00338,HG00339,HG00342,HG00345,HG00346,HG00375,HG00418,HG00419,HG00421,HG00422,HG00427,HG00437,HG00448,HG00476,HG00478,HG00479,HG00500,HG00501,HG00513,HG00524,HG00536,HG00537,HG00543,HG00557,HG00581,HG00584,HG00589,HG00613,HG00650,HG00651,HG00654,HG00662,HG00663,HG00684,HG00690,HG00692,HG00693,HG00699,HG00704,HG00740,HG01048,HG01052,HG01055,HG01060,HG01061,HG01066,HG01069,HG01070,HG01080,HG01082,HG01083,HG01101,HG01102,HG01107,HG01170,HG01171,HG01204,HG01334,HG01350,HG01353,HG01357,HG01374,HG01375,HG01390,HG01440,HG01441,HG01462,HG01488,NA12003,NA18532,NA18542,NA18543,NA18549,NA18557,NA18566,NA18570,NA18572,NA18596,NA18597,NA18599,NA18610,NA18613,NA18621,NA18623,NA18624,NA18633,NA18636,NA18964,NA19257,NA19372,NA19374,NA19379,NA19770,NA20543 esv989190 1 2462249 2462249 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583245 M 3 1 0 "" HuRef esv1307242 1 2462338 2462338 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3609131 M 2 1 0 "" HuRef nsv545080 1 2464013 2553994 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708749 M 17421 0 1 "" nsv545081 1 2475448 2515441 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172585 M 17421 0 1 "" HGDP01048 nsv823920 1 2482305 2552402 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440793 M 31 1 0 "" NA18969 nsv818222 1 2492683 2553994 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417806,nssv1417514 M 112 0 2 "" NA18853,NA18968 nsv7171 1 2512559 2606632 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9287,nssv5821,nssv9802,nssv4140,nssv9849,nssv1153,nssv10880,nssv5743,nssv6533,nssv4052,nssv2141,nssv6621,nssv1241,nssv10864,nssv2047,nssv10990 M 9 0 0 "" NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv824031 1 2520800 2551658 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426366 M 31 1 0 "" AK6 esv2583485 1 2522196 2523009 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5387623 M 1 1 0 "" NA18507 esv3402792 1 2522774 2522992 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652074 M 185 1 0 "" NA19240 esv1165961 1 2522816 2522816 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3796592 M 2 1 0 "" HuRef nsv1 1 2525151 2553994 OTHER inversion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv1 M 1 0 0 "" NA15510 nsv545082 1 2536231 2597243 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708750 M 17421 0 1 "" nsv436691 1 2553995 2565862 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466250 M 2 0 0 "" NA18505 esv3447351 1 2553995 2567471 OTHER inversion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808959 M 185 0 0 "" NA12878 dgv1n47 1 2553995 2567688 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nsv499569,nsv499637,nsv499113 M 9 0 0 "" dgv1n50 1 2553995 2567688 OTHER inversion Arlt_et_al_2011 21212237 Sequencing,SNP array nsv513633,nsv513632 M 1 0 0 "" 1 esv1699286 1 2553995 2567688 OTHER inversion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4270452 M 2 0 0 "" HuRef esv2471749 1 2553995 2567688 OTHER inversion McKernan_et_al_2009 19546169 Sequencing essv5165573 M 1 0 0 "" NA18507 nsv824475 1 2561573 2562016 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431952 M 31 0 1 "" NA18972 nsv824364 1 2561573 2562675 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434859 M 31 0 1 "" NA18942 nsv951592 1 2564862 2613961 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997281 M 1 0 1 "" BILGI_BIOE dgv5n67 1 2564896 2566545 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824142,nsv824253 M 31 0 2 "" AK20,NA18972 nsv829648 1 2567689 2640901 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450739 M 95 0 1 "" nsv545083 1 2575976 2653099 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708751 M 17421 1 0 "" nsv428399 1 2622539 3235926 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv452575 M 62 1 0 "" HGDP00450 nsv951593 1 2628062 2645961 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997292 M 1 0 1 "" BILGI_BIOE dgv19e59 1 2630153 2631351 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3399585,esv3368203 M 185 2 0 "" NA19239,NA19240 esv21805 1 2634485 2702743 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12824,esv21190,esv18116,esv12016,esv16589,esv12744 M 40 23 8 "" NA06985,NA07037,NA07045,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510,NA18502,NA18508,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19190,NA19225,NA19240 nsv511152 1 2634563 2635043 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626021 M 1 0 1 "" 1 esv1931226 1 2634590 2635284 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4612274 M 1 0 1 "" NA18507 esv2669821 1 2634756 2635184 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5814263,essv6521997,essv5471160,essv5997909,essv5693082,essv5716031,essv6483210,essv5502647,essv6370619,essv6034164,essv5690458,essv6594080,essv6016573,essv6351205,essv5411742,essv6000041,essv6339798,essv6230234,essv6588197,essv6025747,essv6431904,essv6394674,essv5788468,essv5752773,essv6059728,essv6081713,essv5601616,essv6217295,essv5711594,essv6393770,essv5936146,essv5713670,essv6568242,essv6132494,essv5741752,essv6517570,essv5679435,essv5759687,essv5946004,essv5938131,essv6520633,essv6237014,essv5838103,essv6331001,essv5721497,essv6273379,essv6160881,essv5702203,essv5774401,essv6115352,essv6376974,essv5568489,essv6451395,essv5897265,essv5816058,essv5796693,essv6541573,essv6041178,essv6083878,essv5900200,essv6088009,essv6039374,essv5433007,essv6169758,essv6443064,essv6328384,essv5607775,essv5842808,essv5415958,essv5666396,essv6363658,essv6558785,essv6368487,essv5483427,essv5481367,essv6526087,essv5790573,essv5884891,essv5972540,essv5558599,essv6489999,essv5463132,essv6144433,essv6075008,essv6169480,essv5552992,essv5639073,essv6109200,essv6078969,essv6162007,essv6204263,essv5539969,essv6068516,essv5608652,essv6289413,essv5837505,essv5501129,essv5655408,essv5771945,essv6519108,essv5522908,essv5861950,essv6529647,essv6488723,essv5517716,essv5659713,essv6363573,essv6090582,essv6090000,essv5462610,essv5484855,essv5546957,essv5980680 M 1151 0 113 "" HG00100,HG00103,HG00108,HG00111,HG00112,HG00123,HG00133,HG00136,HG00137,HG00152,HG00174,HG00180,HG00232,HG00236,HG00237,HG00243,HG00250,HG00275,HG00284,HG00285,HG00313,HG00328,HG00331,HG00336,HG00342,HG00346,HG00369,HG00478,HG00512,HG00543,HG00610,HG00613,HG00654,HG00684,HG00692,HG00693,HG00704,HG00734,HG01047,HG01055,HG01066,HG01069,HG01082,HG01124,HG01134,HG01136,HG01140,HG01334,HG01354,HG01356,HG01359,HG01441,HG01461,HG01521,NA07051,NA11930,NA12154,NA12282,NA12717,NA12748,NA12778,NA12829,NA12830,NA18489,NA18520,NA18542,NA18550,NA18566,NA18579,NA18612,NA18616,NA19093,NA19102,NA19130,NA19213,NA19313,NA19315,NA19317,NA19331,NA19372,NA19377,NA19394,NA19399,NA19403,NA19438,NA19439,NA19443,NA19455,NA19463,NA19468,NA19625,NA19663,NA19675,NA19676,NA19678,NA19685,NA19703,NA19818,NA19920,NA20299,NA20332,NA20341,NA20356,NA20516,NA20525,NA20530,NA20582,NA20757,NA20768,NA20778,NA20795,NA20818,NA20819 esv1624207 1 2635078 2635078 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4164733 M 2 1 0 "" HuRef esv994553 1 2641028 2652640 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565426 M 3 1 0 "" HuRef nsv824586 1 2649029 2652002 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1438579 M 31 1 0 "" NA18973 nsv545084 1 2650602 2654864 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708752 M 17421 0 1 "" nsv545085 1 2650901 2654864 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708753 M 17421 1 0 "" nsv161117 1 2651590 2652156 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179695 M 24 "" dgv20e59 1 2651653 2702751 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3350831,esv3450152,esv3380852,esv3429744,esv3414646,esv3435510 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv951028 1 2652062 2656061 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997303 M 1 1 0 "" BILGI_BIOE dgv1n6 1 2652120 2659650 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv160392,nsv160178 M 24 "" esv1381913 1 2652131 2652131 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4214883 M 2 1 0 "" HuRef nsv820462 1 2652161 2702743 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420513 M 1 1 0 "" NA10851 nsv160953 1 2652261 2652861 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179531 M 24 "" nsv160689 1 2652493 2653094 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179267 M 24 "" esv999533 1 2652788 2653630 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3568762 M 3 0 1 "" HuRef nsv159794 1 2653207 2654893 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178372 M 24 "" nsv159997 1 2653436 2653596 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178575 M 24 "" nsv160053 1 2653868 2653868 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178631 M 24 "" dgv4e199 1 2654006 2655984 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2657692,esv2668155 M 1151 0 2 "" NA18616,NA19223 esv8624 1 2654196 2697997 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31065 M 1 0 0 "" dgv5e199 1 2654747 2684879 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2674419,esv2659426,esv2662334 M 1151 0 8 "" HG00635,HG01516,NA12399,NA18943,NA18982,NA19085,NA19756,NA19780 nsv545086 1 2654864 2682023 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708754 M 17421 0 1 "" dgv51n54 1 2654864 2696028 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545088,nsv545087,nsv545090,nsv545089,nsv545091 M 17421 0 5 "" esv1995006 1 2656244 2677946 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4845344 M 1 0 1 "" NA18507 esv999575 1 2656341 2688816 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575600 M 3 0 1 "" HuRef nsv5853 1 2657831 2682994 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9998,nssv5901 M 9 2 0 "" NA18956,NA19129 esv1159004 1 2661808 2661808 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3785302 M 2 1 0 "" HuRef esv1780740 1 2662266 2662347 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4117042 M 2 0 1 "" HuRef esv1286791 1 2662437 2662517 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3745617 M 2 0 1 "" HuRef esv1001627 1 2662456 2663338 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584427 M 3 0 1 "" HuRef esv1366162 1 2663974 2664054 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3788684 M 2 0 1 "" HuRef esv1701153 1 2664079 2664318 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4138724 M 2 0 1 "" HuRef esv990905 1 2665314 2675147 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3573398 M 3 0 1 "" HuRef esv1348726 1 2665387 2665387 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4133439 M 2 1 0 "" HuRef esv992616 1 2665522 2669935 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581681 M 3 0 1 "" HuRef esv1068112 1 2666109 2666109 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3882975 M 2 1 0 "" HuRef esv1134902 1 2666980 2667060 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3644540 M 2 0 1 "" HuRef esv1460747 1 2668019 2668139 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3860280 M 2 0 1 "" HuRef esv1312498 1 2668798 2669038 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4349278 M 2 0 1 "" HuRef esv997173 1 2669930 2670491 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566822 M 3 0 1 "" HuRef esv1162144 1 2671397 2671919 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3966245 M 2 0 1 "" HuRef esv1394797 1 2673001 2673082 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4279125 M 2 0 1 "" HuRef nsv160294 1 2673042 2677617 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178872 M 24 "" esv1779754 1 2673742 2673742 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3803937 M 2 1 0 "" HuRef esv2672332 1 2677771 2694952 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5828566,essv5654815 M 1151 0 2 "" HG00313,NA19380 esv993173 1 2678320 2678881 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584575 M 3 0 1 "" HuRef nsv159383 1 2679129 2684830 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177961 M 24 "" esv989273 1 2680074 2682963 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3575900 M 3 0 1 "" HuRef nsv545092 1 2683129 2701859 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708760 M 17421 1 0 "" esv6961 1 2684068 2697836 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29402 M 1 0 0 "" nsv159584 1 2685016 2685376 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178162 M 24 "" nsv6964 1 2685326 2686745 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6711 M 9 1 0 "" NA12156 nsv160877 1 2686538 2692200 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179455 M 24 "" nsv7534 1 2687081 2689860 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4235 M 9 1 0 "" NA12878 esv2663943 1 2687381 2694818 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6025078 M 1151 0 1 "" NA18486 nsv160247 1 2688868 2691236 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178825 M 24 "" nsv160029 1 2691376 2697398 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178607 M 24 "" nsv160879 1 2691678 2694443 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179457 M 24 "" nsv159137 1 2691824 2691944 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177715 M 24 "" nsv160272 1 2692490 2701565 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178850 M 24 "" nsv160341 1 2694851 2695734 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178919 M 24 "" nsv545093 1 2695584 2700214 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708761 M 17421 1 0 "" esv6481 1 2698496 2699100 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28922 M 1 0 0 "" esv1095177 1 2701122 2701122 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3698632 M 2 1 0 "" HuRef nsv160000 1 2701352 2701551 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178578 M 24 "" nsv159461 1 2701825 2702667 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178039 M 24 "" esv23086 1 2767708 2778413 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19931,esv10077 M 40 12 2 "" NA07037,NA12287,NA12489,NA18502,NA18508,NA18517,NA18858,NA18861,NA18907,NA18909,NA19099,NA19190,NA19225,NA19240 nsv821258 1 2767708 2778493 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420624 M 1 1 0 "" NA10851 nsv545094 1 2767955 2774719 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708762 M 17421 1 0 "" dgv21e59 1 2768645 2775544 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3347403,esv3330891,esv3448150,esv3409631,esv3418717,esv3419182 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 esv1006680 1 2772978 2773137 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585900 M 3 0 1 "" HuRef esv1125194 1 2773565 2774531 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4352306 M 2 0 1 "" HuRef esv2661153 1 2776483 2780558 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6292297 M 1151 0 1 "" HG00404 nsv474526 1 2795000 2795000 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019475 M 9 1 0 "" NA18956 nsv951075 1 2796436 2835835 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997353 M 1 0 1 "" BILGI_BIOE esv3363378 1 2820127 2820425 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692269 M 185 1 0 "" NA19239 nsv469835 1 2824136 3005987 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1675009 M 265 0 1 "" esv2455629 1 2849392 2850260 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5201421 M 1 1 0 "" NA18507 esv1778376 1 2849464 2849464 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3921204 M 2 1 0 "" HuRef nsv951916 1 2850836 2991636 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2998256 M 1 0 1 "" BILGI_BIOE esv2606115 1 2851722 2853186 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5324371 M 1 0 1 "" NA18507 esv1145877 1 2852080 2852080 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4076825 M 2 1 0 "" HuRef nsv455662 1 2852977 2912986 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv533180 M 1557 0 1 "" HGDP00515 nsv545095 1 2852977 2912986 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172586 M 17421 0 1 "" HGDP00515 esv1008548 1 2856219 2859560 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564145 M 3 1 0 "" HuRef nsv521946 1 2870528 2872543 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694715 M 2026 0 1 "" esv2676249 1 2896128 2896635 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6584383 M 1151 0 1 "" NA18522 dgv22e59 1 2896227 2897525 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3450928,esv3390986,esv3335313 M 185 3 0 "" NA19238,NA19239,NA19240 dgv23e59 1 2915427 2916625 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3350598,esv3336132 M 185 2 0 "" NA19239,NA19240 nsv159525 1 2921271 2921338 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178103 M 24 "" dgv24e59 1 2944227 2945625 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3422535,esv3337021 M 185 2 0 "" NA19239,NA19240 esv1009726 1 2949573 2949719 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577776 M 3 0 1 "" HuRef esv1533261 1 2949807 2949954 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4287368 M 2 0 1 "" HuRef esv2132425 1 2959883 2960330 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4889243 M 1 0 1 "" NA18507 esv3109 1 2959994 2960266 CNV loss Wang_et_al_2008 18987735 Sequencing essv25550 M 1 0 1 "" YH esv993932 1 2960029 2960148 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566726 M 3 0 1 "" HuRef esv1703346 1 2960036 2960156 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3656039 M 2 0 1 "" HuRef nsv954197 1 2960075 2960173 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000491 M 1 0 1 "" BILGI_BIOE nsv470686 1 2973013 3067523 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547673 M 443 0 1 "" HGDP00978 esv2671460 1 2974631 2974764 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5476303,essv5773475,essv5724554,essv6329559,essv5487623,essv5920819 M 1151 0 6 "" HG00344,HG01497,NA18519,NA19138,NA19371,NA19428 esv25503 1 2976230 2978355 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21208 M 40 0 2 "" NA12006,NA18907 nsv545096 1 2976395 2977942 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708764,nssv708763 M 17421 2 0 "" nsv545097 1 2992606 3002658 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708765 M 17421 0 1 "" esv7294 1 2994754 2995470 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29735 M 1 0 0 "" esv4855 1 2994926 2995370 CNV loss Wang_et_al_2008 18987735 Sequencing essv27296 M 1 0 1 "" YH esv2667586 1 2994972 2995286 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6584130,essv6181482,essv6500333,essv5642245,essv6594821,essv5985580,essv6567925,essv6320741,essv6499626,essv5997269,essv6535176,essv5432275,essv6592379,essv6074675,essv6570143,essv5965992,essv6557510,essv6047266,essv6560103,essv5720133,essv6501835,essv6153588,essv6507030,essv5750076,essv6508860,essv5699555,essv6589446,essv6374716,essv6576278,essv5691787,essv6568335,essv6087893,essv6546084,essv5803288,essv6567597,essv5719839,essv6511759,essv5708654,essv6531586,essv6120270,essv6533516,essv6459210,essv6553706,essv5486533,essv6583551,essv6444702,essv6503607,essv5639321,essv6525387,essv5741322,essv6517932,essv5469348,essv6540235,essv6366191,essv6548915,essv6453260,essv6501274,essv6427134,essv6500485,essv5629229,essv6505896,essv5731720,essv6566499,essv5755211,essv6577574,essv5650561,essv6503602,essv6195869,essv5642484,essv6347902,essv6231796,essv6287666,essv6289495,essv6097870,essv5693233,essv5717384,essv5708533,essv5701686,essv5637052,essv5725070,essv5404463,essv6090651,essv6418922,essv5480759,essv5557036,essv6488904,essv5691096,essv6061978,essv5726003,essv6124221,essv5399971,essv6107651,essv5697903,essv6079552,essv6382314,essv6304341,essv5792620,essv5584890,essv5761784,essv6141935,essv6286314,essv5856810,essv5962761,essv5794795,essv6178123,essv5827690,essv5661341,essv6425321,essv6288601,essv5997070,essv6164704,essv6304368,essv6407852,essv6025859,essv5502157,essv6325314,essv6223844,essv6138939,essv6075567,essv5777985,essv6324571,essv5671053,essv5554599,essv5778444,essv6302425,essv6409577,essv6296610,essv5786723,essv5742756,essv6062470,essv5684112,essv6150955,essv6009364,essv5701034,essv6029670,essv6455744,essv5717642,essv5774344,essv5631767,essv6085222,essv5778284,essv5788490,essv6484674,essv6208177,essv5866133,essv5778612,essv5714971,essv6123083,essv5490976,essv5677856,essv6476173,essv6427320,essv6139442,essv5800077,essv6386009,essv6278895,essv6282062,essv5574767,essv6452183,essv6250047,essv6232842,essv6303811,essv5918835,essv6188176,essv5771748,essv5522718,essv5957593,essv5878194,essv6233318,essv6166535,essv5729242,essv6390027,essv5614898,essv5474192,essv5831713,essv5673991,essv5685298,essv5857475,essv6277988,essv5719282,essv5716623,essv5712060,essv5758043,essv5489110,essv6496407,essv6496876,essv5600500,essv6056868,essv6081983,essv5673315,essv5500985,essv5979194,essv5824283,essv6393805,essv5539004,essv5704851,essv6112486,essv5752055,essv6064594,essv6124274,essv6283295,essv6071298,essv5944221,essv5512415,essv5414557,essv5551330,essv5688414,essv5890825,essv5531187,essv5843227,essv5865000,essv5634505,essv5906920,essv5443311,essv5514647,essv5572191,essv6129225,essv6329132,essv6282586,essv6083586,essv6174985,essv5895777,essv5597447,essv6357511,essv5893861,essv6386313,essv5536256,essv5447805,essv5869052,essv5454994,essv5647612,essv5893770,essv6035403,essv5891034,essv6358698,essv5476202,essv5994376,essv5596378,essv6150690,essv5945472,essv5910785,essv6182430,essv5965560,essv5913453,essv6059076,essv6345432,essv5431123,essv5614234,essv5612072,essv6426326,essv5435936,essv6370344,essv6453170,essv5414063,essv5433339,essv5935603,essv5996953,essv6027374,essv5858963,essv5826988,essv6016530,essv6424164,essv5504884,essv6028525,essv5636136,essv5447486,essv5672362,essv5553306,essv5896668,essv5912437,essv6453878,essv6103358,essv6462531,essv5841860,essv5875505,essv6359035,essv6455860,essv5633640,essv6192928,essv5469481,essv6178908,essv5929203,essv6471882,essv5982590,essv6240356,essv6069551,essv6352766,essv5915770,essv5490928,essv6444118,essv5951358,essv6028850,essv5575340,essv6059706,essv6057477,essv5564212,essv5522431,essv6239650,essv5577290,essv6041414,essv6051652,essv5461812,essv6289370,essv6215307,essv5907508,essv6320529,essv5643554,essv6448555,essv5572810,essv5624718,essv5969130,essv5856474,essv6003240,essv5912479,essv5898796,essv5580301,essv5921357,essv5924521,essv6416709,essv6474271,essv5428152,essv6135267,essv5447744,essv5543551,essv5435381,essv6360480,essv6089632,essv5592265,essv5656032,essv6474145,essv5929348,essv5599535,essv5465497,essv6200401,essv6010568,essv6020974,essv6248812,essv5432906,essv6285915,essv6435010,essv6088168,essv5855943,essv5647681,essv5477946,essv5530400,essv5599481,essv6390650,essv6423304,essv6096167,essv6365732,essv6316689,essv6158664,essv5899267,essv5489245,essv6304212,essv6276334,essv6023067,essv6303278,essv6017543,essv6371236,essv6193962,essv5509926,essv6472809,essv5904263,essv6382925,essv6494449,essv6079485,essv6043574,essv5589478,essv5966983,essv5429758,essv5507776,essv6451584,essv5954480,essv6414549,essv5529389,essv5995042,essv6430296,essv5928482,essv5558327,essv5458624 M 1151 0 381 "" HG00137,HG00140,HG00154,HG00159,HG00179,HG00237,HG00249,HG00252,HG00254,HG00258,HG00271,HG00285,HG00313,HG00335,HG00345,HG00373,HG00421,HG00436,HG00437,HG00442,HG00448,HG00449,HG00472,HG00475,HG00476,HG00478,HG00479,HG00512,HG00524,HG00525,HG00531,HG00533,HG00534,HG00542,HG00543,HG00557,HG00566,HG00583,HG00590,HG00608,HG00610,HG00625,HG00628,HG00629,HG00654,HG00662,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00699,HG00705,HG00707,HG00708,HG00732,HG00734,HG00736,HG01069,HG01075,HG01079,HG01083,HG01101,HG01108,HG01167,HG01170,HG01190,HG01204,HG01254,HG01334,HG01350,HG01351,HG01354,HG01357,HG01360,HG01366,HG01374,HG01378,HG01384,HG01465,HG01488,HG01491,HG01515,NA06986,NA06994,NA07048,NA07347,NA11829,NA11830,NA11831,NA11894,NA11918,NA11920,NA11933,NA11994,NA12043,NA12155,NA12249,NA12282,NA12287,NA12348,NA12383,NA12414,NA12489,NA12716,NA12717,NA12750,NA12761,NA12776,NA12813,NA12827,NA12878,NA12891,NA18488,NA18498,NA18502,NA18504,NA18505,NA18508,NA18510,NA18516,NA18517,NA18520,NA18523,NA18526,NA18530,NA18532,NA18534,NA18537,NA18539,NA18541,NA18542,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18555,NA18557,NA18558,NA18559,NA18560,NA18561,NA18562,NA18563,NA18564,NA18566,NA18572,NA18573,NA18574,NA18577,NA18579,NA18582,NA18592,NA18596,NA18597,NA18599,NA18603,NA18605,NA18606,NA18608,NA18609,NA18611,NA18612,NA18613,NA18614,NA18615,NA18617,NA18618,NA18619,NA18621,NA18622,NA18623,NA18627,NA18630,NA18632,NA18634,NA18853,NA18856,NA18858,NA18861,NA18868,NA18870,NA18907,NA18909,NA18910,NA18916,NA18917,NA18924,NA18940,NA18941,NA18942,NA18944,NA18945,NA18947,NA18951,NA18953,NA18960,NA18961,NA18964,NA18965,NA18967,NA18968,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18981,NA18982,NA18985,NA18986,NA18987,NA18990,NA18991,NA19005,NA19010,NA19054,NA19055,NA19065,NA19066,NA19072,NA19098,NA19099,NA19102,NA19107,NA19108,NA19114,NA19119,NA19129,NA19130,NA19131,NA19138,NA19144,NA19147,NA19152,NA19153,NA19159,NA19160,NA19171,NA19172,NA19189,NA19190,NA19197,NA19198,NA19200,NA19201,NA19204,NA19207,NA19209,NA19210,NA19223,NA19236,NA19238,NA19239,NA19240,NA19257,NA19311,NA19312,NA19313,NA19316,NA19318,NA19319,NA19321,NA19327,NA19328,NA19331,NA19332,NA19334,NA19338,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19401,NA19403,NA19404,NA19428,NA19429,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19455,NA19457,NA19461,NA19466,NA19467,NA19468,NA19469,NA19471,NA19472,NA19473,NA19474,NA19625,NA19654,NA19663,NA19670,NA19700,NA19701,NA19703,NA19704,NA19711,NA19712,NA19713,NA19716,NA19720,NA19722,NA19726,NA19732,NA19747,NA19776,NA19779,NA19780,NA19782,NA19818,NA19834,NA19835,NA19909,NA19914,NA19917,NA19920,NA19982,NA19985,NA20127,NA20276,NA20282,NA20287,NA20291,NA20317,NA20356,NA20507,NA20525,NA20529,NA20534,NA20536,NA20537,NA20585,NA20756,NA20765,NA20774,NA20796 nsv951958 1 3000037 3040736 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2998367 M 1 0 1 "" BILGI_BIOE esv2667684 1 3002108 3003391 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6361039 M 1151 0 1 "" HG01124 esv2670784 1 3002467 3002802 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5946869,essv6231333,essv5948208,essv6108901,essv5605448,essv5753674,essv6467509,essv6395209,essv5749032,essv5768297,essv6013512,essv5543768,essv5608294,essv6446882,essv5757246,essv5707701,essv5699689,essv5813093,essv5466216,essv5609848,essv5688894,essv5767237,essv5676796,essv6183062,essv6473788,essv5451855,essv5802399,essv5845033,essv5776747,essv6488384,essv5968624,essv6319932,essv5749338,essv5838156,essv6246125,essv6097660,essv6525071,essv6092954,essv6090818,essv6192468,essv5422458,essv6530854,essv6006306,essv6290344,essv5805781,essv6200508,essv6255770,essv6461755,essv5695235,essv5832535,essv6010515,essv6582473,essv6522160,essv5718031,essv5725435,essv5695368,essv5404440,essv6320765,essv6567166,essv6300416,essv5756825,essv6441578,essv6356611,essv6252438,essv5888783,essv5729104,essv6504886,essv6216524,essv5658732,essv5683127,essv5402798,essv5676123,essv6588504,essv5707531,essv5656248,essv6544689,essv5743002,essv5593902,essv5573415,essv5815156,essv6221677,essv6286225,essv5485071,essv5843000,essv6578743,essv5670266,essv5880202,essv6287272,essv6197085,essv5455553,essv6072478,essv6097296,essv5504364,essv6287300,essv6473198,essv5626515,essv6333025,essv6383875,essv5397498,essv6478079,essv5645942,essv5396024,essv6406995,essv6465566,essv5941668,essv5513115,essv5500108,essv6077957,essv6248609,essv6298250,essv5438938,essv5980229,essv6229658,essv5919493,essv5489446,essv6125588,essv5984772,essv6545117,essv6429478,essv6213795,essv5602371,essv6527558,essv6293425,essv5938283,essv6251529,essv6098192,essv5431264,essv5950451,essv6175610,essv5502367,essv6463619,essv5910984,essv5475936,essv5552976,essv5625343,essv6311507,essv6392009,essv6149007,essv6022989,essv5588588,essv5436797,essv5884558,essv5411894,essv6509575,essv5882249,essv5865350,essv6191912,essv6391995,essv5516011,essv6408277,essv6057669,essv6272950,essv5994927,essv6378956,essv6502250,essv6071774,essv6496957,essv5430982,essv6046184 M 1151 0 159 "" HG00098,HG00122,HG00137,HG00140,HG00148,HG00154,HG00159,HG00187,HG00237,HG00249,HG00252,HG00254,HG00285,HG00313,HG00335,HG00345,HG00361,HG00373,HG00421,HG00442,HG00476,HG00478,HG00512,HG00524,HG00525,HG00531,HG00533,HG00542,HG00557,HG00560,HG00592,HG00608,HG00611,HG00662,HG00671,HG00672,HG00683,HG00684,HG00689,HG00692,HG00707,HG00708,HG01079,HG01083,HG01101,HG01112,HG01188,HG01204,HG01334,HG01351,HG01354,HG01357,HG01365,HG01366,HG01378,HG01488,HG01497,NA06986,NA11894,NA11918,NA11920,NA11933,NA12043,NA12046,NA12155,NA12249,NA12282,NA12348,NA12383,NA12489,NA12716,NA12750,NA12827,NA12878,NA12891,NA18532,NA18534,NA18537,NA18541,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18552,NA18555,NA18557,NA18560,NA18563,NA18564,NA18572,NA18573,NA18579,NA18597,NA18605,NA18606,NA18608,NA18609,NA18611,NA18612,NA18617,NA18619,NA18621,NA18622,NA18623,NA18624,NA18627,NA18628,NA18630,NA18632,NA18940,NA18943,NA18945,NA18947,NA18951,NA18953,NA18959,NA18964,NA18973,NA18983,NA18984,NA18986,NA19009,NA19057,NA19063,NA19065,NA19066,NA19072,NA19075,NA19080,NA19654,NA19663,NA19664,NA19720,NA19726,NA19731,NA19732,NA19746,NA19759,NA19771,NA19776,NA19779,NA19782,NA19783,NA19788,NA19914,NA20507,NA20525,NA20529,NA20537,NA20585,NA20756,NA20765,NA20771,NA20772,NA20786,NA20796 nsv829759 1 3006585 3094573 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1450850,nssv1450961 M 95 0 2 "" nsv545098 1 3009815 3089567 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708766 M 17421 0 1 "" esv1972331 1 3016269 3016671 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4751842 M 1 0 1 "" NA18507 esv2667710 1 3016412 3016561 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6540364,essv5410465,essv6542912,essv6046485,essv6571961,essv6398348,essv6538483,essv5688099,essv5870910,essv5804538,essv5581092,essv6075789,essv5795985,essv6187649,essv5783089,essv6112223,essv5786327,essv6031525,essv6360948,essv5873465,essv6371418,essv5869163,essv6104804,essv6207197,essv5398100,essv5438563,essv6311064,essv6092048,essv5564448,essv5519747,essv6212539,essv6369709,essv6038826,essv6400467,essv5431062,essv6174015,essv6366811,essv5500314,essv5663561 M 1151 0 39 "" HG00442,HG00449,HG00513,HG00581,HG00683,HG00699,HG01334,HG01350,HG01366,HG01498,NA12827,NA18505,NA18526,NA18545,NA18546,NA18559,NA18566,NA18570,NA18573,NA18605,NA18606,NA18611,NA18612,NA18621,NA18622,NA19114,NA19138,NA19190,NA19225,NA19374,NA19382,NA19383,NA19391,NA19395,NA20278,NA20281,NA20299,NA20341,NA20356 esv2494725 1 3025571 3026560 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5336919 M 1 1 0 "" NA18507 esv3415692 1 3025628 3026726 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692284 M 185 1 0 "" NA19240 nsv160478 1 3042703 3042703 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179056 M 24 "" nsv951959 1 3051037 3812036 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2999006 M 1 0 1 "" BILGI_BIOE nsv824697 1 3059293 3078148 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426367 M 31 1 0 "" AK6 nsv545099 1 3077074 3139312 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172587 M 17421 0 1 "" 1780862275_A esv3363327 1 3136888 3136888 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824118 M 185 1 0 "" NA12878 nsv457884 1 3145797 3188066 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv534983 M 1557 0 1 "" HGDP01234 nsv545100 1 3145797 3188066 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172588 M 17421 0 1 "" HGDP01234 esv2664338 1 3146432 3146915 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6381855 M 1151 0 1 "" NA12287 esv2676112 1 3146467 3146784 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6514533,essv5787724,essv5787793,essv5572598,essv5955277,essv5839364,essv6446228,essv6197856 M 1151 0 8 "" HG01441,NA11843,NA19172,NA19189,NA19443,NA19453,NA19470,NA20797 esv2665020 1 3146919 3147039 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6558192,essv5723740,essv6442376,essv5599691,essv6163417,essv5787323,essv6234778,essv6030097,essv5812738,essv5502467,essv5507240,essv5559955,essv6022081,essv6116403,essv6173071,essv5580727,essv5541041,essv6159727,essv5403763,essv6165957,essv5458481 M 1151 0 21 "" HG00327,HG00335,HG00473,HG00531,HG00581,HG00583,HG00607,HG00654,HG00657,HG00662,HG00683,HG00702,HG00705,NA18547,NA18562,NA18595,NA18610,NA18611,NA18623,NA18949,NA19002 esv3382615 1 3162728 3163426 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692291 M 185 1 0 "" NA19239 esv22935 1 3165143 3166242 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20220 M 40 5 0 "" NA07037,NA12004,NA12828,NA18523,NA19240 esv2662377 1 3165487 3165835 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6356412,essv5649876,essv6508168,essv6172207,essv6521146,essv6082472,essv6395125,essv5703019,essv6274084,essv5779366,essv6391630,essv5752439,essv6568601,essv5806442,essv6506679,essv5730609,essv6373808,essv5501467,essv6286208,essv6163803,essv6584466,essv6153613,essv6538462,essv5850489,essv6588994,essv5731192,essv6448046,essv5812292,essv6337398,essv5896676,essv6422607,essv5987147,essv6337981,essv5783985,essv6387702,essv5841234,essv6461104,essv6193640,essv6292284,essv5675554,essv6298081,essv5774820,essv6542459,essv5678624,essv6504564,essv5693036,essv6429513,essv5651766,essv6526641,essv5478028,essv6322722,essv6225449,essv6306676,essv5828794,essv5781509,essv5755154,essv5665082,essv5744813,essv6252831,essv5542135,essv5529709,essv5710521,essv5559838,essv5771735,essv5926559,essv6157596,essv6117538,essv6201697,essv6189458,essv6091377,essv5926716,essv5398800,essv5541246,essv6116683,essv6000764,essv6049657,essv6181202,essv5512908,essv6125869,essv5464148,essv5861509,essv6230481,essv5555654,essv5848289,essv5983683,essv5543393,essv6032443,essv6244611,essv6015486,essv6251044,essv6191098,essv5424731,essv6100803,essv5899828,essv5397932,essv5431659,essv5930357,essv5848025,essv6025286,essv5406361,essv6245572,essv6112108,essv5875036,essv5665526,essv5977786,essv5642389,essv5874746,essv5443857,essv5675793,essv5526373,essv5659194,essv5904917,essv5647864,essv6224723,essv5990786,essv6091505,essv6129654,essv6027703,essv6068129,essv6089295,essv5494452,essv5943685,essv6249623,essv5840446,essv5462076,essv6020196,essv5545290 M 1151 0 127 "" HG00111,HG00123,HG00124,HG00125,HG00150,HG00151,HG00154,HG00159,HG00249,HG00250,HG00251,HG00256,HG00276,HG00277,HG00309,HG00310,HG00315,HG00318,HG00321,HG00324,HG00330,HG00331,HG00334,HG00337,HG00338,HG00342,HG00344,HG00346,HG00369,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00463,HG00464,HG00478,HG00500,HG00513,HG00533,HG00534,HG00543,HG00557,HG00580,HG00581,HG00584,HG00590,HG00607,HG00619,HG00620,HG00650,HG00651,HG00653,HG00656,HG00672,HG00690,HG00699,HG00701,HG00702,HG00705,HG00707,HG00708,HG00734,HG01060,HG01067,HG01069,HG01072,HG01073,HG01079,HG01080,HG01101,HG01107,HG01124,HG01125,HG01136,HG01170,HG01183,HG01204,HG01334,HG01350,HG01351,HG01365,HG01374,HG01375,HG01389,HG01462,HG01498,NA07051,NA07056,NA12043,NA12058,NA18519,NA18530,NA18534,NA18536,NA18542,NA18543,NA18544,NA18546,NA18548,NA18549,NA18558,NA18559,NA18574,NA18595,NA18596,NA18597,NA18599,NA18606,NA18612,NA18619,NA18620,NA18621,NA18635,NA18637,NA18910,NA18990,NA19312,NA19436,NA19463,NA19657,NA19720,NA19834,NA20510 nsv458995 1 3167148 3197116 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv535843 M 1557 0 1 "" HGDP00814 esv25107 1 3167388 3168323 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv12712 M 40 1 0 "" NA12156 dgv52n54 1 3167416 3169932 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545101,nsv545112 M 17421 0 2 "" nsv545102 1 3167468 3168255 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708768 M 17421 1 0 "" dgv53n54 1 3167468 3169900 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545106,nsv545103,nsv545111 M 17421 7 0 "" dgv54n54 1 3167521 3168152 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545107,nsv545104,nsv545108,nsv545118,nsv545114,nsv545115,nsv545109 M 17421 0 16 "" dgv55n54 1 3167521 3168255 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545105,nsv545119 M 17421 0 5 "" dgv56n54 1 3167572 3168255 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545116,nsv545110 M 17421 19 15 "" nsv545113 1 3167623 3167778 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708801 M 17421 0 1 "" nsv545117 1 3167623 3169900 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708833,nssv708829,nssv708834,nssv708828,nssv708830,nssv708832,nssv708831 M 17421 5 2 "" esv1279453 1 3167970 3168206 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3971964 M 2 0 1 "" HuRef esv1001450 1 3180834 3182039 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586288 M 3 0 1 "" HuRef esv26942 1 3180899 3182239 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18850 M 40 6 0 "" NA11931,NA12004,NA12006,NA12287,NA12776,NA15510 esv2447933 1 3181346 3181407 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5170486 M 1 0 1 "" NA18507 nsv954327 1 3181424 3181539 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000551 M 1 0 1 "" BILGI_BIOE nsv160334 1 3181451 3181451 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178912 M 24 "" esv2657185 1 3181782 3181991 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6411772,essv5517489,essv6266510,essv5983257,essv6581950,essv5934042,essv6252553,essv5909746,essv6377654,essv5485848,essv6115199,essv6063420,essv6456899,essv5866769,essv6595667,essv5731107,essv6153612,essv5955537,essv6287528,essv6001097,essv6564065,essv5800105,essv6481659,essv5497188,essv6160385,essv6041890,essv6384544,essv5821976,essv6303026,essv5433508,essv6194040,essv5808855,essv6176643,essv5748316,essv6144611,essv5682351,essv6201420,essv5795763,essv6398079,essv5625710,essv6184856,essv5530266,essv6353649,essv5688988,essv6307286,essv5818384,essv6406267,essv5972060,essv6320415,essv5743893,essv6262356,essv5760161,essv6303091,essv5809740,essv6183646,essv6010567,essv6276811,essv5705542,essv6211074,essv5608004,essv6519644,essv5716770,essv6589562,essv5960012,essv6377465,essv6029226,essv6130985,essv6016917,essv6421513,essv5494361,essv6203728,essv5708029,essv6383401,essv5817653,essv6179293,essv5813682,essv6102864,essv5468949,essv6143427,essv5788001,essv6209918,essv5717895,essv6155625,essv6089536,essv6149953,essv6090124,essv6147693,essv5527601,essv6257623,essv5576937,essv6292746,essv5676195,essv6483158,essv5838530,essv6107795,essv5767879,essv6519104,essv5443094,essv6514978,essv5922822,essv6292795,essv5976114,essv6382914,essv5489336,essv6371866,essv5632080,essv6174391,essv5929347,essv6156345,essv5538615,essv6384175,essv5759878,essv6413614,essv5938465,essv6267594,essv5902078,essv6450394,essv5634582,essv6125472,essv5512162,essv6367521,essv5587160,essv5635263,essv5408262,essv5977768,essv5509902,essv5575901,essv5553972,essv5897468,essv5651570,essv5880948,essv5433823,essv5649474,essv5912654,essv6034438,essv5976471,essv5477444,essv5606857,essv5561632,essv5596195,essv6085530,essv5599375,essv6031175,essv5573588,essv5437567,essv5951367,essv5960808,essv6039583,essv6028664,essv5598397,essv5920614,essv5630755,essv5880601,essv5670385,essv5493343,essv5632713,essv5836212,essv5641195,essv5591039,essv6063549,essv5918341,essv5652322 M 1151 0 162 "" HG00098,HG00111,HG00115,HG00124,HG00151,HG00152,HG00154,HG00159,HG00188,HG00249,HG00250,HG00264,HG00265,HG00272,HG00276,HG00277,HG00281,HG00308,HG00310,HG00311,HG00312,HG00313,HG00337,HG00338,HG00342,HG00344,HG00346,HG00357,HG00369,HG00380,HG00418,HG00428,HG00437,HG00463,HG00464,HG00533,HG00577,HG00580,HG00590,HG00593,HG00619,HG00625,HG00637,HG00651,HG00690,HG00693,HG00699,HG00705,HG00734,HG00736,HG00737,HG00739,HG01052,HG01060,HG01069,HG01070,HG01072,HG01073,HG01079,HG01080,HG01107,HG01124,HG01136,HG01137,HG01171,HG01190,HG01191,HG01251,HG01253,HG01334,HG01353,HG01357,HG01359,HG01360,HG01374,HG01383,HG01384,HG01390,HG01441,HG01462,HG01489,HG01516,HG01521,NA07051,NA07056,NA11992,NA12058,NA12155,NA12341,NA12347,NA12399,NA18487,NA18507,NA18530,NA18541,NA18542,NA18550,NA18570,NA18574,NA18582,NA18597,NA18606,NA18612,NA18619,NA18620,NA18638,NA18868,NA18933,NA18963,NA18977,NA18986,NA18999,NA19055,NA19065,NA19074,NA19080,NA19088,NA19198,NA19225,NA19235,NA19312,NA19316,NA19317,NA19373,NA19374,NA19381,NA19396,NA19404,NA19435,NA19436,NA19437,NA19438,NA19451,NA19461,NA19463,NA19660,NA19670,NA19675,NA19685,NA19713,NA19720,NA19749,NA19758,NA19759,NA19761,NA19776,NA19783,NA19785,NA19917,NA19985,NA20294,NA20317,NA20341,NA20513,NA20529,NA20540,NA20588,NA20758,NA20802,NA20803,NA20805,NA20809 nsv545120 1 3195184 3221547 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708840 M 17421 0 1 "" nsv829870 1 3210241 3339524 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1451294,nssv1451405,nssv1451072,nssv1451183 M 95 0 4 "" esv3384045 1 3213788 3213807 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678397 M 185 1 0 "" NA19240 nsv527875 1 3228181 3292266 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704374 M 2026 0 1 "" nsv829981 1 3236028 3417252 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441618,nssv1441607,nssv1441630,nssv1441641,nssv1441652,nssv1441663,nssv1441674,nssv1441685,nssv1441519,nssv1441541,nssv1441530,nssv1441552,nssv1441563,nssv1441596,nssv1441574,nssv1441585 M 95 0 16 "" esv2639320 1 3260501 3261145 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5229663 M 1 1 0 "" NA18507 nsv545121 1 3271745 3286557 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708841 M 17421 0 1 "" dgv6n67 1 3293294 3294764 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv824808,nsv824919 M 31 0 2 "" AK14,NA18552 esv2670143 1 3293385 3295583 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6527111,essv6405701,essv6330380,essv6423827,essv6215077,essv6317073 M 1151 0 6 "" HG00418,HG00427,HG00581,HG00592,NA18552,NA19003 nsv7645 1 3297543 3332623 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4419 M 9 1 0 "" NA12878 nsv161030 1 3298001 3298001 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179608 M 24 "" esv2582992 1 3298649 3300731 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5311128 M 1 0 1 "" NA18507 esv2000244 1 3298967 3299892 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4511826 M 1 0 1 "" NA18507 nsv511673 1 3299043 3301124 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626311 M 1 0 1 "" 1 esv1917341 1 3299055 3299652 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4748244 M 1 0 1 "" NA18507 esv22281 1 3299096 3300546 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11880 M 40 0 11 "" NA11894,NA12004,NA12006,NA12044,NA12489,NA12878,NA15510,NA18502,NA18511,NA18861,NA19240 nsv545122 1 3299553 3300455 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708842 M 17421 0 1 "" nsv830092 1 3301382 3466809 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441696,nssv1441718,nssv1441707,nssv1441729,nssv1441741,nssv1441752,nssv1441763,nssv1441774,nssv1441785,nssv1441796,nssv1441807,nssv1441818,nssv1441829,nssv1441840 M 95 1 13 "" nsv522146 1 3310624 3312351 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694919 M 2026 0 1 "" esv2662201 1 3321503 3321965 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6400750,essv5620017,essv6524346,essv5802014,essv6282849,essv5750981,essv6540045,essv5413984,essv6377111,essv6133019,essv6487762,essv5602859,essv6282709,essv5684629,essv5723965,essv6201031,essv5904874,essv6010527,essv5556253,essv6117936,essv5798711,essv5610976,essv5718955,essv6147593,essv6172970,essv5677945,essv6093751,essv5797750,essv5692928,essv5764376,essv5823120,essv6010041,essv6127966,essv5840751,essv5513919,essv5907889,essv6193777,essv6156319,essv5579548,essv6229789,essv5467613,essv5654746,essv6146874,essv5576041,essv5980277,essv5503928,essv6064507 M 1151 0 47 "" HG01094,HG01108,NA18486,NA18488,NA18510,NA18519,NA18520,NA18523,NA18853,NA18874,NA18907,NA18910,NA19092,NA19093,NA19099,NA19108,NA19116,NA19138,NA19313,NA19319,NA19321,NA19359,NA19360,NA19372,NA19373,NA19374,NA19377,NA19382,NA19431,NA19443,NA19455,NA19471,NA19472,NA19649,NA19676,NA19711,NA19818,NA19835,NA19900,NA19904,NA19920,NA20127,NA20287,NA20291,NA20322,NA20346,NA20507 esv998521 1 3326031 3326089 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3584219 M 3 0 1 "" HuRef esv1330141 1 3326045 3326104 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3645168 M 2 0 1 "" HuRef esv3340545 1 3335828 3338226 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692298 M 185 1 0 "" NA19240 esv3347294 1 3336028 3337326 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692299 M 185 1 0 "" NA19239 nsv526836 1 3342549 3342619 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703193 M 2026 0 1 "" nsv512711 1 3351502 3351542 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625335 M 1 1 0 "" 1 nsv470687 1 3356499 3763210 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547684,nssv547679,nssv547677,nssv547674,nssv547682,nssv547686,nssv547685,nssv547683,nssv547675,nssv547676,nssv547681,nssv547680 M 443 0 8 "" HGDP00288,HGDP00298,HGDP00302,HGDP00546,HGDP00550,HGDP00657,HGDP00825,HGDP00978 esv2758915 1 3372374 3632289 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757719 M 270 1 0 "" NA18943 nsv459950 1 3373165 3384566 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536592 M 1557 0 1 "" HGDP00788 nsv545123 1 3373165 3384566 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172589 M 17421 0 1 "" HGDP00788 nsv522900 1 3377101 3378408 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698558 M 2026 0 1 "" nsv524467 1 3391470 3391934 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700403 M 2026 0 1 "" dgv1n21 1 3391470 3398032 CNV gain Shaikh_et_al_2009 19592680 SNP array nsv521921,nsv527139 M 2026 2 0 "" esv3414281 1 3408228 3410326 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692300 M 185 1 0 "" NA19240 esv2658512 1 3408736 3409178 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6185499,essv5570301,essv6515768,essv5416482,essv6153056,essv5707079,essv6342267,essv5492481,essv6556662,essv6062443,essv6554556,essv5825792,essv6562101,essv5827153,essv6295141,essv5694021,essv6537650,essv5825626,essv6360850,essv5680358,essv6300687,essv5461948,essv6180680,essv5753076,essv6226057,essv5751828,essv6145497,essv5827967,essv6161183,essv5761519,essv6238029,essv5962612,essv6576147,essv5488483,essv6421345,essv5922207,essv6189238,essv5711992,essv6436961,essv5683921,essv6468293,essv5561326,essv6415451,essv5415576,essv6472486,essv5965811,essv6207899,essv5514782,essv6521454,essv5608926,essv6239558,essv5931372,essv6472020,essv5442746,essv6426264,essv5990793,essv6349013,essv5546149,essv6396674,essv5544323,essv6371198,essv5457541,essv6168011,essv5473193,essv6293451,essv5405859,essv6229268,essv5512898,essv6140912,essv5875312,essv6430636,essv5612429,essv6375990,essv6065680,essv6497657,essv5640915,essv6286815,essv5428889,essv6205377,essv5906030,essv6432957,essv5987102,essv6579467,essv6111677,essv5793609,essv5536391,essv6101588,essv5895839,essv5912664,essv5981317 M 1151 0 90 "" HG00123,HG00133,HG00342,HG00437,HG01170,HG01204,NA07051,NA11892,NA11893,NA11930,NA11932,NA12340,NA12348,NA12546,NA12778,NA12827,NA12830,NA12842,NA12889,NA18486,NA18499,NA18522,NA18545,NA18548,NA18553,NA18570,NA18595,NA18597,NA18602,NA18606,NA18853,NA18908,NA18912,NA18947,NA18950,NA18956,NA18973,NA19078,NA19107,NA19247,NA19248,NA19313,NA19332,NA19334,NA19350,NA19446,NA19471,NA19473,NA19652,NA19682,NA19684,NA19700,NA19713,NA19789,NA19818,NA19920,NA20507,NA20513,NA20514,NA20521,NA20522,NA20525,NA20526,NA20533,NA20537,NA20581,NA20585,NA20760,NA20761,NA20771,NA20778,NA20783,NA20785,NA20786,NA20787,NA20790,NA20792,NA20795,NA20798,NA20799,NA20801,NA20803,NA20805,NA20806,NA20809,NA20811,NA20812,NA20816,NA20819,NA20828 esv3347804 1 3409528 3410226 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692301 M 185 1 0 "" NA19239 esv1000452 1 3417831 3423402 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565499 M 3 0 1 "" HuRef esv4712 1 3433389 3433701 CNV loss Wang_et_al_2008 18987735 Sequencing essv27153 M 1 0 1 "" YH nsv830203 1 3446374 3607752 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1441852,nssv1441863 M 95 0 2 "" nsv160351 1 3450455 3450455 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178929 M 24 "" nsv545124 1 3451579 3488732 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708843 M 17421 0 1 "" nsv475972 1 3463618 3463618 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013178 M 9 1 0 "" NA12878 nsv476024 1 3466491 3466491 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013501 M 9 1 0 "" NA12878 esv1571906 1 3475081 3475141 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4030830 M 2 0 1 "" HuRef nsv299 1 3476928 3512705 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4678,nssv4519,nssv9111 M 9 3 0 "" NA12156,NA12878,NA19129 esv3355688 1 3477099 3477344 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652084 M 185 1 0 "" NA19240 esv3449417 1 3477247 3477308 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808964 M 185 1 0 "" NA12878 esv3368997 1 3484499 3484499 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8825207 M 185 1 0 "" NA19240 dgv7n67 1 3484509 3489098 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825031,nsv825142,nsv825364 M 31 3 0 "" NA18542,NA18951,NA18973 nsv825253 1 3484509 3489360 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434860 M 31 0 1 "" NA18942 nsv545125 1 3490443 3540731 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708844 M 17421 0 1 "" esv3417230 1 3501733 3502311 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808966 M 185 1 0 "" NA12878 esv2862902 1 3501990 3502104 CNV duplication Pang_et_al_2013b 24192839 Sequencing essv7132469 M 1 1 0 "" HuRef esv3352832 1 3502040 3502128 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652085 M 185 1 0 "" NA19240 esv1595391 1 3502049 3502049 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3895480 M 2 1 0 "" HuRef nsv818333 1 3524700 3540307 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417807 M 112 0 1 "" NA18853 nsv10494 1 3529570 3535392 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv21444,nssv21442 M 31 0 2 "" NA18942,NA18975 nsv519082 1 3539193 3540028 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv696553 M 2026 1 0 "" nsv545126 1 3539193 3582682 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708845 M 17421 0 1 "" nsv474159 1 3556825 3556825 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014646 M 9 1 0 "" NA18507 nsv545127 1 3563585 3582682 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708846 M 17421 0 1 "" nsv818444 1 3570562 3594069 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417551 M 112 0 1 "" NA18971 esv1003247 1 3578744 3578744 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570647 M 3 1 0 "" HuRef esv1491138 1 3578765 3578765 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3621012 M 2 1 0 "" HuRef esv2470115 1 3582828 3586208 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5366115 M 1 0 1 "" NA18507 esv28730 1 3583168 3584067 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13258 M 40 0 3 "" NA12489,NA18861,NA18916 esv1062679 1 3583463 3583535 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4165604 M 2 0 1 "" HuRef esv2672292 1 3585114 3585593 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6292374,essv6420111,essv5820942,essv5553326,essv5787617,essv5416542,essv5907773,essv6141781 M 1151 0 8 "" HG00442,HG00512,NA18545,NA18632,NA18956,NA18973,NA18987,NA19130 esv3413189 1 3585228 3586526 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692303 M 185 1 0 "" NA19240 esv1072885 1 3587882 3587882 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4183764 M 2 1 0 "" HuRef nsv160325 1 3587883 3587883 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178903 M 24 "" nsv160986 1 3591625 3591690 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179564 M 24 "" nsv160621 1 3591647 3591712 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179199 M 24 "" esv1645766 1 3591856 3591922 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4161797 M 2 0 1 "" HuRef dgv26e59 1 3604528 3605826 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3363109,esv3391335 M 185 2 0 "" NA19239,NA19240 nsv545128 1 3630371 3700037 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708847 M 17421 0 1 "" nsv410 1 3635087 3667080 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10069 M 9 1 0 "" NA18956 esv2247294 1 3640280 3640753 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4665883 M 1 0 1 "" NA18507 esv2489412 1 3643172 3644834 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5381740 M 1 0 1 "" NA18507 esv29463 1 3643681 3644391 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11696 M 40 0 1 "" NA15510 esv2853680 1 3643693 3644407 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123247 M 1 0 1 "" HuRef esv1007908 1 3643883 3644392 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571323 M 3 0 1 "" HuRef nsv830314 1 3660776 3804275 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1441907,nssv1441918,nssv1441940,nssv1441929,nssv1441951,nssv1441963,nssv1441974,nssv1441985,nssv1441996,nssv1441885,nssv1441874,nssv1441896 M 95 1 11 "" esv2758916 1 3668477 3738972 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756833 M 270 1 0 "" NA10855 nsv460061 1 3680453 3755227 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536686 M 1557 0 1 "" HGDP00787 nsv545129 1 3680453 3755227 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172590 M 17421 0 1 "" HGDP00787 dgv27e59 1 3693628 3695026 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3382922,esv3432428 M 185 1 0 "" NA19240 esv1394802 1 3693782 3693782 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4024850 M 2 1 0 "" HuRef esv3378361 1 3694028 3695026 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692311 M 185 1 0 "" NA19238 esv1032022 1 3694118 3694118 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3640841 M 2 1 0 "" HuRef esv1115862 1 3694263 3694263 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4358577 M 2 1 0 "" HuRef esv1634361 1 3694335 3694755 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3887450 M 2 0 1 "" HuRef esv994567 1 3735559 3738806 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565096 M 3 0 1 "" HuRef nsv830425 1 3740889 3841825 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442007 M 95 1 0 "" nsv478669 1 3741767 3741767 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012836 M 9 1 0 "" NA18507 esv2677777 1 3750065 3751869 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5908521 M 1151 0 1 "" NA19390 esv2659590 1 3753973 3755043 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6182763,essv5770360,essv6358993,essv5786877,essv6424233,essv5470080,essv6060763 M 1151 0 7 "" NA18501,NA18853,NA18910,NA19373,NA19381,NA19397,NA19473 esv1678500 1 3797725 3797725 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4118454 M 2 1 0 "" HuRef esv1763700 1 3800377 3800527 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4015442 M 2 0 1 "" HuRef dgv6e199 1 3800389 3800589 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2676394,esv2663574 M 1151 0 81 "" HG00108,HG00111,HG00125,HG00136,HG00140,HG00142,HG00151,HG00154,HG00232,HG00253,HG00261,HG00268,HG00275,HG00280,HG00284,HG00285,HG00309,HG00310,HG00318,HG00320,HG00324,HG00326,HG00331,HG00334,HG00337,HG00346,HG00436,HG00501,HG00524,HG00589,HG00590,HG00657,HG00662,HG00692,HG00740,HG01048,HG01051,HG01067,HG01073,HG01108,HG01125,HG01173,HG01187,HG01350,HG01353,HG01365,HG01374,HG01437,HG01440,NA07347,NA11918,NA12006,NA12830,NA18511,NA18517,NA18595,NA18623,NA18861,NA18953,NA19114,NA19138,NA19147,NA19172,NA19359,NA19371,NA19374,NA19375,NA19379,NA19381,NA19385,NA19390,NA19391,NA19394,NA19397,NA19439,NA20294,NA20332,NA20502,NA20507,NA20527,NA20528 nsv509590 1 3826457 3902492 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623769 M 4 1 0 "" NA18994 nsv545130 1 3826568 4283888 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172591 M 17421 1 0 "" 1780862339_A esv1948239 1 3832307 3832651 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4952306 M 1 0 1 "" NA18507 esv1074506 1 3832433 3832433 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3942170 M 2 1 0 "" HuRef nsv159844 1 3843341 3844698 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178422 M 24 "" nsv479517 1 3866471 3866471 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012022 M 9 0 0 "" esv1467252 1 3868672 3868672 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4229403 M 2 1 0 "" HuRef nsv480404 1 3868931 3868931 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011405 M 9 0 0 "" nsv473755 1 3870552 3870552 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017508 M 9 1 0 "" NA12156 nsv479682 1 3870643 3870643 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012592 M 9 0 0 "" esv1008825 1 3874263 3874419 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3580646 M 3 0 1 "" HuRef esv1273516 1 3874263 3874420 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4131794 M 2 0 1 "" HuRef esv992605 1 3874263 3874497 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3585949 M 3 0 1 "" HuRef nsv480762 1 3874641 3874641 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012639 M 9 0 0 "" nsv476313 1 3874651 3874651 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014524 M 9 1 0 "" NA12878 nsv481045 1 3876438 3876438 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011297 M 9 0 0 "" nsv474298 1 3877121 3877121 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020439 M 9 1 0 "" NA18507 nsv480565 1 3877848 3877848 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012547 M 9 0 0 "" nsv480530 1 3878085 3878085 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014312 M 9 0 0 "" nsv474895 1 3878429 3878429 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014698 M 9 1 0 "" NA18956 nsv480658 1 3880492 3880492 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012832 M 9 0 0 "" nsv472199 1 3880538 3880538 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016248 M 9 1 0 "" NA18555 nsv480877 1 3882055 3882055 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015174 M 9 0 0 "" nsv480517 1 3883155 3883155 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011682 M 9 0 0 "" nsv480775 1 3883404 3883404 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015333 M 9 0 0 "" nsv480683 1 3886858 3886858 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014297 M 9 0 0 "" nsv474247 1 3888939 3888939 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015360 M 9 1 0 "" NA18507 nsv474199 1 3889953 3889953 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017129 M 9 1 0 "" NA18507 esv26417 1 3891873 3892638 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16927 M 40 2 0 "" NA19099,NA19225 esv1352346 1 3892420 3892512 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4067715 M 2 0 1 "" HuRef nsv460172 1 3954031 4020720 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536774 M 1557 0 1 "" HGDP00586 nsv545131 1 3954031 4020720 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172592 M 17421 0 1 "" HGDP00586 nsv479376 1 3965229 3965229 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017501 M 9 0 0 "" nsv481575 1 3968286 3968286 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018750 M 9 0 0 "" nsv521 1 3983804 3987973 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1327 M 9 1 0 "" NA19240 esv26736 1 3984696 3985204 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11152 M 40 0 1 "" NA18916 esv3332307 1 3999754 3999937 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652088 M 185 1 0 "" NA19240 esv1003004 1 3999767 3999884 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578431 M 3 0 1 "" HuRef esv1647727 1 3999775 3999893 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3880229 M 2 0 1 "" HuRef nsv159163 1 3999776 3999893 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177741 M 24 "" nsv545132 1 4057178 4064597 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708848 M 17421 0 1 "" nsv460283 1 4057494 4239667 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536884 M 1557 0 1 "" HGDP00817 nsv545133 1 4057494 4239667 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172593 M 17421 0 1 "" HGDP00817 nsv520675 1 4060251 4063039 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697551 M 2026 0 1 "" nsv952035 1 4060441 4067640 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2999228 M 1 0 1 "" BILGI_BIOE esv2674556 1 4063485 4067832 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6498795,essv6405492,essv5398297,essv6417603 M 1151 0 4 "" HG01515,HG01516,HG01519,HG01522 esv21720 1 4063783 4067908 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12064 M 40 0 3 "" NA12749,NA12878,NA19108 nsv545134 1 4063789 4067462 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708849 M 17421 0 1 "" dgv57n54 1 4064095 4068463 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545135,nsv545136 M 17421 2 0 "" esv5203 1 4064484 4064938 CNV loss Wang_et_al_2008 18987735 Sequencing essv27644 M 1 0 1 "" YH nsv511674 1 4065182 4065879 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626312 M 1 0 1 "" 1 esv1280652 1 4065275 4065372 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3810874 M 2 0 1 "" HuRef dgv28e59 1 4065632 4067730 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3387532,esv3352978 M 185 2 0 "" NA19239,NA19240 esv5764 1 4065723 4067359 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28205 M 1 0 0 "" dgv7e199 1 4065919 4066889 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2669579,esv2669964 M 1151 0 156 "" HG00111,HG00116,HG00117,HG00119,HG00120,HG00124,HG00145,HG00154,HG00159,HG00190,HG00245,HG00253,HG00258,HG00264,HG00265,HG00280,HG00284,HG00285,HG00306,HG00310,HG00313,HG00325,HG00367,HG00427,HG00436,HG00472,HG00500,HG00501,HG00524,HG00534,HG00536,HG00542,HG00590,HG00683,HG00702,HG00705,HG00707,HG00732,HG01047,HG01055,HG01070,HG01095,HG01168,HG01173,HG01187,HG01198,HG01342,HG01351,HG01353,HG01359,HG01374,HG01440,HG01456,HG01465,HG01494,HG01519,NA06984,NA06989,NA07048,NA11830,NA11831,NA11994,NA12003,NA12154,NA12155,NA12341,NA12342,NA12347,NA12348,NA12400,NA18487,NA18489,NA18533,NA18541,NA18542,NA18559,NA18560,NA18561,NA18565,NA18595,NA18620,NA18625,NA18856,NA18867,NA18874,NA18908,NA18942,NA18950,NA18952,NA18964,NA18977,NA18988,NA18999,NA19004,NA19005,NA19060,NA19065,NA19066,NA19067,NA19068,NA19092,NA19172,NA19189,NA19213,NA19235,NA19331,NA19347,NA19350,NA19355,NA19372,NA19393,NA19440,NA19461,NA19471,NA19651,NA19654,NA19655,NA19658,NA19681,NA19682,NA19684,NA19701,NA19713,NA19725,NA19729,NA19731,NA19747,NA19771,NA19777,NA19779,NA19780,NA19783,NA19835,NA19900,NA19901,NA19904,NA19917,NA19921,NA19982,NA20299,NA20322,NA20340,NA20541,NA20544,NA20582,NA20588,NA20757,NA20769,NA20787,NA20795,NA20800,NA20801,NA20802,NA20810,NA20814,NA20816 esv23365 1 4076933 4078908 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16191,esv13534 M 40 0 13 "" NA12004,NA12006,NA12239,NA12287,NA12489,NA12828,NA18505,NA18858,NA18907,NA18909,NA18916,NA19099,NA19147 esv1000769 1 4077241 4077646 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578155 M 3 0 1 "" HuRef esv1100125 1 4077321 4077727 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3668289 M 2 0 1 "" HuRef nsv821406 1 4077758 4078858 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420735 M 1 1 0 "" NA10851 esv1767486 1 4078501 4078501 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4227901 M 2 1 0 "" HuRef nsv509701 1 4082830 4159840 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619763 M 4 1 0 "" NA10860 esv2637444 1 4094449 4096074 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5194644 M 1 0 1 "" NA18507 esv2259067 1 4094910 4095605 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4563770 M 1 0 1 "" NA18507 esv7346 1 4094935 4095648 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29787 M 1 0 0 "" esv3887 1 4094989 4095524 CNV loss Wang_et_al_2008 18987735 Sequencing essv26328 M 1 0 1 "" YH nsv958832 1 4095081 4095410 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005185 M 1 0 1 "" BILGI_BIOE esv2659809 1 4095086 4095400 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6568831,essv5624570,essv6178006,essv5934874,essv6228892,essv5891577,essv6231357,essv6132364,essv6518642,essv5928753,essv6257016,essv5568383,essv6503444,essv5507771,essv6510565,essv5662498,essv6455508,essv5778315,essv6534190,essv5953199,essv6563655,essv5584652,essv6272544,essv5718527,essv6343669,essv5570050,essv6472934,essv5539881,essv6541439,essv5988594,essv6219195,essv5420359,essv6587724,essv5769818,essv6466324,essv5735011,essv6426524,essv6003735,essv6328172,essv5462741,essv6282481,essv5828050,essv6553473,essv6149254,essv6414749,essv5514413,essv6421277,essv6045932,essv6358413,essv5738061,essv6482512,essv5745115,essv6199654,essv5883312,essv6256649,essv6054367,essv6211677,essv6086340,essv6370681,essv5764782,essv6414649,essv5790800,essv6254490,essv5544662,essv6199612,essv6088301,essv6249042,essv5794764,essv6263061,essv5764796,essv6267344,essv5922256,essv6584811,essv5779445,essv6313715,essv5759384,essv6371379,essv5700429,essv6243065,essv6000843,essv6593828,essv6148691,essv6268208,essv5416954,essv6213962,essv5754352,essv6395431,essv6004457,essv6237314,essv5779455,essv6176070,essv5709559,essv6225461,essv5924139,essv6568262,essv5510387,essv6227312,essv5763684,essv6490815,essv5795700,essv6174952,essv5766200,essv6485976,essv6123979,essv6448732,essv5613942,essv6543566,essv6134085,essv6385060,essv5811643,essv6535724,essv5814062,essv6285170,essv5695013,essv6316905,essv5527706,essv6431479,essv5625067,essv6329663,essv5657760,essv6213691,essv5787329,essv6339112,essv5530755,essv6445846,essv5467145,essv6409615,essv5738329,essv6337110,essv5468302,essv6207058,essv5669178,essv6433499,essv5958282,essv6329900,essv5878980,essv6376492,essv6092118,essv6301110,essv5718766,essv6524458,essv5436209,essv6315836,essv6001124,essv6484139,essv5814097,essv6472399,essv5851281,essv6534486,essv6168254,essv6361757,essv6088219,essv6470268,essv5782772,essv6301949,essv5907886,essv6521397,essv6082581,essv6442475,essv5417753,essv6255646,essv5824039,essv6299436,essv6034621,essv6260811,essv5929321,essv6397348,essv6108426,essv6248593,essv5693520,essv6494997,essv6040682,essv6579998,essv5738540,essv6260502,essv6062496,essv6440640,essv5964268,essv6297843,essv5656859,essv6194290,essv5825090,essv6271856,essv5999238,essv6337571,essv5404760,essv6443566,essv5710458,essv6533852,essv5891153,essv6203294,essv5933179,essv6390173,essv5733440,essv6477362,essv5971923,essv6327230,essv6100412,essv6355014,essv5828845,essv6260930,essv5619817,essv6358726,essv5742125,essv6541718,essv5444651,essv6365285,essv5815861,essv6595989,essv5480437,essv6335322,essv5949728,essv6181254,essv5423894,essv6233458,essv5915358,essv6228607,essv5731908,essv6344031,essv5690829,essv6343326,essv5716477,essv6209196,essv5850246,essv6242330,essv5625809,essv6496217,essv5689998,essv6315089,essv5744657,essv6494614,essv5769643,essv6512049,essv6155237,essv6305227,essv5507486,essv6593631,essv5473701,essv6421493,essv5683739,essv6449283,essv5942658,essv6211474,essv5491401,essv6274740,essv5551978,essv6571288,essv5447402,essv6190853,essv5722186,essv6593647,essv5796023,essv6265616,essv5412231,essv6389276,essv5574495,essv6281010,essv5950218,essv6438894,essv5914215,essv6420096,essv5690906,essv6222095,essv5743495,essv6364771,essv5799845,essv6253377,essv5810987,essv6567490,essv5676682,essv6455316,essv5797735,essv6455651,essv5822662,essv6539504,essv5679696,essv6589774,essv5745546,essv6236443,essv5829028,essv6499923,essv5697605,essv6239144,essv5563752,essv6489344,essv5692571,essv6198656,essv5949633,essv6284332,essv5564291,essv6317148,essv6069255,essv6196148,essv6101480,essv6457412,essv5814198,essv6451822,essv5792661,essv6281240,essv5546711,essv6195976,essv5513721,essv6241220,essv5735936,essv6454762,essv5552172,essv6582880,essv5935568,essv6489866,essv6089500,essv6172272,essv5425928,essv5721676,essv5544138,essv5493486,essv5490043,essv6040550,essv5982823,essv5440623,essv5948978,essv5425839,essv5434883,essv5931393,essv6038483,essv5649593,essv5440445,essv5645674,essv5662536,essv6026626,essv6003159,essv5455457,essv5671159,essv5596636,essv5859917,essv5989382,essv5645667,essv5655150,essv5474602,essv5514146,essv5862358,essv5463504,essv6086033,essv6009282,essv5958672,essv5580054,essv5984015,essv5552684,essv5481254,essv5908317,essv6009350,essv5835270,essv6011900,essv6026602,essv5675048,essv5860078,essv6118494,essv5460824,essv6079631,essv5488685,essv6121569,essv5907229,essv5667647,essv5851870,essv5555798,essv5461293,essv5657182,essv6051382,essv5492376,essv5593100,essv5596722,essv6010525,essv6116518,essv5871249,essv6112515,essv6010927,essv6048564,essv6120348,essv5400647,essv6060093,essv5927617,essv5502153,essv5836794,essv5986805,essv5561679,essv5632950,essv6161799,essv5649371,essv5539220,essv5570464,essv6123322,essv5439720,essv5851499,essv6042936,essv5860012,essv5454654,essv5840392,essv5674114,essv5444318,essv5472316,essv6036697,essv5593442,essv5633885,essv5487258,essv5906743,essv5436690,essv5918981,essv5642732,essv5553553,essv5576029,essv5626489,essv5619959,essv5432076,essv5462278,essv5987438,essv5857215,essv6109964,essv5537723,essv5493619,essv5488708,essv5742053,essv5931499,essv6069405,essv6099027,essv6159333,essv5557671,essv5595811,essv6011822,essv5864499,essv5429972,essv5869603,essv5554398,essv5881248,essv6050377,essv5711005,essv5864085,essv6001636,essv5591860,essv5872828,essv5995758,essv6159535,essv5849778,essv6009645,essv5515568,essv6028267,essv5874014,essv5601001,essv5445907,essv5645752,essv5795580,essv5460664,essv5996809,essv5618172,essv6087791,essv5495316,essv5613485,essv5659417,essv5525436,essv5584199,essv6145633,essv5586893,essv5409673,essv5554740,essv5849868,essv5838549,essv5937739,essv6025572,essv5960624,essv5797462,essv5581861,essv5416350,essv5765320,essv6003168,essv5592072,essv5969913,essv6143554,essv5638599,essv5936481,essv5864800,essv5888174,essv5591604,essv5580077,essv5525642,essv5975240,essv5849907,essv5436195,essv5545113,essv5835084,essv5934353,essv5610594,essv5906556,essv5854357,essv5956536,essv6069086,essv6028911,essv5423090,essv6162983,essv5966344 M 1151 0 497 "" HG00106,HG00108,HG00111,HG00117,HG00119,HG00124,HG00131,HG00136,HG00139,HG00140,HG00141,HG00142,HG00145,HG00149,HG00152,HG00158,HG00160,HG00177,HG00180,HG00182,HG00188,HG00237,HG00239,HG00246,HG00251,HG00253,HG00257,HG00263,HG00264,HG00265,HG00273,HG00275,HG00276,HG00278,HG00280,HG00282,HG00285,HG00306,HG00309,HG00319,HG00320,HG00324,HG00325,HG00326,HG00327,HG00328,HG00335,HG00337,HG00342,HG00343,HG00344,HG00345,HG00346,HG00353,HG00361,HG00377,HG00404,HG00421,HG00422,HG00428,HG00473,HG00475,HG00479,HG00500,HG00513,HG00533,HG00534,HG00536,HG00556,HG00559,HG00566,HG00578,HG00581,HG00583,HG00584,HG00589,HG00590,HG00595,HG00610,HG00611,HG00613,HG00619,HG00626,HG00634,HG00638,HG00640,HG00654,HG00656,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00704,HG00705,HG00708,HG00731,HG01047,HG01052,HG01060,HG01061,HG01069,HG01070,HG01072,HG01073,HG01080,HG01095,HG01098,HG01102,HG01107,HG01108,HG01112,HG01124,HG01133,HG01134,HG01136,HG01137,HG01140,HG01170,HG01171,HG01173,HG01174,HG01177,HG01183,HG01204,HG01250,HG01251,HG01253,HG01254,HG01334,HG01342,HG01350,HG01353,HG01354,HG01356,HG01357,HG01359,HG01360,HG01365,HG01366,HG01374,HG01375,HG01377,HG01378,HG01384,HG01437,HG01440,HG01441,HG01455,HG01461,HG01465,HG01488,HG01489,HG01491,HG01497,HG01498,HG01550,HG01551,NA06986,NA07000,NA07037,NA07346,NA07347,NA07357,NA10851,NA11831,NA11843,NA11881,NA11892,NA11894,NA11919,NA11920,NA11931,NA11933,NA11994,NA11995,NA12003,NA12005,NA12046,NA12058,NA12154,NA12155,NA12273,NA12342,NA12383,NA12400,NA12414,NA12489,NA12748,NA12763,NA12775,NA12813,NA12827,NA12830,NA12891,NA12892,NA18486,NA18487,NA18489,NA18499,NA18501,NA18502,NA18504,NA18505,NA18507,NA18508,NA18510,NA18511,NA18516,NA18517,NA18519,NA18520,NA18522,NA18523,NA18534,NA18536,NA18539,NA18544,NA18545,NA18547,NA18548,NA18549,NA18553,NA18558,NA18560,NA18563,NA18567,NA18570,NA18571,NA18572,NA18574,NA18577,NA18595,NA18596,NA18603,NA18608,NA18610,NA18613,NA18615,NA18619,NA18620,NA18621,NA18626,NA18633,NA18636,NA18853,NA18856,NA18858,NA18861,NA18867,NA18868,NA18870,NA18871,NA18873,NA18874,NA18907,NA18908,NA18909,NA18910,NA18912,NA18916,NA18923,NA18924,NA18933,NA18934,NA18940,NA18941,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18950,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18963,NA18964,NA18965,NA18967,NA18968,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18980,NA18981,NA18982,NA18984,NA18985,NA18986,NA18987,NA18989,NA18990,NA19000,NA19003,NA19005,NA19007,NA19010,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19062,NA19063,NA19065,NA19066,NA19067,NA19068,NA19070,NA19072,NA19074,NA19076,NA19077,NA19078,NA19079,NA19080,NA19082,NA19083,NA19084,NA19085,NA19087,NA19088,NA19092,NA19093,NA19098,NA19099,NA19102,NA19107,NA19108,NA19114,NA19116,NA19119,NA19129,NA19130,NA19131,NA19137,NA19138,NA19144,NA19147,NA19152,NA19153,NA19159,NA19160,NA19171,NA19172,NA19189,NA19190,NA19197,NA19198,NA19200,NA19201,NA19204,NA19207,NA19209,NA19210,NA19213,NA19225,NA19235,NA19238,NA19239,NA19240,NA19248,NA19256,NA19257,NA19311,NA19312,NA19318,NA19334,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19384,NA19385,NA19390,NA19391,NA19393,NA19396,NA19398,NA19401,NA19403,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19453,NA19455,NA19457,NA19462,NA19466,NA19467,NA19469,NA19470,NA19471,NA19472,NA19474,NA19625,NA19655,NA19660,NA19664,NA19670,NA19684,NA19685,NA19700,NA19703,NA19704,NA19707,NA19712,NA19729,NA19777,NA19779,NA19818,NA19819,NA19834,NA19835,NA19900,NA19901,NA19904,NA19909,NA19914,NA19916,NA19920,NA19985,NA20276,NA20281,NA20289,NA20332,NA20342,NA20503,NA20505,NA20509,NA20512,NA20513,NA20516,NA20519,NA20520,NA20521,NA20525,NA20533,NA20536,NA20537,NA20542,NA20581,NA20582,NA20586,NA20754,NA20759,NA20765,NA20771,NA20795,NA20798,NA20803,NA20804,NA20805,NA20808,NA20813,NA20815,NA20818,NA20819,NA20826 esv1112137 1 4136737 4136737 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4248978 M 2 1 0 "" HuRef esv7714 1 4144380 4144560 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30155 M 1 0 0 "" esv2619231 1 4144615 4144664 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5231288 M 1 0 1 "" NA18507 nsv527177 1 4156802 4167034 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703573 M 2026 0 1 "" nsv830536 1 4179950 4325121 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442018 M 95 1 0 "" nsv830647 1 4217247 4387520 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442029 M 95 1 0 "" dgv8e199 1 4224491 4225895 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2657756,esv2673458 M 1151 0 4 "" NA19238,NA19240,NA19704,NA19713 esv25427 1 4224575 4225945 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14207 M 40 0 1 "" NA19240 esv3390866 1 4228381 4228400 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678401 M 185 1 0 "" NA19240 esv3309075 1 4228389 4228390 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7842258,essv7843075,essv7842708 M 185 3 0 "" NA19238,NA19239,NA19240 esv3409348 1 4228390 4228402 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898479,essv8898474,essv8898476,essv8898475,essv8898478,essv8898473,essv8898471,essv8898480,essv8898477,essv8898482,essv8898472,essv8898469 M 185 12 0 "" NA11920,NA12044,NA18489,NA18501,NA18505,NA18517,NA18858,NA18870,NA18912,NA19108,NA19129,NA19190 esv3307842 1 4228394 4228395 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7756460,essv7747544,essv7741132,essv7760907,essv7746447,essv7761652,essv7762140,essv7758826,essv7752966,essv7750355,essv7760230,essv7755504,essv7756302,essv7746182,essv7744805 M 185 15 0 "" NA11920,NA12044,NA18489,NA18501,NA18505,NA18517,NA18858,NA18870,NA18912,NA19108,NA19129,NA19190,NA19238,NA19239,NA19240 esv3405644 1 4228406 4228454 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674019,essv8674018,essv8674017 M 185 3 0 "" NA19238,NA19239,NA19240 nsv159648 1 4302984 4302984 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178226 M 24 "" esv2676117 1 4304416 4306791 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5633387 M 1151 0 1 "" HG00543 nsv545137 1 4321193 4333382 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708852 M 17421 0 1 "" nsv545138 1 4330229 4332969 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708853 M 17421 0 1 "" esv28339 1 4331521 4344215 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14362,esv17261,esv17217,esv19856,esv11599 M 40 9 24 "" NA06985,NA11894,NA11931,NA12287,NA12414,NA12489,NA12828,NA12878,NA15510,NA18505,NA18511,NA18517,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv545141 1 4332451 4333022 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708866,nssv708867,nssv708869,nssv708862,nssv708874,nssv708861,nssv708870,nssv708872,nssv708864,nssv708868,nssv708873,nssv708871,nssv708865,nssv708863 M 17421 11 3 "" dgv58n54 1 4332451 4333044 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545140,nsv545149,nsv545139,nsv545142 M 17421 0 9 "" dgv59n54 1 4332451 4333382 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545144,nsv545143 M 17421 28 10 "" nsv545145 1 4332451 4335175 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708916,nssv708914,nssv708915 M 17421 0 3 "" nsv511131 1 4332451 4335752 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626587 M 1 0 1 "" 1 dgv60n54 1 4332451 4343718 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545148,nsv545146,nsv545147 M 17421 3 0 "" dgv61n54 1 4332553 4333382 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545152,nsv545150,nsv545151 M 17421 0 4 "" nsv545153 1 4332658 4333382 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708925 M 17421 1 0 "" dgv62n54 1 4332814 4333382 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545155,nsv545154 M 17421 0 8 "" esv2505018 1 4336233 4336941 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5228093 M 1 1 0 "" NA18507 esv1619694 1 4336528 4336528 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3918928 M 2 1 0 "" HuRef nsv545156 1 4343513 4343610 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708935,nssv708934 M 17421 0 2 "" esv275066 1 4361000 4364055 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585519 M 1250 0 1 "" dgv29e59 1 4368832 4370030 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3368163,esv3376842 M 185 2 0 "" NA19239,NA19240 esv2672854 1 4375993 4376297 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6465373,essv6139564,essv6000199 M 1151 0 3 "" HG00123,HG00257,HG01375 nsv830759 1 4387521 4609301 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442040,nssv1442051 M 95 0 2 "" esv2213507 1 4420097 4420514 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4764956 M 1 0 1 "" NA18507 esv1543124 1 4420294 4420356 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4354508 M 2 0 1 "" HuRef esv2672972 1 4428062 4428162 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5978506,essv6054418,essv5714456,essv5614695,essv6116106,essv5769901,essv5685157,essv6573552,essv6043739,essv5837934,essv6538357,essv5592587 M 1151 0 12 "" HG00419,HG00500,HG00614,HG00701,NA18546,NA18611,NA18622,NA18947,NA18949,NA18951,NA18956,NA19385 nsv545157 1 4463297 4492742 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708936 M 17421 1 0 "" esv2661002 1 4471052 4471186 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5772876,essv5966210,essv6134925 M 1151 0 3 "" HG01350,NA19403,NA19428 esv3310012 1 4471993 4471994 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837624,essv7837087 M 185 2 0 "" NA19239,NA19240 esv3436839 1 4471995 4472021 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674025 M 185 1 0 "" NA19239 nsv472740 1 4497890 4497890 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018924 M 9 1 0 "" NA18555 nsv460394 1 4513929 4532056 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536980 M 1557 0 1 "" HGDP01098 esv2671580 1 4520784 4520989 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6587502,essv6257927,essv5407184,essv5731698,essv6037263,essv5590938,essv6231661,essv6229009,essv5720705,essv6538900,essv5422846,essv6363560,essv5764373,essv5710584,essv5859093,essv5992912,essv5862798,essv6368850,essv5501578,essv6266311,essv6096784,essv6246274,essv6099990,essv5874860,essv6521795,essv6002759,essv5922543,essv6104316,essv6062337,essv5666271,essv6482185,essv6366529,essv6208030,essv5483632,essv5930263,essv5562243,essv5976681,essv5865402,essv5533759,essv5661666,essv5521901,essv5638302,essv5972701,essv6299431,essv6569382,essv6374513,essv5403681 M 1151 0 47 "" HG00111,HG00237,HG00252,HG00254,HG00257,HG00271,HG00275,HG00276,HG00277,HG00281,HG00282,HG00284,HG00310,HG00313,HG00318,HG00319,HG00323,HG00328,HG00329,HG00334,HG00335,HG00337,HG00339,HG00343,HG00478,HG00534,HG00584,HG00619,HG01051,HG01066,HG01072,HG01107,HG01108,HG01174,HG01187,HG01334,HG01374,HG01440,NA18520,NA18534,NA18537,NA18599,NA18605,NA19379,NA19381,NA19394,NA20513 esv1006796 1 4535970 4542029 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586737 M 3 0 1 "" HuRef esv21437 1 4537857 4543308 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13444 M 40 0 1 "" NA18861 esv2469165 1 4543230 4544306 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5375102 M 1 1 0 "" NA18507 esv995887 1 4543702 4543702 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569284 M 3 1 0 "" HuRef esv1262838 1 4543722 4543722 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3924372 M 2 1 0 "" HuRef nsv953824 1 4613241 4618640 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000140 M 1 0 1 "" BILGI_BIOE esv2398993 1 4616253 4616762 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4895725 M 1 0 1 "" NA18507 esv2658197 1 4616437 4616584 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6420799,essv5935021,essv6495919,essv6024062,essv6360320,essv5755317,essv6133000,essv5772039,essv6325599,essv5455064,essv6320726,essv6103413,essv6200790,essv6082959,essv6167600,essv5869103,essv6313667,essv5991829,essv6150504,essv6004021,essv6170218,essv5895546,essv6201371,essv6013490,essv6510967,essv5737114,essv6352455,essv5434110,essv6418000,essv5833924,essv6492515,essv5790060,essv6157654,essv5690322,essv6440247,essv5588715,essv6194615,essv5624213,essv6520463,essv5796451,essv6514653,essv6039205,essv6323215,essv5768132,essv6362493,essv5812387,essv6570959,essv5990605,essv6522193,essv5434435,essv6288614,essv6045522,essv6187654,essv5906173,essv6177835,essv5773359,essv6452512,essv5445628,essv6386889,essv5911545,essv6220185,essv5434102,essv6587508,essv5764573,essv6300955,essv5738365,essv6160512,essv5492548,essv6147526,essv6035492,essv6185984,essv5488638,essv6412559,essv5690863,essv6235618,essv5821408,essv6462194,essv5504528,essv6561280,essv5917912,essv6127008,essv5545152,essv6130018,essv5680392,essv6149495,essv5708378,essv6580955,essv5970293,essv6401699,essv6029957,essv6261916,essv5531218,essv6351731,essv5743042,essv6469647,essv5817691,essv6279379,essv5912276,essv6469110,essv5549301,essv6410115,essv5640486,essv6578430,essv6088752,essv6549251,essv5692595,essv6494304,essv5679766,essv6307983,essv5718450,essv6156671,essv5700422,essv6396763,essv5466375,essv6589744,essv5852026,essv6536116,essv5525380,essv6276284,essv5909082,essv6129356,essv6005288,essv6524956,essv5669101,essv6303440,essv5595406,essv6465232,essv5996438,essv6477773,essv5881960,essv6169913,essv5858536,essv6165117,essv5999686,essv6326323,essv5656641,essv6485722,essv5849873,essv6256947,essv6058464,essv6210893,essv5494920,essv6551957,essv5918827,essv6551775,essv5636975,essv6198829,essv5923630,essv6462347,essv5491259,essv5407800,essv5628898,essv5651641,essv5867660,essv5407868,essv5590110,essv5934882,essv5532520,essv5625990,essv5565994,essv6003061,essv6106046,essv5935035,essv5823142,essv5948491,essv6099242,essv5412484,essv5666262,essv5628805,essv5490017,essv5488930,essv5628346,essv6011694,essv5446984,essv5669835,essv5586772,essv5451670,essv5991881,essv5621909,essv5956711,essv6064479,essv6111236 M 1151 0 182 "" HG00114,HG00125,HG00136,HG00375,HG00421,HG00437,HG00442,HG00473,HG00475,HG00478,HG00512,HG00513,HG00524,HG00530,HG00534,HG00536,HG00583,HG00607,HG00608,HG00611,HG00614,HG00619,HG00620,HG00628,HG00637,HG00657,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00699,HG00705,HG00731,HG01066,HG01073,HG01083,HG01097,HG01171,HG01177,HG01354,HG01440,NA07051,NA12546,NA12889,NA12891,NA18486,NA18487,NA18488,NA18511,NA18517,NA18523,NA18526,NA18530,NA18532,NA18538,NA18541,NA18544,NA18545,NA18546,NA18547,NA18549,NA18552,NA18553,NA18559,NA18561,NA18563,NA18566,NA18571,NA18572,NA18573,NA18595,NA18596,NA18605,NA18610,NA18612,NA18613,NA18616,NA18620,NA18624,NA18628,NA18631,NA18632,NA18633,NA18637,NA18638,NA18867,NA18870,NA18874,NA18912,NA18933,NA18941,NA18944,NA18949,NA18951,NA18952,NA18953,NA18960,NA18961,NA18963,NA18968,NA18974,NA18977,NA18980,NA18985,NA18989,NA18991,NA19000,NA19002,NA19004,NA19007,NA19054,NA19055,NA19057,NA19065,NA19066,NA19068,NA19070,NA19077,NA19080,NA19082,NA19084,NA19085,NA19087,NA19088,NA19102,NA19107,NA19108,NA19116,NA19147,NA19189,NA19198,NA19207,NA19210,NA19213,NA19239,NA19240,NA19312,NA19315,NA19318,NA19319,NA19324,NA19331,NA19334,NA19346,NA19347,NA19359,NA19374,NA19375,NA19379,NA19380,NA19381,NA19382,NA19383,NA19391,NA19428,NA19431,NA19434,NA19439,NA19453,NA19455,NA19462,NA19471,NA19473,NA19625,NA19712,NA19722,NA19818,NA19834,NA19982,NA19985,NA20278,NA20282,NA20287,NA20502,NA20505,NA20528,NA20544,NA20581,NA20819 esv2988766 1 4616449 4616584 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7258333 M 1 0 1 "" HuRef nsv545158 1 4644895 4667026 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708937 M 17421 0 1 "" esv3330361 1 4646832 4649130 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692349 M 185 1 0 "" NA19240 nsv825475 1 4653059 4657375 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433404 M 31 1 0 "" NA18526 esv1009421 1 4674714 4678066 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565733 M 3 0 1 "" HuRef nsv460505 1 4677471 4693997 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537066 M 1557 0 1 "" 1780862093_A nsv545159 1 4677471 4693997 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1172594 M 17421 0 1 "" 1780862093_A nsv520031 1 4687677 4690970 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701964,nssv660165,nssv683157 M 2026 0 3 "" nsv521535 1 4687677 4712657 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694458 M 2026 0 1 "" nsv953834 1 4689541 4726040 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000251 M 1 0 1 "" BILGI_BIOE nsv460617 1 4690970 4727059 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537158 M 1557 0 1 "" NINDS_66 nsv545160 1 4690970 4727059 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173647 M 17421 0 1 "" NINDS_66 nsv830870 1 4735326 4921239 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442062 M 95 0 1 "" esv2651800 1 4740086 4741130 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5191133 M 1 1 0 "" NA18507 nsv830981 1 4762205 4938191 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442074 M 95 1 0 "" esv3409614 1 4767598 4767644 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740928 M 185 1 0 "" NA12878 nsv521327 1 4812511 4814445 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697933 M 2026 0 1 "" dgv9e199 1 4822078 4822978 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2662806,esv2658527 M 1151 0 6 "" HG00150,HG00251,HG00256,HG00418,NA18990,NA19003 nsv632 1 4849353 4853512 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2960 M 9 1 0 "" NA18555 nsv473410 1 4877870 4877870 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018919 M 9 1 0 "" NA19129 nsv958396 1 4907591 4910538 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003727 M 1 0 1 "" BILGI_BIOE esv3310485 1 4939127 4940136 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843542 M 185 1 0 "" NA19240 esv3328269 1 4939499 4939702 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652090 M 185 1 0 "" NA19240 esv3450010 1 4939597 4939713 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808971 M 185 1 0 "" NA12878 esv3382602 1 4946132 4946930 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692354 M 185 1 0 "" NA19239 dgv10e199 1 4968043 4996308 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2659456,esv2674284 M 1151 0 1 "" NA19473 esv2764243 1 4968156 5000178 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004913,essv7004916,essv7004915,essv7004914 M 1109 0 4 "" RW_0164,RW_0321,RW_0351,RW_0579 nsv521101 1 4971319 4994290 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682279,nssv687649 M 2026 0 2 "" nsv474096 1 4978237 4978237 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011788 M 9 1 0 "" NA12156 nsv478576 1 4980844 4980844 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018520 M 9 1 0 "" NA18507 nsv476165 1 4991553 4991553 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012866 M 9 1 0 "" NA12878 esv2483299 1 4993292 4994408 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5225073 M 1 0 1 "" NA18507 nsv525603 1 5008150 5008895 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701747 M 2026 0 1 "" esv3386646 1 5029980 5030035 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898483 M 185 1 0 "" NA19093 esv3306851 1 5029992 5029993 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7749686 M 185 1 0 "" NA19093 dgv63n54 1 5043977 5110652 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545166,nsv545165,nsv545161 M 17421 4 0 "" nsv523740 1 5053851 5110652 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv699556 M 2026 1 0 "" dgv64n54 1 5053851 5113744 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545164,nsv545167,nsv545162,nsv545163 M 17421 0 7 "" HGDP00529 nsv460839 1 5053851 5113744 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537339 M 1557 0 1 "" HGDP00529 esv32797 1 5067210 5108785 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101012 M 51 0 1 "" 21693 esv1109223 1 5075721 5075721 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4201133 M 2 1 0 "" HuRef nsv520723 1 5091185 5104364 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv697576 M 2026 1 0 "" esv2675761 1 5103574 5105074 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6419459 M 1151 0 1 "" HG00692 esv2532762 1 5111987 5112704 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5197882 M 1 1 0 "" NA18507 esv2657993 1 5112274 5113511 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5720924,essv6291611 M 1151 0 2 "" HG00611,HG00654 esv1289856 1 5112430 5112430 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3630167 M 2 1 0 "" HuRef esv2464561 1 5120794 5120870 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5250667 M 1 0 1 "" NA18507 esv27138 1 5136611 5137354 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13523 M 40 0 1 "" NA19240 esv2465114 1 5160091 5160836 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5290540 M 1 1 0 "" NA18507 esv2918 1 5160201 5160547 CNV loss Wang_et_al_2008 18987735 Sequencing essv25359 M 1 0 1 "" YH nsv521242 1 5223882 5227048 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697864 M 2026 0 1 "" nsv545168 1 5223963 5245304 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708948 M 17421 0 1 "" esv2758917 1 5229707 5476618 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757720 M 270 1 0 "" NA19003 esv2656583 1 5242052 5244500 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5642149,essv5836252 M 1151 0 2 "" NA19452,NA19461 esv1963263 1 5245964 5246390 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4703012 M 1 0 1 "" NA18507 nsv460950 1 5270697 5288210 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537425 M 1557 0 1 "" HGDP00998 nsv545169 1 5270697 5288210 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173649 M 17421 0 1 "" HGDP00998 esv2671665 1 5290850 5291216 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6509635,essv5659484,essv5856400,essv6540368,essv5800925,essv5779798,essv6296706,essv5440076,essv6328526,essv6492274,essv6052126,essv6246074,essv5996842 M 1151 0 13 "" HG00160,HG00278,HG00280,HG00375,HG00731,HG01551,NA12155,NA12282,NA12892,NA19663,NA19703,NA19749,NA20507 esv2663969 1 5299219 5302075 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5404073,essv6181377,essv5861421,essv5526874,essv5451969 M 1151 0 5 "" HG00638,NA18856,NA19319,NA19451,NA19472 esv2675805 1 5303999 5304152 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6328751,essv5816756,essv6364649,essv5400386,essv6289486,essv5668653,essv6100647,essv5716908,essv6108303,essv6078532,essv6312434,essv5723271,essv5745198,essv5487076,essv6015776,essv6431643,essv6135067,essv6209727,essv5620206,essv6402807,essv5454067,essv5488147,essv6021653,essv5510135,essv6276849,essv5495326,essv5631414,essv5691159,essv5416167,essv5932932,essv5920700,essv6010416,essv6459561,essv6097545,essv5866775,essv5640185,essv5856831,essv5891462,essv6038176,essv6017677,essv5950071,essv6368144,essv6003274,essv5904658,essv5395854,essv5564616,essv6048366,essv6396847,essv6374400,essv6352895,essv6515529,essv5535297,essv5437083,essv5628770 M 1151 0 54 "" HG00111,HG00137,HG00139,HG00140,HG00252,HG00253,HG00271,HG00275,HG00281,HG00282,HG00310,HG00313,HG00320,HG00321,HG00330,HG00337,HG00338,HG00339,HG00437,HG00442,HG00473,HG00475,HG00476,HG00500,HG00513,HG00543,HG00556,HG00584,HG00590,HG00619,HG00650,HG00692,HG00698,HG00699,HG00701,HG00705,HG01070,HG01075,HG01083,HG01173,HG01174,HG01334,NA18530,NA18557,NA18559,NA18611,NA18612,NA18613,NA18620,NA18622,NA18632,NA18636,NA19404,NA19920 nsv481312 1 5323890 5323890 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012002 M 9 0 0 "" nsv473792 1 5323891 5323891 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012563 M 9 1 0 "" NA12156 nsv480602 1 5325157 5325157 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017310 M 9 0 0 "" nsv474984 1 5325973 5325973 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018294 M 9 1 0 "" NA18956 nsv477558 1 5327258 5327258 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012506 M 9 1 0 "" NA18517 nsv481266 1 5327793 5327793 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012335 M 9 0 0 "" nsv479925 1 5330808 5330808 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014061 M 9 0 0 "" nsv473968 1 5330984 5330984 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015924 M 9 1 0 "" NA12156 nsv10605 1 5333530 5334953 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28532,nssv29260,nssv24593,nssv21430 M 31 4 0 "" NA07029,NA07048,NA12802,NA18504 nsv479465 1 5334414 5334414 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020534 M 9 0 0 "" nsv479520 1 5336780 5336780 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013929 M 9 0 0 "" nsv474387 1 5336854 5336854 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015116 M 9 1 0 "" NA18956 nsv480617 1 5337380 5337380 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011387 M 9 0 0 "" nsv474375 1 5337654 5337654 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016753 M 9 1 0 "" NA18956 nsv479836 1 5338988 5338988 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019925 M 9 0 0 "" nsv472280 1 5340898 5340898 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019293 M 9 1 0 "" NA18555 nsv481139 1 5342262 5342262 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013782 M 9 0 0 "" nsv479964 1 5343287 5343287 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015499 M 9 0 0 "" esv2677954 1 5343355 5344624 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5814474 M 1151 0 1 "" NA19703 nsv480009 1 5343483 5343483 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014433 M 9 0 0 "" esv2259894 1 5413969 5414397 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4831068 M 1 0 1 "" NA18507 nsv160607 1 5414108 5414181 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179185 M 24 "" esv2988852 1 5414152 5414227 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7258419 M 1 0 1 "" HuRef esv1028089 1 5414170 5414245 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4224996 M 2 0 1 "" HuRef nsv10716 1 5414970 5416750 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26903 M 31 1 0 "" NA19221 nsv479240 1 5425281 5425281 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014489 M 9 0 0 "" nsv472893 1 5425413 5425413 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019845 M 9 1 0 "" NA19129 nsv479719 1 5425563 5425563 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018029 M 9 0 0 "" nsv481014 1 5426119 5426119 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012558 M 9 0 0 "" nsv481354 1 5426473 5426473 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019584 M 9 0 0 "" nsv473687 1 5428849 5428849 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010833 M 9 1 0 "" NA19129 nsv477009 1 5429522 5429522 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019418 M 9 1 0 "" NA12878 nsv545170 1 5429807 5481145 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708949 M 17421 0 1 "" nsv481592 1 5430448 5430448 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012018 M 9 0 0 "" nsv479588 1 5431611 5431611 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014470 M 9 0 0 "" nsv480794 1 5433277 5433277 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019522 M 9 0 0 "" nsv831092 1 5433308 5583684 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442085 M 95 1 0 "" nsv481180 1 5433855 5433855 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018352 M 9 0 0 "" nsv473316 1 5436697 5436697 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014447 M 9 1 0 "" NA19129 nsv479984 1 5438181 5438181 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012502 M 9 0 0 "" nsv480922 1 5438761 5438761 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020124 M 9 0 0 "" nsv475183 1 5440571 5440571 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018681 M 9 1 0 "" NA19240 nsv473909 1 5440880 5440880 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018625 M 9 1 0 "" NA12156 nsv475512 1 5443784 5443784 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011760 M 9 1 0 "" NA19240 esv2607553 1 5499449 5499550 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5236789 M 1 0 1 "" NA18507 nsv953925 1 5537741 5547640 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3000303 M 1 1 0 "" BILGI_BIOE nsv478357 1 5545218 5545218 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011835 M 9 1 0 "" NA18507 nsv527712 1 5563623 5565506 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704192 M 2026 0 1 "" dgv2n21 1 5564469 5565506 CNV loss Shaikh_et_al_2009 19592680 SNP array nsv519513,nsv526005 M 2026 0 4 "" esv2669319 1 5573628 5573926 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6234181,essv5607342,essv6355678,essv6429604,essv5453155,essv5928382,essv6496995,essv5608106,essv6173891,essv6498314,essv6463945,essv6305492,essv6452914,essv5826814,essv5889786,essv6208210,essv6334378,essv5400393,essv6346612,essv6476038,essv6506229,essv6036715,essv5603993,essv6149955,essv6410575,essv5636736,essv5478691,essv5560026,essv5483457,essv5587877,essv5399348 M 1151 0 31 "" HG00329,HG00375,HG00501,HG00524,HG01440,NA07051,NA11993,NA12004,NA12044,NA12749,NA12750,NA12813,NA12828,NA18486,NA18523,NA18558,NA18853,NA18916,NA18956,NA18967,NA18972,NA18975,NA19098,NA19171,NA19312,NA19373,NA19374,NA19397,NA19463,NA19625,NA19818 esv2673462 1 5584586 5585383 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6161251,essv6139149,essv6576477 M 1151 0 3 "" NA19380,NA19382,NA19436 esv1008325 1 5593289 5593289 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577403 M 3 1 0 "" HuRef esv1402936 1 5593290 5593290 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3729262 M 2 1 0 "" HuRef esv2165265 1 5603163 5603530 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4655011 M 1 0 1 "" NA18507 esv2622825 1 5603774 5603834 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5341576 M 1 0 1 "" NA18507 nsv945752 1 5653646 5658065 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750253,nssv1750231,nssv1750313,nssv1750299,nssv1750262,nssv1750238,nssv1750294,nssv1750236,nssv1750284,nssv1750230,nssv2572202,nssv1750233,nssv1750292,nssv1750223,nssv1750308,nssv1750302,nssv2572205,nssv1750234,nssv2572200,nssv1750239,nssv1750260,nssv1750301,nssv1750252,nssv1750227,nssv1750267,nssv1750307,nssv1750277,nssv1750222,nssv1750268,nssv1750240,nssv1750259,nssv1750228,nssv1750285,nssv1750303,nssv2572197,nssv1750306,nssv1750311,nssv1750229,nssv1750278,nssv1750298,nssv1750305,nssv1750226,nssv2572209,nssv1750304,nssv2572207,nssv1750235,nssv1750310,nssv1750300,nssv1750261,nssv1750225,nssv1750257,nssv1750224,nssv1750255,nssv1750237,nssv2572203,nssv1750232,nssv2572213,nssv1750246,nssv1750314,nssv1750244,nssv1750312,nssv1750309,nssv2572210,nssv1750286,nssv1750296,nssv2572204,nssv2572208,nssv1750275,nssv1750276,nssv1750273,nssv2572198,nssv1750297,nssv2572212,nssv1750274,nssv2572199,nssv1750295,nssv1750270,nssv1750241,nssv1750315,nssv2572206,nssv1750272,nssv1750282,nssv1750266,nssv1750290,nssv1750247,nssv1750256,nssv1750280,nssv1750283,nssv1750263,nssv1750317,nssv1750264,nssv1750243,nssv1750250,nssv1750316,nssv1750293,nssv2572211,nssv1750249,nssv1750245,nssv1750289,nssv1750279,nssv1750221,nssv1750242,nssv1750269,nssv1750291,nssv1750288,nssv1750251,nssv1750254,nssv2572201,nssv1750281,nssv1750248,nssv1750271,nssv1750287,nssv1750265,nssv1750258 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2736140 1 5655784 5655896 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6906088,essv6675186,essv6707250 M 96 0 3 "" SSM014,SSM032,SSM041 esv3368079 1 5657102 5657102 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740929 M 185 1 0 "" NA12878 dgv30e59 1 5664605 5677103 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3335249,esv3391008,esv3435601,esv3346737,esv3335908,esv3345322 M 185 6 0 "" NA12878,NA12891,NA12892,NA19238,NA19239,NA19240 nsv945753 1 5665755 5676552 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750324,nssv1750348,nssv1750396,nssv1750368,nssv1750327,nssv1750374,nssv1750330,nssv1750356,nssv1750335,nssv2572231,nssv1750326,nssv1750406,nssv1750320,nssv1750384,nssv1750404,nssv1750381,nssv1750403,nssv1750349,nssv1750401,nssv1750411,nssv1750399,nssv1750388,nssv1750321,nssv1750340,nssv1750337,nssv1750318,nssv1750328,nssv2572227,nssv1750398,nssv1750410,nssv1750319,nssv1750382,nssv1750400,nssv1750394,nssv1750395,nssv1750407,nssv1750336,nssv1750357,nssv1750331,nssv1750392,nssv1750332,nssv1750339,nssv1750322,nssv1750361,nssv1750325,nssv1750345,nssv1750397,nssv1750362,nssv1750323,nssv1750387,nssv1750329,nssv1750389,nssv1750334,nssv1750367,nssv1750333,nssv1750405,nssv2572226,nssv2572229,nssv1750355,nssv1750380,nssv1750358,nssv1750408,nssv1750366,nssv2572230,nssv1750350,nssv1750385,nssv2572219,nssv2572225,nssv1750375,nssv1750365,nssv1750354,nssv1750390,nssv1750364,nssv1750360,nssv1750352,nssv1750391,nssv1750343,nssv2572215,nssv2572222,nssv1750341,nssv1750386,nssv1750377,nssv1750373,nssv1750370,nssv1750359,nssv1750379,nssv1751337,nssv1750338,nssv2572224,nssv1750402,nssv1750371,nssv2572223,nssv1750383,nssv1750351,nssv2572216,nssv2572217,nssv1750372,nssv1750347,nssv1750393,nssv1750363,nssv1751338,nssv1750376,nssv2572220,nssv1750409,nssv1750344,nssv2572218,nssv1750353,nssv1751336,nssv1750346,nssv1750378,nssv1750369,nssv1750342,nssv2572214,nssv2572221 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2674386 1 5667633 5667899 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6565812,essv6190723,essv6221620,essv6148778,essv5790903,essv5972280,essv6129857,essv5832322,essv5411958,essv5504297,essv5549176,essv5692394,essv5786001,essv5935278,essv6213259,essv6122182,essv5768514,essv5932568,essv5499783,essv5850151,essv6566648,essv5898834,essv6356112,essv6212200,essv6384347,essv5738482,essv6060968,essv5927529,essv6509161,essv6294299,essv5665252,essv5418071,essv6310515,essv5667480,essv6301555,essv6326712,essv5489756,essv5571822,essv6384104,essv5574275,essv5613090,essv6020750,essv6108169 M 1151 0 43 "" HG00251,HG00418,HG00422,HG00427,HG00428,HG00437,HG00448,HG00463,HG00500,HG00534,HG00657,HG00684,HG00689,HG00690,HG00698,HG00701,HG00702,HG00705,HG00708,HG01108,NA18519,NA18549,NA18557,NA18592,NA18636,NA18637,NA18917,NA18945,NA18960,NA19225,NA19359,NA19371,NA19374,NA19377,NA19380,NA19382,NA19384,NA19385,NA19463,NA19703,NA20299,NA20317,NA20322 dgv2e201 1 5667668 5668119 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2736473,esv2736251 M 96 0 9 "" SSM026,SSM029,SSM034,SSM075,SSM078,SSM088,SSM089,SSM097,SSM098 esv2736362 1 5667672 5667830 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972305,essv6816567,essv6859167 M 96 0 3 "" SSM029,SSM078,SSM088 esv2736584 1 5667907 5668293 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6888992 M 96 0 1 "" SSM097 nsv956700 1 5668130 5668287 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000519 M 1 0 1 "" BILGI_BIOE nsv953926 1 5669941 5676440 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3000315 M 1 1 0 "" BILGI_BIOE esv2474640 1 5671768 5674629 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5304912 M 1 1 0 "" NA18507 nsv545171 1 5693290 5827080 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708950 M 17421 1 0 "" nsv523099 1 5698712 5705293 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698792 M 2026 1 0 "" esv2736695 1 5701424 5701600 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6892304 M 96 0 1 "" SSM098 esv2662153 1 5706924 5707156 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6320453,essv6036122,essv5689657 M 1151 0 3 "" NA19372,NA19399,NA20340 nsv521706 1 5730438 5730595 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698329 M 2026 1 0 "" esv2736806 1 5736168 5736763 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6725837,essv6679146,essv6703847,essv6843732 M 96 0 4 "" SSM011,SSM033,SSM040,SSM046 esv2736917 1 5736271 5736389 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6843732 M 96 0 1 "" SSM011 esv2737028 1 5736271 5736579 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6725837,essv6703847,essv6843732 M 96 0 3 "" SSM011,SSM040,SSM046 esv2165525 1 5743982 5744443 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4933008 M 1 0 1 "" NA18507 esv2737139 1 5744030 5744272 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6686143,essv6895833 M 96 0 2 "" SSM035,SSM099 nsv470688 1 5751064 5853561 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547688,nssv547687 M 443 0 2 "" HGDP00546,HGDP00550 esv3408840 1 5772698 5772717 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863671,essv7863672 M 185 2 0 "" NA12005,NA18871 nsv508723 1 5777215 5971948 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619764,nssv619765,nssv623770 M 4 2 0 "" NA10860,NA18994 esv2737251 1 5795892 5796110 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6832584,essv6843870,essv6917408,essv6921698,essv6828989,essv6836177,essv6668917,essv6776920 M 96 0 8 "" SSM017,SSM018,SSM031,SSM067,SSM081,SSM082,SSM083,SSM085 esv2444036 1 5802593 5803341 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5245268 M 1 1 0 "" NA18507 dgv31e59 1 5808105 5810103 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330767,esv3376026,esv3440591 M 185 3 0 "" NA19238,NA19239,NA19240 esv2659247 1 5809280 5809498 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6420906,essv6072796,essv6501693,essv6137578,essv6270096,essv5753693,essv6372706,essv5453731,essv6291960,essv6144564,essv6493709,essv6023402,essv6417879,essv5699105,essv6556647,essv6000861,essv6246524,essv5724237,essv6374721,essv5971857,essv6237537,essv5679057,essv6427748,essv5899676,essv6478707,essv5790012,essv6444738,essv5450047,essv6288594,essv6090069,essv6335616,essv5760897,essv6183284,essv5400301,essv6166775,essv6021243,essv6303300,essv5403979,essv6594867,essv6146613,essv6563797,essv5795745,essv6198412,essv5836217,essv6265953,essv5826381,essv6236574,essv5808919,essv6276782,essv5406603,essv6171323,essv5713476,essv6543831,essv5797925,essv6508257,essv5733018,essv6323533,essv5580254,essv6268734,essv6137619,essv6263762,essv6096512,essv6166486,essv5678721,essv6594372,essv6072153,essv6393188,essv5596387,essv6394450,essv5484012,essv6505625,essv5937573,essv6388559,essv5704918,essv6285635,essv5735340,essv6482724,essv5908603,essv6202614,essv5659979,essv6174141,essv5559934,essv6278486,essv6125527,essv6263918,essv5843991,essv6440560,essv6094768,essv6334106,essv5681547,essv6574311,essv6110710,essv6564734,essv6094353,essv6200594,essv5694052,essv6348497,essv5729154,essv6558526,essv5415067,essv6391005,essv5467941,essv6224977,essv5502312,essv6481719,essv5793845,essv6192872,essv5744973,essv6392803,essv5427209,essv6190114,essv6006918,essv6479997,essv5695467,essv6549217,essv5484342,essv6266718,essv5752258,essv6300778,essv5745359,essv6320485,essv5635226,essv6587858,essv5839935,essv6391420,essv5438361,essv6375852,essv5966889,essv6387750,essv5407382,essv6189820,essv5714010,essv6234994,essv5495816,essv6465745,essv5630462,essv6492365,essv5934675,essv6287356,essv5462412,essv6558821,essv5485167,essv6235548,essv6066661,essv6375911,essv5505041,essv6273426,essv5411190,essv6444493,essv6109050,essv6383400,essv5530077,essv6451164,essv6142082,essv6196076,essv5592554,essv6416691,essv5937931,essv6318232,essv5885870,essv6555572,essv5635426,essv6244996,essv6125751,essv6330278,essv5997187,essv6420973,essv5892249,essv6404529,essv5665492,essv6363014,essv5580177,essv6178429,essv6021599,essv6391714,essv5404710,essv6406075,essv5476553,essv6217808,essv5497528,essv6309709,essv5477693,essv6592924,essv5861818,essv6385332,essv5858332,essv6360109,essv5507567,essv6518158,essv5610805,essv6189034,essv5853215,essv6189773,essv5601497,essv6471952,essv5660082,essv6582137,essv6080301,essv6245044,essv5595470,essv6344090,essv6011891,essv6369064,essv5572813,essv6389765,essv5594926,essv6342193,essv6139291,essv6481508,essv5441847,essv6477225,essv5624910,essv6378969,essv6045833,essv6486815,essv5905111,essv5844994,essv6137882,essv6096805,essv5527474,essv6106470,essv6053442,essv6108729,essv6144072,essv5914664,essv6080470,essv5399605,essv5557873,essv5544803,essv6021408,essv6086130,essv5930468,essv5813827,essv5586732,essv6020011,essv5963404,essv5662055,essv5631474,essv5438706,essv5618174,essv5732112,essv5934148,essv6111972,essv6120847,essv5422692,essv5662477,essv5650758,essv5668045,essv6123735,essv6040793,essv5791740,essv5894682,essv5554352,essv5440563,essv6107151,essv6138525,essv5968327,essv5637654,essv5630584,essv5849894,essv5414371,essv5612808,essv6022244,essv6067888,essv6075485 M 1151 0 265 "" HG00096,HG00114,HG00119,HG00120,HG00125,HG00137,HG00146,HG00149,HG00182,HG00188,HG00189,HG00233,HG00242,HG00244,HG00253,HG00254,HG00256,HG00265,HG00269,HG00271,HG00273,HG00284,HG00306,HG00308,HG00320,HG00327,HG00339,HG00343,HG00369,HG00372,HG00373,HG00418,HG00427,HG00442,HG00448,HG00475,HG00512,HG00524,HG00537,HG00551,HG00557,HG00565,HG00581,HG00608,HG00614,HG00626,HG00629,HG00635,HG00651,HG00657,HG00662,HG00689,HG00690,HG00692,HG00693,HG00701,HG00705,HG00707,HG00731,HG00732,HG00737,HG01048,HG01066,HG01067,HG01072,HG01073,HG01098,HG01101,HG01112,HG01124,HG01148,HG01149,HG01254,HG01334,HG01342,HG01357,HG01375,HG01389,HG01461,HG01465,HG01489,HG01497,NA07048,NA07051,NA07056,NA11830,NA11892,NA11893,NA11994,NA12003,NA12045,NA12046,NA12286,NA12340,NA12347,NA12383,NA12413,NA12546,NA12718,NA12748,NA12750,NA12775,NA12777,NA12778,NA12827,NA12829,NA12842,NA12889,NA18486,NA18487,NA18499,NA18516,NA18534,NA18538,NA18543,NA18544,NA18549,NA18553,NA18557,NA18564,NA18567,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18606,NA18610,NA18614,NA18616,NA18617,NA18620,NA18624,NA18633,NA18635,NA18638,NA18868,NA18940,NA18949,NA18950,NA18960,NA18963,NA18964,NA18982,NA18988,NA18991,NA18999,NA19004,NA19009,NA19010,NA19062,NA19074,NA19075,NA19077,NA19078,NA19079,NA19083,NA19085,NA19088,NA19102,NA19107,NA19130,NA19189,NA19198,NA19256,NA19313,NA19316,NA19319,NA19327,NA19328,NA19331,NA19350,NA19360,NA19373,NA19374,NA19377,NA19379,NA19380,NA19384,NA19394,NA19397,NA19401,NA19431,NA19434,NA19436,NA19438,NA19439,NA19440,NA19443,NA19445,NA19453,NA19455,NA19461,NA19462,NA19466,NA19470,NA19474,NA19657,NA19658,NA19716,NA19719,NA19722,NA19723,NA19749,NA19774,NA19780,NA19786,NA19819,NA19904,NA19920,NA20127,NA20282,NA20296,NA20332,NA20334,NA20344,NA20348,NA20506,NA20514,NA20516,NA20521,NA20533,NA20535,NA20540,NA20544,NA20581,NA20585,NA20757,NA20760,NA20769,NA20770,NA20771,NA20773,NA20774,NA20783,NA20785,NA20787,NA20790,NA20792,NA20795,NA20797,NA20798,NA20800,NA20801,NA20804,NA20806,NA20807,NA20808,NA20809,NA20810,NA20811,NA20814,NA20815,NA20816,NA20818,NA20819,NA20826,NA20828 esv2487333 1 5809300 5809440 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5391968 M 1 0 1 "" NA18507 esv2737362 1 5809363 5809622 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6874689,essv6877659 M 96 0 2 "" SSM092,SSM093 esv28776 1 5816533 5818034 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16704,esv10860,esv18182 M 40 0 7 "" NA07045,NA12006,NA12489,NA12878,NA18508,NA18523,NA19147 nsv545172 1 5816560 5817226 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708951 M 17421 0 1 "" esv2737473 1 5816922 5817328 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821161,essv6689249,essv6972307,essv6725838,essv6950533,essv6941765,essv6710564 M 96 0 7 "" SSM023,SSM025,SSM029,SSM036,SSM042,SSM046,SSM079 nsv831203 1 5830030 5967902 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442096,nssv1442107,nssv1442118 M 95 0 3 "" esv2494780 1 5832144 5832579 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5176671 M 1 1 0 "" NA18507 nsv512712 1 5832255 5832378 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625336 M 1 1 0 "" 1 esv1660216 1 5832307 5832307 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4159802 M 2 1 0 "" HuRef nsv545173 1 5833391 6025293 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708952 M 17421 1 0 "" esv2764259 1 5838669 5843898 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004917,essv7004918 M 1109 0 2 "" RW_0235,RW_0272 nsv545174 1 5844658 5971884 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708953 M 17421 0 1 "" nsv518390 1 5846277 5853561 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695820 M 2026 1 0 "" nsv945754 1 5848989 5850865 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751416,nssv1751382,nssv1751353,nssv1751426,nssv1751351,nssv1751393,nssv1751345,nssv1751435,nssv1751417,nssv1751375,nssv1751348,nssv1751406,nssv1751419,nssv1751430,nssv1751346,nssv1751428,nssv1751347,nssv1751379,nssv1751344,nssv1751370,nssv1751425,nssv1751433,nssv1751350,nssv1751386,nssv1751341,nssv1751404,nssv1751357,nssv1751401,nssv1751355,nssv1751363,nssv1751424,nssv1751432,nssv1751349,nssv1751396,nssv1751356,nssv1751397,nssv1751342,nssv1751385,nssv1751421,nssv1751387,nssv1751420,nssv1751405,nssv1751340,nssv1751381,nssv1751358,nssv1751378,nssv1751354,nssv1751367,nssv1751422,nssv1751373,nssv1751352,nssv1751366,nssv1751418,nssv1751339,nssv1751343,nssv1751403,nssv1751372,nssv1751423,nssv1751414,nssv1751412,nssv1751376,nssv1751431,nssv1751394,nssv1751395,nssv1751391,nssv1751359,nssv1751368,nssv1751427,nssv1751377,nssv1751402,nssv1751362,nssv1751409,nssv1751390,nssv1751400,nssv1751398,nssv1751392,nssv1751429,nssv1751407,nssv1751389,nssv1751365,nssv1751361,nssv1751364,nssv1751360,nssv1751434,nssv1751374,nssv1751415,nssv1751384,nssv1751408,nssv1751410,nssv1751380,nssv1751399,nssv1751369,nssv1751383,nssv1751388,nssv1751371,nssv1751411,nssv1751413 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2737584 1 5865192 5865645 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821162,essv6843743,essv6828990,essv6721990 M 96 0 4 "" SSM011,SSM045,SSM079,SSM081 esv2737695 1 5865321 5865433 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6843743 M 96 0 1 "" SSM011 esv2737806 1 5868787 5869449 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6669099,essv6937658 M 96 0 2 "" SSM005,SSM022 nsv825586 1 5873701 5874573 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423942 M 31 0 1 "" NA18582 esv3303661 1 5874226 5874227 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7816202,essv7791894,essv7791442,essv7806879,essv7815947,essv7805383,essv7778061,essv7816951,essv7779695,essv7789668,essv7786270,essv7821646,essv7816412,essv7812099,essv7772554,essv7823099,essv7811898,essv7804333,essv7783838,essv7787396,essv7824790,essv7812609,essv7804836,essv7833753,essv7802590,essv7790170,essv7776436,essv7771311,essv7797541,essv7835328,essv7795754,essv7779858,essv7819420,essv7800612,essv7803116,essv7770850,essv7800312,essv7777643,essv7835194,essv7790786 M 185 40 0 "" NA07000,NA07037,NA10847,NA11881,NA11918,NA11919,NA11992,NA11994,NA11995,NA12006,NA12043,NA12045,NA12144,NA12155,NA12156,NA12249,NA12716,NA12761,NA12812,NA12814,NA12815,NA12878,NA12891,NA12892,NA18499,NA18501,NA18502,NA18511,NA18517,NA18519,NA18523,NA18853,NA18858,NA18907,NA18916,NA19108,NA19114,NA19116,NA19137,NA19190 esv3310166 1 5874230 5874231 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7840521,essv7841130,essv7839898 M 185 3 0 "" NA12878,NA12891,NA12892 esv3339145 1 5874233 5874243 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898496,essv8898508,essv8898486,essv8898485,essv8898502,essv8898510,essv8898497,essv8898500,essv8898501,essv8898517,essv8898494,essv8898509,essv8898493,essv8898504,essv8898495,essv8898513,essv8898516,essv8898490,essv8898511,essv8898484,essv8898519,essv8898512,essv8898506,essv8898515,essv8898489,essv8898518,essv8898487,essv8898498,essv8898505,essv8898488,essv8898499,essv8898507,essv8898491 M 185 33 0 "" NA07000,NA07037,NA10847,NA11881,NA11919,NA11992,NA11994,NA11995,NA12006,NA12043,NA12045,NA12144,NA12155,NA12156,NA12249,NA12716,NA12761,NA18499,NA18501,NA18502,NA18511,NA18517,NA18519,NA18523,NA18853,NA18858,NA18907,NA18916,NA19108,NA19114,NA19116,NA19137,NA19190 esv3427069 1 5874238 5874244 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674045,essv8674044,essv8674041 M 185 3 0 "" NA12878,NA12891,NA12892 esv2737917 1 5884425 5884643 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6950534,essv6679147,essv6910022,essv6718151,essv6839956,essv6789130,essv6913982,essv6902515,essv6853210,essv6668918,essv6692746,essv6846990,essv6871702,essv6946477,essv6766527,essv6776922,essv6892305 M 96 0 17 "" SSM013,SSM015,SSM016,SSM024,SSM025,SSM031,SSM033,SSM037,SSM044,SSM064,SSM067,SSM070,SSM084,SSM086,SSM087,SSM091,SSM098 esv2763437 1 5888617 5958331 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7030745 M 1109 0 1 "" SW_1304 nsv831314 1 5889409 6062997 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442151,nssv1442129,nssv1442140,nssv1442162 M 95 0 4 "" nsv743 1 5902069 5947327 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9178 M 9 0 1 "" NA12156 nsv545175 1 5947386 5993570 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708954 M 17421 0 1 "" nsv506919 1 5975546 5981546 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623262 M 4 0 0 "" NA18994 esv3395207 1 5977293 5977969 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652093 M 185 1 0 "" NA19240 esv33437 1 5977509 5977977 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv92517,essv99200,essv94307,essv101160,essv92840,essv97100,essv94798,essv93021,essv97813,essv94480,essv100607,essv93510,essv101040,essv95744 M 51 14 0 "" 21618,21693,21791,21808,21837,21841,21863,21932,21939,22075,22128,22233,22275,22298 esv3373910 1 5977853 5978038 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808973 M 185 1 0 "" NA12878 nsv520207 1 5982874 5986204 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697281 M 2026 0 1 "" nsv953994 1 5992941 6061340 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001623 M 1 0 1 "" BILGI_BIOE esv2470104 1 6004651 6006928 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5382298 M 1 0 1 "" NA18507 esv22772 1 6004690 6006873 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv19261,esv17376,esv15196 M 40 27 1 "" NA06985,NA07037,NA07045,NA11894,NA11993,NA12004,NA12006,NA12156,NA12287,NA12414,NA12749,NA12828,NA12878,NA15510,NA18505,NA18508,NA18511,NA18517,NA18858,NA18861,NA18909,NA18916,NA19099,NA19114,NA19147,NA19190,NA19225,NA19240 esv2738028 1 6004718 6005851 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821163,essv6686144,essv6972308,essv6843871,essv6863937,essv6954715,essv6738796,essv6898594,essv6789131,essv6906089,essv6816568,essv6733470,essv6941766,essv6668919,essv6846991,essv6853211,essv6721991,essv6961533 M 96 0 18 "" SSM014,SSM023,SSM026,SSM027,SSM029,SSM031,SSM035,SSM045,SSM049,SSM052,SSM070,SSM078,SSM079,SSM085,SSM086,SSM087,SSM089,SSM100 dgv65n54 1 6005052 6005754 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545178,nsv545177,nsv545176 M 17421 0 4 "" dgv66n54 1 6005052 6006039 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545180,nsv545191,nsv545179 M 17421 3 0 "" dgv67n54 1 6005052 6006192 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545192,nsv545181,nsv545183,nsv545182,nsv545193 M 17421 0 6 "" nsv545186 1 6005052 6006560 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708970,nssv708971 M 17421 1 1 "" dgv68n54 1 6005052 6006576 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545184,nsv545185,nsv545188,nsv545187,nsv545194,nsv545195,nsv545204 M 17421 19 0 "" dgv69n54 1 6005212 6005812 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545190,nsv545189 M 17421 2 0 "" nsv545196 1 6005212 6007580 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708990,nssv708989 M 17421 0 2 "" nsv159264 1 6005233 6005430 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177842 M 24 "" dgv70n54 1 6005263 6006576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545202,nsv545201,nsv545197,nsv545203 M 17421 0 5 "" nsv545199 1 6005366 6005987 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv708993 M 17421 0 1 "" dgv71n54 1 6005366 6006039 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545200,nsv545198 M 17421 2 0 "" nsv545205 1 6005579 6006243 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709001 M 17421 1 0 "" dgv72n54 1 6005579 6006576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545209,nsv545208,nsv545207,nsv545206,nsv545211 M 17421 0 6 "" nsv545210 1 6005689 6006576 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709007,nssv709008 M 17421 2 0 "" esv7234 1 6005731 6006717 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29675 M 1 0 0 "" nsv511675 1 6005797 6006740 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626313 M 1 0 1 "" 1 esv2738139 1 6005820 6006039 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6718787 M 96 0 1 "" SSM007 esv2738250 1 6005869 6006556 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6913984,essv6836178,essv6780849,essv6773422,essv6769505,essv6843872,essv6863938,essv6725839,essv6793267,essv6679148,essv6910023,essv6954716,essv6696980,essv6913983,essv6921699,essv6666885,essv6789133,essv6950073,essv6797433,essv6839957,essv6824966,essv6895834,essv6967912,essv6807360,essv6941767,essv6929045,essv6853212,essv6714226 M 96 0 27 "" SSM004,SSM015,SSM016,SSM018,SSM020,SSM023,SSM026,SSM028,SSM030,SSM033,SSM038,SSM043,SSM046,SSM065,SSM066,SSM068,SSM070,SSM071,SSM072,SSM075,SSM080,SSM083,SSM084,SSM085,SSM087,SSM089,SSM099 nsv545212 1 6005870 6006406 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709010 M 17421 0 1 "" dgv73n54 1 6005926 6006576 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545220,nsv545219,nsv545216,nsv545215,nsv545213,nsv545214,nsv545221 M 17421 73 40 "" nsv545217 1 6005926 6007580 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709090,nssv709089 M 17421 2 0 "" dgv74n54 1 6005926 6020318 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545218,nsv545223,nsv545227 M 17421 3 0 "" nsv545222 1 6005987 6007580 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709127 M 17421 0 1 "" nsv545224 1 6006039 6006560 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709130,nssv709129 M 17421 0 2 "" nsv511127 1 6006039 6010810 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626143 M 1 0 1 "" 1 nsv545225 1 6006090 6006576 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709132,nssv709133,nssv709134,nssv709131 M 17421 4 0 "" nsv545226 1 6006243 6006560 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709137,nssv709136,nssv709138,nssv709135 M 17421 0 4 "" esv2738362 1 6006394 6006561 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972309 M 96 0 1 "" SSM029 nsv545228 1 6006406 6006560 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709140 M 17421 0 1 "" esv2738473 1 6006668 6006847 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6813156 M 96 0 1 "" SSM077 esv2738584 1 6012065 6012896 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933292,essv6972310,essv6703848,essv6885973,essv6784978,essv6846992,essv6733471,essv6668920,essv6776923 M 96 0 9 "" SSM021,SSM029,SSM031,SSM040,SSM049,SSM067,SSM069,SSM086,SSM096 esv2668412 1 6012134 6012500 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6544636,essv6237773,essv5922487,essv6501198,essv5695092,essv6335002,essv5886683,essv5563282,essv5528295,essv5865050,essv6188297,essv5520884,essv6129318,essv5588220,essv6255474,essv5636685,essv5877569 M 1151 0 17 "" HG00284,HG00328,HG00342,HG00437,HG00543,HG01133,HG01357,HG01390,NA18572,NA18924,NA19374,NA19379,NA19391,NA19428,NA19746,NA19786,NA20314 esv2671721 1 6012135 6012732 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5497657,essv5428863,essv5928633,essv5665100,essv5655454,essv6427608,essv5997402,essv5669584,essv5958284,essv5724721,essv6540799,essv6382629,essv6429959,essv5767011,essv6118327,essv6129056,essv5941011,essv5396217,essv6349389,essv5881206,essv6304897,essv5788966,essv5714136,essv6255955,essv5645214,essv5907730,essv6217674,essv5998533,essv6376855,essv6168202,essv6148521,essv6490716,essv6380438,essv5467304,essv6121818,essv6216628,essv5800765,essv6376345,essv5707787,essv5752732,essv5552528,essv5587867,essv5753506,essv6164111,essv5730880,essv6072292,essv6187079,essv5705359,essv6371370,essv5605963,essv6081217,essv6169655,essv6573525,essv5691431,essv5774618,essv6532235,essv6094817,essv6261806,essv6498118,essv6592445,essv6505577,essv6501200,essv5613898,essv5845916,essv6529368,essv5909974,essv5460614,essv6204063,essv6060604,essv6229880,essv5829542,essv6447871,essv5677246,essv6336381,essv6429236,essv6594356,essv5714321,essv5679535,essv6439716,essv6106545,essv6223863,essv6128759,essv5407886,essv5742080,essv5513983,essv6261835,essv5836894,essv6492760,essv5946793,essv6223880,essv6465287,essv6086953,essv6119926,essv6155134,essv6068361,essv6448961,essv6491505,essv6282855,essv5932588,essv6020623,essv6072530,essv5764384,essv6586272,essv6580197,essv6541060,essv5788028,essv5569094,essv5475755,essv5746389,essv5842204,essv6088037,essv6399264,essv5996087,essv6112224,essv6080909,essv5509769,essv5636110,essv5445107,essv6020546,essv5843395,essv5531345,essv5884490,essv6508076,essv5474868,essv6103012,essv6513052,essv6259723,essv5474452,essv6146458,essv5416587,essv6514803,essv6192880,essv5413546,essv6452048,essv5506435,essv6585620,essv6497354,essv6437441,essv5454081,essv5637574,essv6361399,essv5965967,essv5871453,essv5880362,essv6195668,essv6409198,essv6113253,essv6506890,essv6142865,essv5512966,essv6442096,essv6433245,essv6157504,essv6227383,essv6482164,essv5611477,essv6103095,essv6165747,essv5633336,essv6298507,essv6165749,essv5425976,essv5883448,essv6139787,essv6114052,essv5558169,essv5983105,essv5402443,essv6556052,essv5616878,essv6372612,essv5864460,essv5971083,essv6493493,essv6139989,essv5943253,essv5489757,essv5740671,essv5918927,essv6008020,essv6040350,essv5415000,essv6141669,essv6416025,essv5432446,essv6377173,essv6480699,essv5406403,essv5621908,essv6061149,essv6200679,essv6210340,essv5407413,essv5545770,essv6269635,essv5415051,essv5909976,essv6553754,essv5575680,essv6248870,essv6062214,essv6138404,essv6057781,essv5837146,essv6567015,essv5632013,essv5673767,essv6393423,essv6548910,essv5657029,essv6397638,essv5469579,essv6473009,essv5645205,essv5930850,essv6206244,essv5674310,essv5402741,essv5617025,essv5424572,essv6282381,essv5453827,essv6073435,essv5757120,essv6464469,essv6334902,essv6297003,essv6148472,essv6397243,essv5995311,essv6297659,essv6055531,essv6126277,essv6502693,essv5889228,essv6551773,essv6345185,essv5978133,essv6588591,essv6107623,essv6265889,essv5459906,essv5617548,essv5845242 M 1151 0 244 "" HG00108,HG00111,HG00123,HG00124,HG00125,HG00131,HG00136,HG00137,HG00138,HG00139,HG00140,HG00142,HG00154,HG00232,HG00236,HG00237,HG00246,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00260,HG00261,HG00271,HG00272,HG00273,HG00274,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00309,HG00310,HG00313,HG00315,HG00318,HG00319,HG00320,HG00323,HG00324,HG00325,HG00326,HG00327,HG00328,HG00330,HG00334,HG00335,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00345,HG00346,HG00375,HG00418,HG00427,HG00428,HG00436,HG00437,HG00443,HG00449,HG00463,HG00464,HG00473,HG00479,HG00500,HG00501,HG00512,HG00513,HG00525,HG00533,HG00534,HG00537,HG00543,HG00557,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00607,HG00608,HG00613,HG00614,HG00619,HG00620,HG00650,HG00651,HG00654,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00707,HG00708,HG00740,HG01048,HG01051,HG01052,HG01055,HG01060,HG01066,HG01067,HG01070,HG01072,HG01073,HG01079,HG01080,HG01082,HG01083,HG01102,HG01108,HG01113,HG01170,HG01171,HG01173,HG01174,HG01188,HG01334,HG01350,HG01351,HG01353,HG01354,HG01359,HG01365,HG01366,HG01377,HG01383,HG01390,HG01437,HG01488,HG01518,NA11831,NA12154,NA12249,NA18530,NA18534,NA18543,NA18549,NA18557,NA18559,NA18602,NA18606,NA18609,NA18613,NA18620,NA18621,NA18623,NA18632,NA18636,NA18638,NA19190,NA19197,NA19223,NA19324,NA19376,NA19379,NA19383,NA19385,NA19394,NA19401,NA19404,NA19428,NA19436,NA19452,NA19457,NA19463,NA19648,NA19651,NA19652,NA19654,NA19655,NA19657,NA19660,NA19661,NA19663,NA19664,NA19675,NA19676,NA19678,NA19679,NA19681,NA19682,NA19684,NA19685,NA19712,NA19716,NA19717,NA19719,NA19720,NA19723,NA19725,NA19726,NA19728,NA19729,NA19731,NA19732,NA19746,NA19749,NA19750,NA19755,NA19756,NA19758,NA19759,NA19762,NA19770,NA19773,NA19774,NA19776,NA19779,NA19780,NA19782,NA19785,NA19788,NA19789,NA19818,NA19920,NA20126,NA20296,NA20322,NA20356 esv2738695 1 6012173 6012509 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6703848,essv6784978 M 96 0 2 "" SSM040,SSM069 esv2738806 1 6012313 6012572 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933292,essv6972310,essv6885973,essv6668920,essv6846992,essv6776923 M 96 0 6 "" SSM021,SSM029,SSM031,SSM067,SSM086,SSM096 esv2738917 1 6025653 6026117 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6910024,essv6804391,essv6839958 M 96 0 3 "" SSM015,SSM074,SSM084 esv2739028 1 6043231 6043337 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6699586 M 96 0 1 "" SSM039 nsv461283 1 6048317 6124032 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537694 M 1557 0 1 "" HGDP00491 nsv545229 1 6048317 6124032 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173650 M 17421 0 1 "" HGDP00491 dgv75n54 1 6081265 6144206 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545230,nsv545231 M 17421 0 2 "" nsv470689 1 6089062 6173513 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547691,nssv547693,nssv547692,nssv547694 M 443 0 4 "" HGDP00288,HGDP00323,HGDP00657,HGDP01397 nsv825697 1 6101700 6102480 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431963 M 31 1 0 "" NA18972 nsv545232 1 6104348 6108362 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709143 M 17421 1 0 "" esv21998 1 6106658 6109243 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17786 M 40 1 0 "" NA06985 dgv76n54 1 6107061 6108970 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545233,nsv545234 M 17421 5 0 "" esv2739139 1 6107236 6107408 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821164,essv6941768,essv6721992,essv6853213,essv6813157 M 96 0 5 "" SSM023,SSM045,SSM077,SSM079,SSM087 esv2676924 1 6107649 6108520 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5397445 M 1151 0 1 "" HG00476 nsv545235 1 6107849 6109035 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709149 M 17421 0 1 "" nsv831425 1 6129291 6264418 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442185,nssv1442173,nssv1442196 M 95 0 3 "" nsv818555 1 6130155 6152810 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417552 M 112 0 1 "" NA18971 nsv854 1 6131205 6176083 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7151 M 9 0 1 "" NA12156 esv3383496 1 6149005 6150303 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692396 M 185 1 0 "" NA19239 esv2739250 1 6154898 6155126 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6748154 M 96 0 1 "" SSM008 esv2739361 1 6154912 6155373 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6679149,essv6846993,essv6699588 M 96 0 3 "" SSM033,SSM039,SSM086 esv2739473 1 6159776 6160535 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6874690,essv6780850,essv6695565,essv6832585,essv6913986,essv6972311,essv6773423,essv6718798,essv6742123,essv6910025,essv6917409,essv6954717,essv6789134,essv6863939,essv6679150,essv6950535,essv6921700,essv6738797,essv6937659,essv6797434,essv6885974,essv6967913,essv6747762,essv6925674,essv6733472,essv6801607,essv6761844,essv6784465,essv6714227,essv6750583,essv6699589,essv6961534,essv6892306,essv6813158,essv6877660,essv6776924,essv6859169 M 96 0 37 "" SSM006,SSM007,SSM009,SSM015,SSM016,SSM017,SSM018,SSM019,SSM022,SSM025,SSM026,SSM027,SSM028,SSM029,SSM033,SSM039,SSM043,SSM049,SSM052,SSM053,SSM056,SSM057,SSM062,SSM066,SSM067,SSM068,SSM070,SSM072,SSM073,SSM077,SSM082,SSM088,SSM089,SSM092,SSM093,SSM096,SSM098 esv2739584 1 6160138 6160444 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6695565,essv6874690,essv6780850,essv6832585,essv6773423,essv6972311,essv6913986,essv6718798,essv6910025,essv6863939,essv6950535,essv6954717,essv6937659,essv6797434,essv6885974,essv6789134,essv6925674,essv6967913,essv6801607,essv6761844,essv6813158,essv6699589,essv6714227,essv6892306,essv6961534,essv6877660,essv6750583,essv6859169,essv6776924 M 96 0 29 "" SSM006,SSM007,SSM015,SSM016,SSM019,SSM022,SSM025,SSM026,SSM027,SSM028,SSM029,SSM039,SSM043,SSM057,SSM062,SSM066,SSM067,SSM068,SSM070,SSM072,SSM073,SSM077,SSM082,SSM088,SSM089,SSM092,SSM093,SSM096,SSM098 nsv545236 1 6161915 6262876 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709150 M 17421 0 1 "" nsv945755 1 6185921 6187830 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750828,nssv1751473,nssv1751450,nssv1750798,nssv1750822,nssv1751459,nssv1750821,nssv1750809,nssv1751442,nssv1750795,nssv1751448,nssv1750799,nssv1751445,nssv1751466,nssv1750826,nssv1751468,nssv1751447,nssv1751436,nssv1751438,nssv1750808,nssv1751446,nssv1750813,nssv1750824,nssv1750816,nssv1751454,nssv1751467,nssv1751444,nssv1750794,nssv1751443,nssv1750835,nssv1750825,nssv1750807,nssv1751439,nssv1750814,nssv1751452,nssv1750830,nssv1751437,nssv1750785,nssv1751455,nssv1750806,nssv1751451,nssv1750819,nssv1751441,nssv1750803,nssv1751453,nssv1751464,nssv1750820,nssv1751475,nssv1750823,nssv1750827,nssv1751449,nssv1751463,nssv1750829,nssv1751470,nssv1751440,nssv1750797,nssv1750801,nssv1751472,nssv1750789,nssv1750805,nssv1750815,nssv1750787,nssv1750838,nssv1750810,nssv1750788,nssv1750834,nssv1750796,nssv1750802,nssv1751465,nssv1750832,nssv1751469,nssv1750783,nssv1750836,nssv1750811,nssv1750790,nssv1750793,nssv1750791,nssv1750786,nssv1751456,nssv1751462,nssv1750818,nssv1751474,nssv1750817,nssv1750784,nssv1750837,nssv1750800,nssv1750839,nssv1750792,nssv1750812,nssv1751458,nssv1750833,nssv1750804,nssv1751471,nssv1751457,nssv1751460,nssv1750831,nssv1751461 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv954005 1 6203341 6211740 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001634 M 1 0 1 "" BILGI_BIOE dgv8n67 1 6220621 6264303 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv825808,nsv825919 M 31 2 0 "" AK6,NA18969 nsv508825 1 6221275 6286549 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623771 M 4 1 0 "" NA18994 nsv545237 1 6240990 6250176 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709151 M 17421 0 1 "" nsv526371 1 6247195 6307159 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702667 M 2026 0 1 "" nsv545238 1 6248510 6257923 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709152 M 17421 0 1 "" nsv965 1 6253120 6297822 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7223 M 9 0 1 "" NA12156 nsv519253 1 6262876 6269955 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696748 M 2026 0 1 "" nsv545239 1 6262876 6289815 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709153 M 17421 0 1 "" esv2739695 1 6265117 6265457 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6793268,essv6937660 M 96 0 2 "" SSM022,SSM071 esv2739806 1 6265263 6265392 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6937660 M 96 0 1 "" SSM022 esv2678878 1 6300524 6300639 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5603474,essv6522014,essv5646124,essv6055933,essv6501160,essv6440921,essv6274070,essv5445152,essv5740501,essv6353190,essv6209670,essv5770630,essv5629280,essv6320069,essv6301497,essv6126119,essv6490833,essv6580549,essv5774476,essv5713936,essv6331114,essv5829830,essv5832694,essv5929484,essv5881636,essv6433661,essv5566219,essv6406490,essv6251253,essv6002646,essv6356107,essv6061635,essv5581840,essv5655032,essv5889294,essv6068092,essv6430960,essv6252739,essv6502128,essv6134833,essv5933190,essv5953943,essv6021622,essv5590205,essv5616662,essv6349142,essv6206653,essv5874369,essv6106893,essv5960431,essv6075688,essv6476379,essv5573056,essv6425276,essv5912815,essv6517152 M 1151 0 56 "" HG00143,HG00146,HG00250,HG00421,HG00436,HG00513,HG00689,HG00692,HG01354,HG01521,NA07051,NA07346,NA11830,NA12058,NA12154,NA12400,NA18486,NA18520,NA18565,NA18570,NA18599,NA18615,NA18873,NA18963,NA18984,NA18986,NA18987,NA18988,NA19004,NA19007,NA19055,NA19057,NA19064,NA19065,NA19067,NA19213,NA19350,NA19439,NA19676,NA19707,NA19780,NA19788,NA19819,NA19834,NA19835,NA19916,NA19920,NA19982,NA20524,NA20533,NA20539,NA20752,NA20757,NA20769,NA20783,NA20787 esv24092 1 6306259 6308833 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18277 M 40 0 1 "" NA19240 nsv522013 1 6307159 6396412 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694782 M 2026 0 1 "" esv2739917 1 6307639 6308204 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6780851,essv6917410,essv6950084,essv6801608,essv6967914,essv6859170 M 96 0 6 "" SSM004,SSM017,SSM028,SSM068,SSM073,SSM088 esv2740028 1 6307810 6307863 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6859170 M 96 0 1 "" SSM088 nsv521525 1 6319547 6327724 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698142 M 2026 0 1 "" nsv1076 1 6325290 6369522 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2226 M 9 0 1 "" NA18555 nsv477455 1 6342293 6342293 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013155 M 9 1 0 "" NA18517 nsv523989 1 6351154 6396412 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699845 M 2026 0 1 "" nsv545240 1 6351154 6512115 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709154 M 17421 0 1 "" dgv11e199 1 6374403 6385293 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2665730,esv2673327 M 1151 0 8 "" HG00138,HG00159,HG00246,HG00325,HG00684,HG01140,NA12342,NA20504 nsv545241 1 6377482 6385308 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709155 M 17421 0 1 "" esv2678076 1 6378109 6385835 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6110969,essv5814488,essv6323711,essv5579207,essv5746308,essv5712074,essv6270116,essv6038179,essv6083095,essv5574356,essv5499015,essv6180877,essv5621209 M 1151 0 13 "" HG00138,HG00159,HG00176,HG00246,HG00325,HG00345,HG01140,NA12044,NA12046,NA12342,NA18558,NA19914,NA20504 esv21684 1 6378134 6385775 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12785 M 40 0 1 "" NA12044 dgv77n54 1 6379308 6385746 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545245,nsv545244,nsv545243,nsv545242,nsv545250,nsv545246,nsv545249,nsv545248,nsv545247 M 17421 0 39 "" dgv78n54 1 6381833 6385746 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545251,nsv545252 M 17421 0 5 "" dgv79n54 1 6384218 6385692 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545255,nsv545254,nsv545253,nsv545256 M 17421 0 5 "" nsv545257 1 6384907 6385746 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709205 M 17421 0 1 "" dgv2n27 1 6396412 6512115 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv461839,nsv461728,nsv461950,nsv461616 M 1557 0 4 "" 1780862021_A,HGDP00814,NINDS_66,NINDS_98 dgv80n54 1 6396412 6512115 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545260,nsv545259,nsv545261,nsv545258,nsv545263,nsv545262 M 17421 0 8 "" 1780862021_A,HGDP00814,NINDS_66,NINDS_98 esv2678507 1 6398576 6399550 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5761716,essv5518920,essv5461566,essv5695343,essv6395166,essv5544144,essv5547221,essv6014139 M 1151 0 8 "" NA18489,NA18853,NA19247,NA19331,NA19332,NA19428,NA19472,NA19664 esv29840 1 6398793 6399491 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11459 M 40 0 2 "" NA18517,NA18523 nsv508836 1 6406896 6501029 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619766 M 4 1 0 "" NA10860 nsv954048 1 6414241 6500740 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001645 M 1 0 1 "" BILGI_BIOE esv25412 1 6416568 6461456 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv14500 M 40 1 2 "" NA12489,NA18916,NA19147 nsv7880 1 6417968 6611914 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv24605,nssv21438,nssv11789 M 31 1 2 "" NA18517,NA18564,NA19173 nsv482179 1 6424788 6460943 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558540 M 1 1 0 "" KB1 nsv831536 1 6429326 6605343 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442218,nssv1442207,nssv1442229,nssv1442240,nssv1442251,nssv1442262,nssv1442273,nssv1442284,nssv1442307,nssv1442296,nssv1442318,nssv1442329,nssv1442340,nssv1442351,nssv1442362,nssv1442373 M 95 0 16 "" dgv9n67 1 6429866 6464430 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv826030,nsv826142 M 31 2 0 "" NA18564,NA18969 nsv470690 1 6434339 6512115 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547695 M 443 1 0 "" HGDP00553 nsv545264 1 6457119 6492439 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709210 M 17421 0 1 "" nsv470691 1 6460251 6517705 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547696 M 443 0 1 "" HGDP00978 nsv462061 1 6463370 6520836 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538332 M 1557 0 1 "" HGDP00614 nsv545265 1 6463370 6520836 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173655 M 17421 0 1 "" HGDP00614 nsv545266 1 6464441 6470375 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709211 M 17421 0 1 "" nsv545267 1 6466264 6504096 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709212 M 17421 0 1 "" nsv1187 1 6487784 6507405 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3152 M 9 1 0 "" NA12878 nsv545268 1 6490316 6578004 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709213 M 17421 0 1 "" nsv473388 1 6499119 6499119 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011403 M 9 1 0 "" NA19129 nsv831647 1 6525809 6587530 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442462,nssv1442473,nssv1442484,nssv1442495,nssv1442506,nssv1442529,nssv1442540,nssv1442518,nssv1442395,nssv1442384,nssv1442407,nssv1442418,nssv1442429,nssv1442440,nssv1442451 M 95 0 15 "" nsv545269 1 6546548 6630080 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709214 M 17421 0 1 "" esv1249079 1 6558912 6558912 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4064753 M 2 1 0 "" HuRef esv3302807 1 6560479 6570259 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7733376,essv7736227,essv7734013 M 185 0 0 "" NA18517,NA18871,NA18945 nsv476608 1 6577086 6577086 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012014 M 9 1 0 "" NA12878 nsv955151 1 6582241 6598140 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001656 M 1 0 1 "" BILGI_BIOE nsv472111 1 6588500 6588500 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011064 M 9 1 0 "" NA18555 nsv826253 1 6600185 6628643 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426369 M 31 1 0 "" AK6 nsv955152 1 6613541 6615140 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001667 M 1 0 1 "" BILGI_BIOE nsv437199 1 6642091 6743687 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467080 M 60 0 1 "" NA19205 nsv945756 1 6666138 6667048 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750926,nssv1750877,nssv1750845,nssv1750888,nssv1750843,nssv1750892,nssv1750852,nssv1750873,nssv1750918,nssv1750911,nssv1750849,nssv1750881,nssv1750925,nssv1750866,nssv1750923,nssv1750860,nssv1750919,nssv1750869,nssv1750847,nssv1750882,nssv1750920,nssv1750868,nssv1750851,nssv1750928,nssv1750842,nssv1750934,nssv1750856,nssv1750889,nssv1750857,nssv1750874,nssv1750858,nssv1750903,nssv1750921,nssv1750908,nssv1750850,nssv1750893,nssv1750859,nssv1750904,nssv1750841,nssv1750840,nssv1750922,nssv1750933,nssv1750846,nssv1750895,nssv1750848,nssv1750913,nssv1750855,nssv1750864,nssv1750853,nssv1750931,nssv1750917,nssv1750916,nssv1750844,nssv1750932,nssv1750854,nssv1750867,nssv1750915,nssv1750896,nssv1750927,nssv1750914,nssv1750891,nssv1750935,nssv1750883,nssv1750900,nssv1750870,nssv1750898,nssv1750907,nssv1750909,nssv1750899,nssv1750861,nssv1750872,nssv1750897,nssv1750894,nssv1750875,nssv1750885,nssv1750886,nssv1750929,nssv1750930,nssv1750865,nssv1750884,nssv1750912,nssv1750880,nssv1750905,nssv1750876,nssv1750863,nssv1750902,nssv1750890,nssv1750871,nssv1750901,nssv1750887,nssv1750878,nssv1750924,nssv1750879,nssv1750906,nssv1750936,nssv1750910,nssv1750862 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2640779 1 6668547 6669813 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5234545 M 1 0 1 "" NA18507 esv2237641 1 6669158 6669727 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4834781 M 1 0 1 "" NA18507 nsv1298 1 6678148 6698392 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4861 M 9 1 0 "" NA19129 nsv525013 1 6696374 6701201 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701050 M 2026 0 1 "" esv2660484 1 6702265 6703669 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6494991 M 1151 0 1 "" NA19916 esv28409 1 6702566 6703436 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv18257 M 40 0 1 "" NA18909 esv28362 1 6727456 6733335 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14015 M 40 1 0 "" NA19225 esv2658131 1 6731683 6733060 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6536392,essv6579898 M 1151 0 2 "" NA19373,NA19393 nsv512713 1 6742447 6742742 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625337 M 1 1 0 "" 1 esv1464790 1 6742561 6742561 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3709090 M 2 1 0 "" HuRef esv1979443 1 6798482 6798911 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4873252 M 1 0 1 "" NA18507 esv2740139 1 6798493 6798804 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821165,essv6689250,essv6721993,essv6836179,essv6780852,essv6880412,essv6972312,essv6793269,essv6703849,essv6910026,essv6863940,essv6954719,essv6921701,essv6718152,essv6707251,essv6784979,essv6916551,essv6804392,essv6797435,essv6895835,essv6871703,essv6801609,essv6902516,essv6807361,essv6925675,essv6800487,essv6853214,essv6710566,essv6946478,essv6766528,essv6714228,essv6813159 M 96 0 32 "" SSM002,SSM003,SSM013,SSM015,SSM018,SSM019,SSM024,SSM026,SSM029,SSM036,SSM040,SSM041,SSM042,SSM043,SSM044,SSM045,SSM064,SSM068,SSM069,SSM071,SSM072,SSM073,SSM074,SSM075,SSM077,SSM079,SSM083,SSM087,SSM089,SSM091,SSM094,SSM099 nsv955443 1 6798591 6798760 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000445 M 1 0 1 "" BILGI_BIOE esv1086035 1 6798592 6798771 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3780745 M 2 0 1 "" HuRef esv999225 1 6798596 6798772 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3581910 M 3 0 1 "" HuRef esv25521 1 6801285 6801858 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv20468 M 40 0 1 "" NA18909 esv2740250 1 6916977 6917442 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6929046 M 96 0 1 "" SSM020 esv2556451 1 6940356 6941186 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5345164 M 1 1 0 "" NA18507 esv3351162 1 6940760 6940979 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652095 M 185 1 0 "" NA19240 nsv512714 1 6940883 6940939 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625338 M 1 1 0 "" 1 esv1590628 1 6940935 6940935 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4106152 M 2 1 0 "" HuRef dgv81n54 1 6954384 6964162 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545271,nsv545270,nsv545272 M 17421 3 0 "" nsv545273 1 6956049 6963181 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709218 M 17421 0 1 "" dgv82n54 1 6960567 6963434 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545276,nsv545274,nsv545275 M 17421 0 3 "" esv28688 1 6962608 6963469 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12322 M 40 0 2 "" NA12489,NA18517 dgv83n54 1 6962639 6963232 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545279,nsv545278,nsv545284,nsv545285 M 17421 0 21 "" dgv84n54 1 6962639 6963271 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545286,nsv545277 M 17421 2 0 "" dgv85n54 1 6962639 6963434 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545290,nsv545288,nsv545280,nsv545281,nsv545282 M 17421 145 45 "" nsv545283 1 6962639 6964162 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709433,nssv709431,nssv709430,nssv709429,nssv709428,nssv709426,nssv709432,nssv709427 M 17421 4 4 "" dgv86n54 1 6962690 6963378 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545287,nsv545292,nsv545294 M 17421 0 9 "" nsv545289 1 6962690 6964162 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709444,nssv709443 M 17421 0 2 "" dgv87n54 1 6962714 6963434 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545293,nsv545291,nsv545295 M 17421 3 0 "" nsv545296 1 6963127 6963232 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709457 M 17421 0 1 "" nsv545297 1 6963127 6963378 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709458,nssv709459 M 17421 0 2 "" nsv545298 1 6963232 6963378 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709460 M 17421 0 1 "" esv2482000 1 6983570 6984639 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5354983 M 1 1 0 "" NA18507 esv988826 1 7018143 7018143 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566621 M 3 1 0 "" HuRef nsv519205 1 7030156 7039600 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696693 M 2026 0 1 "" esv990496 1 7087331 7099723 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563883 M 3 0 1 "" HuRef esv2740361 1 7101844 7104304 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6710567,essv6946479 M 96 0 2 "" SSM024,SSM042 dgv33e59 1 7103105 7104603 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3439401,esv3449661,esv3448182 M 185 3 0 "" NA19238,NA19239,NA19240 esv2740472 1 7103431 7104062 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6946479 M 96 0 1 "" SSM024 esv2662615 1 7103518 7104297 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6103376,essv6284032,essv5411888,essv6539568,essv5772741,essv6486681,essv5661113,essv6417621,essv5680446,essv6400012,essv5847007,essv6420161,essv5530572,essv6541165,essv6136763,essv6313096,essv5687811,essv6404374,essv5809862,essv6585810,essv6262940,essv6425611,essv5700612,essv6417169,essv6221904,essv6342382,essv6252777,essv6509693,essv5516164,essv6336524,essv5825273,essv6326297,essv5725971,essv6414758,essv5976154,essv6552907,essv6236961,essv6280102,essv5700801,essv6436368,essv6220693,essv6522841,essv6021253,essv6508293,essv5698996,essv6349849,essv5680344,essv6297745,essv5779219,essv6475526,essv5577675,essv6495505,essv5695078,essv6570341,essv5884386,essv6359511,essv5635531,essv6581149,essv5640023,essv6510586,essv6049724,essv6471790,essv5751967,essv6392068,essv6024967,essv6550476,essv5874213,essv6478572,essv5727031,essv6443521,essv5798197,essv6320692,essv6246335,essv6572989,essv5437676,essv6400365,essv5743362,essv6390151,essv5939466,essv6400414,essv6031455,essv6542582,essv6236128,essv6339704,essv6088475,essv6446225,essv6249994,essv6477117,essv5778939,essv6464000,essv5700439,essv6340463,essv6081756,essv6524729,essv6256694,essv6493628,essv5817572,essv6551273,essv5646313,essv6389571,essv5714957,essv6291866,essv5910254,essv5905901,essv5747126,essv5693690,essv5834837,essv6049204,essv5922783,essv5824214,essv5914269,essv5816558,essv6118440,essv6179144,essv6059252,essv6239833,essv6082374,essv5934358,essv6083569,essv5765955,essv5773932,essv6091553,essv5443323,essv5582425,essv5434901,essv5846026,essv5644272,essv5559070,essv5931053,essv6157214,essv5957709,essv6038926,essv6142381,essv5449031,essv5670913,essv5608651,essv5604783,essv6058189,essv5435741,essv5847072,essv5865612,essv6201308,essv6058443,essv6133354,essv5474307,essv5586530,essv5567262,essv6267698,essv6021950,essv5921160,essv6106189,essv6045115,essv5457577,essv6038791,essv6048810,essv6263300,essv6237058,essv6062663,essv5458066,essv6001304,essv6213322,essv5996400,essv6235026,essv5705913,essv5586182,essv6035854,essv6003699,essv5614360,essv5396873,essv5424552,essv6002793,essv6034742,essv6170669,essv5640425,essv5432162,essv6105011,essv5886921,essv6179353,essv6077806,essv5562667,essv6260308,essv5969769,essv5407192,essv5969894,essv6120183,essv5969131,essv6206663,essv6117906,essv5637918,essv5508229,essv6071423,essv5622472,essv5467949,essv5669141,essv5435379,essv5570529,essv5546239,essv5506112,essv5614526,essv5610386,essv5924077,essv6031050,essv5545314,essv5988896,essv6080785,essv6151036,essv5643917 M 1151 0 207 "" HG00106,HG00123,HG00133,HG00138,HG00140,HG00142,HG00148,HG00149,HG00154,HG00157,HG00174,HG00186,HG00187,HG00233,HG00242,HG00245,HG00262,HG00264,HG00272,HG00278,HG00308,HG00311,HG00312,HG00326,HG00336,HG00338,HG00339,HG00342,HG00357,HG00367,HG00380,HG00449,HG00478,HG00479,HG00533,HG00536,HG00537,HG00551,HG00581,HG00589,HG00590,HG00607,HG00626,HG00637,HG00641,HG00657,HG00684,HG00699,HG00701,HG00702,HG00707,HG00736,HG00737,HG00740,HG01048,HG01060,HG01080,HG01101,HG01125,HG01133,HG01134,HG01136,HG01149,HG01170,HG01254,HG01354,HG01365,HG01377,HG01384,HG01491,HG01497,HG01551,NA06989,NA11830,NA12045,NA12155,NA12272,NA12342,NA12347,NA12348,NA12778,NA18488,NA18489,NA18516,NA18519,NA18520,NA18543,NA18550,NA18564,NA18567,NA18611,NA18613,NA18616,NA18617,NA18631,NA18634,NA18637,NA18853,NA18856,NA18867,NA18873,NA18874,NA18908,NA18945,NA18959,NA18963,NA18964,NA18977,NA18982,NA18986,NA18988,NA19007,NA19010,NA19012,NA19060,NA19062,NA19079,NA19084,NA19092,NA19107,NA19130,NA19172,NA19189,NA19213,NA19223,NA19247,NA19248,NA19256,NA19312,NA19313,NA19315,NA19324,NA19327,NA19331,NA19334,NA19346,NA19350,NA19360,NA19376,NA19382,NA19384,NA19390,NA19396,NA19397,NA19428,NA19431,NA19435,NA19436,NA19439,NA19440,NA19443,NA19445,NA19448,NA19449,NA19452,NA19457,NA19463,NA19467,NA19469,NA19470,NA19471,NA19472,NA19473,NA19474,NA19625,NA19648,NA19658,NA19661,NA19676,NA19678,NA19685,NA19700,NA19701,NA19712,NA19713,NA19746,NA19780,NA19818,NA19819,NA19834,NA19900,NA19901,NA19916,NA19917,NA19982,NA20127,NA20332,NA20348,NA20510,NA20521,NA20533,NA20537,NA20541,NA20581,NA20757,NA20759,NA20770,NA20771,NA20785,NA20786,NA20787,NA20792,NA20796,NA20800,NA20802,NA20809,NA20810 esv2444029 1 7104046 7104194 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5208770 M 1 0 1 "" NA18507 esv2740584 1 7114650 7115473 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6729605,essv6880413,essv6972313,essv6961535,essv6742124,essv6888993,essv6888994,essv6810331,essv6703850,essv6679151,essv6863941,essv6954720,essv6696981,essv6898595,essv6816621,essv6937661,essv6804393,essv6682814,essv6895836,essv6916562,essv6669110,essv6784980,essv6824967,essv6816569,essv6843754,essv6929047,essv6668923,essv6853215,essv6668922,essv6906090,essv6846994,essv6756539,essv6766529,essv6735968,essv6859171,essv6750584,essv6859172 M 96 0 34 "" SSM003,SSM005,SSM010,SSM011,SSM014,SSM020,SSM022,SSM026,SSM027,SSM029,SSM031,SSM033,SSM034,SSM038,SSM040,SSM047,SSM050,SSM053,SSM057,SSM059,SSM064,SSM069,SSM074,SSM076,SSM078,SSM080,SSM086,SSM087,SSM088,SSM089,SSM094,SSM097,SSM099,SSM100 esv2740695 1 7114714 7115025 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6888993,essv6880413,essv6972313,essv6810331,essv6679151,essv6863941,essv6742124,essv6954720,essv6898595,essv6937661,essv6804393,essv6682814,essv6916562,essv6784980,essv6895836,essv6824967,essv6729605,essv6843754,essv6929047,essv6816569,essv6853215,essv6668922,essv6906090,essv6766529,essv6756539,essv6846994,essv6735968,essv6750584,essv6859171 M 96 0 29 "" SSM003,SSM011,SSM014,SSM020,SSM022,SSM026,SSM029,SSM031,SSM033,SSM034,SSM047,SSM050,SSM053,SSM057,SSM059,SSM064,SSM069,SSM074,SSM076,SSM078,SSM080,SSM086,SSM087,SSM088,SSM089,SSM094,SSM097,SSM099,SSM100 esv1124399 1 7114785 7115226 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4044198 M 2 0 1 "" HuRef esv2740806 1 7114937 7114999 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961535 M 96 0 1 "" SSM027 esv2740917 1 7115142 7115448 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6703850,essv6696981,essv6669110,essv6668923,essv6888994,essv6859172 M 96 0 6 "" SSM005,SSM031,SSM038,SSM040,SSM088,SSM097 esv2741028 1 7115294 7115635 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6753481,essv6703851,essv6810333,essv6876632,essv6863943,essv6718155,essv6961536,essv6682815,essv6839959,essv6784981,essv6789135,essv6710568,essv6750585,essv6846995,essv6892307,essv6714229,essv6859173 M 96 0 17 "" SSM012,SSM027,SSM034,SSM040,SSM042,SSM043,SSM044,SSM057,SSM058,SSM069,SSM070,SSM076,SSM084,SSM086,SSM088,SSM089,SSM098 esv2741139 1 7115562 7115633 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972314,essv6961536,essv6846995 M 96 0 3 "" SSM027,SSM029,SSM086 nsv462394 1 7126265 7171424 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538567 M 1557 0 1 "" HGDP00797 nsv545299 1 7126265 7171424 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173656 M 17421 0 1 "" HGDP00797 nsv476621 1 7260425 7260425 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013335 M 9 1 0 "" NA12878 esv275496 1 7264408 7265348 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586154 M 1250 0 1 "" nsv1410 1 7355566 7379927 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1411 M 9 1 0 "" NA19240 nsv955211 1 7384941 7390740 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001678 M 1 0 1 "" BILGI_BIOE nsv955212 1 7403341 7409240 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001689 M 1 0 1 "" BILGI_BIOE nsv955213 1 7417241 7521740 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001700 M 1 0 1 "" BILGI_BIOE esv2666029 1 7422963 7426226 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6179805,essv6204851 M 1151 0 2 "" NA19455,NA19472 nsv527338 1 7422986 7426257 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703764 M 2026 0 1 "" esv3363193 1 7426146 7426230 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8674084 M 185 1 0 "" NA19238 esv3345755 1 7426180 7426199 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593491 M 185 1 0 "" NA19141 esv3304817 1 7426181 7426182 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7827924,essv7811156,essv7781222,essv7771632,essv7782120,essv7825960,essv7791741 M 185 7 0 "" NA18498,NA18508,NA18871,NA19093,NA19108,NA19141,NA19238 esv3421992 1 7426188 7426204 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898521,essv8898524,essv8898523,essv8898520,essv8898522 M 185 5 0 "" NA18498,NA18508,NA18871,NA19093,NA19108 nsv831758 1 7431297 7611613 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442551,nssv1442562,nssv1442573,nssv1442584 M 95 1 3 "" nsv522589 1 7447582 7459204 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705976 M 2026 0 1 "" nsv518903 1 7452965 7458638 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696361 M 2026 0 1 "" esv2741250 1 7456913 7457076 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954721 M 96 0 1 "" SSM026 esv2741361 1 7473884 7474521 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972315,essv6933293,essv6967915,essv6748165,essv6753482,essv6750587,essv6742125,essv6950536,essv6759028,essv6747763,essv6816570,essv6883248,essv6853216,essv6756540 M 96 0 14 "" SSM008,SSM021,SSM025,SSM028,SSM029,SSM053,SSM056,SSM057,SSM058,SSM059,SSM061,SSM078,SSM087,SSM095 esv3394495 1 7479605 7481103 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692404 M 185 1 0 "" NA19240 nsv526782 1 7487152 7489428 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703134 M 2026 0 1 "" esv2661964 1 7492879 7493195 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6294946,essv5455258,essv6293916,essv5770295,essv6519373,essv5837134,essv6496652,essv5654342,essv6359806,essv5460735,essv6388199,essv5930148,essv5563441,essv5767850,essv5543317,essv5659994,essv5976416,essv5631811,essv5519409 M 1151 0 19 "" HG00182,HG00268,NA07048,NA07346,NA12272,NA12348,NA12751,NA12775,NA18595,NA19068,NA20537,NA20581,NA20770,NA20773,NA20787,NA20796,NA20807,NA20826,NA20828 esv2647714 1 7492912 7493175 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5309036 M 1 0 1 "" NA18507 esv1935214 1 7493330 7493640 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4549214 M 1 0 1 "" NA18507 nsv527595 1 7497092 7507352 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704056 M 2026 0 1 "" nsv545300 1 7497092 7507352 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709461 M 17421 0 1 "" dgv34e59 1 7497405 7500703 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3370220,esv3369338 M 185 2 0 "" NA19239,NA19240 esv3410484 1 7498205 7500403 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692407 M 185 1 0 "" NA19238 esv2741472 1 7498511 7501110 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821167,essv6836180,essv6913987,essv6686145,essv6972316,essv6910027,essv6753483,essv6954722,essv6895837,essv6921702,essv6898596,essv6937665,essv6937664,essv6937663,essv6898601,essv6950095,essv6784982,essv6925677,essv6925676,essv6946480,essv6941769,essv6902517,essv6710569,essv6668924,essv6859174 M 96 0 21 "" SSM004,SSM013,SSM015,SSM016,SSM018,SSM019,SSM022,SSM023,SSM024,SSM026,SSM029,SSM031,SSM035,SSM042,SSM058,SSM069,SSM079,SSM083,SSM088,SSM099,SSM100 esv2741695 1 7498707 7498913 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6925676 M 96 0 1 "" SSM019 dgv3e201 1 7498707 7499388 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2741583,esv2741806 M 96 0 5 "" SSM015,SSM019,SSM022,SSM024,SSM069 esv2741917 1 7499116 7500003 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821167,essv6836180,essv6686145,essv6753483,essv6921702,essv6898601,essv6937664,essv6898596,essv6937665,essv6895837,essv6950095,essv6941769,essv6925677,essv6710569,essv6902517,essv6668924 M 96 0 14 "" SSM004,SSM013,SSM018,SSM019,SSM022,SSM023,SSM031,SSM035,SSM042,SSM058,SSM079,SSM083,SSM099,SSM100 esv2661908 1 7499383 7500132 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6542409,essv5840912,essv6387039,essv6241832,essv6550513,essv6221071,essv6413800,essv5880716,essv6544631,essv5575074,essv6515957,essv5997726,essv6338713,essv6067706,essv6557749,essv5788311,essv6345359,essv6226576,essv6273213,essv5730675,essv6337763,essv5974102,essv6482932,essv5739381,essv6276685,essv5709998,essv6483131,essv5436826,essv6268374,essv6002886,essv6539128,essv6114357,essv6566368,essv5814285,essv6576540,essv5922093,essv6323846,essv5457551,essv6277708,essv6243910,essv6453030,essv6248487,essv6427001,essv6249502,essv6256312,essv6124063,essv6486219,essv5663358,essv6037941,essv6052009,essv5850234,essv5516870,essv5975923,essv5529359,essv5851944,essv6041331,essv5962151,essv5508604,essv6242215,essv5583577 M 1151 0 60 "" HG00106,HG00112,HG00123,HG00125,HG00239,HG00306,HG00418,HG00427,HG00512,HG00525,HG00566,HG00577,HG00580,HG00584,HG00595,HG00608,HG00654,HG00656,HG00663,HG00689,HG00692,HG00702,HG00704,HG00705,HG00707,HG01051,HG01075,HG01183,HG01440,NA11994,NA18549,NA18550,NA18593,NA18596,NA18615,NA18616,NA18623,NA18628,NA18634,NA18635,NA18961,NA18963,NA18984,NA19010,NA19074,NA19075,NA19077,NA19082,NA19130,NA19395,NA19434,NA19449,NA19453,NA19457,NA19684,NA19834,NA20518,NA20521,NA20586,NA20787 nsv826364 1 7506375 7507372 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1421439 M 31 1 0 "" NA18997 nsv545301 1 7507352 7511011 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709462 M 17421 0 1 "" nsv7991 1 7508425 7511693 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv26894 M 31 1 0 "" NA18860 esv28432 1 7509155 7511461 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12117 M 40 28 1 "" NA06985,NA11931,NA12004,NA12006,NA12156,NA12287,NA12414,NA12489,NA12749,NA12828,NA15510,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19147,NA19190,NA19225,NA19240,NA19257 nsv820592 1 7509155 7511541 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420846 M 1 0 1 "" NA10851 nsv826475 1 7509155 7511541 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1425484,nssv1422357,nssv1426370,nssv1431057,nssv1424725,nssv1423943,nssv1430329,nssv1440113,nssv1427245,nssv1428015,nssv1438581,nssv1421440,nssv1431790 M 31 0 13 "" AK10,AK16,AK18,AK2,AK20,AK4,AK6,AK8,NA18552,NA18564,NA18582,NA18973,NA18997 esv2592830 1 7509557 7512266 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5286155 M 1 0 1 "" NA18507 dgv88n54 1 7509754 7511011 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545302,nsv545307,nsv545313,nsv545311,nsv545312 M 17421 0 11 "" dgv89n54 1 7509754 7511403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545316,nsv545306,nsv545303,nsv545310 M 17421 0 91 "" esv7233 1 7509754 7511706 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29674 M 1 0 0 "" dgv90n54 1 7509754 7512202 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545305,nsv545304 M 17421 0 2 "" nsv819302 1 7509758 7511355 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419290 M 2 0 1 "" AK1 esv2190574 1 7509851 7511632 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4836092 M 1 0 1 "" NA18507 dgv91n54 1 7509916 7511266 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545309,nsv545315,nsv545308,nsv545314 M 17421 0 11 "" esv3915 1 7509974 7511624 CNV loss Wang_et_al_2008 18987735 Sequencing essv26356 M 1 0 1 "" YH esv2742028 1 7509983 7511476 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972318,essv6895838,essv6821168,essv6874691,essv6780853,essv6933294,essv6832586,essv6686146,essv6773424,essv6695576,essv6675190,essv6910029,essv6753484,essv6703852,essv6917411,essv6888995,essv6748176,essv6954723,essv6759029,essv6742126,essv6921703,essv6961537,essv6718156,essv6707252,essv6738799,essv6898602,essv6916573,essv6804394,essv6682816,essv6885976,essv6784983,essv6769506,essv6883249,essv6789136,essv6816571,essv6925678,essv6950106,essv6853217,essv6692747,essv6710570,essv6668925,essv6902518,essv6744926,essv6766530,essv6669121,essv6800598,essv6776925 M 96 0 47 "" SSM002,SSM003,SSM004,SSM005,SSM006,SSM008,SSM013,SSM015,SSM017,SSM018,SSM019,SSM021,SSM026,SSM027,SSM029,SSM031,SSM032,SSM034,SSM035,SSM037,SSM040,SSM041,SSM042,SSM044,SSM052,SSM053,SSM055,SSM058,SSM061,SSM064,SSM065,SSM066,SSM067,SSM068,SSM069,SSM070,SSM074,SSM078,SSM079,SSM082,SSM087,SSM092,SSM095,SSM096,SSM097,SSM099,SSM100 esv2657512 1 7510011 7511466 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6281857,essv6009563,essv6303515,essv5852805,essv6419778,essv6044362,essv6246172,essv5823780,essv6438446,essv6069629,essv6242378,essv5771007,essv6233292,essv5931759,essv6385424,essv5922932,essv6542778,essv5754165,essv6438064,essv5891446,essv6366028,essv5796224,essv6418911,essv6100322,essv6561443,essv5825537,essv6135664,essv5830971,essv6253213,essv5961649,essv6301711,essv5818092,essv6460683,essv6046099,essv6465910,essv5799224,essv6278813,essv5806520,essv6399921,essv5819410,essv6119227,essv5793684,essv6387037,essv5691391,essv6287100,essv5858235,essv6367627,essv5703541,essv6118990,essv5404078,essv6538809,essv5950392,essv6260423,essv6030341,essv6148159,essv5749177,essv6109378,essv5505561,essv6538832,essv5833907,essv6295813,essv6068568,essv6354211,essv5800783,essv6442019,essv5648473,essv6544648,essv5432008,essv6325203,essv6061070,essv6303691,essv6027439,essv6519589,essv5913542,essv6363379,essv6085784,essv6310275,essv5902353,essv6199820,essv5875330,essv6298889,essv5727746,essv6460438,essv5744317,essv6303084,essv5771428,essv6464636,essv5717552,essv6123121,essv5412555,essv6442157,essv5798315,essv6288927,essv5732462,essv6471769,essv5536940,essv6496136,essv5675761,essv6214231,essv5596979,essv6294648,essv5973166,essv6515447,essv5692329,essv6231964,essv5826648,essv6578015,essv5605115,essv6544861,essv5876669,essv6575482,essv5778687,essv6497319,essv5781061,essv6431057,essv5511424,essv6506775,essv5815954,essv6308899,essv5841667,essv6271138,essv5790430,essv6354985,essv5774461,essv6528378,essv5979160,essv6160948,essv6083900,essv6548964,essv5863502,essv6424790,essv5687666,essv6171336,essv5888481,essv6266308,essv5598326,essv6193427,essv5766898,essv6146355,essv5433351,essv6449470,essv6099962,essv6286695,essv5686531,essv6506715,essv5957916,essv6481631,essv5621444,essv6317995,essv5898893,essv6325429,essv5966237,essv6216050,essv5506505,essv6564812,essv5440192,essv6372156,essv5927521,essv6167253,essv5636594,essv6495337,essv5589809,essv6458057,essv5602417,essv6536764,essv5971897,essv6332805,essv6013738,essv6204790,essv5430800,essv6291742,essv5465801,essv6595199,essv6041407,essv6483263,essv5597762,essv6418480,essv5981620,essv6514311,essv5507085,essv6193468,essv6063213,essv6413777,essv5499302,essv6491045,essv5522275,essv6572516,essv5489293,essv6292739,essv5479781,essv6392822,essv5429536,essv6366589,essv5631596,essv6290633,essv5559722,essv6202404,essv5421776,essv6445191,essv6004098,essv6127324,essv5428010,essv6453378,essv6081607,essv6436832,essv5497751,essv6581519,essv6053521,essv6169504,essv5433597,essv6376701,essv6057755,essv6458151,essv5853039,essv6535980,essv5658671,essv6228501,essv6014564,essv6363517,essv5503175,essv6189325,essv5445583,essv6542461,essv5928849,essv6160626,essv6016935,essv6527507,essv6018100,essv6315369,essv5620153,essv6445705,essv5902435,essv6377227,essv6039563,essv6253385,essv5482762,essv6447140,essv5450460,essv6597320,essv5397363,essv6364050,essv5646630,essv6207963,essv5998324,essv6133433,essv5559985,essv6543277,essv6049159,essv6233645,essv5609761,essv6149199,essv5621604,essv6134386,essv6075734,essv6577034,essv5568082,essv5399289,essv5898881,essv5542914,essv6069004,essv5909185,essv5576898,essv5829887,essv5647981,essv6086542,essv5612440,essv5896582,essv5887358,essv5708133,essv5921143,essv5630336,essv5883741,essv5927894,essv5621944,essv5461375,essv6015013,essv5942501,essv5446598,essv5908549,essv5863653,essv5431607,essv5898397,essv5622190,essv6007472,essv5618196,essv5978907,essv5420861,essv5924719,essv5552465,essv6090700,essv5556929,essv5537806,essv5500732 M 1151 0 293 "" HG00096,HG00108,HG00111,HG00123,HG00137,HG00141,HG00145,HG00146,HG00149,HG00150,HG00177,HG00183,HG00185,HG00187,HG00188,HG00189,HG00244,HG00245,HG00246,HG00250,HG00257,HG00258,HG00259,HG00261,HG00263,HG00267,HG00270,HG00276,HG00281,HG00284,HG00309,HG00323,HG00324,HG00326,HG00329,HG00331,HG00334,HG00335,HG00337,HG00339,HG00357,HG00366,HG00372,HG00418,HG00422,HG00427,HG00428,HG00448,HG00463,HG00464,HG00472,HG00476,HG00478,HG00500,HG00501,HG00512,HG00524,HG00525,HG00531,HG00533,HG00534,HG00542,HG00543,HG00554,HG00556,HG00557,HG00560,HG00566,HG00577,HG00584,HG00589,HG00590,HG00595,HG00596,HG00608,HG00628,HG00641,HG00650,HG00653,HG00654,HG00656,HG00657,HG00663,HG00689,HG00692,HG00693,HG00698,HG00702,HG00704,HG00705,HG00707,HG00731,HG00740,HG01047,HG01061,HG01067,HG01072,HG01073,HG01080,HG01082,HG01083,HG01094,HG01107,HG01125,HG01137,HG01168,HG01170,HG01171,HG01174,HG01188,HG01334,HG01342,HG01375,HG01461,HG01497,HG01521,NA06986,NA06989,NA07000,NA07056,NA07346,NA10851,NA11829,NA11843,NA11894,NA11933,NA11993,NA11995,NA12044,NA12058,NA12155,NA12249,NA12272,NA12275,NA12282,NA12286,NA12341,NA12348,NA12414,NA12716,NA12748,NA12750,NA12751,NA12761,NA12763,NA12776,NA12778,NA12878,NA12889,NA12891,NA18507,NA18516,NA18543,NA18545,NA18546,NA18549,NA18550,NA18552,NA18553,NA18557,NA18561,NA18564,NA18565,NA18570,NA18571,NA18574,NA18576,NA18577,NA18579,NA18582,NA18593,NA18596,NA18597,NA18603,NA18608,NA18612,NA18613,NA18616,NA18618,NA18622,NA18623,NA18632,NA18633,NA18634,NA18635,NA18637,NA18638,NA18910,NA18917,NA18940,NA18961,NA18963,NA18971,NA18973,NA18974,NA18976,NA18982,NA18984,NA18985,NA18986,NA18989,NA18990,NA19002,NA19003,NA19004,NA19005,NA19012,NA19054,NA19055,NA19056,NA19058,NA19059,NA19064,NA19065,NA19066,NA19070,NA19074,NA19075,NA19077,NA19082,NA19083,NA19087,NA19107,NA19129,NA19172,NA19201,NA19347,NA19380,NA19382,NA19383,NA19399,NA19428,NA19429,NA19443,NA19455,NA19456,NA19461,NA19463,NA19470,NA19648,NA19652,NA19660,NA19661,NA19663,NA19670,NA19678,NA19681,NA19716,NA19717,NA19719,NA19762,NA19773,NA19776,NA19782,NA19783,NA19900,NA19904,NA19917,NA20291,NA20340,NA20344,NA20502,NA20507,NA20516,NA20524,NA20525,NA20528,NA20529,NA20530,NA20531,NA20534,NA20535,NA20540,NA20541,NA20542,NA20586,NA20588,NA20589,NA20754,NA20761,NA20765,NA20769,NA20771,NA20778,NA20801,NA20804,NA20807,NA20808,NA20811,NA20812,NA20816,NA20818,NA20826 nsv958568 1 7510014 7511425 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3004927 M 1 0 1 "" BILGI_BIOE dgv92n54 1 7510016 7511936 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545317,nsv545326,nsv545323,nsv545330,nsv545334,nsv545332 M 17421 0 14 "" dgv10n67 1 7510163 7511332 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv826586,nsv826697 M 31 2 0 "" NA18968,NA18969 dgv93n54 1 7510172 7511011 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545319,nsv545318 M 17421 0 6 "" dgv94n54 1 7510172 7511403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545329,nsv545321,nsv545328,nsv545320,nsv545327,nsv545322,nsv545325,nsv545324,nsv545331 M 17421 0 36 "" nsv545333 1 7510500 7511403 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709636,nssv709633,nssv709637,nssv709632,nssv709634,nssv709639,nssv709635,nssv709638 M 17421 0 8 "" nsv545335 1 7510500 7515606 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709642 M 17421 0 1 "" nsv826808 1 7510503 7511083 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436326 M 31 1 0 "" NA18542 esv2758918 1 7511403 7627999 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756834 M 270 1 0 "" NA19152 esv23816 1 7517598 7519818 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15537 M 40 0 1 "" NA18916 esv3310514 1 7519367 7520795 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843513 M 185 1 0 "" NA19240 nsv512715 1 7520096 7520399 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625339 M 1 1 0 "" 1 esv3347816 1 7520145 7520356 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652098 M 185 1 0 "" NA19240 esv2742139 1 7542465 7542682 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972319,essv6913988,essv6780854,essv6843873,essv6793270,essv6703853,essv6725840,essv6937666,essv6797436,essv6718809,essv6839960,essv6941770,essv6828991,essv6789137,essv6729606,essv6784984,essv6853218,essv6692748,essv6668926,essv6871704,essv6714230,essv6892308 M 96 0 22 "" SSM007,SSM016,SSM022,SSM023,SSM029,SSM031,SSM037,SSM040,SSM043,SSM046,SSM047,SSM068,SSM069,SSM070,SSM071,SSM072,SSM081,SSM084,SSM085,SSM087,SSM091,SSM098 esv2742250 1 7548286 7548608 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6789138 M 96 0 1 "" SSM070 esv2742361 1 7548422 7549091 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972320,essv6686147,essv6950537,essv6703855,essv6703856,essv6748187,essv6954724,essv6961538,essv6824968,essv6729607,essv6929048,essv6668927,essv6813160 M 96 0 12 "" SSM008,SSM020,SSM025,SSM026,SSM027,SSM029,SSM031,SSM035,SSM040,SSM047,SSM077,SSM080 esv2742472 1 7548466 7548620 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6729607 M 96 0 1 "" SSM047 esv2742583 1 7548519 7548833 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972320,essv6703855,essv6954724,essv6961538,essv6824968,essv6668927,essv6813160 M 96 0 7 "" SSM026,SSM027,SSM029,SSM031,SSM040,SSM077,SSM080 esv2659209 1 7548647 7548928 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5552184,essv6171580,essv5833833,essv6521117,essv5830392,essv6202094,essv5767932,essv6483714,essv6023491,essv6181882,essv5731775,essv6454559,essv5969456,essv6227062,essv5712548,essv6491493,essv5706547,essv6259671,essv5606710,essv6209120,essv5734717,essv6481233,essv5780800,essv6332746,essv5758254,essv6448015,essv5425830,essv6172097,essv5467230,essv6296113,essv5706883,essv6292677,essv5922415,essv6177373,essv5502203,essv6508398,essv6047007,essv6370362,essv5818796,essv6364686,essv5974689,essv6197629,essv5479911,essv6381961,essv5463301,essv6456482,essv5596229,essv6449723,essv6002095,essv6560388,essv5897976,essv6363270,essv5945474,essv6308050,essv5408562,essv6307472,essv5869401,essv6425308,essv5859553,essv5484759,essv5598963,essv6082159,essv5843249,essv5777606,essv6046646,essv5420525,essv5867425,essv5424543,essv6134379,essv6011559,essv5621963 M 1151 0 71 "" HG00111,HG00125,HG00154,HG00265,HG00277,HG00313,HG00319,HG00321,HG00323,HG00330,HG00342,HG00345,HG00369,HG00418,HG00427,HG00463,HG00475,HG00500,HG00512,HG00524,HG00534,HG00581,HG00589,HG00654,HG00657,HG00662,HG00671,HG00699,HG00701,HG00707,HG00708,HG01051,HG01052,HG01061,HG01067,HG01069,HG01070,HG01072,HG01079,HG01082,HG01102,HG01112,HG01251,HG01334,HG01354,HG01389,HG01437,HG01518,NA12829,NA12889,NA18530,NA18559,NA18563,NA18564,NA18595,NA18597,NA18602,NA18610,NA18635,NA18949,NA18956,NA19327,NA19663,NA19707,NA19731,NA19758,NA19762,NA19773,NA19785,NA19786,NA20299 esv993163 1 7548672 7548898 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3579404 M 3 0 1 "" HuRef esv2742694 1 7548675 7549027 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972320,essv6954724,essv6686147,essv6950537,essv6703856,essv6961538,essv6929048,essv6668927 M 96 0 8 "" SSM020,SSM025,SSM026,SSM027,SSM029,SSM031,SSM035,SSM040 esv1611358 1 7548680 7548907 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3860626 M 2 0 1 "" HuRef esv2742806 1 7548682 7548909 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972320,essv6686147,essv6954724,essv6961538,essv6668927 M 96 0 5 "" SSM026,SSM027,SSM029,SSM031,SSM035 nsv955214 1 7549541 7688940 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001711 M 1 0 1 "" BILGI_BIOE dgv35e59 1 7567505 7570103 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3418027,esv3352384,esv3413631 M 185 3 0 "" NA19238,NA19239,NA19240 esv2764250 1 7570664 7575147 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004920,essv7004919 M 1109 0 2 "" RW_0530,RW_0546 nsv520077 1 7577919 7584742 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697212 M 2026 0 1 "" esv2672475 1 7585694 7588372 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6057115,essv5833909,essv6269373,essv6336025,essv5955720 M 1151 0 5 "" NA19093,NA19374,NA19383,NA19399,NA19916 dgv36e59 1 7654405 7655903 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3418679,esv3350641 M 185 2 0 "" NA19239,NA19240 esv8105 1 7654547 7655630 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30546 M 1 0 0 "" esv1977744 1 7654972 7655326 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4674847 M 1 0 1 "" NA18507 esv28595 1 7702969 7705498 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13845 M 40 1 0 "" NA06985 nsv545336 1 7703154 7705394 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709643 M 17421 0 1 "" nsv953452 1 7703941 7707440 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001723 M 1 0 1 "" BILGI_BIOE esv3418854 1 7732018 7732029 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863673 M 185 1 0 "" NA12005 esv2671025 1 7743113 7744391 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5719957,essv5844959,essv5838521,essv6542419,essv6423324 M 1151 0 5 "" HG01170,NA19332,NA19435,NA19466,NA19703 nsv161033 1 7796337 7804880 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179611 M 24 "" esv2742917 1 7829415 7830304 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972321,essv6828992,essv6967916,essv6821169,essv6801611,essv6725841,essv6780856,essv6874692,essv6721994,essv6832588,essv6773425,essv6933296,essv6843874,essv6675191,essv6793271,essv6913989,essv6917412,essv6910030,essv6748198,essv6679152,essv6954725,essv6718157,essv6707254,essv6876643,essv6937667,essv6961539,essv6824969,essv6950538,essv6784476,essv6797437,essv6868702,essv6816632,essv6839961,essv6729608,essv6769507,essv6895839,essv6929049,essv6925679,essv6807362,essv6941771,essv6853219,essv6789139,essv6692749,essv6710571,essv6916584,essv6668928,essv6871705,essv6846996,essv6950117,essv6902520,essv6813161,essv6766531,essv6776926,essv6892309 M 96 0 54 "" SSM003,SSM004,SSM008,SSM009,SSM010,SSM012,SSM013,SSM015,SSM016,SSM017,SSM019,SSM020,SSM021,SSM022,SSM023,SSM025,SSM026,SSM027,SSM028,SSM029,SSM031,SSM032,SSM033,SSM037,SSM041,SSM042,SSM044,SSM045,SSM046,SSM047,SSM064,SSM065,SSM066,SSM067,SSM068,SSM070,SSM071,SSM072,SSM073,SSM075,SSM077,SSM079,SSM080,SSM081,SSM082,SSM084,SSM085,SSM086,SSM087,SSM090,SSM091,SSM092,SSM098,SSM099 esv2743028 1 7829879 7829972 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961539 M 96 0 1 "" SSM027 esv991458 1 7829927 7829980 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570335 M 3 0 1 "" HuRef nsv477904 1 7838649 7838649 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016187 M 9 1 0 "" NA18517 esv2660700 1 7848692 7849434 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5452478 M 1151 0 1 "" HG00310 esv3451111 1 7856617 7856617 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701371 M 185 1 0 "" NA12878 esv2743139 1 7862841 7863052 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6692750,essv6946481 M 96 0 2 "" SSM024,SSM037 esv2989084 1 7862976 7863055 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7258651 M 1 0 1 "" HuRef esv1585189 1 7862989 7863049 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3804508 M 2 0 1 "" HuRef esv9095 1 7864806 7865585 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31536 M 1 0 0 "" esv5046 1 7864874 7865612 CNV loss Wang_et_al_2008 18987735 Sequencing essv27487 M 1 0 1 "" YH nsv160721 1 7864877 7865324 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179299 M 24 "" esv2666092 1 7864885 7865276 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6483548,essv5463023,essv6465980,essv6195881,essv6543789,essv5969046,essv6488901,essv5609501,essv6549133,essv5790466,essv6492955,essv6337729,essv6594272,essv5700534,essv6537226,essv5798382,essv6459955,essv5812895,essv6543548,essv5820660,essv6502651,essv5706376,essv6538912,essv6054870,essv6536918,essv5757180,essv6586392,essv5630473,essv6432049,essv6257924,essv6480407,essv5792118,essv6493965,essv6247186,essv6443466,essv6232486,essv6532343,essv5732882,essv6561835,essv6067271,essv6588926,essv5809859,essv6595168,essv6125308,essv6596517,essv5739240,essv6591211,essv5662041,essv6456380,essv6126415,essv6563493,essv5828338,essv6489640,essv5774770,essv6574163,essv5620420,essv6571214,essv6262983,essv6533523,essv5605737,essv6590580,essv5895385,essv6430122,essv5849787,essv6510402,essv5764081,essv6555651,essv6397283,essv6500087,essv6048322,essv6431536,essv6126445,essv6548934,essv5787385,essv5742128,essv5592926,essv5487791,essv5514785,essv6171633,essv5675700,essv5825612,essv5783009,essv5945998,essv5763197,essv5749862,essv6132482,essv5714806,essv5769304,essv5782284,essv6217184,essv6185869,essv6380499,essv6266602,essv6077919,essv5696355,essv5785920,essv5451346,essv5533668,essv6340838,essv5755871,essv6271673,essv6280524,essv5686994,essv6068574,essv6048485,essv5833541,essv6118058,essv5703301,essv6271034,essv6152229,essv6163458,essv5823164,essv5675803,essv5476783,essv5818900,essv5770734,essv5827539,essv5741919,essv5749682,essv5738581,essv6071488,essv5731566,essv6071609,essv6051596,essv5514645,essv5623821,essv5961735,essv5612438,essv6356675,essv5651255,essv5958114,essv6290565,essv6103553,essv6179194,essv5853694,essv5433918,essv5979087,essv6132893,essv5909595,essv6002534,essv5865517,essv5419681,essv5553418,essv5578543,essv5618733,essv6287297,essv5857566,essv6320462,essv5529811,essv6155420,essv5663920,essv6243959,essv6237111,essv6410868,essv5867074,essv6017867,essv6112075,essv6087682,essv5522498,essv5604893,essv5523146,essv5412831,essv6362683,essv5545435,essv6018318,essv6203039,essv6363300,essv5446050,essv6049443,essv6069827,essv5406419,essv5944620,essv6260868,essv5431965,essv6293654,essv5482282,essv5942016,essv5463498,essv6018911,essv5580851,essv5887726,essv6281345,essv6274257,essv5603289,essv5557584,essv6035737,essv6081705,essv5916279,essv6080098,essv6023986,essv6019104,essv6082818,essv5438546,essv5669965,essv5981820,essv6077397,essv5477186,essv5529064,essv5644539,essv5605498,essv5481507,essv5902168,essv5504634,essv5768657,essv5866722,essv5868308,essv6265135,essv5452962,essv5604664,essv5601098,essv6393424,essv6285255,essv5937051,essv5628583,essv5568558,essv6358896,essv6311558,essv6026868,essv6148849,essv6380029,essv5535767,essv5448321,essv5481799,essv6071672,essv6125274,essv5956820,essv6373175,essv6171239,essv5500862,essv6371896,essv6094165,essv5645969 M 1151 0 232 "" HG00108,HG00111,HG00125,HG00154,HG00158,HG00177,HG00236,HG00237,HG00246,HG00249,HG00251,HG00253,HG00257,HG00263,HG00267,HG00271,HG00273,HG00275,HG00276,HG00277,HG00278,HG00281,HG00284,HG00309,HG00315,HG00319,HG00326,HG00328,HG00329,HG00330,HG00331,HG00334,HG00337,HG00339,HG00342,HG00345,HG00346,HG00369,HG00375,HG00403,HG00404,HG00418,HG00419,HG00421,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00531,HG00533,HG00534,HG00536,HG00537,HG00543,HG00556,HG00557,HG00559,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00595,HG00607,HG00608,HG00610,HG00613,HG00614,HG00619,HG00620,HG00626,HG00628,HG00638,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00701,HG00702,HG00704,HG00705,HG00707,HG00740,HG01051,HG01052,HG01061,HG01069,HG01072,HG01073,HG01101,HG01102,HG01107,HG01124,HG01125,HG01133,HG01134,HG01136,HG01148,HG01149,HG01171,HG01173,HG01174,HG01187,HG01342,HG01351,HG01354,HG01366,HG01383,HG01390,HG01440,HG01462,HG01491,HG01492,NA12546,NA18530,NA18532,NA18536,NA18542,NA18543,NA18544,NA18546,NA18548,NA18549,NA18550,NA18557,NA18559,NA18560,NA18561,NA18562,NA18567,NA18574,NA18576,NA18577,NA18592,NA18595,NA18596,NA18597,NA18599,NA18602,NA18606,NA18610,NA18612,NA18613,NA18614,NA18615,NA18616,NA18619,NA18620,NA18621,NA18623,NA18624,NA18626,NA18627,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18868,NA18941,NA18963,NA18977,NA18984,NA18985,NA18987,NA18990,NA18999,NA19002,NA19007,NA19062,NA19072,NA19075,NA19076,NA19077,NA19080,NA19082,NA19084,NA19085,NA19088,NA19130,NA19312,NA19359,NA19391,NA19396,NA19445,NA19446,NA19455,NA19663,NA19664,NA19681,NA19682,NA19685,NA19716,NA19717,NA19720,NA19723,NA19788,NA19818 esv29691 1 7864892 7865497 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10705 M 40 0 4 "" NA12004,NA12749,NA18502,NA18858 nsv821110 1 7864892 7865497 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420957 M 1 0 1 "" NA10851 esv2743250 1 7864935 7865461 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972322,essv6780857,essv6967918,essv6821170,essv6874693,essv6669132,essv6721995,essv6832589,essv6843875,essv6773426,essv6695587,essv6917413,essv6793272,essv6913990,essv6888996,essv6910031,essv6679153,essv6863944,essv6742127,essv6748209,essv6954726,essv6707255,essv6950539,essv6666886,essv6824970,essv6718158,essv6843765,essv6725842,essv6937668,essv6682817,essv6804395,essv6898603,essv6797438,essv6868703,essv6885977,essv6892311,essv6895840,essv6729610,essv6883250,essv6747764,essv6807363,essv6906091,essv6853221,essv6929050,essv6789140,essv6941772,essv6710572,essv6761845,essv6668929,essv6816643,essv6756541,essv6902521,essv6776927,essv6950128 M 96 0 54 "" SSM004,SSM005,SSM006,SSM008,SSM010,SSM011,SSM013,SSM014,SSM015,SSM016,SSM017,SSM020,SSM022,SSM023,SSM025,SSM026,SSM028,SSM029,SSM030,SSM031,SSM033,SSM034,SSM041,SSM042,SSM044,SSM045,SSM046,SSM047,SSM053,SSM056,SSM059,SSM062,SSM066,SSM067,SSM068,SSM070,SSM071,SSM072,SSM074,SSM075,SSM079,SSM080,SSM082,SSM085,SSM087,SSM089,SSM090,SSM092,SSM095,SSM096,SSM097,SSM098,SSM099,SSM100 esv2743361 1 7902863 7903275 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821171,essv6972323,essv6721996,essv6780858,essv6686148,essv6773427,essv6675192,essv6913991,essv6695599,essv6669143,essv6888997,essv6759030,essv6696982,essv6954727,essv6937669,essv6707256,essv6898604,essv6725844,essv6883251,essv6816572,essv6925680,essv6789141,essv6853222,essv6929051,essv6692751,essv6941774,essv6846997,essv6902522,essv6699590,essv6859175 M 96 0 30 "" SSM005,SSM006,SSM013,SSM016,SSM019,SSM020,SSM022,SSM023,SSM026,SSM029,SSM032,SSM035,SSM037,SSM038,SSM039,SSM041,SSM045,SSM046,SSM061,SSM066,SSM068,SSM070,SSM078,SSM079,SSM086,SSM087,SSM088,SSM095,SSM097,SSM100 nsv954686 1 7903107 7903341 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000470 M 1 0 1 "" BILGI_BIOE dgv4e201 1 7903109 7903274 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2740756,esv2743441 M 96 0 2 "" SSM031,SSM089 dgv5e201 1 7903109 7903426 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2743430,esv2740757,esv2741890,esv2741974,esv2742007 M 96 0 6 "" SSM031,SSM072,SSM075,SSM076,SSM080,SSM089 esv3302892 1 7913135 7913482 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7736127 M 185 0 0 "" NA19093 esv2678721 1 7915332 7918244 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5580510 M 1151 0 1 "" HG00159 esv2743452 1 7942010 7942319 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6941775 M 96 0 1 "" SSM023 nsv1521 1 7954179 7987433 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2406 M 9 1 0 "" NA18555 esv2403277 1 7990350 7990709 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4650492 M 1 0 1 "" NA18507 esv6796 1 8026829 8027003 CNV gain Ahn_et_al_2009 19470904 Sequencing essv29237 M 1 0 0 "" nsv945757 1 8057016 8063696 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1750951,nssv1752573,nssv1750946,nssv1750976,nssv1750949,nssv1750964,nssv1751022,nssv1750991,nssv1750945,nssv1750968,nssv1750953,nssv1750987,nssv1751023,nssv1752572,nssv1750948,nssv1751006,nssv1751016,nssv1750984,nssv1750952,nssv1751005,nssv1750943,nssv1751011,nssv1750939,nssv1750985,nssv1750954,nssv1751002,nssv1751015,nssv1750957,nssv1751018,nssv1750974,nssv1750956,nssv1750994,nssv1750938,nssv1750973,nssv1751017,nssv1751001,nssv1750942,nssv1750966,nssv1751019,nssv1750983,nssv1750940,nssv1751004,nssv1750944,nssv1751027,nssv1750947,nssv1750958,nssv1751020,nssv1750963,nssv1750950,nssv1750959,nssv1751014,nssv1750990,nssv1750941,nssv1750997,nssv1750955,nssv1750989,nssv1751000,nssv1750961,nssv1750937,nssv1750975,nssv1752569,nssv1751009,nssv1751021,nssv1750978,nssv1751012,nssv1752570,nssv1750999,nssv1751007,nssv1750979,nssv1750995,nssv1751026,nssv1750970,nssv1750992,nssv1750965,nssv1750993,nssv1750967,nssv1750998,nssv1751025,nssv1750996,nssv1751013,nssv1750977,nssv1750971,nssv1750988,nssv1750981,nssv1750980,nssv1751010,nssv1751008,nssv1752571,nssv1750982,nssv1752568,nssv1751024,nssv1750972,nssv1750969,nssv1750986,nssv1750962,nssv1750960,nssv1751003 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv528132 1 8085234 8087097 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704677 M 2026 0 1 "" esv2661294 1 8087296 8087648 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5434164,essv5647987 M 1151 0 2 "" HG00512,HG00524 esv2764230 1 8113309 8129225 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004923,essv7004921,essv7004939,essv7004927,essv7004925,essv7004924,essv7004926,essv7004932,essv7004928,essv7004931,essv7004929,essv7004930,essv7004938,essv7004934,essv7004936,essv7004937,essv7004935,essv7004940 M 1109 0 18 "" RW_0013,RW_0043,RW_0049,RW_0098,RW_0118,RW_0129,RW_0155,RW_0162,RW_0174,RW_0190,RW_0220,RW_0229,RW_0234,RW_0253,RW_0552,RW_0619,RW_0626,RW_0634 esv2672911 1 8122346 8130815 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5663474,essv5795918,essv6383717,essv5603109,essv6042179,essv5471431,essv5851511,essv5467236,essv6161910 M 1151 0 9 "" NA19107,NA19213,NA19373,NA19437,NA19471,NA19472,NA19664,NA19701,NA19704 esv25059 1 8122384 8131315 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14504 M 40 0 2 "" NA07045,NA19108 esv2421513 1 8122402 8129794 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5159857,essv5154659,essv5053091,essv5012227,essv5037691,essv5115860,essv5022989,essv5113994,essv5088579,essv5028046,essv5060745,essv5142796,essv5141409,essv5016176,essv5120988,essv5009796,essv5014120,essv5022164,essv5003208,essv5078502,essv5071617,essv5132727,essv5038470,essv5120024,essv5005423,essv5075870,essv5021464,essv5114664,essv5019834,essv5015810,essv5073414,essv5080397,essv5053733,essv5031289,essv5146224,essv5147348,essv5107816,essv5143136,essv5142988 M 1184 0 39 "" NA06997,NA07045,NA18933,NA19035,NA19107,NA19108,NA19109,NA19127,NA19153,NA19154,NA19204,NA19207,NA19213,NA19215,NA19313,NA19318,NA19321,NA19352,NA19373,NA19374,NA19403,NA19437,NA19471,NA19472,NA19664,NA19701,NA19702,NA19704,NA19915,NA20288,NA20297,NA20343,NA20347,NA20363,NA21295,NA21317,NA21424,NA21580,NA21596 nsv442907 1 8122524 8129225 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617691,nssv1617647,nssv1617669,nssv1617702,nssv1617658,nssv1617680 M 270 0 6 "" NA19127,NA19153,NA19154,NA19204,NA19205,NA19207 esv2660395 1 8125270 8126231 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5581631 M 1151 0 1 "" NA18534 nsv545337 1 8140630 8150875 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709644 M 17421 1 0 "" esv2763847 1 8142297 8149261 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7031301,essv7030856,essv7030967,essv7031412,essv7031190,essv7031078 M 1109 6 0 "" SW_0568,SW_1045,SW_1057,SW_1111,SW_1127,SW_1166 nsv831870 1 8143347 8294097 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442595,nssv1442606,nssv1442617,nssv1442630,nssv1442641,nssv1442652 M 95 0 6 "" esv22301 1 8144024 8151067 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv10444 M 40 3 0 "" NA11931,NA12004,NA12239 dgv95n54 1 8144659 8151014 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545340,nsv545339,nsv545338 M 17421 4 0 "" nsv441679 1 8146070 8149261 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656568,nssv1656576,nssv1656572,nssv1656569,nssv1656579,nssv1656574,nssv1656577,nssv1656570,nssv1656573,nssv1656571,nssv1656580,nssv1656575,nssv1656578 M 270 13 0 "" NA07019,NA07022,NA10854,NA10857,NA11831,NA11840,NA12004,NA12043,NA12146,NA12155,NA12236,NA12239,NA12752 esv23800 1 8156768 8180758 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv15760 M 40 1 0 "" NA12156 nsv545341 1 8157027 8165521 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709649 M 17421 1 0 "" nsv545342 1 8157027 8170120 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709650 M 17421 1 0 "" nsv545343 1 8163772 8215224 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709651 M 17421 0 1 "" nsv1632 1 8178349 8223514 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7290 M 9 0 1 "" NA12156 esv2673013 1 8187695 8190005 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6455515,essv6127302,essv6425063,essv5869405,essv6226674,essv6532958,essv5459203,essv5590716,essv6386418,essv6234149,essv6250393 M 1151 0 11 "" HG01107,NA18505,NA19107,NA19213,NA19373,NA19374,NA19437,NA19452,NA19471,NA19472,NA19704 esv2676421 1 8223311 8224757 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6406057,essv5704499,essv6198697,essv5900225,essv6358608,essv5779092,essv6274360,essv6210977,essv5780250,essv6489753,essv5687952,essv6575204,essv6544502,essv6264533,essv6498094,essv5754571,essv6218567,essv6534122,essv5865835,essv6375769,essv5429899,essv5850095,essv5510957,essv6512348,essv5753462,essv5904040,essv6426066,essv5636477,essv6150189,essv5412219,essv6464576,essv5495917,essv5884882,essv6240205,essv5545977 M 1151 0 35 "" HG00119,HG00246,HG00275,HG00277,HG00328,HG00513,HG00537,HG00580,HG00613,HG00619,HG00657,HG01060,HG01061,HG01070,HG01171,HG01334,HG01375,NA06989,NA12058,NA18612,NA18910,NA18988,NA19004,NA19058,NA19062,NA19067,NA19070,NA19072,NA19347,NA19684,NA19685,NA19703,NA19719,NA19783,NA20581 esv1547514 1 8276877 8276877 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3685454 M 2 1 0 "" HuRef esv2658784 1 8278121 8278887 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5974633 M 1151 0 1 "" NA19371 esv2663055 1 8300179 8303979 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6593461,essv5646640,essv6503910,essv5642347,essv6407017,essv5914197,essv6571256,essv5544793,essv6093244,essv5940148,essv5890810,essv5936414,essv5868670,essv5463476,essv6284524,essv5975382,essv5770868 M 1151 0 17 "" HG01048,HG01101,HG01148,HG01149,HG01351,HG01390,HG01492,HG01494,NA18948,NA19657,NA19664,NA19681,NA19682,NA19717,NA19722,NA19726,NA19732 nsv947411 1 8300695 8313174 CNV deletion Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762787 M 97 0 1 "" HGDP00998 esv2743463 1 8301174 8301758 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6759032,essv6874694,essv6863946,essv6679156,essv6895841,essv6876654,essv6733473,essv6756542,essv6668934,essv6846999 M 96 0 10 "" SSM012,SSM031,SSM033,SSM049,SSM059,SSM061,SSM086,SSM089,SSM092,SSM099 esv2743475 1 8301292 8301530 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6895841,essv6668934 M 96 0 2 "" SSM031,SSM099 esv2743486 1 8301431 8301510 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6863946 M 96 0 1 "" SSM089 nsv1743 1 8317693 8351656 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3033 M 9 1 0 "" NA18555 nsv512716 1 8321625 8322497 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625340 M 1 1 0 "" 1 esv2601359 1 8321757 8322554 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5225689 M 1 1 0 "" NA18507 nsv516827 1 8330828 8363450 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv657128,nssv693424,nssv684816,nssv685632,nssv654276,nssv679037,nssv671511,nssv693483,nssv656941 M 2026 0 9 "" esv1250756 1 8331447 8331447 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4006791 M 2 1 0 "" HuRef esv2624373 1 8344345 8345279 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5304328 M 1 1 0 "" NA18507 esv1162151 1 8344895 8344895 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4276612 M 2 1 0 "" HuRef nsv545344 1 8355461 8373940 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709652 M 17421 0 1 "" nsv819494 1 8356088 8361371 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419699 M 2 1 0 "" AK1 esv990980 1 8375519 8375519 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3583268 M 3 1 0 "" HuRef esv3404682 1 8386558 8386577 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593524,essv9593502,essv9593591,essv9593546,essv9593569,essv9593558,essv9593513,essv9593535,essv9593580 M 185 9 0 "" NA11931,NA12249,NA12287,NA12812,NA12814,NA12874,NA18970,NA19141,NA19143 esv2674889 1 8387305 8415484 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5500893 M 1151 0 1 "" NA19676 nsv524946 1 8395652 8412104 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv700963 M 2026 0 1 "" nsv947412 1 8419514 8422046 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2762537 M 97 1 0 "" HGDP00998 esv3360802 1 8441922 8441941 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593635,essv9593602,essv9593624,essv9593613 M 185 4 0 "" NA11931,NA12045,NA12287,NA12814 esv3305985 1 8441931 8441932 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7769792,essv7766623,essv7767274,essv7768946,essv7769164,essv7764325 M 185 6 0 "" NA11894,NA11931,NA12045,NA12287,NA12814,NA12874 nsv479019 1 8449923 8449923 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019838 M 9 0 0 "" esv3441259 1 8468247 8468266 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593646 M 185 1 0 "" NA11931 esv2658508 1 8490186 8491266 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6564525,essv5769185,essv6587455,essv5951206,essv6380234,essv5997657,essv6458320,essv5459792,essv6364724,essv5705056,essv6218155,essv5794451,essv6251894,essv5722851,essv6233344,essv5440404,essv6498976,essv5438161,essv6414719,essv5684596,essv6361968,essv5396045,essv6437544,essv5781398,essv6184313,essv5573556,essv6104798,essv5485459,essv5473287,essv5406895,essv6049526,essv6002612,essv5999450,essv5979257,essv5860653,essv5411462,essv5883424,essv5559262,essv5525731,essv6056060,essv6062960,essv5580820,essv5626398,essv6060066,essv5928864 M 1151 0 45 "" HG01108,HG01174,HG01350,HG01384,HG01489,NA11931,NA18508,NA18517,NA18593,NA18856,NA18858,NA18870,NA18874,NA18934,NA19093,NA19129,NA19130,NA19147,NA19153,NA19190,NA19197,NA19204,NA19210,NA19235,NA19247,NA19257,NA19311,NA19316,NA19355,NA19371,NA19376,NA19379,NA19398,NA19401,NA19429,NA19434,NA19444,NA19445,NA19457,NA19462,NA19625,NA19682,NA19684,NA19703,NA19835 esv25533 1 8490398 8491662 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11693,esv13828 M 40 0 4 "" NA18517,NA18858,NA19129,NA19190 esv3391677 1 8509404 8509404 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740979 M 185 1 0 "" NA19240 nsv159615 1 8517557 8521176 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178193 M 24 "" nsv947413 1 8609360 8614398 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761317,nssv2756775,nssv2757427,nssv2765449 M 97 4 0 "" HGDP00456,HGDP00778,HGDP00927,HGDP01029 nsv826919 1 8611331 8613911 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423363 M 31 1 0 "" NA18968 esv26500 1 8611559 8625675 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv13894,esv17365,esv15623,esv10195 M 40 2 28 "" NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12776,NA12828,NA12878,NA15510,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19108,NA19129,NA19147,NA19225,NA19240 nsv945758 1 8614398 8616370 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752577,nssv1752574,nssv1752578,nssv1752583,nssv1752582,nssv1752580,nssv1752579,nssv1752576,nssv1752575,nssv1752581 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv827030 1 8614501 8624951 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1435647 M 31 0 1 "" NA18566 esv2743497 1 8645606 8646559 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6689251,essv6780859,essv6832590,essv6721997,essv6773428,essv6972324,essv6917414,essv6793273,essv6910032,essv6679157,essv6748220,essv6921704,essv6954728,essv6738800,essv6824972,essv6769508,essv6729611,essv6784985,essv6853223,essv6692752,essv6789142,essv6946482,essv6967919,essv6668935,essv6916596,essv6847000,essv6876665,essv6699591,essv6902523,essv6950139,essv6950541,essv6714231 M 96 0 32 "" SSM003,SSM004,SSM008,SSM012,SSM013,SSM015,SSM017,SSM018,SSM024,SSM025,SSM026,SSM028,SSM029,SSM031,SSM033,SSM036,SSM037,SSM039,SSM043,SSM045,SSM047,SSM052,SSM065,SSM066,SSM068,SSM069,SSM070,SSM071,SSM080,SSM082,SSM086,SSM087 esv2743508 1 8645774 8646277 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6721997,essv6689251,essv6780859,essv6832590,essv6793273,essv6910032,essv6917414,essv6679157,essv6748220,essv6921704,essv6954728,essv6824972,essv6729611,essv6950541,essv6784985,essv6967919,essv6853223,essv6692752,essv6789142,essv6946482,essv6668935,essv6847000,essv6876665,essv6699591,essv6714231,essv6902523,essv6950139 M 96 0 27 "" SSM004,SSM008,SSM012,SSM013,SSM015,SSM017,SSM018,SSM024,SSM025,SSM026,SSM028,SSM031,SSM033,SSM036,SSM037,SSM039,SSM043,SSM045,SSM047,SSM068,SSM069,SSM070,SSM071,SSM080,SSM082,SSM086,SSM087 esv2407042 1 8645887 8646311 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4792099 M 1 0 1 "" NA18507 esv27511 1 8655129 8660180 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17675 M 40 2 0 "" NA15510,NA18861 nsv827141 1 8655692 8659721 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423374 M 31 1 0 "" NA18968 esv2743519 1 8668556 8669422 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6773429,essv6972325,essv6753485,essv6742128,essv6759033,essv6954730,essv6738801,essv6747766,essv6961541,essv6776928,essv6668936,essv6847001,essv6859177,essv6876676,essv6714233,essv6735969 M 96 0 16 "" SSM012,SSM026,SSM027,SSM029,SSM031,SSM043,SSM050,SSM052,SSM053,SSM056,SSM058,SSM061,SSM066,SSM067,SSM086,SSM088 esv2384996 1 8668770 8669211 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4771378 M 1 0 1 "" NA18507 esv2743530 1 8668823 8669178 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954730,essv6776928,essv6668936,essv6847001,essv6961541,essv6859177 M 96 0 6 "" SSM026,SSM027,SSM031,SSM067,SSM086,SSM088 esv2743541 1 8668925 8669081 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954730,essv6961541,essv6668936,essv6847001,essv6859177 M 96 0 5 "" SSM026,SSM027,SSM031,SSM086,SSM088 esv2743552 1 8668968 8669042 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954730,essv6961541,essv6859177,essv6847001 M 96 0 4 "" SSM026,SSM027,SSM086,SSM088 nsv953453 1 8702942 8715041 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001734 M 1 1 0 "" BILGI_BIOE esv25426 1 8706384 8714853 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17965 M 40 0 1 "" NA18508 nsv945760 1 8748916 8751645 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752632,nssv1752592,nssv1752676,nssv1752598,nssv1752678,nssv1752591,nssv1752611,nssv1752600,nssv1752615,nssv1752589,nssv1752656,nssv1752661,nssv1752610,nssv1752593,nssv1752651,nssv1752590,nssv1752677,nssv1752596,nssv1752668,nssv1752587,nssv1752608,nssv1752664,nssv1752628,nssv1752662,nssv1752624,nssv1752667,nssv1752655,nssv1752586,nssv1752627,nssv1752670,nssv1752659,nssv1752669,nssv1752620,nssv1752595,nssv1752618,nssv1752588,nssv1752675,nssv1752663,nssv1752671,nssv1752594,nssv1752607,nssv1752603,nssv1752660,nssv1752602,nssv1752630,nssv1752666,nssv1752606,nssv1752585,nssv1752644,nssv1752665,nssv1752636,nssv1752597,nssv1752619,nssv1752601,nssv1752631,nssv1752599,nssv1752621,nssv1752654,nssv1752584,nssv1752652,nssv1752616,nssv1752642,nssv1752641,nssv1752673,nssv1752679,nssv1752604,nssv1752638,nssv1752640,nssv1752672,nssv1752658,nssv1752634,nssv1752645,nssv1752648,nssv1752626,nssv1752680,nssv1752637,nssv1752623,nssv1752649,nssv1752613,nssv1752609,nssv1752639,nssv1752622,nssv1752643,nssv1752605,nssv1752612,nssv1752617,nssv1752646,nssv1752633,nssv1752674,nssv1752635,nssv1752657,nssv1752653,nssv1752629,nssv1752647,nssv1752614,nssv1752625,nssv1752650 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv1854 1 8766096 8799631 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7349 M 9 1 0 "" NA12156 nsv945761 1 8785164 8789641 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752688,nssv1752713,nssv1752686,nssv1752722,nssv1752695,nssv1752739,nssv1752758,nssv1752711,nssv1752766,nssv1752753,nssv1752685,nssv1752770,nssv1752687,nssv1752708,nssv1752690,nssv1752748,nssv1752693,nssv1752732,nssv1752761,nssv1752719,nssv1752759,nssv1752768,nssv1752696,nssv1752726,nssv1752684,nssv1752723,nssv1752764,nssv1752702,nssv1752697,nssv1752728,nssv1752691,nssv1752701,nssv1752689,nssv1752774,nssv1752692,nssv1752729,nssv1752694,nssv1752735,nssv1752698,nssv1752714,nssv1752699,nssv1752705,nssv1752700,nssv1752724,nssv1752763,nssv1752757,nssv1752683,nssv1752756,nssv1752762,nssv1752741,nssv1752682,nssv1752765,nssv1752767,nssv1752725,nssv1752760,nssv1752752,nssv1752717,nssv1752773,nssv1752681,nssv1752704,nssv1752715,nssv1752707,nssv1752746,nssv1752721,nssv1752716,nssv1752712,nssv1752742,nssv1752771,nssv1752751,nssv1752775,nssv1752777,nssv1752738,nssv1752749,nssv1752709,nssv1752747,nssv1752769,nssv1752731,nssv1752745,nssv1752737,nssv1752720,nssv1752740,nssv1752733,nssv1752750,nssv1752718,nssv1752772,nssv1752736,nssv1752776,nssv1752727,nssv1752706,nssv1752755,nssv1752734,nssv1752710,nssv1752744,nssv1752754,nssv1752730,nssv1752703,nssv1752743 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945762 1 8823310 8836744 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752785,nssv1752824,nssv1752794,nssv1752831,nssv1752784,nssv1753253,nssv1752795,nssv1753242,nssv1753248,nssv1752807,nssv1753246,nssv1753239,nssv1753254,nssv1753238,nssv1752787,nssv1753241,nssv1752790,nssv1753236,nssv1752788,nssv1752798,nssv1753247,nssv1752830,nssv1752781,nssv1753256,nssv1752791,nssv1752806,nssv1752780,nssv1753261,nssv1752786,nssv1752819,nssv1752792,nssv1752808,nssv1753252,nssv1752827,nssv1752789,nssv1753244,nssv1753249,nssv1752817,nssv1752793,nssv1752803,nssv1752797,nssv1753260,nssv1752782,nssv1752833,nssv1753255,nssv1752816,nssv1752796,nssv1753258,nssv1752779,nssv1752823,nssv1753251,nssv1752829,nssv1753250,nssv1752822,nssv1752783,nssv1753264,nssv1752800,nssv1752838,nssv1753233,nssv1752825,nssv1753257,nssv1753265,nssv1753263,nssv1753235,nssv1752832,nssv1753259,nssv1752826,nssv1752820,nssv1752821,nssv1753237,nssv1753243,nssv1752804,nssv1753262,nssv1752839,nssv1752805,nssv1752812,nssv1752836,nssv1752813,nssv1752811,nssv1753240,nssv1752802,nssv1752837,nssv1752840,nssv1753245,nssv1752801,nssv1752809,nssv1752818,nssv1752834,nssv1752835,nssv1752799,nssv1752810,nssv1752814,nssv1753234,nssv1752815,nssv1752841,nssv1752778,nssv1752828 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2758919 1 8828182 8856581 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757721 M 270 1 0 "" NA18863 nsv545345 1 8831066 9035551 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709653 M 17421 1 0 "" nsv945763 1 8893567 8903950 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753351,nssv1753338,nssv1753281,nssv1753331,nssv1753279,nssv1753323,nssv1753282,nssv1753358,nssv1753285,nssv1753303,nssv1753343,nssv1753324,nssv1753271,nssv1753301,nssv1753270,nssv1753327,nssv1753345,nssv1753292,nssv1753280,nssv1753290,nssv1753284,nssv1753335,nssv1753275,nssv1753299,nssv1753273,nssv1753329,nssv1753278,nssv1753330,nssv1753352,nssv1753288,nssv1753344,nssv1753293,nssv1753272,nssv1753362,nssv1753268,nssv1753297,nssv1753283,nssv1753337,nssv1753277,nssv1753306,nssv1753269,nssv1753300,nssv1753346,nssv1753357,nssv1753276,nssv1753353,nssv1753349,nssv1753313,nssv1753274,nssv1753316,nssv1753348,nssv1753310,nssv1753267,nssv1753322,nssv1753347,nssv1753339,nssv1753359,nssv1753291,nssv1753304,nssv1753319,nssv1753350,nssv1753321,nssv1753318,nssv1753305,nssv1753317,nssv1753286,nssv1753354,nssv1753341,nssv1753333,nssv1753342,nssv1753334,nssv1753315,nssv1753302,nssv1753312,nssv1753332,nssv1753326,nssv1753336,nssv1753328,nssv1753356,nssv1753294,nssv1753308,nssv1753360,nssv1753325,nssv1753287,nssv1753355,nssv1753340,nssv1753266,nssv1753320,nssv1753311,nssv1753298,nssv1753296,nssv1753307,nssv1753361,nssv1753314,nssv1753309,nssv1753295,nssv1753289 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945764 1 8905759 8909839 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753370,nssv1753424,nssv1753376,nssv1753432,nssv1753378,nssv1753431,nssv1753382,nssv1753398,nssv1753377,nssv1753408,nssv1753368,nssv1753434,nssv1753442,nssv1753363,nssv1753373,nssv1753404,nssv1753440,nssv1753451,nssv1753372,nssv1753454,nssv1753375,nssv1753392,nssv1753446,nssv1753452,nssv1753379,nssv1753436,nssv1753441,nssv1753389,nssv1753381,nssv1753411,nssv1753367,nssv1753409,nssv1753365,nssv1753405,nssv1753449,nssv1753433,nssv1753374,nssv1753428,nssv1753380,nssv1753406,nssv1753369,nssv1753393,nssv1753443,nssv1753386,nssv1753371,nssv1753426,nssv1753448,nssv1753400,nssv1753366,nssv1753427,nssv1753445,nssv1753399,nssv1753444,nssv1753420,nssv1753364,nssv1753456,nssv1753385,nssv1753425,nssv1753402,nssv1753415,nssv1753410,nssv1753439,nssv1753394,nssv1753387,nssv1753458,nssv1753453,nssv1753421,nssv1753437,nssv1753416,nssv1753419,nssv1753397,nssv1753418,nssv1753413,nssv1753384,nssv1753391,nssv1753401,nssv1753403,nssv1753457,nssv1753430,nssv1753423,nssv1753395,nssv1753407,nssv1753396,nssv1753422,nssv1753390,nssv1753412,nssv1753438,nssv1753383,nssv1753447,nssv1753417,nssv1753414,nssv1753459,nssv1753435,nssv1753450,nssv1753429,nssv1753455,nssv1753388 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2670913 1 8916833 8918033 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5746434,essv6311641 M 1151 0 2 "" HG01108,NA18523 nsv527110 1 8931082 8931814 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703492 M 2026 0 1 "" esv2763506 1 8941428 8967855 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7031523 M 1109 1 0 "" SW_1056 nsv1965 1 8943679 8947598 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3239 M 9 1 0 "" NA12878 esv2762130 1 8947497 8952678 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004941 M 1109 0 1 "" RW_0183 nsv516097 1 8949347 8951663 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv669183,nssv671111,nssv671923,nssv660728,nssv666175,nssv660579,nssv692368,nssv671439,nssv660321 M 2026 0 9 "" nsv471857 1 8960658 8960658 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020083 M 9 1 0 "" NA18555 nsv526389 1 8978963 8989813 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702688 M 2026 0 1 "" esv2763512 1 8978963 8996448 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7031634 M 1109 0 1 "" SW_1309 nsv462616 1 8998487 9020907 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538732 M 1557 1 0 "" HGDP00806 nsv525092 1 8998487 9020907 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701151 M 2026 1 0 "" nsv545346 1 8998487 9020907 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173657 M 17421 1 0 "" HGDP00806 nsv462727 1 9020352 9072997 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv538823 M 1557 0 1 "" 1780854205_A nsv545347 1 9020352 9072997 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173658 M 17421 0 1 "" 1780854205_A esv2669366 1 9030029 9030616 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5962881,essv5573944 M 1151 0 2 "" NA19257,NA19469 nsv831981 1 9031658 9187508 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442663 M 95 0 1 "" esv1504235 1 9053461 9053461 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3665009 M 2 1 0 "" HuRef esv1740239 1 9053496 9053496 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4265262 M 2 1 0 "" HuRef nsv512717 1 9060896 9061737 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625341 M 1 1 0 "" 1 esv2674776 1 9074064 9076882 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6263075,essv5464964 M 1151 0 2 "" HG01137,NA11919 esv2422210 1 9106517 9214573 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161558 M 181 1 0 "" ND01701 esv2675581 1 9111765 9116258 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6355094 M 1151 0 1 "" NA18983 esv1519481 1 9116185 9116185 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4133256 M 2 1 0 "" HuRef nsv954649 1 9123158 9123339 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000464 M 1 0 1 "" BILGI_BIOE nsv832092 1 9126509 9304543 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442674 M 95 0 1 "" esv3385422 1 9170250 9170914 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652100 M 185 1 0 "" NA19240 esv2677452 1 9228538 9230819 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5621555 M 1151 0 1 "" NA07037 esv2763409 1 9247978 9344958 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7032078,essv7031745,essv7031967,essv7032189,essv7032301,essv7032412,essv7032523,essv7032634,essv7031856 M 1109 9 0 "" SW_0009,SW_0072,SW_0189,SW_0199,SW_0641,SW_1193,SW_1358,SW_1467,SW_1503 dgv96n54 1 9249687 9327385 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545348,nsv545351,nsv545352,nsv545358,nsv545359 M 17421 9 0 "" 1780854392_A dgv97n54 1 9249687 9352728 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545357,nsv545356,nsv545355,nsv545349,nsv545354,nsv545353,nsv545360,nsv545361 M 17421 12 0 "" 1780854556_A,1780862066_A,1780862577_A,HGDP00136 esv2743563 1 9250310 9250435 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6718159 M 96 0 1 "" SSM044 dgv2e55 1 9255788 9344634 CNV gain Pinto_et_al_2007 17911159 SNP array esv2750844,esv2750843,esv2750846 M 771 9 0 "" BEC_287,BEC_670,SPC_192 esv23318 1 9257747 9261167 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16429 M 40 0 1 "" NA12749 dgv40e59 1 9257906 9261004 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3335318,esv3394437,esv3446798 M 185 3 0 "" NA19238,NA19239,NA19240 nsv545350 1 9258342 9306793 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709657 M 17421 1 0 "" dgv3n27 1 9258342 9352349 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv463061,nsv462839,nsv462950,nsv463950,nsv463172 M 1557 5 0 "" 1780854392_A,1780854556_A,1780862066_A,1780862577_A,HGDP00136 nsv520191 1 9261182 9336601 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv688630,nssv661584,nssv662674,nssv687341,nssv696393 M 2026 5 0 "" esv2750845 1 9267354 9329159 CNV gain Pinto_et_al_2007 17911159 SNP array essv6985406,essv6980777 M 771 2 0 "" BEC_149 esv2743574 1 9298352 9298416 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6668937 M 96 0 1 "" SSM031 esv2743586 1 9298379 9298507 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6793274 M 96 0 1 "" SSM071 esv2201511 1 9309920 9310343 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4737746 M 1 0 1 "" NA18507 esv1000068 1 9310072 9310072 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571220 M 3 1 0 "" HuRef nsv464172 1 9317805 9353587 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540129 M 1557 0 1 "" 1780854065_A nsv545362 1 9317805 9353587 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173664 M 17421 0 1 "" 1780854065_A nsv827253 1 9371296 9371970 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431791 M 31 0 1 "" AK20 esv2616653 1 9379271 9380942 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5231075 M 1 0 1 "" NA18507 esv2203424 1 9379841 9380493 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4643328 M 1 0 1 "" NA18507 esv2671551 1 9379905 9380457 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5936819,essv6387779,essv5886599,essv6192437,essv5769749,essv6584703,essv6310252,essv6081254,essv6215876,essv6217017,essv5675200,essv5835426,essv5565537,essv5920208,essv6360424,essv6383000,essv6064542,essv5617422,essv6306689,essv5803169 M 1151 0 20 "" HG00638,HG00731,HG01342,HG01551,NA18504,NA18516,NA18871,NA19099,NA19172,NA19350,NA19379,NA19391,NA19396,NA19397,NA19399,NA19448,NA19472,NA19625,NA19684,NA20334 esv2661068 1 9393804 9396492 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6347520 M 1151 0 1 "" NA18530 esv2443842 1 9410354 9411173 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5170213 M 1 1 0 "" NA18507 esv3367825 1 9411101 9412524 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652101 M 185 1 0 "" NA19240 nsv545363 1 9435512 9617795 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709671 M 17421 0 1 "" esv2667953 1 9435883 9437483 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5632014 M 1151 0 1 "" NA12763 nsv517755 1 9454787 9479634 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv658552,nssv653129,nssv693425,nssv692200,nssv661666,nssv670279,nssv674995 M 2026 0 7 "" esv3379170 1 9476706 9478504 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692431 M 185 1 0 "" NA19239 dgv41e59 1 9477406 9478504 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3382125,esv3423918 M 185 2 0 "" NA19238,NA19240 esv2743597 1 9478030 9478457 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6828993 M 96 0 1 "" SSM081 esv2476310 1 9533519 9540080 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5297378 M 1 0 1 "" NA18507 esv2670448 1 9533786 9537833 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6119124,essv6316201,essv6577990,essv5805037,essv6150008,essv5721976,essv6578697,essv5969464,essv5413732,essv5675858,essv6304955,essv5724018,essv5542328,essv6479954,essv6455016,essv5559191,essv6075149,essv5860346,essv6388632,essv6291603,essv6590645,essv5899867,essv6592655,essv5883044,essv6529781,essv5959669,essv5539365,essv6060563,essv6291725,essv5533540,essv5643099,essv6094129,essv6074107,essv6352603,essv5925442,essv6300000,essv5924076,essv5556714,essv5863264 M 1151 0 39 "" NA19313,NA19316,NA19318,NA19319,NA19331,NA19334,NA19347,NA19355,NA19371,NA19372,NA19375,NA19376,NA19382,NA19383,NA19385,NA19391,NA19393,NA19395,NA19404,NA19429,NA19430,NA19431,NA19434,NA19436,NA19438,NA19443,NA19448,NA19449,NA19451,NA19452,NA19455,NA19456,NA19463,NA19466,NA19467,NA19468,NA19470,NA19471,NA19473 esv2577357 1 9534845 9538237 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5368321 M 1 0 1 "" NA18507 esv2743608 1 9535398 9537606 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6750588,essv6816654,essv6874695,essv6721998,essv6718832,essv6784488,essv6742129,essv6748231,essv6764149,essv6910033,essv6679158,essv6759034,essv6937670,essv6733474,essv6761846,essv6756544,essv6718821,essv6744927,essv6916607,essv6714234 M 96 0 19 "" SSM003,SSM007,SSM008,SSM009,SSM010,SSM015,SSM022,SSM033,SSM043,SSM045,SSM049,SSM053,SSM055,SSM057,SSM059,SSM061,SSM062,SSM063,SSM092 esv2666637 1 9535553 9537607 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6547728,essv5402926,essv6496599,essv5579610,essv6597098,essv5792062,essv6541409,essv5712137,essv6520259,essv6114540,essv6520532,essv5424861,essv6473109,essv5401906,essv6525440,essv6060052,essv6587272,essv5745120,essv6467205,essv6230142,essv6510724,essv6246538,essv6564173,essv5588201,essv6528203,essv5617752,essv6475668,essv5699651,essv6473056,essv6264189,essv6561264,essv5676778,essv6563175,essv6153640,essv6545500,essv5559182,essv6501221,essv5906162,essv6556181,essv5621312,essv6487294,essv6340793,essv6587994,essv5700797,essv6579350,essv5683474,essv6481306,essv5706065,essv6489236,essv6416876,essv6464974,essv5833999,essv6538085,essv6305789,essv6591424,essv6020131,essv6542241,essv5624447,essv6295407,essv6373691,essv5817852,essv6187086,essv5599325,essv5500317,essv5508025,essv6414978,essv5521458,essv6363620,essv5726125,essv5747117,essv5928034,essv6341641,essv5487347,essv5748588,essv5729759,essv5750620,essv5809168,essv6336274,essv5807091,essv6049171,essv6352752,essv5693721,essv5757075,essv5725552,essv5914542,essv5855519,essv5978811,essv5454005,essv6369639,essv5914429,essv5703400,essv5863475,essv6082670,essv6039710,essv5656239,essv6455193,essv5462748,essv6274153,essv6159056,essv5948513,essv6358998,essv5851346,essv6293735,essv5673208,essv5639628,essv5629956,essv6332118,essv5612888,essv5898392,essv5460453,essv5431428,essv5997424,essv6373430,essv5499670,essv5904380,essv6438640,essv5590412,essv6216034,essv6055603,essv6024779,essv6405803,essv5459265,essv6054306,essv6016837,essv5546164,essv6319968,essv5585645,essv5949081,essv5524841,essv6069973,essv5526813,essv6443580,essv5578756,essv5441131,essv5992767,essv5509662,essv5995200,essv5916025,essv5993111,essv6368599,essv6023935,essv6149150,essv5527703,essv5573133,essv5513388,essv6039895,essv5466430,essv6285075,essv5979472,essv6238842,essv6156214,essv5507614,essv6217789,essv6260032,essv6117717,essv5876905,essv6380723,essv5611294,essv5528227,essv6165464,essv5869329,essv5503240,essv6071094,essv5646574,essv6135014,essv6077547,essv6144493,essv5969273,essv6375360,essv5572624,essv5644461,essv5673031,essv5477603,essv5996627,essv6042370,essv6017923,essv5923143,essv5761664,essv5599356,essv6060597,essv5412360,essv6012734,essv6362657,essv5550012,essv5983730,essv6084655,essv5524302,essv5956608,essv6213567,essv6010936,essv5457282,essv5442803,essv6419394,essv6080202,essv6120919,essv5855300,essv5854863 M 1151 0 197 "" HG00114,HG00116,HG00126,HG00131,HG00156,HG00159,HG00180,HG00182,HG00183,HG00186,HG00190,HG00237,HG00245,HG00249,HG00259,HG00266,HG00269,HG00271,HG00276,HG00280,HG00281,HG00313,HG00315,HG00320,HG00323,HG00325,HG00326,HG00329,HG00337,HG00373,HG00403,HG00418,HG00421,HG00436,HG00437,HG00448,HG00449,HG00464,HG00525,HG00531,HG00536,HG00559,HG00560,HG00589,HG00596,HG00611,HG00613,HG00620,HG00625,HG00626,HG00628,HG00629,HG00637,HG00651,HG00654,HG00656,HG00671,HG00689,HG00699,HG00701,HG01079,HG01101,HG01124,HG01197,HG01465,HG01488,NA07048,NA11843,NA11930,NA12249,NA12275,NA12889,NA18489,NA18498,NA18516,NA18520,NA18522,NA18530,NA18534,NA18535,NA18559,NA18560,NA18564,NA18567,NA18574,NA18579,NA18596,NA18597,NA18602,NA18603,NA18606,NA18617,NA18618,NA18622,NA18623,NA18626,NA18627,NA18628,NA18630,NA18631,NA18867,NA18874,NA18910,NA18950,NA18959,NA18980,NA18999,NA19003,NA19004,NA19007,NA19054,NA19056,NA19058,NA19062,NA19063,NA19064,NA19067,NA19082,NA19085,NA19130,NA19138,NA19213,NA19247,NA19248,NA19256,NA19316,NA19318,NA19319,NA19321,NA19324,NA19328,NA19331,NA19334,NA19350,NA19372,NA19376,NA19380,NA19383,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19398,NA19404,NA19430,NA19436,NA19446,NA19448,NA19456,NA19463,NA19471,NA19472,NA19654,NA19655,NA19657,NA19663,NA19679,NA19681,NA19682,NA19684,NA19703,NA19707,NA19711,NA19717,NA19719,NA19723,NA19726,NA19731,NA19749,NA19777,NA19818,NA19819,NA19835,NA19900,NA19901,NA19916,NA19920,NA19982,NA20276,NA20282,NA20317,NA20340,NA20341,NA20508,NA20509,NA20522,NA20530,NA20586,NA20753,NA20758,NA20761,NA20785,NA20802,NA20816,NA20819 nsv957944 1 9535573 9537586 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005160 M 1 0 1 "" BILGI_BIOE esv28451 1 9536114 9537869 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11914,esv15031 M 40 0 5 "" NA18505,NA18907,NA19147,NA19190,NA19257 dgv98n54 1 9536326 9536912 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545364,nsv545365,nsv545368 M 17421 0 25 "" dgv99n54 1 9536326 9537356 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545367,nsv545366,nsv545369 M 17421 0 3 "" dgv100n54 1 9536614 9537826 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545375,nsv545376,nsv545374,nsv545370 M 17421 5 0 "" dgv101n54 1 9536707 9536912 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545372,nsv545371 M 17421 0 6 "" nsv545373 1 9536707 9537669 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709707 M 17421 0 1 "" nsv2076 1 9537159 9571375 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3078 M 9 1 0 "" NA18555 nsv545377 1 9537178 9542904 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709712 M 17421 1 0 "" esv2658500 1 9543927 9548595 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5603879 M 1151 0 1 "" NA19725 esv2660900 1 9559995 9562091 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5875165 M 1151 0 1 "" HG01351 nsv945765 1 9573576 9579057 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753478,nssv1754736,nssv1754769,nssv1754757,nssv1753467,nssv1754788,nssv1753473,nssv1754749,nssv1753476,nssv1754747,nssv1754777,nssv1754735,nssv1753475,nssv1754724,nssv1753479,nssv1754726,nssv1754773,nssv1754786,nssv1753465,nssv1754752,nssv1753474,nssv1754779,nssv1753469,nssv1753485,nssv1753472,nssv1754746,nssv1754775,nssv1754728,nssv1754772,nssv1754731,nssv1754770,nssv1754750,nssv1753462,nssv1754758,nssv1753466,nssv1753480,nssv1753471,nssv1754756,nssv1754778,nssv1754745,nssv1753470,nssv1754783,nssv1753463,nssv1754784,nssv1753477,nssv1754734,nssv1753468,nssv1754781,nssv1754771,nssv1754767,nssv1753464,nssv1753489,nssv1753461,nssv1754733,nssv1754774,nssv1753486,nssv1754732,nssv1753490,nssv1754785,nssv1754725,nssv1753487,nssv1754742,nssv1754776,nssv1754729,nssv1753460,nssv1754739,nssv1754782,nssv1754730,nssv1753481,nssv1754787,nssv1754760,nssv1754761,nssv1753483,nssv1753488,nssv1754764,nssv1754755,nssv1754748,nssv1754768,nssv1754765,nssv1754759,nssv1754727,nssv1754780,nssv1754762,nssv1754738,nssv1754753,nssv1754744,nssv1753491,nssv1754751,nssv1754740,nssv1753484,nssv1753482,nssv1754743,nssv1754763,nssv1754754,nssv1754741,nssv1754766,nssv1754737 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474814 1 9584588 9584588 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018493 M 9 1 0 "" NA18956 esv2743619 1 9592449 9592875 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6929053,essv6950542 M 96 0 2 "" SSM020,SSM025 nsv2187 1 9607238 9633692 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3119,nssv3334,nssv4948,nssv9906,nssv10282,nssv1500,nssv6883 M 9 7 0 "" NA12156,NA12878,NA18507,NA18555,NA18956,NA19129,NA19240 nsv508847 1 9612137 9678831 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619767,nssv623772,nssv621081 M 4 3 0 "" NA10860,NA15510,NA18994 esv1010171 1 9623950 9625462 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565355 M 3 1 0 "" HuRef nsv832203 1 9666574 9800151 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442685 M 95 0 1 "" esv3302499 1 9680291 9680507 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7730969,essv7731291,essv7731648 M 185 0 0 "" NA19238,NA19239,NA19240 esv3377271 1 9680304 9680518 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670923,essv8670925,essv8670924 M 185 3 0 "" NA19238,NA19239,NA19240 nsv160151 1 9702538 9706050 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178729 M 24 "" esv2662594 1 9757025 9757488 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6053227,essv6552130,essv5605258,essv6434280 M 1151 0 4 "" HG00133,HG00319,HG01072,NA11893 esv2656500 1 9762183 9765781 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6302894 M 1151 0 1 "" HG00419 nsv827364 1 9762674 9765139 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431975 M 31 0 1 "" NA18972 nsv2298 1 9766228 9797429 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv10302 M 9 0 1 "" NA18956 esv2743630 1 9786414 9796622 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6742130,essv6876687,essv6816665,essv6972326,essv6913992,essv6679159,essv6748242,essv6698597,essv6738802,essv6804396,essv6816573,essv6747767,essv6961542,essv6766533,essv6714235 M 96 0 15 "" SSM001,SSM008,SSM010,SSM012,SSM016,SSM027,SSM029,SSM033,SSM043,SSM052,SSM053,SSM056,SSM064,SSM074,SSM078 dgv11n67 1 9786497 9797313 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827475,nsv827586,nsv827697 M 31 0 4 "" NA18526,NA18564,NA18570,NA18949 nsv498662 1 9786592 9796638 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585382 M 9 0 1 "" esv2669918 1 9786596 9796641 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6563862,essv6384429,essv6373017,essv5432791,essv5746601,essv6368303,essv6071153,essv6207730,essv6393642,essv5839652,essv5819439,essv6221622,essv5530245,essv5926048,essv5825339,essv6349005,essv6404227,essv5548943,essv6321976,essv5789363,essv5462473,essv5731939,essv6020100,essv6597647,essv5888817,essv6204692,essv5834532,essv6265102,essv5830820,essv6003916,essv6457439,essv5521177,essv5811060,essv6161342,essv6112364,essv5512061,essv6015122,essv5455284,essv5990582,essv6481244,essv5834659,essv5923115,essv6204173,essv5505390,essv5931310,essv5988798,essv6069091,essv5893909,essv6235297,essv6349803,essv5900305,essv5424404,essv5893923,essv6452807,essv5714073,essv5845659,essv5628746,essv5440005,essv5617550,essv5451602,essv5549078,essv6023646 M 1151 0 62 "" HG00171,HG00353,HG00422,HG00449,HG00501,HG00513,HG00533,HG00536,HG00537,HG00559,HG00560,HG00592,HG00614,HG00628,HG00629,HG00651,HG00654,HG00672,HG00683,HG00684,HG00689,HG00699,HG00707,HG01048,HG01101,HG01360,HG01462,HG01495,NA18530,NA18548,NA18550,NA18558,NA18572,NA18576,NA18611,NA18619,NA18620,NA18622,NA18623,NA18624,NA18635,NA18636,NA19010,NA19054,NA19060,NA19066,NA19072,NA19074,NA19079,NA19080,NA19083,NA19085,NA19088,NA19371,NA19443,NA19657,NA19664,NA19681,NA19682,NA19723,NA19731,NA19777 dgv102n54 1 9786974 9796629 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545378,nsv545379 M 17421 0 2 "" esv2669984 1 9810652 9813042 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6394000 M 1151 0 1 "" NA20810 nsv545380 1 9858125 9926949 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709715 M 17421 0 1 "" esv2676301 1 9915479 9920205 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6535570 M 1151 0 1 "" HG00607 esv2667343 1 9992637 10003207 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6049608 M 1151 0 1 "" HG01366 esv2671412 1 10007064 10008732 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6220396,essv5525821 M 1151 0 2 "" NA19818,NA19835 esv2664618 1 10007923 10012254 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5774562 M 1151 0 1 "" HG00641 esv3336969 1 10012906 10012906 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740981 M 185 1 0 "" NA19240 nsv527217 1 10033399 10197109 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv703617 M 2026 1 0 "" dgv12e199 1 10035878 10043767 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2671667,esv2663179 M 1151 0 2 "" HG00139,NA11892 nsv945766 1 10052471 10055171 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754866,nssv1754843,nssv1754800,nssv1754854,nssv1754790,nssv1754838,nssv1754793,nssv1754878,nssv1754795,nssv1754884,nssv1754802,nssv1754860,nssv1754806,nssv1754877,nssv1754796,nssv1754816,nssv1754797,nssv1754859,nssv1754875,nssv1754834,nssv1754868,nssv1754837,nssv1754805,nssv1754879,nssv1754870,nssv1754815,nssv1754807,nssv1754850,nssv1754792,nssv1754832,nssv1754794,nssv1754849,nssv1754804,nssv1754882,nssv1754798,nssv1754844,nssv1754803,nssv1754864,nssv1754872,nssv1754883,nssv1754801,nssv1754841,nssv1754869,nssv1754858,nssv1754867,nssv1754862,nssv1754791,nssv1754835,nssv1754871,nssv1754853,nssv1754799,nssv1754820,nssv1754808,nssv1754847,nssv1754874,nssv1754811,nssv1754842,nssv1754846,nssv1754833,nssv1754881,nssv1754814,nssv1754825,nssv1754851,nssv1754823,nssv1754855,nssv1754822,nssv1754852,nssv1754885,nssv1754812,nssv1754831,nssv1754809,nssv1754839,nssv1754817,nssv1754821,nssv1754856,nssv1754818,nssv1754828,nssv1754826,nssv1754827,nssv1754830,nssv1754789,nssv1754824,nssv1754863,nssv1754848,nssv1754819,nssv1754813,nssv1754836,nssv1754865,nssv1754880,nssv1754861,nssv1754829,nssv1754873,nssv1754845,nssv1754840,nssv1754810,nssv1754876,nssv1754857 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522629 1 10065707 10179139 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv706027 M 2026 1 0 "" esv2668231 1 10135587 10136095 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6585488,essv6165979,essv5749006,essv6380147,essv5651943,essv6385363,essv6456159,essv5668584,essv5905869,essv6120065,essv5784275,essv6424150,essv6392345,essv6203017,essv6159229,essv5937528,essv5914513,essv6078091,essv6497289,essv6164323,essv5671433 M 1151 0 21 "" HG00428,NA12003,NA12717,NA18488,NA18522,NA18533,NA18563,NA18593,NA18856,NA19004,NA19085,NA19107,NA19189,NA19235,NA19472,NA19473,NA19701,NA19834,NA19982,NA20503,NA20765 nsv525216 1 10135882 10140516 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701302 M 2026 1 0 "" esv2562286 1 10170337 10171694 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5304967 M 1 0 1 "" NA18507 esv2758920 1 10178012 10522497 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757722 M 270 1 2 "" NA18912,NA18965,NA19130 nsv512718 1 10187550 10188017 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625342 M 1 1 0 "" 1 esv2664632 1 10189522 10192068 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5497140,essv6429175,essv6177818,essv6139852,essv6081874,essv5916833,essv6037479,essv6204148,essv6271813,essv6273252,essv6329801,essv5636176,essv5468908,essv6197999,essv6146888 M 1151 0 15 "" HG01140,NA18873,NA19108,NA19116,NA19315,NA19377,NA19449,NA19463,NA19471,NA19474,NA19625,NA19655,NA19700,NA19704,NA19711 nsv545381 1 10236394 10363930 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709716 M 17421 1 0 "" nsv545382 1 10248968 10317163 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709718,nssv709717 M 17421 0 2 "" nsv477279 1 10272072 10272072 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017679 M 9 1 0 "" NA18517 esv2743641 1 10274306 10275324 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821172,essv6876698,essv6950152,essv6780860,essv6773430,essv6972327,essv6950543,essv6764150,essv6913993,essv6784499,essv6696983,essv6759035,essv6921705,essv6954731,essv6748253,essv6750589,essv6916618,essv6738803,essv6937671,essv6707257,essv6742132,essv6753488,essv6925681,essv6729612,essv6895842,essv6784986,essv6692753,essv6853224,essv6710573,essv6668938,essv6871706,essv6847002,essv6735970,essv6714236 M 96 0 34 "" SSM003,SSM004,SSM008,SSM009,SSM012,SSM016,SSM018,SSM019,SSM022,SSM025,SSM026,SSM029,SSM031,SSM037,SSM038,SSM041,SSM042,SSM043,SSM047,SSM050,SSM052,SSM053,SSM057,SSM058,SSM061,SSM063,SSM066,SSM068,SSM069,SSM079,SSM086,SSM087,SSM091,SSM099 esv2743652 1 10274508 10274972 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821172,essv6876698,essv6780860,essv6950152,essv6773430,essv6913993,essv6784499,essv6696983,essv6748253,essv6954731,essv6937671,essv6707257,essv6729612,essv6895842,essv6925681,essv6784986,essv6692753,essv6853224,essv6710573,essv6950543,essv6668938,essv6871706,essv6847002,essv6714236 M 96 0 24 "" SSM004,SSM008,SSM009,SSM012,SSM016,SSM019,SSM022,SSM025,SSM026,SSM031,SSM037,SSM038,SSM041,SSM042,SSM043,SSM047,SSM066,SSM068,SSM069,SSM079,SSM086,SSM087,SSM091,SSM099 esv4531 1 10274646 10274874 CNV loss Wang_et_al_2008 18987735 Sequencing essv26972 M 1 0 1 "" YH esv2550823 1 10291921 10293205 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5364930 M 1 0 1 "" NA18507 nsv2409 1 10306032 10328178 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3425 M 9 1 0 "" NA12878 dgv1n17 1 10306429 10327646 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nsv437201,nsv437200 M 60 0 2 "" NA18500,NA18914 nsv436146 1 10308808 10318951 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466361 M 2 0 1 "" NA18505 nsv8102 1 10308912 10318788 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv24611,nssv26885,nssv26900 M 31 0 3 "" NA18502,NA18853,NA19132 esv23835 1 10309360 10318827 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv12065 M 40 0 4 "" NA18502,NA18505,NA18508,NA18861 esv2657507 1 10309411 10318608 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6391440,essv6049359,essv6497190,essv5703986,essv6315385,essv5686174,essv6523702,essv5788710,essv6470107,essv5408544,essv6197273,essv5415425,essv6457207,essv5621291,essv6304472,essv6032068,essv6232622,essv5958414,essv6438243,essv6579722,essv6142163,essv6334780,essv6575060,essv6351408,essv6409473,essv6440119,essv6365915 M 1151 0 27 "" NA18499,NA18501,NA18502,NA18505,NA18508,NA18510,NA18867,NA18868,NA18908,NA18912,NA19130,NA19213,NA19235,NA19238,NA19248,NA19355,NA19359,NA19374,NA19395,NA19434,NA19444,NA19452,NA19461,NA19664,NA19703,NA19707,NA19819 esv2421759 1 10309488 10317925 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5118117,essv5131012,essv5151358,essv5104647,essv5029372,essv5110636,essv5117819,essv5072375,essv5048097,essv5066898,essv5124066,essv5146221,essv5031808,essv5073299,essv5011913,essv5028433,essv5158917,essv5098414,essv5032695,essv5093833,essv5142692,essv5011379,essv5012723,essv5103254,essv5074473,essv5084373,essv5033256,essv5071040,essv5049783,essv5081479,essv5145827,essv5145720,essv5107159,essv5053735,essv5075248,essv5087410,essv5100113,essv5037021,essv5005447,essv5089301,essv5155081,essv5062929,essv5060455,essv5014103,essv5064063,essv5077233,essv5033654,essv5031784,essv5095610,essv5141223,essv5030658,essv5131639,essv5054475,essv5013970,essv5131248,essv5045696,essv5062374,essv5059809,essv5109789 M 1184 0 59 "" NA18497,NA18499,NA18500,NA18501,NA18505,NA18506,NA18508,NA18510,NA18853,NA18854,NA18861,NA18863,NA18867,NA18868,NA18869,NA18912,NA18913,NA18914,NA18933,NA18935,NA19118,NA19130,NA19132,NA19176,NA19179,NA19180,NA19184,NA19185,NA19186,NA19192,NA19198,NA19207,NA19213,NA19215,NA19235,NA19237,NA19238,NA19248,NA19249,NA19314,NA19359,NA19374,NA19434,NA19444,NA19452,NA19664,NA19703,NA19705,NA19819,NA20294,NA20295,NA20297,NA20322,NA20348,NA21300,NA21418,NA21441,NA21520,NA21613 nsv515546 1 10310254 10313445 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv660763,nssv658241,nssv686246,nssv667908,nssv671141,nssv657555,nssv695737,nssv687648,nssv654559,nssv656381,nssv690144,nssv666539,nssv690059,nssv679262,nssv680418,nssv682975,nssv658813,nssv676915,nssv680299,nssv667133,nssv663872,nssv691095,nssv656820 M 2026 0 23 "" nsv545383 1 10310254 10313445 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173665 M 17421 0 1 "" HGDP00923 nsv818666 1 10310254 10313445 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417808,nssv1417809,nssv1418422,nssv1416820 M 112 0 4 "" NA18853,NA18854,NA19192,NA19238 nsv545384 1 10310254 10317163 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709719 M 17421 0 1 "" esv2764182 1 10310344 10317925 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7004958,essv7004946,essv7004943,essv7004942,essv7004945,essv7004947,essv7004949,essv7004953,essv7004948,essv7004950,essv7004957,essv7004952,essv7004951,essv7004956,essv7004954 M 1109 0 15 "" RW_0014,RW_0028,RW_0155,RW_0178,RW_0201,RW_0220,RW_0258,RW_0266,RW_0306,RW_0329,RW_0538,RW_0576,RW_0616,RW_0653,RW_0660 nsv441678 1 10310483 10317925 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617891,nssv1617769,nssv1617813,nssv1617713,nssv1617869,nssv1617736,nssv1617802,nssv1617824,nssv1617847,nssv1617836,nssv1617747,nssv1617858,nssv1617780,nssv1617880,nssv1617902,nssv1617758,nssv1617725,nssv1617791 M 270 0 18 "" NA18500,NA18501,NA18502,NA18505,NA18506,NA18508,NA18853,NA18854,NA18861,NA18863,NA18912,NA18913,NA18914,NA19130,NA19132,NA19192,NA19207,NA19238 nsv513981 1 10310796 10317904 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2845155,nssv2845150,nssv2845158,nssv2845140,nssv2845149,nssv2845154,nssv2845139,nssv2843659,nssv2845161,nssv2845151,nssv2845144,nssv2845159,nssv2845141,nssv2845142,nssv2845145,nssv2845163,nssv2845157,nssv2845138,nssv2845160,nssv2845152,nssv2845137,nssv2845162,nssv2845156,nssv2845153,nssv2845166,nssv2845167,nssv2845147,nssv2845143,nssv2845146,nssv2845148,nssv2845164,nssv2845165,nssv2843660 M 2366 0 33 "" NA18497,NA18499,NA18500,NA18501,NA18506,NA18508,NA18510,NA18853,NA18854,NA18861,NA18863,NA18867,NA18868,NA18869,NA18908,NA18933,NA18935,NA19118,NA19130,NA19132,NA19179,NA19180,NA19184,NA19185,NA19186,NA19192,NA19198,NA19207,NA19235,NA19237,NA19248,NA19249,NA21441 nsv437970 1 10315121 10318358 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv467852,nssv467741,nssv468074,nssv467963,nssv471534,nssv468185 M 269 0 6 "" NA18500,NA18502,NA18912,NA18914,NA19130,NA19132 esv2764192 1 10323676 10534129 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7004960,essv7004959 M 1109 2 0 "" RW_0575,RW_0621 nsv8213 1 10390857 10400382 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28055 M 31 1 0 "" NA19221 esv1010529 1 10416138 10418529 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564483 M 3 0 1 "" HuRef nsv8324 1 10421540 10424588 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv24601,nssv28052,nssv29251,nssv28037,nssv11773,nssv24596,nssv24609,nssv26893,nssv28548,nssv12119,nssv21445,nssv24615,nssv29270,nssv26887,nssv24608,nssv26889,nssv28538,nssv26875,nssv28046,nssv21428 M 31 0 20 "" NA07029,NA10839,NA10847,NA12155,NA12740,NA12802,NA18502,NA18504,NA18517,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18972,NA18975,NA18980,NA19132,NA19173 nsv511676 1 10422186 10423740 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626314 M 1 0 1 "" 1 esv7749 1 10422191 10423946 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30190 M 1 0 0 "" dgv12n67 1 10422285 10423585 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv827808,nsv827919 M 31 0 11 "" AK12,AK16,AK20,AK4,NA18526,NA18552,NA18564,NA18951,NA18968,NA18972,NA18997 esv2743663 1 10422377 10423698 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821173,essv6916629,essv6780861,essv6832591,essv6880414,essv6773432,essv6972329,essv6876710,essv6950163,essv6888998,essv6810335,essv6695610,essv6950544,essv6764151,essv6863947,essv6892312,essv6666887,essv6921708,essv6748265,essv6954732,essv6759036,essv6738804,essv6707258,essv6797440,essv6898605,essv6753489,essv6784510,essv6824973,essv6729613,essv6784988,essv6925682,essv6710574,essv6853225,essv6692755,essv6761847,essv6871707,essv6668939,essv6847003,essv6766534,essv6735971,essv6714237 M 96 0 41 "" SSM003,SSM004,SSM006,SSM008,SSM009,SSM012,SSM018,SSM019,SSM025,SSM026,SSM029,SSM030,SSM031,SSM037,SSM041,SSM042,SSM043,SSM047,SSM050,SSM052,SSM058,SSM061,SSM062,SSM063,SSM064,SSM066,SSM068,SSM069,SSM072,SSM076,SSM079,SSM080,SSM082,SSM086,SSM087,SSM089,SSM091,SSM094,SSM097,SSM098,SSM100 esv3677 1 10422395 10423891 CNV loss Wang_et_al_2008 18987735 Sequencing essv26118 M 1 0 1 "" YH esv2663489 1 10422423 10423722 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6398498,essv6077186,essv6590902,essv5785639,essv6423986,essv6145681,essv6426186,essv5519520,essv6501231,essv6154050,essv6586677,essv5947983,essv6371106,essv5590662,essv6338142,essv5897439,essv6440924,essv5651614,essv6378574,essv5838191,essv6519788,essv6213143,essv6358420,essv5744022,essv6517634,essv5697031,essv6545964,essv5691195,essv6386072,essv5547098,essv6320926,essv5830286,essv6389924,essv6045572,essv6594866,essv5483100,essv6515930,essv6109890,essv6523322,essv5926985,essv6488949,essv5794107,essv6581097,essv6189972,essv6594872,essv5698538,essv6485389,essv5764037,essv6428644,essv6153607,essv6531876,essv6079544,essv6434552,essv5845475,essv6365430,essv6036188,essv6504427,essv5664015,essv6427340,essv6129820,essv6543572,essv5705105,essv6497903,essv5697149,essv6429246,essv5987641,essv6587142,essv5802169,essv6421742,essv5708184,essv6443242,essv5824442,essv6554602,essv6270351,essv6543375,essv6293177,essv6358679,essv5772119,essv6414679,essv5731253,essv6327097,essv6105838,essv6552600,essv5982711,essv6481416,essv5806211,essv6337533,essv5485971,essv6543000,essv6001004,essv6337532,essv5454111,essv6414038,essv5757823,essv6546067,essv5462182,essv6490899,essv5687924,essv6476226,essv5764814,essv6353822,essv6309362,essv6416506,essv5970585,essv6452751,essv5735105,essv6570399,essv5410129,essv6561262,essv5879605,essv6486985,essv6170202,essv6556918,essv6108804,essv6375135,essv6070115,essv6328463,essv5707178,essv6553649,essv6300912,essv6319525,essv6234767,essv6523588,essv5735132,essv6556368,essv5754412,essv6321185,essv5697238,essv6445052,essv5869050,essv6515464,essv6258737,essv6499481,essv5800240,essv6594078,essv6003496,essv6391680,essv5948908,essv6502984,essv5697864,essv6403618,essv5730685,essv6593522,essv6004934,essv6571552,essv6009955,essv6585838,essv5453084,essv6332771,essv6309160,essv6475246,essv5747055,essv6453178,essv6072585,essv6497445,essv5565916,essv6445551,essv5713434,essv6405500,essv6226442,essv6544578,essv5763701,essv6495342,essv5711377,essv6481054,essv5613652,essv6350388,essv5543603,essv6564821,essv5638334,essv6571216,essv5774239,essv6343041,essv6275055,essv6529147,essv5532963,essv6569641,essv6150102,essv6367831,essv6255756,essv6569221,essv5717506,essv6454078,essv6122210,essv6534045,essv5749291,essv6573138,essv6020925,essv6446701,essv5853140,essv6333904,essv5547251,essv6489166,essv6202139,essv6473890,essv5759580,essv6505315,essv5791150,essv6500997,essv5763210,essv6361074,essv5658801,essv6331455,essv5451033,essv6545437,essv5825384,essv6466577,essv5750389,essv6452805,essv6258207,essv6520415,essv5656451,essv6327385,essv5704183,essv6414817,essv5656121,essv6516351,essv6309345,essv6535993,essv5793370,essv6362631,essv5786285,essv6516379,essv5843789,essv6384101,essv5810798,essv6359688,essv5884041,essv6498652,essv5740519,essv6346495,essv5546296,essv6368159,essv5734741,essv6453959,essv5941868,essv6521001,essv5777485,essv6437789,essv5951749,essv6407585,essv5560994,essv6462889,essv6087820,essv6494633,essv6055665,essv6524660,essv6225457,essv6544988,essv6285295,essv5654749,essv5810237,essv6037557,essv5497871,essv6211683,essv5736515,essv5824742,essv6174947,essv5644499,essv6183826,essv5448203,essv5864135,essv5893636,essv6129891,essv5740974,essv5941406,essv6083833,essv5705603,essv6236164,essv5825425,essv5740371,essv5543320,essv5832601,essv6309772,essv6159821,essv5931203,essv5442777,essv5649150,essv6037609,essv5818762,essv5694687,essv6213237,essv5742081,essv6217325,essv5446149,essv5789398,essv6044242,essv5479877,essv6214864,essv5668324,essv6009953,essv5487149,essv5795097,essv5828447,essv5719048,essv5433824,essv5666496,essv6174976,essv5710567,essv5512109,essv5593008,essv5713930,essv6082660,essv5906683,essv5682527,essv5742989,essv6232460,essv5683878,essv5539171,essv5929071,essv5438740,essv5400210,essv6267855,essv6233420,essv5830822,essv6293727,essv5804173,essv6215221,essv5651394,essv6040525,essv6083572,essv5728353,essv5874310,essv6310438,essv5507327,essv5997646,essv5562999,essv5546486,essv6020882,essv6141541,essv6197783,essv5403355,essv5932189,essv5923578,essv5441304,essv5657531,essv5918987,essv6196780,essv6219375,essv5977358,essv6023097,essv5443914,essv5429067,essv6249189,essv6283296,essv5478376,essv6259705,essv6181556,essv5863418,essv5502310,essv5645970,essv5594797,essv5541688,essv6003335,essv5919934,essv6303824,essv5506622,essv6053762,essv5926047,essv6191498,essv5561822,essv6168883,essv5446927,essv5434620,essv6053369,essv5608394,essv5534987,essv5631944,essv6147076,essv5437854,essv5446394,essv6243382,essv5463208,essv5855374,essv5980067,essv5629542,essv6179259,essv5859131,essv6191903,essv6249263,essv5671844,essv6078013,essv5955204,essv5665611,essv6117719,essv5927889,essv5494449,essv5886197,essv5611588,essv5947020,essv5656514,essv5507435,essv6280195,essv6116949,essv5671132,essv5540041,essv5996708,essv5658131,essv6193031,essv5890037,essv5999646,essv5569875,essv5893598,essv5583001,essv5840040,essv6079804,essv5847871,essv5397699,essv5646061,essv6261410,essv5647922,essv5416517,essv6184452,essv5887286,essv6215283,essv6148345,essv6120754,essv6152646,essv5653298,essv5943111,essv5598583,essv5437468,essv6277663,essv5550187,essv5443727,essv5422972,essv6112411,essv5621102,essv6226514,essv5606002,essv5556330,essv5618775,essv6067284,essv5603262,essv5925061,essv5495818,essv6028426,essv6057148,essv5982784,essv5435569,essv6081132,essv5596653,essv5922226,essv5589516,essv5939677,essv5958737,essv5496640,essv5630483,essv6140873,essv5913085,essv5809466,essv5549458,essv5889982,essv6267519,essv5954026,essv5507226,essv5444810,essv5494257,essv5543246,essv6104344,essv6030917,essv6292755,essv5637092,essv5645642,essv5460769,essv5979944,essv5925116,essv6166291,essv5753476,essv5978278,essv5660052,essv6041397,essv6127169,essv5915555,essv6045770,essv6015757,essv5879659,essv6077962,essv5929896,essv6248810,essv6008032,essv5656853,essv5517230,essv5448258,essv5563739,essv5901531,essv5998238,essv6160005,essv6130087,essv5440001,essv5569218,essv5579039,essv5474499,essv5638395,essv5469932,essv6044459,essv6309428,essv5835608,essv5977891,essv6031469,essv6025880,essv6214972,essv5998544,essv6032337,essv6069441,essv5796161,essv6194148,essv5635493,essv5450198,essv6189780,essv5441198,essv5939054,essv5466963,essv5670783,essv5669670,essv6115867,essv6217647,essv6287583,essv5881601,essv5416365,essv5417192,essv5769734,essv5582559,essv5425326,essv6056143,essv5441444,essv6305814,essv6032975,essv6037170,essv5407871,essv5840246,essv6106920,essv6043683,essv5996660,essv5641017,essv5592256,essv5575062,essv5450041,essv5477948,essv6051497,essv6314037,essv6078400,essv5876716,essv6244164,essv6053302,essv5914562,essv5876249,essv6097611,essv6059667 M 1151 0 549 "" HG00096,HG00112,HG00114,HG00116,HG00118,HG00120,HG00124,HG00126,HG00136,HG00137,HG00151,HG00152,HG00156,HG00158,HG00160,HG00177,HG00180,HG00182,HG00185,HG00187,HG00189,HG00190,HG00232,HG00239,HG00242,HG00244,HG00247,HG00250,HG00251,HG00253,HG00257,HG00262,HG00264,HG00267,HG00268,HG00270,HG00271,HG00273,HG00274,HG00275,HG00276,HG00277,HG00280,HG00281,HG00282,HG00285,HG00306,HG00311,HG00312,HG00313,HG00315,HG00318,HG00320,HG00324,HG00326,HG00328,HG00329,HG00330,HG00334,HG00336,HG00339,HG00344,HG00377,HG00403,HG00404,HG00418,HG00419,HG00427,HG00436,HG00442,HG00443,HG00448,HG00475,HG00476,HG00479,HG00525,HG00531,HG00534,HG00536,HG00543,HG00554,HG00556,HG00557,HG00559,HG00560,HG00565,HG00577,HG00578,HG00581,HG00584,HG00590,HG00592,HG00593,HG00595,HG00607,HG00608,HG00610,HG00611,HG00613,HG00614,HG00620,HG00625,HG00626,HG00628,HG00634,HG00635,HG00641,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00663,HG00671,HG00683,HG00684,HG00692,HG00693,HG00699,HG00701,HG00702,HG00704,HG00707,HG00708,HG00732,HG00737,HG01047,HG01048,HG01051,HG01055,HG01060,HG01061,HG01066,HG01069,HG01070,HG01073,HG01075,HG01079,HG01080,HG01082,HG01098,HG01102,HG01107,HG01108,HG01112,HG01124,HG01125,HG01134,HG01136,HG01137,HG01140,HG01148,HG01149,HG01167,HG01171,HG01174,HG01182,HG01187,HG01188,HG01191,HG01197,HG01198,HG01204,HG01250,HG01251,HG01334,HG01350,HG01354,HG01356,HG01357,HG01365,HG01366,HG01374,HG01375,HG01377,HG01378,HG01383,HG01384,HG01390,HG01437,HG01440,HG01441,HG01461,HG01462,HG01492,HG01494,HG01497,HG01498,HG01521,HG01550,HG01551,NA06985,NA06994,NA07000,NA07037,NA07051,NA07056,NA07347,NA07357,NA11829,NA11840,NA11843,NA11919,NA11930,NA11933,NA11992,NA11995,NA12003,NA12004,NA12005,NA12006,NA12045,NA12046,NA12058,NA12144,NA12155,NA12272,NA12273,NA12275,NA12341,NA12347,NA12348,NA12400,NA12414,NA12546,NA12717,NA12748,NA12749,NA12750,NA12751,NA12763,NA12775,NA12776,NA12778,NA12828,NA12829,NA12830,NA12842,NA12843,NA12878,NA12892,NA18486,NA18487,NA18488,NA18489,NA18498,NA18499,NA18501,NA18502,NA18504,NA18505,NA18508,NA18517,NA18519,NA18522,NA18526,NA18530,NA18533,NA18534,NA18535,NA18538,NA18544,NA18549,NA18550,NA18552,NA18555,NA18558,NA18560,NA18563,NA18564,NA18565,NA18572,NA18577,NA18595,NA18603,NA18610,NA18612,NA18615,NA18617,NA18620,NA18621,NA18624,NA18627,NA18628,NA18630,NA18632,NA18633,NA18634,NA18635,NA18638,NA18853,NA18856,NA18861,NA18867,NA18868,NA18870,NA18871,NA18873,NA18874,NA18907,NA18908,NA18909,NA18910,NA18912,NA18916,NA18923,NA18924,NA18933,NA18934,NA18943,NA18948,NA18950,NA18951,NA18956,NA18963,NA18967,NA18968,NA18971,NA18972,NA18975,NA18976,NA18980,NA18983,NA18984,NA18987,NA18989,NA18991,NA19000,NA19004,NA19005,NA19007,NA19012,NA19055,NA19057,NA19060,NA19062,NA19065,NA19067,NA19068,NA19072,NA19075,NA19079,NA19082,NA19085,NA19087,NA19092,NA19093,NA19102,NA19108,NA19114,NA19116,NA19119,NA19129,NA19130,NA19137,NA19138,NA19147,NA19172,NA19190,NA19198,NA19201,NA19207,NA19209,NA19210,NA19213,NA19223,NA19225,NA19235,NA19236,NA19238,NA19248,NA19256,NA19257,NA19311,NA19312,NA19316,NA19317,NA19318,NA19321,NA19324,NA19327,NA19328,NA19338,NA19346,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19377,NA19380,NA19381,NA19383,NA19384,NA19385,NA19390,NA19391,NA19394,NA19395,NA19397,NA19398,NA19401,NA19404,NA19428,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19443,NA19444,NA19445,NA19446,NA19448,NA19452,NA19453,NA19455,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19470,NA19472,NA19661,NA19663,NA19664,NA19675,NA19676,NA19678,NA19681,NA19682,NA19685,NA19700,NA19703,NA19707,NA19711,NA19712,NA19713,NA19716,NA19719,NA19720,NA19722,NA19723,NA19725,NA19726,NA19728,NA19731,NA19732,NA19746,NA19747,NA19749,NA19750,NA19755,NA19756,NA19761,NA19762,NA19770,NA19773,NA19774,NA19777,NA19779,NA19782,NA19783,NA19786,NA19818,NA19819,NA19835,NA19908,NA19914,NA19917,NA19920,NA19921,NA19982,NA20126,NA20281,NA20291,NA20294,NA20299,NA20314,NA20317,NA20322,NA20332,NA20334,NA20341,NA20342,NA20346,NA20348,NA20506,NA20510,NA20512,NA20515,NA20518,NA20521,NA20524,NA20525,NA20526,NA20527,NA20530,NA20533,NA20535,NA20536,NA20537,NA20539,NA20544,NA20581,NA20585,NA20586,NA20588,NA20589,NA20753,NA20755,NA20757,NA20758,NA20759,NA20768,NA20769,NA20770,NA20771,NA20774,NA20775,NA20783,NA20786,NA20790,NA20796,NA20797,NA20798,NA20801,NA20802,NA20804,NA20805,NA20806,NA20807,NA20809,NA20810,NA20812,NA20814,NA20818,NA20819,NA20826,NA20828 nsv160262 1 10422424 10423722 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178840 M 24 "" esv2853569 1 10422445 10423744 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123136 M 1 0 1 "" HuRef esv26404 1 10422493 10423450 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14503 M 40 0 7 "" NA07037,NA12004,NA12749,NA15510,NA18517,NA18909,NA19129 dgv103n54 1 10422526 10423110 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545390,nsv545385,nsv545386,nsv545388 M 17421 4 0 "" dgv104n54 1 10422526 10423399 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545392,nsv545391,nsv545389,nsv545387 M 17421 0 188 "" nsv545393 1 10422944 10423399 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709912 M 17421 0 1 "" nsv545394 1 10423104 10423399 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709920,nssv709914,nssv709913,nssv709917,nssv709916,nssv709919,nssv709915,nssv709918 M 17421 0 8 "" esv2743674 1 10482528 10489200 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6756545 M 96 0 1 "" SSM059 esv2662921 1 10483496 10485937 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6400559,essv6081180,essv6578484,essv5786737,essv5809170,essv6283446,essv5653749,essv5518392,essv5923144,essv6012579,essv5967521 M 1151 0 11 "" NA18499,NA19138,NA19313,NA19338,NA19347,NA19372,NA19380,NA19399,NA19713,NA20296,NA20317 esv2421360 1 10483779 10484989 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5102680,essv5005178,essv5074992,essv5160849,essv5023863,essv5094667,essv5010570,essv5151853,essv5148686,essv5118967,essv5138311,essv5115009,essv5142946,essv5151994,essv5111430,essv5122639,essv5160550,essv5145841,essv5043282,essv5057594,essv5087529,essv5072629,essv5079670,essv5120264,essv5154504,essv5030172,essv5037011,essv5061676,essv5099736,essv5125662,essv5088559 M 1184 0 31 "" NA07045,NA18497,NA18499,NA18870,NA18917,NA18930,NA19010,NA19041,NA19098,NA19138,NA19178,NA19180,NA19192,NA19194,NA19347,NA19399,NA19713,NA19983,NA20288,NA21295,NA21333,NA21339,NA21356,NA21390,NA21399,NA21401,NA21418,NA21436,NA21634,NA21636,NA21682 nsv2521 1 10493473 10538114 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7460 M 9 0 1 "" NA12156 nsv8435 1 10508127 10512317 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv24613 M 31 1 0 "" NA18942 nsv545395 1 10524615 10553603 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709921 M 17421 0 1 "" esv2665377 1 10576551 10583990 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6439025,essv5972417,essv6473433,essv6184945,essv6424485,essv5706757,essv6575127,essv6306352,essv5429703,essv5594923,essv5984430,essv5520917,essv6051253,essv6246970,essv6266846 M 1151 0 15 "" HG00531,HG00580,HG00595,HG00610,HG00650,HG00654,HG00692,NA18545,NA18560,NA18574,NA18596,NA18627,NA18631,NA19072,NA19088 esv2743685 1 10576552 10583993 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821174,essv6892313,essv6689252,essv6874696,essv6859178,essv6832592,essv6773433,essv6916640,essv6669155,essv6679160,essv6863948,essv6666889,essv6748276,essv6898606,essv6839962,essv6883252,essv6925683,essv6853226,essv6902524 M 96 0 19 "" SSM003,SSM005,SSM008,SSM013,SSM019,SSM030,SSM033,SSM036,SSM066,SSM079,SSM082,SSM084,SSM087,SSM088,SSM089,SSM092,SSM095,SSM098,SSM100 nsv517464 1 10578547 10583140 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv652091,nssv681545,nssv679135,nssv683372,nssv693755,nssv685750 M 2026 0 6 "" nsv818777 1 10578547 10583140 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417173 M 112 0 1 "" NA18550 esv275132 1 10596267 10597855 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2586077 M 1250 0 1 "" dgv105n54 1 10613037 10736809 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545397,nsv545396,nsv545398,nsv545399,nsv545402 M 17421 0 5 "" 1780862093_A,1780862573_A dgv4n27 1 10613137 10736809 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv465061,nsv464505 M 1557 0 2 "" 1780862093_A,1780862573_A nsv953454 1 10616244 10724643 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001745 M 1 0 1 "" BILGI_BIOE esv29966 1 10616743 10814095 CNV loss Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv84205 M 2 0 1 "" HuRef nsv828030 1 10617505 10735104 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1436327 M 31 1 0 "" NA18542 nsv545400 1 10624041 10781964 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709925 M 17421 0 1 "" nsv464949 1 10630891 10697142 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv540805 M 1557 0 1 "" 1780862345_A nsv545401 1 10630891 10697142 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173667 M 17421 0 1 "" 1780862345_A nsv525693 1 10634068 10780848 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701852 M 2026 0 1 "" nsv828141 1 10635420 10644140 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1423940 M 31 1 0 "" NA18947 nsv828252 1 10637753 10642977 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1433409 M 31 1 0 "" NA18526 nsv828364 1 10637753 10704107 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440798 M 31 1 0 "" NA18969 nsv436924 1 10644631 10672212 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv466805 M 60 0 1 "" NA10847 nsv832314 1 10644754 10799862 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442696,nssv1442707,nssv1442718 M 95 0 3 "" nsv438081 1 10646034 10657540 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468407,nssv468296 M 269 0 2 "" NA10847,NA12146 nsv545403 1 10649384 10690375 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709926 M 17421 0 1 "" nsv508858 1 10650567 10753153 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619768 M 4 1 0 "" NA10860 nsv818888 1 10659588 10690375 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417515 M 112 0 1 "" NA18968 dgv42e59 1 10661208 10663006 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3359154,esv3385957,esv3442563 M 185 3 0 "" NA19238,NA19239,NA19240 esv2743697 1 10661924 10662528 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6843877,essv6675193,essv6859179,essv6876721,essv6793275,essv6703857,essv6696984,essv6954733,essv6682818,essv6797441,essv6868704,essv6725845,essv6853227,essv6929054,essv6789144,essv6946483,essv6813162 M 96 0 17 "" SSM012,SSM020,SSM024,SSM026,SSM032,SSM034,SSM038,SSM040,SSM046,SSM070,SSM071,SSM072,SSM077,SSM085,SSM087,SSM088,SSM090 esv997282 1 10671725 10685592 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564310 M 3 0 1 "" HuRef esv2758921 1 10682445 10995090 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757723 M 270 0 12 "" NA10846,NA10857,NA12234,NA12248,NA18504,NA18558,NA18563,NA18570,NA18854,NA18970,NA18987,NA19143 nsv8546 1 10692870 10696710 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28926,nssv28027 M 31 2 0 "" NA07029,NA12740 nsv465172 1 10697142 10736809 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541028 M 1557 0 1 "" 1780862416_A nsv545404 1 10697142 10736809 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173669 M 17421 0 1 "" 1780862416_A nsv465283 1 10707845 10755364 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541114 M 1557 0 1 "" NINDS_198 nsv545405 1 10707845 10755364 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173670 M 17421 0 1 "" NINDS_198 esv2743708 1 10743969 10745291 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6874698,essv6933297,essv6773434,essv6859180,essv6843878,essv6972330,essv6950545,essv6800709,essv6876732,essv6703858,essv6910034,essv6695621,essv6764155,essv6679161,essv6863949,essv6750590,essv6921709,essv6666890,essv6961543,essv6759037,essv6748287,essv6707259,essv6742133,essv6738805,essv6753490,essv6839963,essv6816676,essv6769510,essv6747768,essv6718843,essv6733475,essv6807366,essv6925685,essv6816574,essv6853228,essv6761848,essv6906092,essv6756546,essv6784521,essv6847004,essv6744928,essv6735972 M 96 0 42 "" SSM002,SSM006,SSM007,SSM008,SSM009,SSM010,SSM012,SSM014,SSM015,SSM018,SSM019,SSM021,SSM025,SSM027,SSM029,SSM030,SSM033,SSM040,SSM041,SSM049,SSM050,SSM052,SSM053,SSM055,SSM056,SSM057,SSM058,SSM059,SSM061,SSM062,SSM063,SSM065,SSM066,SSM075,SSM078,SSM084,SSM085,SSM086,SSM087,SSM088,SSM089,SSM092 esv2743719 1 10744461 10744610 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6859180,essv6863949,essv6707259,essv6906092,essv6807366,essv6847004 M 96 0 6 "" SSM014,SSM041,SSM075,SSM086,SSM088,SSM089 esv3435817 1 10776408 10778706 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691738 M 185 1 0 "" NA19240 esv3443222 1 10777408 10778706 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691739 M 185 1 0 "" NA19238 nsv159406 1 10785169 10785169 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv177984 M 24 "" nsv953455 1 10790144 10797343 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001756 M 1 0 1 "" BILGI_BIOE nsv832425 1 10843788 11062918 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442729,nssv1442741 M 95 0 2 "" dgv43e59 1 10852608 10854206 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3401813,esv3379915 M 185 2 0 "" NA19239,NA19240 esv2418090 1 10853316 10853779 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4522724 M 1 0 1 "" NA18507 esv2659328 1 10853454 10853565 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6516322,essv5711033 M 1151 0 2 "" HG01389,NA19360 nsv545406 1 10855450 10875175 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709927 M 17421 0 1 "" esv27036 1 10891369 10892138 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19765 M 40 0 1 "" NA19147 esv2665603 1 10894205 10896071 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6506565,essv6392155,essv5574397,essv6102736,essv6336021,essv6214075 M 1151 0 6 "" HG00257,HG00327,HG00640,HG01047,HG01188,HG01441 nsv516264 1 10923894 10924505 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv683701,nssv693249,nssv667169,nssv680546,nssv688415,nssv676652,nssv662101,nssv655703 M 2026 0 8 "" esv2576089 1 10933294 10933685 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5340923 M 1 0 1 "" NA18507 nsv508869 1 10956200 11008459 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621082 M 4 1 0 "" NA15510 esv3350549 1 10970823 10971437 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808880 M 185 1 0 "" NA12878 esv2672799 1 10977042 10978052 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6152639,essv5983863 M 1151 0 2 "" HG00159,NA12275 esv1628805 1 10983175 10983912 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3981893 M 2 0 1 "" HuRef esv2662381 1 10987309 10987511 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6411635,essv5547299,essv6545229,essv5903998,essv6321461,essv6232497,essv6335154,essv6130655,essv6305333,essv6196104,essv6559648,essv5525040,essv6350427,essv5743147,essv6346694,essv5439128,essv6596570,essv5720584,essv6508160,essv5871565,essv6512722,essv6062839,essv6308605,essv5584705,essv6433432,essv5766577,essv6299525,essv5573427,essv6538800,essv5442154,essv6583201,essv5868985,essv6539880,essv5851900,essv6523698,essv5709547,essv6316900,essv5434105,essv6437321,essv5564829,essv6332073,essv5697224,essv6539405,essv5693266,essv6404905,essv5973037,essv6448967,essv5457022,essv6584690,essv5679130,essv6321049,essv5826318,essv6326493,essv5538199,essv6333252,essv5738792,essv6346323,essv6253209,essv6534157,essv5739901,essv6561520,essv5795829,essv6316945,essv5995402,essv6409136,essv5473452,essv6548431,essv5751467,essv6508632,essv6225298,essv6415869,essv5474614,essv6287316,essv5569369,essv6287952,essv6053161,essv6329390,essv6154630,essv6431577,essv5750022,essv6402208,essv5739593,essv6574670,essv6241958,essv6361865,essv5470616,essv6445439,essv5699324,essv6290449,essv5816499,essv6335635,essv5704840,essv6269166,essv5689219,essv6362235,essv5783768,essv6583916,essv5717658,essv6375908,essv5713743,essv6555945,essv5786227,essv6465606,essv5823600,essv6418784,essv5805915,essv6467569,essv5781072,essv6515497,essv5530106,essv6357302,essv5976608,essv6346110,essv5425046,essv6442607,essv5683765,essv6279130,essv5666478,essv6337611,essv5960330,essv6305653,essv5681928,essv6380770,essv6263141,essv6559022,essv5717769,essv6353241,essv5524322,essv6528587,essv5767747,essv6471514,essv5936736,essv6439577,essv6221787,essv6513314,essv5701236,essv6416147,essv6149338,essv6300077,essv5825190,essv6424915,essv6128419,essv6096098,essv5853157,essv5505243,essv5966696,essv5599018,essv5615971,essv5451468,essv6190650,essv5525759,essv5430063,essv5696708,essv6220755,essv5648267,essv5697634,essv5545353,essv6146736,essv5485570,essv5607976,essv5555386,essv6240799,essv6162208,essv6170651,essv5561746,essv5639999,essv5497467,essv5962033,essv6007818,essv6045511,essv5778207,essv5960148,essv5400161,essv6220218,essv5485064,essv6114765,essv6202839,essv6009754,essv5548051,essv5868341,essv6176945,essv5630354,essv5940305,essv6068969,essv6193841,essv5458362,essv6252506,essv6227774,essv5517160,essv5557476,essv6202367,essv6201977,essv5855547,essv5939117,essv5612890,essv5920462,essv6236805,essv6091590,essv6260030,essv5452933,essv6021875,essv6049273,essv5947430,essv6138378,essv5549122,essv5530612,essv6064408,essv5869025,essv5447251,essv5930700,essv5655334,essv5672754,essv6093483,essv5583520,essv6053443,essv5441133,essv5980281,essv5582376,essv5579407,essv5931041,essv6236434,essv5488718,essv5513511,essv5663133,essv6024297,essv6070651,essv5627126,essv5956916,essv5405619,essv5599961,essv5573327,essv5455746,essv6109622,essv5510919,essv5964103,essv5440880,essv6234478,essv6003015,essv5851731,essv5544517,essv5619379,essv5601699,essv5929512,essv5958889 M 1151 0 244 "" HG00098,HG00103,HG00111,HG00115,HG00116,HG00139,HG00141,HG00145,HG00154,HG00159,HG00176,HG00189,HG00239,HG00249,HG00250,HG00252,HG00268,HG00278,HG00308,HG00310,HG00313,HG00318,HG00324,HG00326,HG00346,HG00353,HG00357,HG00361,HG00368,HG00372,HG00375,HG00419,HG00422,HG00437,HG00442,HG00463,HG00464,HG00478,HG00512,HG00524,HG00551,HG00581,HG00608,HG00637,HG00641,HG00656,HG00683,HG00690,HG00699,HG00732,HG00734,HG00736,HG01051,HG01052,HG01069,HG01082,HG01107,HG01124,HG01134,HG01170,HG01174,HG01177,HG01190,HG01204,HG01251,HG01357,HG01374,HG01377,HG01383,HG01384,HG01455,HG01456,HG01491,HG01522,HG01551,NA07056,NA07346,NA07347,NA07357,NA11920,NA11933,NA11994,NA12045,NA12058,NA12154,NA12155,NA12273,NA12749,NA12763,NA12775,NA12827,NA12829,NA12843,NA18486,NA18489,NA18499,NA18505,NA18510,NA18517,NA18519,NA18523,NA18534,NA18542,NA18543,NA18546,NA18548,NA18564,NA18593,NA18596,NA18602,NA18612,NA18631,NA18632,NA18853,NA18856,NA18867,NA18874,NA18908,NA18916,NA18917,NA18923,NA18924,NA18933,NA18953,NA19058,NA19085,NA19114,NA19116,NA19129,NA19172,NA19189,NA19197,NA19235,NA19236,NA19247,NA19257,NA19312,NA19313,NA19315,NA19319,NA19327,NA19331,NA19332,NA19346,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19375,NA19376,NA19377,NA19380,NA19381,NA19382,NA19383,NA19384,NA19390,NA19391,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19401,NA19403,NA19404,NA19428,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19440,NA19443,NA19448,NA19449,NA19451,NA19453,NA19455,NA19457,NA19461,NA19466,NA19467,NA19472,NA19661,NA19663,NA19664,NA19670,NA19684,NA19703,NA19704,NA19711,NA19712,NA19717,NA19720,NA19759,NA19761,NA19770,NA19788,NA19818,NA19819,NA19834,NA19835,NA19900,NA19901,NA19908,NA19916,NA19920,NA19985,NA20127,NA20276,NA20281,NA20287,NA20317,NA20340,NA20342,NA20344,NA20346,NA20348,NA20356,NA20505,NA20513,NA20516,NA20517,NA20536,NA20581,NA20586,NA20761,NA20766,NA20771,NA20783,NA20786,NA20790,NA20796,NA20797,NA20804,NA20805,NA20813 nsv954749 1 10987458 10987642 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000505 M 1 0 1 "" BILGI_BIOE esv3450829 1 10991308 10993906 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691745 M 185 1 0 "" NA12878 dgv13e199 1 10994505 10996014 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2665986,esv2657332 M 1151 0 7 "" HG00537,HG00596,NA19350,NA19375,NA19383,NA19776,NA20340 esv2743730 1 10994579 10995704 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6910035,essv6921710,essv6804397,essv6800821,essv6902525,essv6807367 M 96 0 6 "" SSM002,SSM013,SSM015,SSM018,SSM074,SSM075 esv2592186 1 10999647 11003233 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5335168 M 1 0 1 "" NA18507 nsv545407 1 11000018 11377969 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709928 M 17421 1 0 "" esv2662761 1 11000057 11002249 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6432554,essv6240552,essv6561507,essv5764472,essv6566613,essv5829346,essv6302129,essv5643423,essv6579638,essv5750123,essv6467649,essv5532380,essv6356685,essv5716359,essv6458991,essv6183321,essv6441657,essv5791211,essv6481119,essv6058296,essv6353285,essv6060257,essv6345451,essv6263697,essv6586106,essv6195875,essv6500641,essv5419469,essv6380777,essv5486702,essv5531541,essv5483712,essv6003595,essv5458820,essv5602019,essv5497175,essv6086288,essv5668688,essv5472909,essv6028616,essv5625352,essv6143553,essv5662489,essv5603320,essv6220301,essv5904274,essv5547308 M 1151 0 47 "" HG00638,HG00640,HG01167,NA18489,NA18499,NA18510,NA18603,NA19248,NA19312,NA19346,NA19347,NA19350,NA19355,NA19359,NA19371,NA19375,NA19376,NA19380,NA19382,NA19383,NA19390,NA19396,NA19397,NA19401,NA19403,NA19429,NA19434,NA19437,NA19443,NA19444,NA19445,NA19456,NA19463,NA19466,NA19467,NA19473,NA19700,NA19703,NA19704,NA19711,NA19712,NA19834,NA19835,NA19909,NA19916,NA19982,NA20346 esv23739 1 11000110 11001850 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14228 M 40 0 1 "" NA19190 nsv945768 1 11022157 11024068 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754909,nssv1751921,nssv1754904,nssv1754971,nssv1754910,nssv1754959,nssv1754916,nssv1754931,nssv1754920,nssv1754927,nssv1754907,nssv1754932,nssv1751911,nssv1754957,nssv1754919,nssv1754938,nssv1754911,nssv1754943,nssv1751908,nssv1754942,nssv1754912,nssv1754933,nssv1754921,nssv1754954,nssv1754915,nssv1754949,nssv1754917,nssv1754963,nssv1754980,nssv1754964,nssv1754982,nssv1751913,nssv1754981,nssv1751920,nssv1754983,nssv1754965,nssv1754905,nssv1754930,nssv1754914,nssv1754924,nssv1751905,nssv1754953,nssv1754906,nssv1754967,nssv1751906,nssv1754974,nssv1754913,nssv1754961,nssv1754918,nssv1754977,nssv1754908,nssv1754951,nssv1751910,nssv1754947,nssv1754922,nssv1754955,nssv1754929,nssv1754958,nssv1751914,nssv1754976,nssv1754948,nssv1751916,nssv1754946,nssv1754979,nssv1754968,nssv1754934,nssv1751909,nssv1754973,nssv1751915,nssv1754903,nssv1754978,nssv1754960,nssv1754939,nssv1754923,nssv1754956,nssv1751917,nssv1754926,nssv1754928,nssv1754972,nssv1751912,nssv1754966,nssv1754970,nssv1754925,nssv1754962,nssv1754945,nssv1754937,nssv1754952,nssv1754936,nssv1754969,nssv1754940,nssv1754975,nssv1754944,nssv1754950,nssv1754935,nssv1754941,nssv1751922,nssv1751919 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv25881 1 11037505 11045994 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv21307,esv13377 M 40 2 1 "" NA06985,NA12044,NA19257 esv2660954 1 11037555 11046258 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5962966 M 1151 0 1 "" NA19257 nsv953456 1 11038744 11060143 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001767 M 1 0 1 "" BILGI_BIOE nsv545408 1 11039373 11042087 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709929 M 17421 1 0 "" dgv106n54 1 11039776 11041925 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545410,nsv545409 M 17421 0 2 "" nsv545411 1 11040115 11041925 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709932 M 17421 1 0 "" esv2743741 1 11041130 11041390 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6668940 M 96 0 1 "" SSM031 nsv956625 1 11041735 11041974 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000475 M 1 0 1 "" BILGI_BIOE nsv474577 1 11058300 11058300 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012643 M 9 1 0 "" NA18956 nsv955233 1 11099444 11101843 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001778 M 1 0 1 "" BILGI_BIOE esv3303581 1 11152328 11152329 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7741490,essv7743300,essv7754450 M 185 3 0 "" NA18871,NA18916,NA19005 esv3427172 1 11152347 11152463 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898626,essv8898624,essv8898623 M 185 3 0 "" NA18871,NA18916,NA19005 esv2658000 1 11170208 11172276 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6345116,essv5944809,essv5587519 M 1151 0 3 "" HG01384,NA18868,NA19316 nsv945769 1 11232137 11233792 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1751928,nssv1752905,nssv1752935,nssv1751949,nssv1751926,nssv1752880,nssv1752941,nssv1751923,nssv1752933,nssv1752904,nssv1751933,nssv1752888,nssv1751936,nssv1752952,nssv1751939,nssv1752924,nssv1752934,nssv1752946,nssv1751931,nssv1752885,nssv1752943,nssv1752951,nssv1751937,nssv1751946,nssv1751925,nssv1752917,nssv1751943,nssv1752948,nssv1752939,nssv1752899,nssv1752936,nssv1752889,nssv1751941,nssv1752929,nssv1751935,nssv1752945,nssv1751942,nssv1752949,nssv1751924,nssv1752896,nssv1751934,nssv1752879,nssv1752938,nssv1752947,nssv1752937,nssv1752954,nssv1751944,nssv1752925,nssv1751938,nssv1752930,nssv1751930,nssv1752926,nssv1751927,nssv1752906,nssv1751932,nssv1752919,nssv1752922,nssv1752902,nssv1752910,nssv1751948,nssv1752903,nssv1752914,nssv1752923,nssv1752891,nssv1752878,nssv1752944,nssv1752890,nssv1752893,nssv1752897,nssv1752908,nssv1752918,nssv1752916,nssv1752877,nssv1752900,nssv1752883,nssv1752921,nssv1752895,nssv1752894,nssv1752901,nssv1752927,nssv1752932,nssv1752913,nssv1752915,nssv1752928,nssv1752911,nssv1752907,nssv1752881,nssv1752940,nssv1751950,nssv1752950,nssv1752912,nssv1752882,nssv1752876,nssv1751947,nssv1751945,nssv1752892,nssv1752884 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv474152 1 11249266 11249266 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019622 M 9 1 0 "" NA18507 nsv516050 1 11312581 11338308 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv701963,nssv683456,nssv665889,nssv700989 M 2026 0 4 "" nsv832536 1 11328720 11502284 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442752 M 95 0 1 "" esv2672657 1 11352715 11356637 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5407469,essv6274262,essv5625718 M 1151 0 3 "" HG00151,HG00620,NA19082 esv3331891 1 11363238 11363248 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863674 M 185 1 0 "" NA12005 esv3329848 1 11373456 11374474 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652037 M 185 1 0 "" NA19240 esv2668404 1 11407101 11413358 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6219838,essv5984928 M 1151 0 2 "" HG01461,NA19657 nsv465394 1 11433775 11460596 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541193 M 1557 0 1 "" 1780854097_A nsv545412 1 11433775 11460596 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173671 M 17421 0 1 "" 1780854097_A nsv528438 1 11436937 11441374 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705033 M 2026 0 1 "" nsv2632 1 11477020 11507795 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv298 M 9 1 0 "" NA19240 esv2657750 1 11481384 11483143 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6269148 M 1151 0 1 "" NA20586 nsv832647 1 11502290 11609539 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442763 M 95 0 1 "" nsv465505 1 11502433 11541062 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541299 M 1557 0 1 "" HGDP00857 nsv545413 1 11502433 11541062 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173672 M 17421 0 1 "" HGDP00857 dgv107n54 1 11502433 11566801 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545415,nsv545414 M 17421 0 3 "" HGDP00787 nsv465727 1 11502433 11566801 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541477 M 1557 0 1 "" HGDP00787 nsv470692 1 11515203 11562922 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547697 M 443 1 0 "" HGDP00599 nsv521736 1 11517774 11535274 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694500 M 2026 0 1 "" nsv955244 1 11518444 11537643 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001789 M 1 0 1 "" BILGI_BIOE esv2628262 1 11522346 11523112 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5205183 M 1 1 0 "" NA18507 esv3380219 1 11522391 11522943 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808884 M 185 1 0 "" NA12878 esv26916 1 11522495 11522965 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13120 M 40 0 1 "" NA07045 esv3337006 1 11539767 11539786 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8678328 M 185 1 0 "" NA12878 esv3309193 1 11539776 11539777 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839434 M 185 1 0 "" NA12878 nsv520251 1 11554211 11566801 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697308 M 2026 0 1 "" nsv545416 1 11620226 11676353 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709935 M 17421 0 1 "" esv7758 1 11622605 11623254 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30199 M 1 0 0 "" esv2570682 1 11622635 11624334 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5218562 M 1 0 1 "" NA18507 esv2017403 1 11622657 11623312 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4788047 M 1 0 1 "" NA18507 esv3208 1 11622779 11623255 CNV loss Wang_et_al_2008 18987735 Sequencing essv25649 M 1 0 1 "" YH esv2743752 1 11622807 11623116 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821175,essv6961544,essv6859181,essv6780862,essv6972331,essv6863950,essv6889000,essv6843776,essv6696985,essv6718160,essv6954734,essv6707260,essv6898607,essv6824974,essv6747769,essv6892314,essv6816575,essv6853229,essv6807368,essv6946486,essv6699592 M 96 0 21 "" SSM011,SSM024,SSM026,SSM027,SSM029,SSM038,SSM039,SSM041,SSM044,SSM056,SSM068,SSM075,SSM078,SSM079,SSM080,SSM087,SSM088,SSM089,SSM097,SSM098,SSM100 esv2666437 1 11622836 11623132 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6477760,essv5997457,essv6549109,essv5922270,essv6552870,essv6134938,essv6458255,essv6271479,essv6524748,essv6021587,essv6485043,essv5736091,essv6474848,essv6138203,essv6531389,essv6258583,essv6553862,essv6316134,essv6595440,essv5641635,essv6527102,essv6313623,essv6552516,essv5914186,essv6534292,essv6194176,essv6495125,essv5789809,essv6593293,essv5685573,essv6508975,essv6264894,essv6574251,essv5840970,essv6552901,essv5720517,essv6467818,essv6126389,essv6569738,essv5775881,essv6576113,essv5618284,essv6497022,essv6369567,essv6589368,essv5677467,essv6589373,essv6422703,essv6551177,essv6222503,essv6453746,essv5787078,essv6589387,essv6030563,essv6450709,essv5806416,essv6594399,essv5702425,essv6556822,essv5754199,essv6468675,essv5655212,essv6456261,essv5519629,essv6473176,essv6299803,essv6558742,essv5945198,essv6540014,essv6273781,essv6457914,essv5829923,essv6505671,essv6104142,essv6509873,essv6406132,essv6564760,essv5704285,essv6482091,essv5786411,essv6536967,essv5563366,essv6489604,essv5738254,essv6520760,essv5669123,essv6513811,essv6410768,essv6513087,essv5686746,essv6503435,essv5745998,essv6465350,essv5744098,essv6467000,essv5440793,essv6591262,essv6370000,essv6566294,essv5741317,essv6484816,essv5428741,essv6561298,essv6200209,essv6580968,essv5841022,essv6533518,essv6069127,essv6538567,essv5842121,essv6514480,essv6269978,essv6486136,essv5819464,essv6549247,essv6384433,essv6547713,essv6172356,essv6478228,essv6381031,essv6528943,essv5775396,essv6540515,essv6320865,essv6595206,essv6135668,essv6597986,essv6094004,essv6518434,essv6356526,essv6469534,essv5432100,essv6481083,essv5761758,essv6573031,essv5808821,essv6550906,essv6084532,essv6544955,essv6059921,essv6542212,essv6274056,essv6553770,essv6430887,essv6492389,essv6321500,essv6533999,essv5724992,essv6516429,essv5460733,essv6532577,essv5608374,essv6598135,essv5698681,essv6548578,essv5712471,essv6448619,essv5983438,essv6391020,essv5829969,essv6363717,essv5444378,essv5697267,essv5452322,essv5716235,essv5780910,essv5809919,essv6020444,essv5562840,essv6300361,essv5675546,essv6421586,essv6220406,essv5699737,essv5433723,essv6055418,essv5832832,essv5608184,essv5772619,essv5931786,essv6176660,essv5859984,essv5641389,essv5553257,essv5796445,essv5637434,essv6120509,essv6398118,essv5726038,essv6044479,essv6097913,essv5806835,essv6128141,essv6037551,essv5717557,essv5785852,essv6374163,essv5826486,essv6122221,essv5814744,essv6175490,essv5893299,essv5711549,essv5437540,essv5712658,essv6227114,essv5708469,essv5751966,essv6147026,essv5992410,essv5746460,essv6210235,essv5812739,essv5452506,essv6344223,essv5964035,essv5683620,essv5813371,essv6230453,essv5898958,essv6265236,essv6140282,essv6108631,essv5684094,essv5702758,essv6286902,essv5634379,essv6087619,essv5737455,essv6288776,essv5757671,essv6162853,essv5548042,essv6289109,essv5690804,essv6363642,essv5700030,essv5984541,essv5717645,essv6408719,essv5817671,essv5831614,essv5821652,essv5744650,essv6332951,essv5507007,essv5514123,essv5661126,essv5759707,essv6270993,essv5952587,essv5722668,essv5493210,essv5792649,essv6364857,essv6168833,essv5438767,essv6027594,essv5770088,essv5773476,essv5475868,essv5695351,essv6412404,essv6380194,essv5462858,essv6108329,essv5615454,essv5812743,essv5911609,essv5479222,essv5558781,essv5830718,essv5832207,essv6065167,essv5607324,essv5809273,essv6395990,essv5988683,essv6123568,essv5474424,essv6392714,essv6393200,essv6209742,essv6432073,essv6418149,essv5720823,essv5715074,essv5498125,essv6406016,essv5875279,essv6033065,essv5826844,essv6089478,essv5828248,essv6331953,essv5511046,essv5828990,essv6249129,essv6106601,essv6225523,essv5970170,essv5618860,essv5710568,essv5790492,essv5431043,essv5686442,essv6402099,essv6281475,essv6179787,essv5801917,essv6034457,essv6171737,essv6166147,essv5803047,essv5738166,essv6113754,essv5909097,essv6207467,essv6361727,essv6098539,essv6440258,essv6202739,essv6442648,essv5880436,essv5402556,essv6073118,essv6075318,essv5425436,essv5548288,essv5944276,essv5867321,essv6326527,essv6115765,essv5972969,essv6370984,essv6435480,essv5982179,essv5909070,essv5821515,essv5655328,essv6034102,essv6201458,essv6329357,essv5669581,essv5424169,essv6259703,essv5852049,essv6303125,essv5402677,essv5436923,essv6126289,essv5901566,essv6137682,essv5967078,essv6151630,essv5474613,essv5446954,essv6099956,essv5558805,essv5867787,essv6014560,essv5857681,essv6141294,essv5518174,essv6180765,essv6116320,essv6141116,essv5473688,essv5649484,essv6046909,essv5503921,essv6440826,essv5998087,essv5402436,essv6317680,essv6276195,essv6264799,essv6180585,essv5640580,essv5496612,essv6050319,essv6281187,essv6269794,essv6264301,essv6152051,essv5850582,essv5403003,essv5500632,essv6359553,essv5953568,essv5869666,essv6293684,essv6434220,essv5672408,essv6054490,essv5857315,essv5567531,essv6161776,essv5852880,essv5404053,essv6408943,essv5397928,essv5839832,essv6049398,essv5841321,essv5602336,essv5858473,essv6285733,essv6239560,essv6440097,essv5477271,essv5578575,essv6154775,essv5623830,essv5560127,essv5485265,essv5937635,essv5414441,essv5967652,essv6346521,essv5452850,essv5546456,essv5518732,essv5896862,essv6070056,essv6307393,essv5526024,essv6140244,essv6279042,essv5856084,essv6400393,essv5835627,essv6035531,essv6007125,essv5653532,essv6273913,essv5409914,essv6250208,essv6419779,essv5462411,essv5849942,essv5459968,essv5894807,essv6125574,essv5442867,essv6010254,essv5476617,essv6414119,essv5482552,essv6372554,essv5479209,essv6380675,essv6131404,essv6238225,essv6263345,essv5412743,essv6334420,essv6063177,essv5863584,essv5893840,essv5938441,essv6099515,essv6135443,essv5962682,essv5592105,essv6243975,essv5545185,essv6047461,essv6203243,essv5978567,essv5415013,essv6246278,essv5554387,essv5553381,essv6412682,essv5903925,essv6219472,essv6120768,essv6000530,essv6331013,essv5413185,essv5454923,essv6418416,essv6096230,essv5935816,essv5417790,essv5458974,essv6029991,essv6112283,essv5624347,essv6017111,essv6074854,essv5413219,essv5459106,essv5640027,essv5865704,essv5519435,essv6204806,essv5648244,essv5864520,essv5885583,essv6110671,essv5630219,essv6074857,essv5454821,essv5836145,essv5979364,essv5521071,essv6199540,essv5467969,essv6233114,essv6117695,essv6039488,essv6341473,essv5972844,essv6353139,essv5860658,essv5598969,essv5893427,essv5965760,essv6110908,essv6062060,essv5499440,essv6372240,essv6216608,essv5945843,essv5418566,essv5868148,essv6327317,essv6417107,essv6367383,essv5416725,essv6043812,essv6021392,essv5868909,essv6401729,essv5890392,essv5576240,essv5427728,essv6421410,essv6052328,essv6263424,essv6036623,essv6188575,essv6050102,essv5475863,essv6186395,essv5647991,essv5416869,essv6353246,essv5876618,essv6189940,essv6030100,essv5535274,essv5998575,essv5413204,essv6022514,essv6331288,essv5913244,essv5771946,essv5417311,essv5849291,essv6040668,essv5948685,essv5920491,essv5633581,essv6083360,essv6029891,essv6330776,essv6190557,essv5836902,essv5863747,essv6169902,essv5482260,essv5886848,essv5570033,essv6122106,essv5660381,essv5489416,essv5839564,essv5406100,essv6417539,essv5479282,essv5962321,essv6249441,essv5461171,essv6128976,essv5763482,essv6037011,essv5629817,essv5444787,essv5563794,essv6134335,essv6233682,essv5668321,essv6270635,essv6014220,essv5956894,essv5600231,essv5923301,essv6366054,essv5453023,essv5479145,essv6333758,essv6065078,essv5975165,essv6100086,essv6129376,essv6283412,essv5421515,essv5522094,essv5906040,essv5479690,essv5442130,essv6419689,essv5587714,essv6424899,essv6168685,essv5427571,essv6002753,essv5638079,essv6182623,essv5546216,essv5672467,essv6412112,essv5460156,essv5403864,essv5861863,essv5610452,essv5571880,essv5980228,essv6140973,essv6081560,essv5572618,essv5494636,essv5446220,essv5442575,essv6054982,essv5661240,essv5587280,essv5591757,essv5411483,essv6265147,essv6343272,essv5458329,essv6367458,essv5839912,essv6014844,essv6025435,essv6106292,essv6208725,essv5952596,essv6215098,essv6053356,essv5906980,essv6133390,essv6243536,essv6129411,essv5687759,essv5483785,essv6319235,essv5980735,essv5649613 M 1151 0 663 "" HG00096,HG00098,HG00100,HG00106,HG00108,HG00111,HG00114,HG00115,HG00117,HG00118,HG00119,HG00120,HG00122,HG00123,HG00125,HG00126,HG00127,HG00131,HG00133,HG00136,HG00137,HG00138,HG00139,HG00140,HG00141,HG00142,HG00143,HG00145,HG00147,HG00148,HG00150,HG00151,HG00152,HG00154,HG00155,HG00156,HG00157,HG00158,HG00159,HG00160,HG00171,HG00173,HG00174,HG00176,HG00177,HG00178,HG00179,HG00180,HG00181,HG00182,HG00183,HG00185,HG00186,HG00187,HG00188,HG00189,HG00190,HG00231,HG00232,HG00233,HG00236,HG00237,HG00239,HG00243,HG00244,HG00245,HG00246,HG00247,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00258,HG00259,HG00260,HG00262,HG00263,HG00264,HG00265,HG00266,HG00267,HG00268,HG00269,HG00270,HG00271,HG00272,HG00273,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00309,HG00310,HG00311,HG00312,HG00313,HG00315,HG00318,HG00319,HG00320,HG00321,HG00324,HG00325,HG00326,HG00327,HG00328,HG00329,HG00330,HG00331,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00345,HG00346,HG00353,HG00357,HG00361,HG00366,HG00367,HG00368,HG00369,HG00372,HG00373,HG00375,HG00377,HG00404,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00443,HG00448,HG00449,HG00464,HG00472,HG00473,HG00476,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00537,HG00551,HG00553,HG00554,HG00557,HG00559,HG00565,HG00566,HG00580,HG00581,HG00583,HG00584,HG00589,HG00607,HG00608,HG00611,HG00614,HG00620,HG00625,HG00628,HG00634,HG00635,HG00637,HG00638,HG00640,HG00641,HG00650,HG00654,HG00656,HG00657,HG00662,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00699,HG00704,HG00705,HG00707,HG00708,HG00731,HG00732,HG00734,HG00736,HG00737,HG00739,HG00740,HG01047,HG01048,HG01051,HG01052,HG01055,HG01060,HG01061,HG01066,HG01067,HG01069,HG01070,HG01072,HG01073,HG01075,HG01080,HG01082,HG01095,HG01097,HG01098,HG01101,HG01102,HG01124,HG01125,HG01133,HG01136,HG01137,HG01167,HG01168,HG01170,HG01171,HG01173,HG01174,HG01176,HG01177,HG01183,HG01187,HG01188,HG01190,HG01191,HG01197,HG01198,HG01204,HG01251,HG01334,HG01342,HG01350,HG01351,HG01354,HG01359,HG01365,HG01366,HG01374,HG01375,HG01377,HG01378,HG01383,HG01389,HG01390,HG01437,HG01440,HG01441,HG01455,HG01456,HG01461,HG01462,HG01488,HG01489,HG01492,HG01497,HG01515,HG01516,HG01518,HG01519,HG01521,HG01522,NA06984,NA06985,NA06986,NA06989,NA07000,NA07037,NA07048,NA07051,NA07056,NA07346,NA07347,NA07357,NA10847,NA10851,NA11829,NA11830,NA11831,NA11832,NA11843,NA11881,NA11892,NA11893,NA11894,NA11919,NA11920,NA11930,NA11931,NA11932,NA11933,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12006,NA12043,NA12044,NA12045,NA12046,NA12058,NA12144,NA12154,NA12155,NA12156,NA12234,NA12249,NA12272,NA12273,NA12275,NA12282,NA12283,NA12286,NA12287,NA12340,NA12341,NA12342,NA12347,NA12383,NA12399,NA12400,NA12413,NA12489,NA12546,NA12716,NA12717,NA12718,NA12748,NA12749,NA12750,NA12751,NA12761,NA12775,NA12776,NA12777,NA12778,NA12813,NA12827,NA12828,NA12829,NA12830,NA12842,NA12843,NA12878,NA12889,NA12890,NA12891,NA12892,NA18486,NA18487,NA18488,NA18489,NA18498,NA18499,NA18501,NA18505,NA18507,NA18508,NA18511,NA18517,NA18519,NA18520,NA18522,NA18523,NA18526,NA18530,NA18532,NA18533,NA18537,NA18542,NA18545,NA18546,NA18547,NA18548,NA18549,NA18552,NA18555,NA18559,NA18561,NA18562,NA18563,NA18564,NA18565,NA18566,NA18567,NA18571,NA18573,NA18574,NA18576,NA18577,NA18579,NA18582,NA18596,NA18599,NA18602,NA18605,NA18608,NA18610,NA18611,NA18612,NA18620,NA18622,NA18623,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18638,NA18856,NA18858,NA18861,NA18870,NA18873,NA18874,NA18908,NA18909,NA18916,NA18941,NA18942,NA18944,NA18947,NA18950,NA18952,NA18956,NA18960,NA18963,NA18967,NA18983,NA18984,NA18986,NA18988,NA18990,NA18991,NA18999,NA19007,NA19054,NA19058,NA19059,NA19065,NA19078,NA19079,NA19087,NA19088,NA19092,NA19102,NA19107,NA19114,NA19119,NA19198,NA19223,NA19225,NA19235,NA19238,NA19240,NA19257,NA19311,NA19316,NA19319,NA19327,NA19328,NA19332,NA19346,NA19347,NA19359,NA19360,NA19371,NA19372,NA19373,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19384,NA19390,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19430,NA19431,NA19436,NA19438,NA19443,NA19445,NA19453,NA19463,NA19472,NA19625,NA19648,NA19651,NA19652,NA19654,NA19655,NA19657,NA19658,NA19661,NA19663,NA19675,NA19676,NA19679,NA19681,NA19682,NA19684,NA19700,NA19707,NA19713,NA19716,NA19717,NA19719,NA19720,NA19723,NA19725,NA19726,NA19728,NA19729,NA19732,NA19747,NA19749,NA19750,NA19755,NA19759,NA19761,NA19762,NA19770,NA19771,NA19774,NA19776,NA19779,NA19780,NA19782,NA19783,NA19785,NA19786,NA19788,NA19789,NA19818,NA19834,NA19900,NA19904,NA19908,NA19914,NA19920,NA19921,NA20126,NA20278,NA20299,NA20332,NA20336,NA20346,NA20356,NA20502,NA20503,NA20504,NA20506,NA20507,NA20513,NA20514,NA20515,NA20516,NA20517,NA20518,NA20522,NA20524,NA20525,NA20527,NA20528,NA20529,NA20530,NA20531,NA20533,NA20534,NA20536,NA20537,NA20538,NA20539,NA20540,NA20541,NA20542,NA20543,NA20544,NA20581,NA20582,NA20585,NA20586,NA20588,NA20752,NA20755,NA20756,NA20757,NA20758,NA20759,NA20760,NA20761,NA20765,NA20766,NA20768,NA20769,NA20770,NA20772,NA20773,NA20774,NA20775,NA20778,NA20783,NA20785,NA20786,NA20787,NA20795,NA20796,NA20799,NA20800,NA20801,NA20802,NA20803,NA20804,NA20805,NA20806,NA20807,NA20808,NA20809,NA20811,NA20812,NA20813,NA20814,NA20816,NA20826,NA20828 esv2853458 1 11622836 11623132 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7123025 M 1 0 1 "" HuRef nsv955438 1 11622851 11623108 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000432 M 1 0 1 "" BILGI_BIOE nsv832758 1 11637026 11777087 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442774 M 95 0 1 "" nsv515826 1 11650504 11653506 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv660113,nssv682277,nssv685412,nssv664907,nssv673329,nssv682473,nssv693798,nssv679392,nssv683681,nssv655395,nssv681520,nssv674188,nssv666865 M 2026 0 13 "" nsv545417 1 11650504 11661559 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709936 M 17421 0 1 "" nsv521468 1 11653506 11657243 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694449 M 2026 0 1 "" nsv508880 1 11721383 11771263 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619769 M 4 1 0 "" NA10860 nsv545418 1 11743229 11749469 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709937 M 17421 0 1 "" nsv545419 1 11747558 11751216 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709938 M 17421 1 0 "" nsv545420 1 11747913 11751226 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709939 M 17421 0 1 "" nsv545421 1 11748649 11750617 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709940 M 17421 0 1 "" dgv108n54 1 11749358 11751216 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545423,nsv545422 M 17421 0 2 "" nsv518652 1 11797654 11802721 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696101 M 2026 0 1 "" esv2280942 1 11829508 11829829 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4641147 M 1 0 1 "" NA18507 nsv527521 1 11840768 11849457 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703975 M 2026 0 1 "" nsv517385 1 11868773 11868838 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv653897,nssv673526,nssv681416,nssv652751,nssv690321,nssv669294,nssv656721 M 2026 0 7 "" esv2743763 1 11928582 11933355 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6722000,essv6917415,essv6961545,essv6733477,essv6892315,essv6967920,essv6946487,essv6847005 M 96 0 8 "" SSM017,SSM024,SSM027,SSM028,SSM045,SSM049,SSM086,SSM098 esv2670693 1 11928592 11933350 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5802120,essv5743262,essv5557663,essv5416173,essv6591077,essv6158937,essv5708107,essv5550755,essv5492028,essv6450182,essv6013996,essv6390169,essv5867042,essv6354380,essv6262121,essv5841944,essv6321813 M 1151 0 17 "" HG00180,HG00320,HG00329,HG00419,HG00560,HG00590,HG00662,HG00683,NA18559,NA18582,NA18593,NA18620,NA18636,NA18948,NA18990,NA19076,NA19082 nsv828475 1 11929565 11933221 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423944 M 31 0 1 "" NA18582 esv2674148 1 11929788 11935585 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6229766,essv5970262,essv6255764,essv6134973,essv6287791,essv5726229,essv5652110,essv5975255,essv6300775,essv5548935,essv6062700,essv5579580,essv5396538,essv6516434 M 1151 0 14 "" HG00180,HG00181,HG00274,HG00277,HG00284,HG00309,HG00320,HG00326,HG00329,HG00339,HG00342,HG00343,HG00344,HG00346 esv22435 1 11929811 11933427 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16673 M 40 0 1 "" NA12414 dgv109n54 1 11930710 11933069 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545426,nsv545425,nsv545424 M 17421 0 4 "" esv2743774 1 11936633 11937081 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6801612,essv6954735 M 96 0 2 "" SSM026,SSM073 nsv545427 1 11960355 11966298 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709947 M 17421 0 1 "" nsv955252 1 11963044 11966243 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001800 M 1 0 1 "" BILGI_BIOE dgv110n54 1 11966298 11971425 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545429,nsv545428 M 17421 0 2 "" nsv545430 1 11970390 11971425 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709950 M 17421 1 0 "" dgv111n54 1 11970702 11971425 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545432,nsv545431 M 17421 0 3 "" esv27905 1 11970714 11971452 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17941 M 40 1 0 "" NA12156 nsv545433 1 11970804 11971425 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709958,nssv709954,nssv709955,nssv709957,nssv709959,nssv709960,nssv709961,nssv709956 M 17421 8 0 "" nsv545434 1 11970856 11971425 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv709993,nssv709968,nssv709984,nssv709996,nssv709966,nssv709986,nssv709975,nssv710000,nssv710011,nssv709971,nssv709990,nssv709995,nssv709965,nssv710008,nssv709976,nssv709974,nssv709981,nssv709964,nssv709998,nssv709962,nssv709991,nssv709978,nssv709985,nssv709963,nssv710001,nssv710007,nssv709977,nssv709982,nssv709987,nssv710002,nssv710005,nssv710006,nssv709997,nssv710009,nssv709992,nssv709989,nssv710010,nssv709994,nssv709970,nssv709967,nssv710004,nssv709969,nssv709988,nssv709972,nssv710003,nssv709979,nssv709983,nssv709973,nssv709999,nssv709980 M 17421 46 4 "" nsv545435 1 11970856 11971973 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710012,nssv710013,nssv710014 M 17421 3 0 "" nsv470693 1 11990577 12055634 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547698 M 443 0 1 "" HGDP00556 nsv945771 1 11992467 11994195 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752989,nssv1752963,nssv1753041,nssv1752962,nssv1753053,nssv1752969,nssv1753024,nssv1752974,nssv1752979,nssv1752971,nssv1753048,nssv1752972,nssv1752988,nssv1752975,nssv1753005,nssv1753043,nssv1753001,nssv1752960,nssv1753026,nssv1753036,nssv1752986,nssv1752970,nssv1752996,nssv1753034,nssv1753044,nssv1752961,nssv1752991,nssv1753042,nssv1753046,nssv1752973,nssv1752997,nssv1752965,nssv1752987,nssv1752968,nssv1752992,nssv1753035,nssv1753025,nssv1753037,nssv1752955,nssv1752957,nssv1752980,nssv1752959,nssv1753014,nssv1752958,nssv1752982,nssv1752967,nssv1752976,nssv1753040,nssv1752993,nssv1753039,nssv1753029,nssv1752966,nssv1752990,nssv1752956,nssv1753031,nssv1753038,nssv1753007,nssv1753009,nssv1752983,nssv1753032,nssv1753049,nssv1753023,nssv1753022,nssv1752985,nssv1752977,nssv1753030,nssv1753017,nssv1753019,nssv1753013,nssv1753033,nssv1753021,nssv1753051,nssv1753052,nssv1753010,nssv1753028,nssv1753027,nssv1753016,nssv1752999,nssv1752981,nssv1752994,nssv1753003,nssv1753018,nssv1753006,nssv1753008,nssv1752998,nssv1752978,nssv1752984,nssv1753045,nssv1753000,nssv1753004,nssv1753020,nssv1753011,nssv1753012,nssv1753015,nssv1753050,nssv1753002,nssv1753047 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2743785 1 11992930 11993329 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6843879,essv6773435,essv6722001,essv6917416,essv6950174,essv6961546,essv6839964,essv6813163,essv6747770,essv6733478,essv6946488,essv6847006 M 96 0 12 "" SSM004,SSM017,SSM024,SSM027,SSM045,SSM049,SSM056,SSM066,SSM077,SSM084,SSM085,SSM086 esv2672640 1 11993045 11993360 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5770172,essv5402476,essv5701547,essv6513676,essv6375486,essv5634866,essv5940314,essv5711658,essv5411662,essv6422375,essv5881455,essv6176209,essv5633702,essv5482363,essv6366586,essv5457787,essv6269652,essv6410934 M 1151 0 18 "" HG00419,HG00443,HG00589,HG00590,HG00662,HG00683,HG00690,NA18530,NA18534,NA18536,NA18592,NA18593,NA18597,NA18635,NA18636,NA18948,NA18952,NA18990 esv3361336 1 12006200 12006251 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898629,essv8898628,essv8898627 M 185 3 0 "" NA18592,NA18593,NA18948 esv3304719 1 12006214 12006215 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7759312,essv7750861,essv7757876 M 185 3 0 "" NA18592,NA18593,NA18948 nsv469830 1 12039669 12199858 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1674860 M 265 0 1 "" esv6101 1 12062408 12062953 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28542 M 1 0 0 "" nsv466060 1 12069994 12081404 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541698 M 1557 0 1 "" 1780862021_A nsv545436 1 12069994 12081404 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173674 M 17421 0 1 "" 1780862021_A esv2662914 1 12071576 12074023 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5536735 M 1151 0 1 "" HG00282 nsv945772 1 12079536 12081203 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753071,nssv1753106,nssv1753061,nssv1753142,nssv1753067,nssv1753112,nssv1753138,nssv1753097,nssv1753058,nssv1753082,nssv1753070,nssv1753117,nssv1753133,nssv1753076,nssv1753073,nssv1753084,nssv1753060,nssv1753104,nssv1753064,nssv1753095,nssv1753134,nssv1753113,nssv1753059,nssv1753086,nssv1753068,nssv1753118,nssv1753132,nssv1753149,nssv1753066,nssv1753100,nssv1753063,nssv1753109,nssv1753057,nssv1753110,nssv1753056,nssv1753092,nssv1753069,nssv1753145,nssv1753135,nssv1753130,nssv1753065,nssv1753150,nssv1753141,nssv1753098,nssv1753062,nssv1753119,nssv1753137,nssv1753129,nssv1753140,nssv1753124,nssv1753055,nssv1753148,nssv1753136,nssv1753103,nssv1753072,nssv1753102,nssv1753105,nssv1753088,nssv1753144,nssv1753094,nssv1753099,nssv1753131,nssv1753146,nssv1753054,nssv1753126,nssv1753080,nssv1753115,nssv1753078,nssv1753091,nssv1753120,nssv1753077,nssv1753089,nssv1753123,nssv1753127,nssv1753083,nssv1753085,nssv1753087,nssv1753139,nssv1753107,nssv1753090,nssv1753114,nssv1753151,nssv1753122,nssv1753143,nssv1753128,nssv1753111,nssv1753147,nssv1753074,nssv1753121,nssv1753125,nssv1753116,nssv1753108,nssv1753101,nssv1753075,nssv1753081,nssv1753079,nssv1753093 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv525898 1 12081404 12108466 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702102 M 2026 0 1 "" esv3350116 1 12082977 12082988 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863676 M 185 1 0 "" NA12005 esv1290308 1 12090136 12090234 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4317882 M 2 0 1 "" HuRef nsv508891 1 12097920 12235045 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619770 M 4 1 0 "" NA10860 esv2670946 1 12105838 12108879 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6516150 M 1151 0 1 "" HG00136 esv2743796 1 12117225 12118332 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6747771 M 96 0 1 "" SSM056 nsv476183 1 12121253 12121253 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013757 M 9 1 0 "" NA12878 nsv945773 1 12136131 12137441 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753165,nssv1754141,nssv1753159,nssv1754111,nssv1754158,nssv1754151,nssv1753168,nssv1754167,nssv1754156,nssv1754149,nssv1753171,nssv1754135,nssv1753160,nssv1754144,nssv1754157,nssv1754113,nssv1753157,nssv1754110,nssv1753156,nssv1753182,nssv1753166,nssv1753179,nssv1753161,nssv1754170,nssv1753164,nssv1754166,nssv1754154,nssv1753172,nssv1753158,nssv1753177,nssv1753167,nssv1754120,nssv1754160,nssv1754161,nssv1754155,nssv1754148,nssv1754162,nssv1754122,nssv1753169,nssv1754126,nssv1753154,nssv1753180,nssv1753162,nssv1754146,nssv1753163,nssv1754172,nssv1753155,nssv1753173,nssv1753153,nssv1754125,nssv1754159,nssv1754164,nssv1754163,nssv1754147,nssv1753170,nssv1754150,nssv1754123,nssv1754145,nssv1754165,nssv1754143,nssv1754119,nssv1754118,nssv1754112,nssv1754140,nssv1754169,nssv1754153,nssv1753152,nssv1754171,nssv1754117,nssv1754142,nssv1754115,nssv1754139,nssv1754134,nssv1754133,nssv1753174,nssv1754130,nssv1754138,nssv1754116,nssv1753176,nssv1754114,nssv1754127,nssv1754108,nssv1754131,nssv1753175,nssv1754168,nssv1754129,nssv1754136,nssv1754124,nssv1754109,nssv1754152,nssv1753181,nssv1753183,nssv1753178,nssv1754132,nssv1754173,nssv1754137,nssv1754128 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3439333 1 12138949 12138949 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8824952 M 185 1 0 "" NA19240 nsv820293 1 12143521 12143705 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419048 M 2 0 1 "" AK1 nsv471622 1 12155207 12371588 CNV gain+loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550343,nssv550325,nssv550319,nssv550339,nssv550318,nssv550332,nssv550323,nssv550335,nssv550326,nssv550341,nssv550338,nssv550330,nssv550329,nssv550328,nssv550321,nssv550320,nssv550340,nssv550336,nssv550327,nssv550333,nssv550324,nssv550337,nssv550342,nssv550331,nssv550334,nssv550322 M 48 1 25 "" NA10492,NA10494,NA10967,NA10969,NA10970,NA10971,NA10976,NA10979,NA11776,NA15724,NA15725,NA15726,NA15727,NA15728,NA15730,NA15732,NA15733,NA16688,NA17014,NA17015,NA17017,NA17020,NA17051,NA17052,NA17059,P86GA nsv527024 1 12164182 12207208 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703399 M 2026 0 1 "" nsv545437 1 12180767 12184201 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710015 M 17421 0 1 "" dgv112n54 1 12182702 12186118 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545438,nsv545439 M 17421 0 4 "" dgv113n54 1 12184201 12188963 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545441,nsv545440 M 17421 0 2 "" esv275384 1 12294250 12297019 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585374 M 1250 0 1 "" nsv517848 1 12313691 12582215 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv695253 M 2026 1 0 "" nsv2743 1 12332549 12377445 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7522 M 9 0 1 "" NA12156 esv2743809 1 12387266 12387837 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6735973 M 96 0 1 "" SSM050 nsv2854 1 12410639 12456053 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6975 M 9 0 1 "" NA12156 esv2667673 1 12425194 12429533 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6421919 M 1151 0 1 "" HG00232 nsv528439 1 12442371 12446904 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705034 M 2026 0 1 "" nsv817617 1 12448887 12473413 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417810 M 112 0 1 "" NA18853 nsv521737 1 12539396 12624831 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694501 M 2026 0 1 "" nsv466172 1 12565072 12610391 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541787 M 1557 0 1 "" NINDS_71 nsv545442 1 12565072 12610391 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173675 M 17421 0 1 "" NINDS_71 nsv466283 1 12565072 12624831 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541870 M 1557 1 0 "" HGDP00259 nsv545443 1 12565072 12624831 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173676 M 17421 1 0 "" HGDP00259 esv3310510 1 12565581 12565592 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843569 M 185 1 0 "" NA19240 esv3379200 1 12565582 12565592 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740934 M 185 1 0 "" NA19240 nsv955253 1 12595388 12596187 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001811 M 1 0 1 "" BILGI_BIOE nsv475178 1 12605394 12605394 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011930 M 9 1 0 "" NA19240 nsv475134 1 12605450 12605450 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019533 M 9 1 0 "" NA19240 nsv515525 1 12659200 12663173 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv663825,nssv655876,nssv687835,nssv691346 M 2026 0 4 "" nsv8657 1 12683137 12687946 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv28045,nssv12449 M 31 0 2 "" NA18853,NA19173 esv1936135 1 12683283 12686725 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4851711 M 1 0 1 "" NA18507 esv2667361 1 12683395 12686616 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6597293,essv6292295,essv5714381,essv5817963,essv5788887,essv6225797,essv6295698,essv5519525,essv5655474,essv5683600,essv6413214,essv6424701,essv5606588,essv6144014,essv6067103,essv6457931,essv5973727,essv5955844,essv6335145,essv5539803,essv6114312,essv5909270 M 1151 0 22 "" HG01191,HG01365,NA18522,NA18867,NA18874,NA19102,NA19312,NA19334,NA19346,NA19374,NA19383,NA19443,NA19444,NA19453,NA19468,NA19470,NA19474,NA19818,NA19834,NA19908,NA19920,NA19982 esv3302784 1 12686689 12692039 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7732052,essv7734122,essv7733193,essv7737228 M 185 0 0 "" NA18498,NA18507,NA18522,NA18853 nsv545444 1 12687857 12727665 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710022 M 17421 0 1 "" nsv466394 1 12714996 12854043 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv541946 M 1557 1 0 "" HGDP00153 nsv545445 1 12714996 12854043 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173677 M 17421 1 0 "" HGDP00153 esv2664000 1 12745324 12747071 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6592404,essv5800624,essv6438790,essv6145854,essv6463242,essv5405133,essv6234108,essv6305105 M 1151 0 8 "" NA18873,NA18908,NA19189,NA19350,NA19375,NA19393,NA19396,NA19397 nsv832869 1 12747525 12954384 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442785,nssv1442796 M 95 1 1 "" nsv470695 1 12760937 12854042 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547699,nssv547700,nssv547702,nssv547703 M 443 0 4 "" HGDP00694,HGDP00702,HGDP00988,HGDP01366 nsv528703 1 12760937 12854043 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705350 M 2026 0 1 "" esv993047 1 12762160 12762364 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3566471 M 3 0 1 "" HuRef esv2743831 1 12762216 12762541 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6828994,essv6813164,essv6801613,essv6821176,essv6816687,essv6874699,essv6836181,essv6780863,essv6686149,essv6832593,essv6933298,essv6972332,essv6773436,essv6675194,essv6843787,essv6750591,essv6793276,essv6810336,essv6917417,essv6679162,essv6889001,essv6876743,essv6961547,essv6913994,essv6718161,essv6921711,essv6950546,essv6937672,essv6804398,essv6839966,essv6682819,essv6898608,essv6797443,essv6885978,essv6895844,essv6824975,essv6883254,essv6769511,essv6784989,essv6925686,essv6929055,essv6941776,essv6710575,essv6853230,essv6807369,essv6946489,essv6668941,essv6906093,essv6847007,essv6877661,essv6714238 M 96 0 51 "" SSM010,SSM011,SSM012,SSM014,SSM016,SSM017,SSM018,SSM019,SSM020,SSM021,SSM022,SSM023,SSM024,SSM025,SSM027,SSM029,SSM031,SSM032,SSM033,SSM034,SSM035,SSM042,SSM043,SSM044,SSM057,SSM065,SSM066,SSM068,SSM069,SSM071,SSM072,SSM073,SSM074,SSM075,SSM076,SSM077,SSM079,SSM080,SSM081,SSM082,SSM083,SSM084,SSM086,SSM087,SSM092,SSM093,SSM095,SSM096,SSM097,SSM099,SSM100 esv2675886 1 12762225 12762439 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5426264,essv6431794,essv6515769,essv6219639,essv6473981,essv6090606,essv6274035,essv5894417,essv5621926,essv6038423,essv6355760,essv5758328,essv6235165,essv6069904,essv5918135,essv6570101,essv5799357,essv5651837,essv6088444,essv6219703,essv6345954,essv5826368,essv5736340,essv6283018,essv6406209,essv6202558,essv5520262,essv6439898,essv6230668,essv5677209,essv6266973,essv5510998,essv6590468,essv6529726,essv5659603,essv5722681,essv6537233,essv5407423,essv5905712,essv6301739,essv5772282,essv6139444,essv6167736,essv6246470,essv5615211,essv6016153,essv6361226,essv5765233,essv5695774,essv5562366,essv5677335,essv6126527,essv5452155,essv6577367,essv6010476,essv5457382,essv6426761,essv5520232,essv6592665,essv5419861,essv6262370,essv5652947,essv5803131,essv5879992,essv5665550,essv6058967,essv6302626,essv6228319,essv5620807,essv6491282,essv5990738,essv5447833,essv6287930,essv6003184,essv6263308,essv6443552,essv5433406,essv6063830,essv6196589,essv6052039,essv5868901,essv5515379,essv6366982,essv5935437,essv6208122,essv5482600,essv5460802,essv6120765,essv6226831,essv6366537,essv5446171,essv6491360,essv6473388,essv6465758,essv6411763,essv5650813,essv5982659,essv5403596,essv5404687,essv6107192,essv6096701,essv6336754,essv6058056,essv6005544,essv5541821,essv6024529,essv5926872,essv6177278,essv6378144,essv5603470,essv5578382,essv5871774,essv6512256,essv6487757,essv5904803,essv6510417,essv6166356,essv5602383,essv5562384,essv5495259,essv6299423,essv5532515,essv5505675,essv6181449 M 1151 0 124 "" HG00123,HG00125,HG00131,HG00136,HG00139,HG00140,HG00154,HG00185,HG00237,HG00249,HG00252,HG00254,HG00256,HG00257,HG00258,HG00268,HG00271,HG00276,HG00277,HG00278,HG00282,HG00284,HG00285,HG00310,HG00313,HG00315,HG00318,HG00320,HG00324,HG00325,HG00326,HG00327,HG00330,HG00336,HG00337,HG00342,HG00346,HG00418,HG00419,HG00421,HG00422,HG00428,HG00436,HG00437,HG00442,HG00448,HG00463,HG00472,HG00475,HG00476,HG00500,HG00512,HG00513,HG00524,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00584,HG00590,HG00607,HG00613,HG00614,HG00650,HG00651,HG00663,HG00671,HG00672,HG00689,HG00690,HG00693,HG00701,HG00702,HG00704,HG00705,HG00708,HG01052,HG01055,HG01060,HG01069,HG01070,HG01073,HG01075,HG01082,HG01102,HG01108,HG01170,HG01334,HG01354,HG01365,HG01366,HG01375,HG01389,NA12829,NA18530,NA18534,NA18536,NA18543,NA18544,NA18546,NA18548,NA18557,NA18559,NA18595,NA18596,NA18597,NA18602,NA18606,NA18610,NA18613,NA18623,NA18632,NA18633,NA18635,NA18636,NA18637,NA19076,NA19390,NA19393,NA19452,NA19663,NA19819 dgv114n54 1 12764075 12852235 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545446,nsv545448 M 17421 2 0 "" 1798860570_A dgv115n54 1 12774110 12823268 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545447,nsv545453 M 17421 0 3 "" dgv5n27 1 12774110 12854043 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466505,nsv466727 M 1557 2 0 "" 1798860570_A,HGDP00007 dgv116n54 1 12774110 12858819 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545449,nsv545451,nsv545450,nsv545454 M 17421 0 5 "" HGDP00952,HGDP00988 nsv945774 1 12774773 12901520 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754175,nssv1754248,nssv1754180,nssv1754208,nssv1754176,nssv1754249,nssv1754187,nssv1754210,nssv1754177,nssv1754213,nssv1754181,nssv1754242,nssv1754192,nssv1754216,nssv1754261,nssv1754205,nssv1754256,nssv1754262,nssv1754183,nssv1754270,nssv1754255,nssv1754174,nssv1754179,nssv1754239,nssv1754188,nssv1754240,nssv1754252,nssv1754211,nssv1754186,nssv1754250,nssv1754190,nssv1754263,nssv1754253,nssv1754197,nssv1754258,nssv1754244,nssv1754193,nssv1754225,nssv1754189,nssv1754209,nssv1754191,nssv1754214,nssv1754185,nssv1754206,nssv1754184,nssv1754226,nssv1754254,nssv1754196,nssv1754260,nssv1754237,nssv1754182,nssv1754247,nssv1754257,nssv1754229,nssv1754178,nssv1754198,nssv1754202,nssv1754203,nssv1754238,nssv1754204,nssv1754219,nssv1754245,nssv1754220,nssv1754223,nssv1754271,nssv1754224,nssv1754265,nssv1754264,nssv1754200,nssv1754233,nssv1754207,nssv1754267,nssv1754251,nssv1754243,nssv1754230,nssv1754215,nssv1754236,nssv1754194,nssv1754268,nssv1754241,nssv1754218,nssv1754201,nssv1754228,nssv1754217,nssv1754199,nssv1754231,nssv1754234,nssv1754259,nssv1754221,nssv1754227,nssv1754266,nssv1754269,nssv1754212,nssv1754232,nssv1754195,nssv1754246,nssv1754235 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv6n27 1 12775725 12854043 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv466838,nsv466949,nsv466616 M 1557 0 3 "" 1780862077_A,HGDP00952,HGDP01366 dgv117n54 1 12775725 12858819 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545456,nsv545452 M 17421 3 4 "" 1780862077_A,HGDP00007,HGDP01366 nsv821559 1 12779834 12833211 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1421068 M 1 1 0 "" NA10851 dgv13n67 1 12779834 12849702 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv828586,nsv828697 M 31 0 2 "" AK20,NA18969 nsv471539 1 12780116 12805235 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv547951,nssv547950,nssv547949 M 3 3 0 "" JDW,NA18507,YH nsv955254 1 12780458 12795551 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001822 M 1 1 0 "" BILGI_BIOE esv28644 1 12780465 13050020 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv21420,esv12552,esv19152,esv18833,esv18407,esv13103,esv11679,esv20242,esv16532,esv16950,esv15812,esv11323,esv13474,esv11373,esv15024 M 40 36 11 "" NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv990214 1 12781664 12891244 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586626 M 3 1 0 "" HuRef esv2421662 1 12781785 12911989 OTHER complex Altshuler_et_al_2010 20811451 SNP array essv5050218,essv5098033,essv5049008,essv5061594,essv5107947,essv5040928,essv5120396,essv5150257,essv5088719,essv5024352,essv5124804,essv5111327,essv5144838,essv5018496,essv5109453,essv5059824,essv5097924,essv5116865,essv5129922,essv5073546,essv5128528,essv5003555,essv5022261,essv5134010,essv5138370,essv5051593,essv5012238,essv5053532,essv5117560,essv5131081,essv5102370,essv5139478,essv5116203,essv5114531,essv5102257,essv5039373,essv5159266,essv5066353,essv5018867,essv5109420,essv5132926,essv5084483,essv5067055,essv5027197,essv5009774,essv5106036,essv5122638,essv5102044,essv5133462,essv5038349,essv5143438,essv5017667,essv5009132,essv5072990,essv5104297,essv5030453,essv5121017,essv5053293,essv5057726,essv5089601,essv5041350,essv5115549,essv5159736,essv5048343,essv5140930,essv5040953,essv5038935,essv5065514,essv5140420,essv5098485,essv5034347,essv5077663,essv5024400,essv5061766,essv5023516,essv5109345,essv5115604,essv5098165,essv5013828,essv5025654,essv5122668,essv5082781,essv5074962,essv5029580,essv5089177,essv5006338,essv5018478,essv5068309,essv5064090,essv5116223 M 1184 20 70 "" NA10838,NA10847,NA10853,NA11891,NA11918,NA12044,NA12344,NA12375,NA12383,NA12546,NA12718,NA12753,NA12763,NA12874,NA17962,NA17965,NA17974,NA17996,NA18109,NA18135,NA18144,NA18161,NA18555,NA18559,NA18593,NA18611,NA18614,NA18617,NA18622,NA18624,NA18702,NA18863,NA18923,NA18924,NA18925,NA18951,NA18955,NA18963,NA18965,NA18969,NA18981,NA18990,NA18991,NA19066,NA19083,NA19103,NA19236,NA19313,NA19334,NA19390,NA19436,NA19468,NA19681,NA19683,NA19720,NA19721,NA19747,NA19748,NA19770,NA19789,NA19908,NA19914,NA19915,NA19919,NA20337,NA20542,NA20810,NA20818,NA20828,NA20887,NA21088,NA21102,NA21111,NA21119,NA21144,NA21316,NA21317,NA21318,NA21364,NA21367,NA21381,NA21383,NA21414,NA21512,NA21519,NA21596,NA21635,NA21636,NA21740,NA21784 nsv442270 1 12785720 12823233 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1618013,nssv1616614,nssv1618046,nssv1617913,nssv1618157,nssv1618058,nssv1618257,nssv1618124,nssv1618146,nssv1618169,nssv1618102,nssv1617924,nssv1618202,nssv1618191,nssv1618268,nssv1618080,nssv1617980,nssv1617991,nssv1618091,nssv1618180,nssv1616647,nssv1617969,nssv1618224,nssv1618069,nssv1617935,nssv1618213,nssv1618024,nssv1616636,nssv1617947,nssv1616625,nssv1618035,nssv1617958,nssv1618235,nssv1618135,nssv1618246,nssv1618113,nssv1618002 M 270 9 28 "" NA07019,NA07056,NA10838,NA10857,NA12004,NA12044,NA12753,NA12763,NA12815,NA12865,NA12874,NA18529,NA18555,NA18582,NA18593,NA18603,NA18611,NA18621,NA18622,NA18624,NA18635,NA18861,NA18863,NA18947,NA18951,NA18965,NA18969,NA18978,NA18981,NA18990,NA18991,NA18995,NA18997,NA19000,NA19092,NA19094,NA19103 nsv8768 1 12786012 13382061 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv28049,nssv12121,nssv28559,nssv13099,nssv28931,nssv28554,nssv12779,nssv12438,nssv26898,nssv28919,nssv13763,nssv21427,nssv13428,nssv11777,nssv29267,nssv11776,nssv26880,nssv13414,nssv26895,nssv29271,nssv11772,nssv29256,nssv24599,nssv28545,nssv28056,nssv12108,nssv26897,nssv12120,nssv14753,nssv11783,nssv28939,nssv12111,nssv12439,nssv12773,nssv26883,nssv26881,nssv11766,nssv28051,nssv28948,nssv12094,nssv12752,nssv28556,nssv28928,nssv28540,nssv11775,nssv28945,nssv12763,nssv28039,nssv26878,nssv13744,nssv29278,nssv12101,nssv28920,nssv13769,nssv28032,nssv12109,nssv12107,nssv13109,nssv28541,nssv13098,nssv29259,nssv28944,nssv15113,nssv24622,nssv28544,nssv24616,nssv12424,nssv29249,nssv28053,nssv13103,nssv28043,nssv29269,nssv24598,nssv12443,nssv13753,nssv12112,nssv29275,nssv12093,nssv26899,nssv12429,nssv28041,nssv28932,nssv28933,nssv12437,nssv11769,nssv11770,nssv12767,nssv12450,nssv28560,nssv28549,nssv12422,nssv28938,nssv12105,nssv11763,nssv28555,nssv29258,nssv28936,nssv29265,nssv26890,nssv28546,nssv11771,nssv28929,nssv12769,nssv29257,nssv28941,nssv11779,nssv29250,nssv28550,nssv28047,nssv13429,nssv13084,nssv29264,nssv12441,nssv12113,nssv14093,nssv12426,nssv26904,nssv28557,nssv28935,nssv14099,nssv29268,nssv29277,nssv12096,nssv13433,nssv13423,nssv28539,nssv12435,nssv12103,nssv12765,nssv11762,nssv13093,nssv11790,nssv29266,nssv11781,nssv28947,nssv28040,nssv28036,nssv28543,nssv28050,nssv29274,nssv13439,nssv28035,nssv12099,nssv28033,nssv11780,nssv11778,nssv28547,nssv14429,nssv12768,nssv28934,nssv28553,nssv12092,nssv21451,nssv14083,nssv28943,nssv26901,nssv12780,nssv28042,nssv26891,nssv12754,nssv12433,nssv11764,nssv29253,nssv14074,nssv28937,nssv28531,nssv29263,nssv14423,nssv28923,nssv28551,nssv11782,nssv11774,nssv29261,nssv29262,nssv11791,nssv28927 M 31 30 19 "" NA07029,NA07048,NA10839,NA10847,NA10863,NA11830,NA12155,NA12740,NA12802,NA12872,NA18502,NA18504,NA18517,NA18537,NA18552,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19132,NA19144,NA19173,NA19221,NA19240 dgv14n67 1 12786591 12860185 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv828808,nsv829030 M 31 2 0 "" AK2,NA18997 esv32750 1 12786801 13075119 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv95868,essv99314,essv93105,essv94766,essv96954,essv95436,essv97426,essv92784,essv100377,essv95999,essv95313,essv96818,essv93282,essv92841,essv98305,essv92594,essv95661,essv96187,essv94614,essv95060,essv97209,essv94423,essv100556,essv100986,essv97952,essv97562,essv96257,essv101326,essv101537,essv100225,essv98419,essv97675,essv96690,essv101177,essv96441,essv99068,essv99649 M 51 37 0 "" 21603,21616,21618,21659,21693,21721,21772,21791,21805,21808,21817,21837,21841,21847,21863,21872,21879,21911,21932,21938,21939,21944,22007,22011,22075,22127,22170,22217,22233,22261,22275,22278,22286,22298,22300,22352,22371 dgv118n54 1 12786855 12827689 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545459,nsv545455 M 17421 2 0 "" nsv545457 1 12786855 12893912 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710035 M 17421 0 1 "" dgv119n54 1 12792599 12827689 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545460,nsv545458 M 17421 0 2 "" dgv120n54 1 12792723 12862756 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545463,nsv545471,nsv545461,nsv545475,nsv545476 M 17421 0 11 "" dgv15n67 1 12793543 12838311 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv828919,nsv829141 M 31 0 2 "" AK6,NA18951 esv2669351 1 12793716 12859498 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5455860,essv5886964 M 1151 0 2 "" NA19087,NA19197 nsv545462 1 12794693 12852235 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710040 M 17421 1 0 "" nsv438192 1 12800601 12808101 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468629,nssv468518 M 269 0 2 "" NA19101,NA19103 dgv121n54 1 12800601 12811187 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545464,nsv545474 M 17421 0 3 "" dgv122n54 1 12800601 12820494 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545466,nsv545465 M 17421 0 6 "" HGDP00702,HGDP00999,HGDP01254,HGDP01269 dgv7n27 1 12800601 12820494 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv467171,nsv467505,nsv467394,nsv467283 M 1557 0 4 "" HGDP00702,HGDP00999,HGDP01254,HGDP01269 nsv545467 1 12800601 12823268 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710047,nssv710048,nssv710049 M 17421 2 1 "" nsv470696 1 12800601 12854042 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547707,nssv547708,nssv547704,nssv547705,nssv547706 M 443 5 0 "" HGDP00072,HGDP00560,HGDP00572,HGDP00714,HGDP01317 dgv123n54 1 12800601 12854043 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545469,nsv545470,nsv545480,nsv545485 M 17421 37 63 "" 1780846321_A,1780854128_A,1780854216_A,1780854260_A,1780854261_A,1780854362_A,1780862085_A,1780862294_A,1782681216_A,1798860565_A,HGDP00021,HGDP00072,HGDP00262,HGDP00364,HGDP00560,HGDP00572,HGDP00694,HGDP00707,HGDP00714,HGDP00751,HGDP00856,HGDP00869,HGDP00945,HGDP00950,HGDP01103,HGDP01251,HGDP01306,HGDP01317,HGDP01352,HGDP01372,HGDP01399,HGDP01400,NINDS_109,NINDS_117,NINDS_134,NINDS_182,NINDS_198,NINDS_208,NINDS_219,NINDS_240,NINDS_253,NINDS_258,NINDS_266,NINDS_27,NINDS_50,NINDS_70,NINDS_83,NINDS_90 dgv8n27 1 12800601 12854043 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv468838,nsv457551,nsv456107,nsv456996,nsv456885,nsv460184,nsv457996,nsv468505,nsv457440,nsv460250,nsv460261,nsv456218,nsv460050,nsv458996,nsv460062,nsv458107,nsv458440,nsv458773,nsv460195,nsv457885,nsv459440,nsv456329,nsv460073,nsv459107,nsv458329,nsv456774,nsv455774,nsv460206,nsv457662,nsv455996,nsv460084,nsv459662,nsv457773,nsv457329,nsv460117,nsv460284,nsv469393,nsv460095,nsv467727,nsv469171,nsv467616,nsv460217,nsv460339,nsv458551,nsv456551,nsv460006,nsv460017,nsv459329,nsv460228,nsv457218,nsv460128,nsv460295,nsv459551,nsv455885,nsv468727,nsv460317,nsv460306,nsv460028,nsv460039,nsv456440,nsv460139,nsv458662,nsv459218,nsv460239,nsv456662,nsv458884,nsv460150,nsv460161,nsv460328,nsv468616,nsv460173 M 1557 0 71 "" 1780854095_A,1780854216_A,1780854341_A,1780854357_A,1780854384_A,1780862015_A,1780862229_A,1780862250_A,1780862263_A,1780862346_A,1780862390_A,1780862574_A,1782681236_A,1782681287_A,1787431167_A,1798860277_A,HGDP00106,HGDP00169,HGDP00251,HGDP00267,HGDP00279,HGDP00285,HGDP00351,HGDP00364,HGDP00423,HGDP00694,HGDP00732,HGDP00748,HGDP00751,HGDP00780,HGDP00781,HGDP00791,HGDP00813,HGDP00856,HGDP00869,HGDP00896,HGDP00945,HGDP00950,HGDP00964,HGDP01003,HGDP01010,HGDP01191,HGDP01296,HGDP01306,HGDP01321,HGDP01330,HGDP01338,HGDP01352,HGDP01360,HGDP01361,HGDP01363,HGDP01368,HGDP01369,HGDP01372,HGDP01375,HGDP01400,NINDS_109,NINDS_117,NINDS_134,NINDS_182,NINDS_198,NINDS_219,NINDS_240,NINDS_253,NINDS_258,NINDS_266,NINDS_27,NINDS_50,NINDS_70,NINDS_83,NINDS_90 dgv9n27 1 12800601 12854043 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv458218,nsv469282,nsv459773,nsv459951,nsv469060,nsv455663,nsv459939,nsv468060,nsv468949,nsv468394,nsv467838,nsv459962,nsv459995,nsv460272,nsv460106,nsv467949,nsv459973,nsv459984,nsv457107,nsv468171,nsv468282,nsv459884 M 1557 22 0 "" 1780846321_A,1780854128_A,1780854260_A,1780854261_A,1780854362_A,1780862085_A,1780862294_A,1780862487_A,1782681216_A,1798860565_A,HGDP00021,HGDP00072,HGDP00262,HGDP00560,HGDP00572,HGDP00714,HGDP01033,HGDP01103,HGDP01251,HGDP01317,HGDP01399,NINDS_208 nsv817728 1 12800601 12854043 CNV gain+loss Wang_et_al_2007 17921354 SNP array nssv1418244,nssv1418245,nssv1418338,nssv1418336,nssv1417095,nssv1417408 M 112 4 2 "" NA10847,NA12239,NA18529,NA18951,NA19092,NA19094 dgv124n54 1 12800601 12862756 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545479,nsv545468,nsv545478,nsv545483,nsv545492,nsv545481,nsv545491,nsv545484,nsv545488,nsv545487,nsv545494,nsv545493,nsv545495,nsv545496,nsv545497 M 17421 0 27 "" 1780854357_A,1787431167_A,HGDP00169,HGDP00423,HGDP00709,HGDP00732,HGDP00791,HGDP01003,HGDP01010,HGDP01016,HGDP01296,HGDP01338,HGDP01368 dgv125n54 1 12800601 13048420 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545473,nsv545472 M 17421 0 2 "" dgv126n54 1 12805784 12820494 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545477,nsv545482 M 17421 0 2 "" dgv1n64 1 12805784 12854043 CNV loss Wang_et_al_2007 17921354 SNP array nsv817839,nsv818045,nsv817950 M 112 0 6 "" NA10857,NA12044,NA12865,NA12874,NA18593,NA18965 nsv545486 1 12806932 12827689 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710118 M 17421 0 1 "" nsv829252 1 12806998 12807600 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440800 M 31 0 1 "" NA18969 esv2743842 1 12808617 12808929 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972333 M 96 0 1 "" SSM029 nsv2965 1 12810402 13118434 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5045,nssv10340,nssv9308,nssv3620 M 9 0 4 "" NA12878,NA18517,NA18956,NA19129 nsv829363 1 12810801 12812829 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1440801 M 31 0 1 "" NA18969 nsv545489 1 12811189 12820494 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710121,nssv710120 M 17421 0 2 "" nsv545490 1 12811189 12839881 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710122 M 17421 0 1 "" esv2743853 1 12811195 12933481 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6784532,essv6675195,essv6793278,essv6764156,essv6910037,essv6917420,essv6863951,essv6669166,essv6747772,essv6742134,essv6950547,essv6807370,essv6843798,essv6668942,essv6847008 M 96 0 15 "" SSM005,SSM009,SSM011,SSM015,SSM017,SSM025,SSM031,SSM032,SSM053,SSM056,SSM063,SSM071,SSM075,SSM086,SSM089 dgv127n54 1 12815282 12859212 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545500,nsv545499,nsv545498,nsv545501,nsv545502 M 17421 0 13 "" HGDP00662 esv1063166 1 12816363 12816363 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4300681 M 2 1 0 "" HuRef nsv7172 1 12819832 13271532 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9624,nssv10403,nssv3714,nssv7060,nssv2496,nssv11101,nssv10379,nssv5133,nssv9625,nssv382,nssv6080,nssv11168,nssv5213,nssv9329,nssv5286,nssv7150 M 9 0 0 "" NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv460350 1 12820292 12854043 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv536942 M 1557 0 1 "" HGDP00662 nsv433182 1 12820494 12901196 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463063 M 9 0 1 "" NA15510 nsv955255 1 12828441 12834849 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001834 M 1 1 0 "" BILGI_BIOE esv3428728 1 12830310 12833109 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691774 M 185 1 0 "" NA12878 dgv6e201 1 12830768 12888583 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2743864,esv2743897 M 96 0 14 "" SSM005,SSM009,SSM011,SSM015,SSM017,SSM025,SSM031,SSM032,SSM053,SSM063,SSM071,SSM075,SSM086,SSM089 dgv129n54 1 12830906 12954384 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545508,nsv545504,nsv545517,nsv545516,nsv545526 M 17421 0 6 "" esv2743875 1 12832230 12849647 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6863951,essv6793278,essv6910037,essv6917420,essv6843798,essv6669166,essv6807370,essv6668942,essv6847008 M 96 0 9 "" SSM005,SSM011,SSM015,SSM017,SSM031,SSM071,SSM075,SSM086,SSM089 nsv820528 1 12833212 13044394 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1419881 M 1 0 1 "" NA10851 nsv436469 1 12833396 12888931 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466583 M 2 0 1 "" NA18505 dgv130n54 1 12834668 12864107 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545507,nsv545506 M 17421 0 3 "" dgv16n67 1 12837911 12860333 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829448,nsv829437,nsv829426,nsv829459 M 31 7 0 "" AK10,NA18526,NA18564,NA18570,NA18947,NA18949,NA18972 esv2743908 1 12838164 12838507 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6910037,essv6917420,essv6863951,essv6669166,essv6843798,essv6807370,essv6847008 M 96 0 7 "" SSM005,SSM011,SSM015,SSM017,SSM075,SSM086,SSM089 esv2678231 1 12838775 12953515 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5596796 M 1151 0 1 "" NA19661 dgv131n54 1 12839881 12864757 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545509,nsv545510,nsv545511,nsv545512,nsv545514,nsv545513,nsv545515 M 17421 0 38 "" esv2743920 1 12844726 12849657 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6764156 M 96 0 1 "" SSM063 esv2743942 1 12848979 12886468 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6675195 M 96 0 1 "" SSM032 nsv442514 1 12849384 12867264 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617124,nssv1616980,nssv1617146,nssv1616680,nssv1617035,nssv1616880,nssv1616802,nssv1617202,nssv1617180,nssv1617091,nssv1616836,nssv1616758,nssv1616991,nssv1617102,nssv1617235,nssv1617058,nssv1616824,nssv1617046,nssv1616969,nssv1616791,nssv1616913,nssv1616902,nssv1617268,nssv1616891,nssv1616958,nssv1616813,nssv1616713,nssv1616736,nssv1617113,nssv1617002,nssv1617280,nssv1617013,nssv1616769,nssv1617080,nssv1617135,nssv1616947,nssv1617069,nssv1617157,nssv1617302,nssv1616924,nssv1616669,nssv1616702,nssv1617257,nssv1617191,nssv1617224,nssv1617246,nssv1616747,nssv1616658,nssv1617213,nssv1616847,nssv1616869,nssv1616691,nssv1617024,nssv1617313,nssv1616725,nssv1617291,nssv1616935,nssv1616858,nssv1616780,nssv1617169 M 270 31 29 "" NA06994,NA07345,NA07348,NA10838,NA10847,NA10851,NA10857,NA12003,NA12004,NA12044,NA12057,NA12239,NA12717,NA12751,NA12753,NA12763,NA12815,NA12864,NA12865,NA12873,NA12874,NA12875,NA18501,NA18506,NA18508,NA18526,NA18550,NA18563,NA18564,NA18566,NA18570,NA18593,NA18609,NA18611,NA18612,NA18622,NA18636,NA18861,NA18863,NA18940,NA18949,NA18951,NA18952,NA18964,NA18965,NA18969,NA18971,NA18972,NA18981,NA18991,NA18992,NA18997,NA18998,NA19005,NA19092,NA19103,NA19116,NA19127,NA19129,NA19222 dgv132n54 1 12849386 12861255 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545519,nsv545518,nsv545522,nsv545525 M 17421 0 4 "" dgv10n27 1 12851347 12854043 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460428,nsv460461,nsv460439,nsv460450,nsv460472,nsv460395,nsv460361,nsv460417,nsv460406,nsv460383,nsv460372 M 1557 0 11 "" HGDP00467,HGDP00541,HGDP00702,HGDP00832,HGDP00837,HGDP00846,HGDP00849,HGDP00876,HGDP00984,HGDP00995,HGDP00999 nsv545520 1 12851347 12854043 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173752,nssv1173766,nssv1173764,nssv1173750,nssv1173767,nssv1173751,nssv1173753,nssv1173754,nssv1173755,nssv1173756,nssv1173757,nssv1173765,nssv1173758,nssv1173759,nssv1173760,nssv1173761,nssv1173763,nssv1173762 M 17421 0 18 "" HGDP00467,HGDP00541,HGDP00702,HGDP00830,HGDP00832,HGDP00833,HGDP00834,HGDP00837,HGDP00844,HGDP00846,HGDP00847,HGDP00848,HGDP00849,HGDP00850,HGDP00876,HGDP00984,HGDP00995,HGDP00999 dgv133n54 1 12851347 12859579 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545521,nsv545524,nsv545523 M 17421 0 4 "" nsv955256 1 12853948 12889470 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001845 M 1 1 0 "" BILGI_BIOE dgv134n54 1 12855993 13050003 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545528,nsv545527 M 17421 2 0 "" esv3326797 1 12874144 12875442 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691776 M 185 1 0 "" NA12878 dgv135n54 1 12879572 12951631 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545529,nsv545530,nsv545533,nsv545531 M 17421 0 5 "" esv3435358 1 12884044 12885642 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691777 M 185 1 0 "" NA12878 nsv958827 1 12887838 12888229 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005182 M 1 0 1 "" BILGI_BIOE esv2665195 1 12890015 12906348 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5702422,essv5828485,essv6179555,essv6094799,essv5699349,essv6170724,essv5737883,essv6035703,essv5403358,essv6305066 M 1151 0 10 "" NA19661,NA19663,NA19664,NA19681,NA19726,NA19746,NA19747,NA19770,NA19782,NA19789 nsv545532 1 12891943 12925418 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710207 M 17421 0 1 "" nsv945775 1 12901520 12914733 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754278,nssv1751545,nssv1754275,nssv1754272,nssv1754273,nssv1751573,nssv1754285,nssv1751569,nssv1754279,nssv1751543,nssv1754276,nssv1751557,nssv1754282,nssv1751552,nssv1751576,nssv1751547,nssv1754281,nssv1751555,nssv1751584,nssv1751551,nssv1754286,nssv1751546,nssv1754277,nssv1751521,nssv1751578,nssv1751532,nssv1751517,nssv1751536,nssv1751516,nssv1751530,nssv1754284,nssv1751524,nssv1751577,nssv1751559,nssv1751579,nssv1751554,nssv1754274,nssv1751570,nssv1754283,nssv1751561,nssv1751581,nssv1751533,nssv1751580,nssv1751568,nssv1751518,nssv1751527,nssv1754287,nssv1751572,nssv1751583,nssv1751541,nssv1751515,nssv1751571,nssv1751574,nssv1751523,nssv1754280,nssv1751535,nssv1751550,nssv1751548,nssv1751537,nssv1751549,nssv1751540,nssv1751565,nssv1751528,nssv1751567,nssv1751544,nssv1751562,nssv1751582,nssv1751560,nssv1751534,nssv1751525,nssv1751529,nssv1751519,nssv1751522,nssv1751558,nssv1751539,nssv1751556,nssv1751526,nssv1751566,nssv1751538,nssv1751563 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545534 1 12921240 12938349 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710210 M 17421 0 1 "" nsv945564 1 12942614 12945236 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572325,nssv2572338,nssv2572312,nssv2572271,nssv2572318,nssv2572343,nssv2572310,nssv2572337,nssv2572297,nssv2572273,nssv2572327,nssv2572266,nssv2572320,nssv2572270,nssv2572303,nssv2572269,nssv2572307,nssv2572340,nssv2572328,nssv2572272,nssv2572317,nssv2572276,nssv2572285,nssv2572279,nssv2572301,nssv2572274,nssv2572321,nssv2572278,nssv2572326,nssv2572265,nssv2572333,nssv2572335,nssv2572324,nssv2572341,nssv2572288,nssv2572268,nssv2572342,nssv2572277,nssv2572334,nssv2572282,nssv2572293,nssv2572336,nssv2572290,nssv2572344,nssv2572286,nssv2572281,nssv2572313,nssv2572275,nssv2572309,nssv2572267,nssv2572316,nssv2572283,nssv2572294,nssv2572339,nssv2572311,nssv2572280,nssv2572331,nssv2572323,nssv2572289,nssv2572299,nssv2572322,nssv2572319,nssv2572314,nssv2572304,nssv2572300,nssv2572306,nssv2572287,nssv2572291,nssv2572292,nssv2572305,nssv2572315,nssv2572264,nssv2572296,nssv2572330,nssv2572302,nssv2572308,nssv2572298,nssv2572295,nssv2572284,nssv2572332 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821036 1 13044395 13050020 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1419992 M 1 1 0 "" NA10851 dgv17n67 1 13075113 13120697 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv829481,nsv829470,nsv829492 M 31 6 0 "" AK4,AK8,NA18564,NA18566,NA18592,NA18947 nsv545541 1 13075113 13151495 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710218 M 17421 0 1 "" nsv545542 1 13075271 13107480 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710219 M 17421 0 1 "" nsv112 1 13092300 13094831 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv112 M 1 1 0 "" NA15510 nsv821333 1 13094253 13152244 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420214 M 1 1 0 "" NA10851 nsv545543 1 13106637 13111025 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710220 M 17421 0 1 "" nsv953504 1 13109029 13120527 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001867 M 1 1 0 "" BILGI_BIOE dgv137n54 1 13111025 13151920 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545544,nsv545545 M 17421 0 2 "" esv2743964 1 13111235 13120330 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6753491,essv6859185,essv6843809,essv6801614,essv6764157,essv6689255,essv6689253,essv6821178,essv6836182,essv6709708,essv6874700,essv6880416,essv6880415,essv6686150,essv6933299,essv6843880,essv6972334,essv6859184,essv6679163,essv6913995,essv6793279,essv6703859,essv6889002,essv6910036,essv6722002,essv6917419,essv6784543,essv6695632,essv6696986,essv6889003,essv6876754,essv6839967,essv6921712,essv6759038,essv6718162,essv6950185,essv6863954,essv6937674,essv6748298,essv6916651,essv6707261,essv6682822,essv6682823,essv6797445,essv6797444,essv6725846,essv6885980,essv6725847,essv6868706,essv6885979,essv6868707,essv6824977,essv6902526,essv6729614,essv6747773,essv6824978,essv6669177,essv6742135,essv6692756,essv6853232,essv6761849,essv6789145,essv6807372,essv6784990,essv6807371,essv6669188,essv6946491,essv6946490,essv6668945,essv6906095,essv6906094,essv6847010,essv6871710,essv6847011,essv6877662,essv6750592,essv6735974,essv6714239 M 96 0 63 "" SSM001,SSM003,SSM004,SSM005,SSM006,SSM008,SSM009,SSM011,SSM012,SSM013,SSM014,SSM015,SSM016,SSM017,SSM018,SSM021,SSM022,SSM024,SSM029,SSM031,SSM033,SSM034,SSM035,SSM036,SSM037,SSM038,SSM040,SSM041,SSM043,SSM044,SSM045,SSM046,SSM047,SSM050,SSM053,SSM056,SSM057,SSM058,SSM061,SSM062,SSM063,SSM069,SSM070,SSM071,SSM072,SSM073,SSM075,SSM079,SSM080,SSM083,SSM084,SSM085,SSM086,SSM087,SSM088,SSM089,SSM090,SSM091,SSM092,SSM093,SSM094,SSM096,SSM097 esv8453 1 13111249 13120443 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30894 M 1 0 0 "" esv2675846 1 13111300 13120043 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5550447,essv5492472,essv6451370,essv5831266,essv6552450,essv5829847,essv6220028,essv6055049,essv6212375,essv5598686,essv6192563,essv5583076,essv6508438,essv6316601 M 1151 0 14 "" HG00537,NA07357,NA10851,NA11918,NA18489,NA18593,NA19093,NA19099,NA19108,NA19147,NA19225,NA19835,NA20522,NA20529 esv2743975 1 13114196 13133690 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6889004 M 96 0 1 "" SSM097 esv3416903 1 13114893 13115291 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691778 M 185 1 0 "" NA12878 esv3430112 1 13118893 13120590 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691779 M 185 1 0 "" NA12878 nsv953505 1 13142450 13152449 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3001878 M 1 1 0 "" BILGI_BIOE esv987716 1 13144455 13152461 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586238 M 3 1 0 "" HuRef esv3397866 1 13148614 13152312 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691780 M 185 1 0 "" NA12878 esv1000242 1 13184566 13263232 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586500 M 3 1 0 "" HuRef nsv545546 1 13184639 13188017 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710223 M 17421 0 1 "" dgv138n54 1 13184639 13189470 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545555,nsv545548,nsv545547,nsv545549,nsv545553,nsv545557 M 17421 0 11 "" dgv139n54 1 13184639 13190717 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545550,nsv545558 M 17421 3 0 "" dgv140n54 1 13184639 13190925 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545554,nsv545551,nsv545556 M 17421 0 3 "" esv25471 1 13184700 13382061 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12763,esv12571,esv16485,esv18416,esv17726,esv18444,esv20457,esv10590,esv12877,esv17055,esv17976,esv15096 M 40 34 11 "" NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12776,NA12828,NA12878,NA18502,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv545552 1 13185030 13188750 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710235,nssv710237,nssv710234,nssv710236 M 17421 1 3 "" nsv945778 1 13221843 13284263 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752432,nssv1752475,nssv1752420,nssv1752519,nssv1752508,nssv1752448,nssv1752500,nssv1752520,nssv1752424,nssv1752447,nssv1752425,nssv1752453,nssv1752503,nssv1752446,nssv1752421,nssv1752512,nssv1752428,nssv1752493,nssv1752419,nssv1752516,nssv1752418,nssv1752490,nssv1752501,nssv1752514,nssv1752509,nssv1752451,nssv1752435,nssv1752472,nssv1752502,nssv1752452,nssv1752417,nssv1752498,nssv1752431,nssv1752473,nssv1752427,nssv1752450,nssv1752505,nssv1752517,nssv1752426,nssv1752518,nssv1752436,nssv1752481,nssv1752423,nssv1752456,nssv1752506,nssv1752489,nssv1752416,nssv1752479,nssv1752504,nssv1752457,nssv1752429,nssv1752442,nssv1752434,nssv1752440,nssv1752430,nssv1752515,nssv1752482,nssv1752483,nssv1752495,nssv1752469,nssv1752439,nssv1752441,nssv1752485,nssv1752461,nssv1752494,nssv1752487,nssv1752454,nssv1752460,nssv1752464,nssv1752471,nssv1752507,nssv1752449,nssv1752492,nssv1752496,nssv1752480,nssv1752468,nssv1752491,nssv1752437,nssv1752462,nssv1752463,nssv1752513,nssv1752486,nssv1752474,nssv1752467,nssv1752465,nssv1752497,nssv1752438,nssv1752443,nssv1752484,nssv1752458,nssv1752470,nssv1752478,nssv1752459,nssv1752445,nssv1752476,nssv1752511,nssv1752415 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv832981 1 13225431 13382061 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442807 M 95 0 1 "" nsv511155 1 13234489 13240197 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626055 M 1 0 1 "" 1 nsv545559 1 13236333 13239943 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710245 M 17421 0 1 "" nsv472969 1 13237256 13237256 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012443 M 9 1 0 "" NA19129 nsv821207 1 13241389 13323797 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420225 M 1 0 1 "" NA10851 nsv953508 1 13241778 13274190 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3001911 M 1 0 1 "" BILGI_BIOE esv2743986 1 13247917 13382061 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6800932,essv6917421,essv6784554,essv6748309,essv6742136,essv6816577,essv6853233 M 96 0 7 "" SSM002,SSM008,SSM009,SSM017,SSM053,SSM078,SSM087 esv2665484 1 13262723 13269471 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6461686,essv5974248,essv6410534,essv5815259,essv6431464,essv6122402,essv6514155,essv5921103,essv6591719,essv5650208,essv6560799,essv5833750,essv6525145,essv5452069,essv6444431,essv5820341,essv6436500,essv5703881,essv6475366,essv5805042,essv5430621,essv5775135,essv5691405,essv5773314,essv5430477,essv5691512,essv5901173,essv5696953,essv5716590,essv6168348,essv5783116,essv5463844,essv6282087,essv5882418,essv5893957,essv6138136,essv5615380,essv5555972,essv5522244,essv5494076,essv5525648,essv6288394,essv6333942,essv5863970,essv5959523,essv5925897,essv6087877,essv5435009,essv5652728,essv6092066,essv6096804,essv5497301,essv5444057,essv5506822,essv6225081,essv5968831,essv5573162,essv5460337,essv5518347,essv6020722,essv5941913,essv6344402,essv6004250,essv6365909,essv5591357 M 1151 0 65 "" NA06984,NA06986,NA06989,NA06994,NA07037,NA07048,NA07056,NA07346,NA07347,NA07357,NA10851,NA11829,NA11830,NA11831,NA11832,NA11843,NA11881,NA11892,NA11893,NA11894,NA11919,NA11920,NA11930,NA11931,NA11932,NA11933,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12006,NA12043,NA12044,NA12045,NA12046,NA12058,NA12144,NA12154,NA12155,NA12156,NA12272,NA12273,NA12275,NA12286,NA12287,NA12340,NA12341,NA12347,NA12348,NA12383,NA12399,NA12413,NA12546,NA12716,NA12717,NA12750,NA12751,NA12761,NA12763,NA12776,NA12778,NA12813,NA12828 esv2762131 1 13269724 13271426 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005005 M 1109 0 1 "" RW_0543 nsv953509 1 13278691 13338178 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003030 M 1 0 1 "" BILGI_BIOE nsv945779 1 13284263 13284763 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1752529,nssv1752549,nssv1753527,nssv1753519,nssv1752539,nssv1752557,nssv1752530,nssv1753513,nssv1752527,nssv1752560,nssv1752531,nssv1752544,nssv1752535,nssv1752566,nssv1753523,nssv1752559,nssv1753525,nssv1753515,nssv1753531,nssv1753498,nssv1753529,nssv1753530,nssv1752525,nssv1752546,nssv1752533,nssv1752551,nssv1753524,nssv1752564,nssv1752528,nssv1752522,nssv1752524,nssv1752545,nssv1752541,nssv1753495,nssv1752534,nssv1753520,nssv1752537,nssv1753505,nssv1752526,nssv1752562,nssv1753532,nssv1753496,nssv1753526,nssv1752553,nssv1752542,nssv1753508,nssv1752523,nssv1753493,nssv1753528,nssv1752552,nssv1752536,nssv1753492,nssv1752540,nssv1753517,nssv1752538,nssv1753514,nssv1753516,nssv1753518,nssv1753509,nssv1753497,nssv1753507,nssv1753504,nssv1752556,nssv1752561,nssv1752558,nssv1752550,nssv1753512,nssv1753501,nssv1752563,nssv1753503,nssv1753510,nssv1753521,nssv1753494,nssv1752547,nssv1753502,nssv1752555,nssv1752548,nssv1752567,nssv1753506,nssv1753499 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv141n54 1 13287032 13348434 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545563,nsv545562,nsv545561 M 17421 0 3 "" nsv545564 1 13287032 13380451 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710250 M 17421 0 1 "" nsv945784 1 13287073 13290405 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753896,nssv1753913,nssv1753949,nssv1753902,nssv1753889,nssv1753944,nssv1753885,nssv1753923,nssv1753886,nssv1753904,nssv1753892,nssv1753945,nssv1753957,nssv1753933,nssv1753955,nssv1753943,nssv1753887,nssv1753937,nssv1753958,nssv1753916,nssv1753953,nssv1753941,nssv1753884,nssv1753921,nssv1753893,nssv1753900,nssv1753888,nssv1753919,nssv1753895,nssv1753942,nssv1753897,nssv1753914,nssv1753891,nssv1753946,nssv1753950,nssv1753901,nssv1753894,nssv1753930,nssv1753898,nssv1753911,nssv1753951,nssv1753934,nssv1753881,nssv1753879,nssv1753880,nssv1753908,nssv1753890,nssv1753940,nssv1753883,nssv1753925,nssv1753952,nssv1753948,nssv1753954,nssv1753927,nssv1753882,nssv1753907,nssv1753956,nssv1753909,nssv1753910,nssv1753924,nssv1753928,nssv1753905,nssv1753920,nssv1753938,nssv1753922,nssv1753899,nssv1753929,nssv1753936,nssv1753917,nssv1753912,nssv1753931,nssv1753906,nssv1753939,nssv1753903,nssv1753935,nssv1753932,nssv1753915,nssv1753947,nssv1753918,nssv1753926 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545565 1 13290517 13313330 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710251 M 17421 0 1 "" nsv545566 1 13300367 13344672 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710252 M 17421 0 1 "" esv1001235 1 13311456 13369718 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586342 M 3 1 0 "" HuRef nsv945566 1 13311584 13314853 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2572747,nssv2572774,nssv2572752,nssv2572759,nssv2572810,nssv2572788,nssv2572750,nssv2572799,nssv2572736,nssv2572778,nssv2572742,nssv2572797,nssv2572751,nssv2572782,nssv2572748,nssv2572760,nssv2572735,nssv2572766,nssv2572737,nssv2572785,nssv2572739,nssv2572754,nssv2572812,nssv2572791,nssv2572753,nssv2572792,nssv2572745,nssv2572794,nssv2572741,nssv2572789,nssv2572809,nssv2572775,nssv2572807,nssv2572773,nssv2572806,nssv2572802,nssv2572804,nssv2572763,nssv2572734,nssv2572780,nssv2572740,nssv2572758,nssv2572813,nssv2572798,nssv2572749,nssv2572793,nssv2572808,nssv2572803,nssv2572805,nssv2572783,nssv2572744,nssv2572795,nssv2572746,nssv2572755,nssv2572743,nssv2572765,nssv2572811,nssv2572787,nssv2572779,nssv2572771,nssv2572756,nssv2572776,nssv2572768,nssv2572784,nssv2572777,nssv2572800,nssv2572801,nssv2572790,nssv2572762,nssv2572764,nssv2572781,nssv2572761,nssv2572786,nssv2572733,nssv2572772,nssv2572769,nssv2572796,nssv2572770,nssv2572757,nssv2572767 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3417900 1 13317770 13319068 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691781 M 185 1 0 "" NA12878 nsv953510 1 13338179 13367078 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003041 M 1 1 0 "" BILGI_BIOE nsv442562 1 13339386 13362453 CNV gain+loss McCarroll_et_al_2008 18776908 SNP array nssv1617388,nssv1617394,nssv1617385,nssv1617384,nssv1617365,nssv1617370,nssv1617368,nssv1617360,nssv1617362,nssv1617367,nssv1617378,nssv1617396,nssv1617359,nssv1617390,nssv1617386,nssv1617383,nssv1617376,nssv1617395,nssv1617372,nssv1617379,nssv1617373,nssv1617397,nssv1617393,nssv1617381,nssv1617371,nssv1617363,nssv1617400,nssv1617364,nssv1617401,nssv1617356,nssv1617357,nssv1617382,nssv1617375,nssv1617377,nssv1617361,nssv1617335,nssv1617324,nssv1617346,nssv1617366,nssv1617387,nssv1617389,nssv1617398,nssv1617355,nssv1617374,nssv1617399 M 270 4 41 "" NA07019,NA07022,NA07056,NA10847,NA12003,NA12004,NA12239,NA18526,NA18529,NA18540,NA18542,NA18550,NA18555,NA18563,NA18564,NA18566,NA18570,NA18573,NA18577,NA18579,NA18592,NA18603,NA18612,NA18621,NA18622,NA18624,NA18633,NA18635,NA18636,NA18637,NA18940,NA18947,NA18948,NA18952,NA18964,NA18969,NA18971,NA18978,NA18990,NA18992,NA18995,NA18998,NA19005,NA19119,NA19120 nsv953512 1 13346024 13367342 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003064 M 1 1 0 "" BILGI_BIOE esv3365276 1 13356560 13361458 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691782 M 185 1 0 "" NA12878 esv3430097 1 13361160 13363405 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8691783 M 185 1 0 "" NA12891 esv1751185 1 13362867 13362920 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3633436 M 2 0 1 "" HuRef nsv953522 1 13382063 13446033 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003075 M 1 0 1 "" BILGI_BIOE dgv16e199 1 13382063 13448125 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2677250,esv2660387 M 1151 0 374 "" HG00403,HG00404,HG00418,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00556,HG00557,HG00559,HG00560,HG00565,HG00566,HG00577,HG00578,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00593,HG00595,HG00596,HG00607,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00620,HG00625,HG00626,HG00628,HG00629,HG00634,HG00635,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708,NA19311,NA19312,NA19313,NA19315,NA19316,NA19317,NA19318,NA19319,NA19321,NA19324,NA19327,NA19328,NA19331,NA19332,NA19334,NA19338,NA19346,NA19347,NA19350,NA19355,NA19359,NA19360,NA19371,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19391,NA19393,NA19394,NA19395,NA19396,NA19397,NA19398,NA19399,NA19401,NA19403,NA19404,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19446,NA19448,NA19449,NA19451,NA19452,NA19453,NA19455,NA19456,NA19457,NA19461,NA19462,NA19463,NA19466,NA19467,NA19468,NA19469,NA19470,NA19471,NA19472,NA19473,NA19474,NA19625,NA19648,NA19651,NA19652,NA19654,NA19655,NA19657,NA19660,NA19661,NA19663,NA19664,NA19675,NA19676,NA19678,NA19679,NA19681,NA19682,NA19684,NA19685,NA19700,NA19701,NA19703,NA19704,NA19707,NA19711,NA19712,NA19713,NA19716,NA19717,NA19719,NA19720,NA19722,NA19723,NA19725,NA19726,NA19728,NA19729,NA19731,NA19732,NA19746,NA19747,NA19749,NA19750,NA19755,NA19756,NA19758,NA19759,NA19761,NA19762,NA19770,NA19771,NA19773,NA19774,NA19776,NA19777,NA19779,NA19780,NA19782,NA19783,NA19785,NA19786,NA19788,NA19789,NA19818,NA19819,NA19834,NA19835,NA19901,NA19904,NA19908,NA19914,NA19916,NA19917,NA19920,NA19921,NA19982,NA19985,NA20126,NA20127,NA20276,NA20278,NA20281,NA20282,NA20287,NA20289,NA20291,NA20294,NA20296,NA20299,NA20314,NA20317,NA20322,NA20332,NA20334,NA20336,NA20340,NA20341,NA20342,NA20344,NA20346,NA20348,NA20356,NA20502,NA20503,NA20504,NA20505,NA20506,NA20507,NA20508,NA20509,NA20510,NA20512,NA20513,NA20514,NA20515,NA20516,NA20517,NA20518,NA20519,NA20520,NA20522,NA20524,NA20525,NA20526,NA20527,NA20528,NA20529,NA20530,NA20531,NA20532,NA20533,NA20534,NA20535,NA20536,NA20537,NA20538,NA20539,NA20540,NA20541,NA20542,NA20543,NA20544,NA20582,NA20585,NA20586,NA20588,NA20589,NA20752,NA20753,NA20754,NA20755,NA20756,NA20757,NA20758,NA20759,NA20760,NA20761,NA20765,NA20766,NA20768,NA20769,NA20770,NA20771,NA20772,NA20773,NA20774,NA20775,NA20778,NA20783,NA20785,NA20786,NA20787,NA20790,NA20792,NA20795,NA20796,NA20797,NA20798,NA20799,NA20800,NA20801,NA20802,NA20803,NA20804,NA20806,NA20807,NA20808,NA20809,NA20810,NA20811,NA20812,NA20813,NA20814,NA20815,NA20816,NA20818,NA20819,NA20826,NA20828 nsv545560 1 13384182 13384432 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710246 M 17421 0 1 "" nsv8879 1 13414420 13426784 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv28030 M 31 1 0 "" NA10847 nsv9102 1 13436008 13455728 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv13431,nssv13441,nssv15449,nssv12762,nssv13770 M 31 1 4 "" NA18502,NA18860,NA19173,NA19221,NA19240 esv27160 1 13447617 13450992 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17463 M 40 0 4 "" NA18523,NA18858,NA19240,NA19257 nsv829503 1 13447650 13448452 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1425488 M 31 1 0 "" AK4 esv2421816 1 13448559 13450361 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5152519,essv5088842,essv5051994,essv5078655,essv5029052,essv5136291,essv5074912,essv5058297,essv5093159,essv5047739,essv5103764,essv5154357,essv5038344,essv5156754,essv5070195,essv5138283,essv5145851,essv5160977,essv5014986,essv5124207,essv5133703,essv5037812,essv5154618,essv5053308,essv5146662,essv5054130,essv5113890,essv5113231,essv5152549,essv5020433,essv5055935,essv5089793,essv5115047,essv5043697,essv5153368,essv5113057,essv5119368,essv5115799,essv5153639,essv5116299,essv5130030,essv5113322,essv5054861,essv5040208,essv5087732,essv5062851,essv5089820,essv5119297,essv5037910,essv5140759,essv5149288,essv5057582,essv5084227,essv5063651,essv5003662,essv5052409,essv5101761,essv5101907,essv5022297,essv5104141,essv5068630,essv5130729,essv5119113,essv5085452,essv5059200,essv5130132,essv5154171,essv5129509,essv5141839,essv5008201,essv5081621,essv5159320,essv5122714,essv5112792,essv5030554,essv5012309,essv5019707,essv5148013,essv5078647 M 1184 0 79 "" NA12340,NA18486,NA18497,NA18498,NA18500,NA18515,NA18516,NA18520,NA18858,NA18860,NA18910,NA19027,NA19028,NA19095,NA19097,NA19107,NA19109,NA19117,NA19137,NA19153,NA19154,NA19172,NA19173,NA19174,NA19197,NA19199,NA19206,NA19209,NA19210,NA19211,NA19239,NA19240,NA19257,NA19258,NA19307,NA19321,NA19381,NA19382,NA19403,NA19429,NA19438,NA19449,NA19451,NA19452,NA19463,NA19466,NA19468,NA19471,NA19474,NA20282,NA20297,NA20301,NA20332,NA20335,NA20348,NA20521,NA20768,NA20796,NA20799,NA20894,NA20906,NA21344,NA21359,NA21366,NA21381,NA21383,NA21399,NA21401,NA21402,NA21404,NA21405,NA21473,NA21520,NA21596,NA21608,NA21614,NA21616,NA21686,NA21740 esv24967 1 13451755 13454644 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv20195,esv13012 M 40 2 0 "" NA12878,NA18907 esv2504117 1 13469871 13470462 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5309749 M 1 1 0 "" NA18507 nsv833092 1 13478451 13637429 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442829,nssv1442818 M 95 0 2 "" nsv518971 1 13479571 13489669 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696439 M 2026 0 1 "" esv2743997 1 13501478 13501772 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6753492,essv6847012 M 96 0 2 "" SSM058,SSM086 esv2667214 1 13501502 13501687 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6551447,essv5883876,essv6486467,essv5678857,essv6581615,essv6375468,essv6597214,essv5627382,essv6527450,essv6045496,essv6574648,essv6472157,essv6597905,essv6335162,essv6554198,essv5507820,essv6525437,essv6404963,essv5968490,essv5752641,essv5887391,essv6097172,essv6136422,essv5829553,essv6405631,essv5927303,essv5693025,essv6300070,essv5447578,essv6010861,essv5979848,essv5817662,essv5882652,essv6010364,essv6129928,essv6465113,essv5453421,essv5688382,essv5499304,essv5589979,essv5849354,essv6282862,essv6009858,essv5430608,essv6295186,essv6165043,essv5654703,essv5529075,essv6133155,essv5878044,essv6220064,essv6010231,essv5997060,essv6049111,essv6307016,essv6434833,essv5996805,essv6251516,essv6276556,essv5633266,essv5652502,essv6110467,essv6351454,essv5926579,essv5645853,essv5490185,essv5437821,essv5474916,essv6174435,essv5527918,essv5528342,essv5525495,essv5571879,essv5629333,essv6327539,essv6272089,essv5540905,essv6270017,essv5424672,essv5996246,essv6354439 M 1151 0 81 "" HG00096,HG00108,HG00123,HG00125,HG00136,HG00137,HG00158,HG00232,HG00249,HG00252,HG00253,HG00277,HG00281,HG00282,HG00309,HG00313,HG00318,HG00324,HG00327,HG00336,HG00345,HG00346,HG00421,HG00437,HG00512,HG00524,HG00533,HG00583,HG00584,HG00589,HG00607,HG00608,HG00651,HG00690,HG00698,HG01052,HG01060,HG01069,HG01070,HG01174,HG01187,HG01334,HG01353,HG01365,HG01366,HG01375,HG01377,HG01384,HG01437,HG01441,HG01492,NA07347,NA10851,NA11894,NA11918,NA11930,NA11995,NA12003,NA12155,NA18548,NA18552,NA18633,NA18636,NA18856,NA18940,NA19093,NA19116,NA19225,NA19321,NA19360,NA19371,NA19374,NA19383,NA19391,NA19394,NA19395,NA19396,NA19397,NA19399,NA19428,NA20341 esv2744008 1 13521666 13522533 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6776929,essv6933300,essv6972336,essv6703860,essv6937675,essv6738806,essv6682824,essv6707262,essv6718854 M 96 0 9 "" SSM007,SSM021,SSM022,SSM029,SSM034,SSM040,SSM041,SSM052,SSM067 esv2376333 1 13522012 13522371 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4939438 M 1 0 1 "" NA18507 esv2744019 1 13522024 13522398 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6776929,essv6682824,essv6707262 M 96 0 3 "" SSM034,SSM041,SSM067 esv1009061 1 13522112 13522112 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570627 M 3 1 0 "" HuRef esv2658094 1 13527695 13527884 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5953067,essv6358787,essv5535262,essv6298750,essv5694770,essv6580857,essv5718507,essv6510999,essv5413303,essv6134546,essv5470649,essv6135002,essv5703516,essv6584145,essv5703927,essv6166006,essv5677481,essv6505563,essv5679858,essv6582753,essv5754235,essv6514553,essv5970214,essv6127554,essv5623698,essv6516581,essv6094221,essv6173582,essv5795599,essv6406195,essv5757224,essv6127900,essv5759534,essv6259387,essv5767133,essv6576788,essv6075772,essv6420430,essv6031404,essv6293672,essv5811810,essv6534412,essv5767193,essv6248492,essv6092130,essv6473802,essv5685828,essv6487837,essv5763687,essv6481467,essv5758327,essv6247692,essv5514861,essv6519944,essv6096620,essv6302531,essv5722966,essv6385230,essv5683130,essv6519506,essv5999398,essv6480899,essv5963405,essv6260719,essv6000834,essv6314133,essv5639876,essv6380526,essv5768748,essv6188162,essv5567034,essv6482388,essv5761386,essv6460990,essv6016920,essv6538902,essv5740411,essv6182792,essv5667103,essv6301748,essv5466717,essv6175858,essv5955605,essv6456993,essv5731451,essv6275652,essv5908486,essv6489783,essv5571023,essv6514724,essv6044956,essv6589873,essv5437298,essv6346310,essv6006928,essv6331160,essv5834404,essv6418213,essv5709203,essv6207898,essv5949197,essv6459433,essv5580293,essv6138316,essv5835677,essv6585751,essv5738045,essv6130641,essv5821522,essv6563386,essv5868716,essv6124796,essv5616040,essv6144375,essv5550129,essv6556159,essv5965042,essv6166899,essv5897617,essv6529094,essv5517554,essv6268292,essv5550077,essv6577413,essv5548836,essv6208914,essv5645527,essv6471375,essv6033408,essv6134227,essv5543408,essv6337280,essv5534797,essv6443922,essv5439999,essv6228340,essv5426478,essv6518239,essv5953739,essv6277010,essv5397079,essv6380935,essv5908267,essv6318609,essv5901771,essv6559901,essv5519714,essv6487241,essv5881093,essv6150035,essv6044589,essv6597866,essv5406423,essv6526690,essv6038810,essv6596432,essv5836452,essv6307927,essv5922194,essv6476298,essv5974643,essv6241175,essv5530771,essv6424190,essv5507613,essv6575837,essv5520251,essv6417259,essv5454528,essv6499862,essv5463492,essv6354370,essv5562956,essv6392379,essv6081436,essv6227837,essv5513619,essv6274427,essv5840187,essv6436623,essv5415706,essv6317269,essv6056130,essv6590058,essv5440187,essv6414725,essv5526966,essv6560168,essv6012974,essv6484334,essv5982563,essv6421536,essv5930142,essv6237551,essv5916737,essv6268057,essv5933301,essv6501009,essv6039474,essv6281794,essv5960653,essv6437222,essv6038528,essv6312358,essv5547019,essv6477733,essv5929006,essv6568499,essv5656503,essv5612708,essv5509575,essv5442693,essv5601070,essv5866379,essv6084609,essv5835282,essv5431792,essv5469047,essv5891494,essv5621734,essv5464387,essv5978187,essv6078499,essv5556836,essv5932411,essv5664819,essv5975828,essv5662908,essv5521790,essv5644291,essv5550463,essv5642618,essv5579923,essv5557860,essv5867077 M 1151 0 235 "" HG00103,HG00131,HG00133,HG00138,HG00140,HG00142,HG00154,HG00155,HG00182,HG00190,HG00233,HG00237,HG00246,HG00253,HG00259,HG00267,HG00268,HG00271,HG00276,HG00278,HG00281,HG00284,HG00285,HG00306,HG00309,HG00310,HG00318,HG00320,HG00324,HG00327,HG00334,HG00337,HG00339,HG00343,HG00346,HG00366,HG00368,HG00375,HG00418,HG00421,HG00422,HG00427,HG00428,HG00437,HG00442,HG00463,HG00464,HG00475,HG00476,HG00500,HG00513,HG00530,HG00531,HG00534,HG00537,HG00542,HG00543,HG00580,HG00581,HG00583,HG00589,HG00590,HG00592,HG00593,HG00607,HG00608,HG00613,HG00620,HG00638,HG00640,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00689,HG00690,HG00698,HG00699,HG00702,HG00704,HG00707,HG00731,HG01051,HG01052,HG01055,HG01070,HG01072,HG01080,HG01082,HG01083,HG01098,HG01101,HG01102,HG01107,HG01108,HG01134,HG01136,HG01137,HG01140,HG01149,HG01170,HG01173,HG01183,HG01253,HG01254,HG01334,HG01342,HG01350,HG01351,HG01356,HG01357,HG01360,HG01366,HG01378,HG01383,HG01384,HG01390,HG01462,HG01489,HG01515,HG01516,HG01518,HG01522,HG01551,NA06984,NA11994,NA12275,NA12340,NA18487,NA18534,NA18536,NA18543,NA18544,NA18548,NA18550,NA18553,NA18557,NA18559,NA18560,NA18561,NA18565,NA18574,NA18595,NA18596,NA18597,NA18599,NA18608,NA18610,NA18613,NA18622,NA18623,NA18633,NA18636,NA18856,NA18934,NA18956,NA18963,NA18982,NA18985,NA18986,NA18987,NA18990,NA18999,NA19010,NA19062,NA19064,NA19066,NA19067,NA19072,NA19074,NA19075,NA19076,NA19079,NA19080,NA19082,NA19088,NA19198,NA19223,NA19236,NA19248,NA19316,NA19317,NA19318,NA19327,NA19332,NA19372,NA19376,NA19381,NA19384,NA19390,NA19391,NA19396,NA19399,NA19401,NA19404,NA19428,NA19439,NA19443,NA19467,NA19625,NA19651,NA19652,NA19657,NA19658,NA19661,NA19663,NA19682,NA19685,NA19717,NA19726,NA19758,NA19774,NA19782,NA19786,NA19835,NA19901,NA19909,NA19917,NA19921,NA20276,NA20299,NA20314,NA20346,NA20503,NA20755,NA20760,NA20771,NA20818 esv2676801 1 13556973 13558010 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5398325 M 1151 0 1 "" NA19440 nsv545567 1 13558784 14026576 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710253 M 17421 1 0 "" esv2744031 1 13567565 13568410 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933301,essv6972337,essv6764158,essv6666891,essv6954736,essv6863955,essv6748320,essv6733479,essv6816578,essv6853234,essv6761850,essv6668946,essv6735975 M 96 0 13 "" SSM008,SSM021,SSM026,SSM029,SSM030,SSM031,SSM049,SSM050,SSM062,SSM063,SSM078,SSM087,SSM089 esv2417844 1 13567822 13568273 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4564737 M 1 0 1 "" NA18507 esv2744042 1 13567920 13568105 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954736,essv6863955,essv6816578,essv6853234,essv6668946 M 96 0 5 "" SSM026,SSM031,SSM078,SSM087,SSM089 esv2744053 1 13568004 13568079 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6954736,essv6863955,essv6668946 M 96 0 3 "" SSM026,SSM031,SSM089 nsv955038 1 13568035 13568219 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000481 M 1 0 1 "" BILGI_BIOE nsv460483 1 13577220 13590502 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537046 M 1557 0 1 "" 1780854159_A nsv545568 1 13577220 13590502 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173768 M 17421 0 1 "" 1780854159_A esv2744064 1 13604917 13605603 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6836183,essv6780864,essv6793280,essv6954737,essv6921713,essv6950548,essv6913997,essv6797446,essv6916662,essv6692757,essv6784991,essv6871711 M 96 0 12 "" SSM003,SSM016,SSM018,SSM025,SSM026,SSM037,SSM068,SSM069,SSM071,SSM072,SSM083,SSM091 esv3372731 1 13613523 13613538 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898631,essv8898632,essv8898638,essv8898637,essv8898635,essv8898630,essv8898633,essv8898634 M 185 8 0 "" NA18499,NA18501,NA18504,NA18505,NA18523,NA18856,NA19116,NA19257 esv3306243 1 13613524 13613525 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7761514,essv7760282,essv7740627,essv7750527,essv7749286,essv7760129,essv7754869,essv7752856 M 185 8 0 "" NA18499,NA18501,NA18504,NA18505,NA18523,NA18856,NA19116,NA19257 nsv3076 1 13627698 13658039 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv474 M 9 1 0 "" NA19240 nsv528139 1 13646755 13662732 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704685 M 2026 0 1 "" esv1349671 1 13658424 13658424 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4353969 M 2 1 0 "" HuRef nsv523568 1 13665574 13678128 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699350 M 2026 0 1 "" nsv3187 1 13665844 13711151 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7852 M 9 0 1 "" NA12156 esv2744075 1 13673189 13673639 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6679164 M 96 0 1 "" SSM033 nsv954813 1 13700006 13727105 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003086 M 1 1 0 "" BILGI_BIOE nsv474268 1 13750448 13750448 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012404 M 9 1 0 "" NA18507 esv2744086 1 13806064 13806440 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6714240 M 96 0 1 "" SSM043 nsv473350 1 13807404 13807404 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018587 M 9 1 0 "" NA19129 esv22539 1 13836545 13840521 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19106,esv16966 M 40 0 10 "" NA18505,NA18511,NA18517,NA18858,NA18907,NA18909,NA19099,NA19147,NA19225,NA19257 esv2660771 1 13836598 13840507 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6302125,essv5614058,essv6208975,essv5913446,essv6586520,essv5601272,essv6414672,essv5638982,essv6546952,essv5712320,essv6563699,essv6143653,essv6475055,essv5660168,essv6334563,essv6100642,essv6241574,essv6150516,essv6499202,essv5947056,essv6326609,essv5688053,essv6289637,essv5653858,essv6556082,essv5561509,essv6276590,essv6064476,essv6569919,essv5508810,essv6479979,essv5837003,essv6344862,essv5421703,essv6591425,essv5738996,essv5652186,essv5850685,essv6112891,essv5663105,essv6030971,essv6101699,essv6007775,essv5456701,essv6131673,essv5881645,essv5638046,essv5446129,essv5617103,essv6057318,essv5878578,essv6113322,essv6198786,essv5470781 M 1151 0 54 "" HG01188,HG01197,HG01551,NA18486,NA18487,NA18501,NA18505,NA18511,NA18517,NA18858,NA18871,NA18907,NA19092,NA19093,NA19099,NA19107,NA19130,NA19137,NA19147,NA19171,NA19225,NA19257,NA19316,NA19318,NA19347,NA19373,NA19374,NA19381,NA19382,NA19383,NA19390,NA19391,NA19394,NA19403,NA19431,NA19437,NA19440,NA19443,NA19444,NA19449,NA19452,NA19453,NA19456,NA19462,NA19469,NA19470,NA19473,NA19703,NA19707,NA19712,NA19916,NA19982,NA20126,NA20287 nsv508007 1 13858426 13864426 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621465,nssv618491 M 4 0 0 "" CHM,NA15510 nsv516549 1 13881993 13882841 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv690011,nssv669085 M 2026 0 2 "" nsv516435 1 13957965 13959969 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv683301,nssv681150,nssv668340 M 2026 0 3 "" esv35099 1 13968110 14043873 CNV gain Pinto_et_al_2007 17911159 SNP array essv6979949,essv6986978 M 771 2 0 "" NA18863 esv24677 1 13968824 13969332 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16259 M 40 0 1 "" NA19257 esv2758923 1 13978587 14045905 CNV gain Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756836 M 270 2 0 "" NA18861,NA18863 esv27027 1 13985114 14045091 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13313 M 40 1 0 "" NA18861 esv2764228 1 13986779 14044262 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005007,essv7005008,essv7005006 M 1109 3 0 "" RW_0186,RW_0292,RW_0330 nsv545569 1 13986985 14044642 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710254 M 17421 1 0 "" nsv524444 1 13986985 14044680 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv700376 M 2026 1 0 "" nsv517840 1 14005445 14011349 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695245 M 2026 0 1 "" esv1011257 1 14014339 14023051 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563991 M 3 0 1 "" HuRef esv2573663 1 14109597 14112738 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5360365 M 1 0 1 "" NA18507 nsv819952 1 14109598 14112335 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419473 M 2 0 1 "" AK1 nsv829514 1 14109766 14110269 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431794 M 31 0 1 "" AK20 esv3305958 1 14109813 14109814 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7743378,essv7756760,essv7742581,essv7757903,essv7762098,essv7762379,essv7753864,essv7745613,essv7752181,essv7757610,essv7760986,essv7749958,essv7762927,essv7746231,essv7752332,essv7742010,essv7746996,essv7756960,essv7746649,essv7756116,essv7754514,essv7748195,essv7758820,essv7749458,essv7742692,essv7756467,essv7761199,essv7740711,essv7740359,essv7757452,essv7747825,essv7751546,essv7749698,essv7741926,essv7753507,essv7747376,essv7740898,essv7759328,essv7753211,essv7744194,essv7750960,essv7756552,essv7751856,essv7744901,essv7748233,essv7742210,essv7745094,essv7758154,essv7758997,essv7759946 M 185 50 0 "" NA06986,NA07000,NA07051,NA11920,NA11995,NA12043,NA12249,NA12750,NA12776,NA18501,NA18507,NA18508,NA18510,NA18516,NA18519,NA18522,NA18526,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18605,NA18608,NA18638,NA18870,NA18912,NA18940,NA18951,NA18960,NA18964,NA19005,NA19093,NA19099,NA19114,NA19129,NA19137,NA19138,NA19225 esv3338675 1 14109813 14109821 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898690,essv8898660,essv8898645,essv8898661,essv8898653,essv8898691,essv8898657,essv8898682,essv8898671,essv8898654,essv8898675,essv8898674,essv8898666,essv8898678,essv8898640,essv8898642,essv8898672,essv8898648,essv8898694,essv8898684,essv8898668,essv8898689,essv8898651,essv8898663,essv8898662,essv8898685,essv8898688,essv8898650,essv8898644,essv8898687,essv8898693,essv8898673,essv8898683,essv8898676,essv8898659,essv8898649,essv8898646,essv8898665,essv8898679,essv8898652,essv8898667,essv8898664,essv8898641,essv8898686,essv8898677,essv8898680,essv8898639,essv8898655,essv8898656,essv8898643 M 185 50 0 "" NA06986,NA07000,NA07051,NA11920,NA11995,NA12043,NA12249,NA12750,NA12776,NA18501,NA18507,NA18508,NA18510,NA18516,NA18519,NA18522,NA18526,NA18542,NA18545,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18564,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18605,NA18608,NA18638,NA18870,NA18912,NA18940,NA18951,NA18960,NA18964,NA19005,NA19093,NA19099,NA19114,NA19129,NA19137,NA19138,NA19225 esv22693 1 14109816 14112453 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17238 M 40 0 21 "" NA11931,NA12044,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA15510,NA18505,NA18508,NA18511,NA18523,NA18858,NA18861,NA19099,NA19114,NA19129,NA19147,NA19225,NA19240 esv2744097 1 14109826 14112438 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6828995,essv6889005,essv6836184,essv6801615,essv6776930,essv6839968,essv6843821,essv6689256,essv6821179,essv6813165,essv6816698,essv6874701,essv6780865,essv6686151,essv6880417,essv6832594,essv6933302,essv6843881,essv6972338,essv6675196,essv6720819,essv6810337,essv6793281,essv6703861,essv6722003,essv6910038,essv6695643,essv6917422,essv6666892,essv6921714,essv6759039,essv6913998,essv6859186,essv6863956,essv6898609,essv6804400,essv6738807,essv6707263,essv6885981,essv6748331,essv6876765,essv6868708,essv6902527,essv6961548,essv6753493,essv6742137,essv6950196,essv6941777,essv6895845,essv6733481,essv6733480,essv6925687,essv6816579,essv6801043,essv6929056,essv6710577,essv6692758,essv6753494,essv6761852,essv6761851,essv6784565,essv6807373,essv6946492,essv6967921,essv6744929,essv6766535,essv6892316,essv6750593,essv6668947,essv6750594,essv6847013,essv6877663,essv6906097,essv6714241,essv6669199 M 96 0 71 "" SSM001,SSM002,SSM004,SSM005,SSM006,SSM008,SSM009,SSM010,SSM011,SSM012,SSM013,SSM014,SSM015,SSM016,SSM017,SSM018,SSM019,SSM020,SSM021,SSM023,SSM024,SSM027,SSM028,SSM029,SSM030,SSM031,SSM032,SSM035,SSM036,SSM037,SSM040,SSM041,SSM042,SSM043,SSM045,SSM049,SSM052,SSM053,SSM055,SSM057,SSM058,SSM061,SSM062,SSM064,SSM067,SSM068,SSM071,SSM073,SSM074,SSM075,SSM076,SSM077,SSM078,SSM079,SSM081,SSM082,SSM083,SSM084,SSM085,SSM086,SSM088,SSM089,SSM090,SSM092,SSM093,SSM094,SSM096,SSM097,SSM098,SSM099,SSM100 nsv957838 1 14109835 14111761 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005023 M 1 0 1 "" BILGI_BIOE esv2658479 1 14109855 14110160 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5402829,essv6471082,essv5634429,essv6324840,essv5803579,essv6447746,essv5743797,essv6375450,essv5766995,essv6383543,essv5788800,essv6162362,essv5937865,essv6200454,essv5977740,essv6187056,essv5911634,essv6219656,essv5480350,essv6568162,essv5791774,essv6195063,essv5989088,essv6299061,essv5570863,essv6234041,essv5866333,essv6429595,essv6121819,essv6227268,essv5822025,essv6169630,essv5818285,essv6569696,essv5605065,essv6312989,essv5700773,essv6533618,essv5950080,essv6420999,essv5947559,essv6556703,essv5895722,essv6411996,essv5733027,essv6205033,essv5440648,essv6471093,essv5826427,essv6298142,essv5845804,essv6309510,essv5833452,essv6222260,essv5766762,essv6254672,essv5901044,essv6560736,essv5778591,essv6527660,essv6127919,essv6525083,essv5648290,essv6562081,essv5783801,essv6530875,essv5609122,essv6490811,essv5778753,essv6270435,essv5857507,essv6341985,essv5740871,essv6238973,essv6081899,essv6222617,essv5821351,essv6537752,essv5539135,essv6510130,essv5944852,essv6456260,essv5411858,essv6566127,essv5410477,essv6399702,essv5787782,essv6400265,essv5774428,essv6316387,essv5986758,essv6451479,essv6068869,essv6243342,essv5953941,essv6396525,essv5642231,essv6152627,essv6066151,essv6470726,essv5686441,essv6576276,essv5697602,essv6526881,essv6133182,essv6196591,essv6042618,essv6304156,essv5743060,essv6243941,essv5873024,essv6585410,essv6051386,essv6263273,essv5594809,essv6392349,essv6078004,essv6395281,essv5667274,essv6413435,essv5890461,essv6494179,essv5671241,essv6269536,essv5408238,essv6539454,essv5441612,essv6569823,essv5954940,essv6200355,essv5920895,essv6551917,essv5836930,essv6236333,essv5663418,essv6429555,essv5422561,essv6456436,essv5674417,essv6494587,essv6130400,essv6546864,essv5876554,essv6282232,essv5574834,essv6445130,essv6014941,essv6451392,essv6074839,essv6560356,essv5425515,essv6266409,essv5646365,essv6532518,essv6011320,essv6278125,essv5870663,essv6136496,essv5861776,essv6298757,essv5900011,essv6574742,essv5942448,essv6319680,essv5471952,essv6441822,essv6111630,essv6398590,essv5441135,essv6436074,essv5915025,essv6387646,essv6002018,essv6371528,essv5895329,essv5566189,essv6113401,essv5510542,essv5646958,essv5988488,essv5969289,essv5443866,essv5446364,essv5467583,essv5628879,essv5989010,essv5499825,essv5579336,essv6104375,essv5557218,essv5639386,essv5442176,essv5946054,essv6049645,essv5407549,essv5463465,essv6127284,essv5506637,essv5935022,essv5929340,essv5864266,essv5459732,essv5611219,essv5602075,essv5513985,essv5658660,essv6081586,essv5964388 M 1151 0 208 "" HG00106,HG00116,HG00142,HG00160,HG00273,HG00311,HG00334,HG00369,HG00372,HG00373,HG00427,HG00551,HG00554,HG00578,HG00641,HG00732,HG00737,HG01047,HG01055,HG01061,HG01067,HG01069,HG01124,HG01191,HG01251,HG01342,HG01377,HG01462,HG01492,HG01498,NA06986,NA07000,NA11881,NA11931,NA11995,NA12043,NA12044,NA12144,NA12154,NA12155,NA12249,NA12286,NA12348,NA12749,NA12750,NA12775,NA12777,NA12778,NA12828,NA12830,NA12889,NA12890,NA18486,NA18501,NA18505,NA18511,NA18523,NA18526,NA18536,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18561,NA18563,NA18567,NA18570,NA18573,NA18576,NA18577,NA18579,NA18592,NA18603,NA18610,NA18617,NA18622,NA18628,NA18636,NA18638,NA18861,NA18867,NA18870,NA18874,NA18940,NA18942,NA18947,NA18949,NA18950,NA18953,NA18956,NA18959,NA18960,NA18965,NA18968,NA18972,NA18973,NA18975,NA18976,NA18977,NA18986,NA18987,NA18988,NA18991,NA19000,NA19005,NA19009,NA19054,NA19062,NA19064,NA19065,NA19072,NA19079,NA19081,NA19084,NA19087,NA19088,NA19098,NA19099,NA19114,NA19116,NA19119,NA19129,NA19137,NA19138,NA19147,NA19153,NA19189,NA19210,NA19225,NA19238,NA19240,NA19248,NA19316,NA19318,NA19327,NA19332,NA19350,NA19374,NA19376,NA19381,NA19397,NA19403,NA19428,NA19467,NA19469,NA19648,NA19651,NA19654,NA19655,NA19660,NA19661,NA19664,NA19679,NA19681,NA19682,NA19684,NA19685,NA19717,NA19722,NA19725,NA19726,NA19732,NA19746,NA19747,NA19749,NA19750,NA19755,NA19759,NA19770,NA19771,NA19776,NA19780,NA19782,NA19785,NA19788,NA19789,NA19818,NA19835,NA19900,NA19920,NA19921,NA20282,NA20340,NA20502,NA20505,NA20506,NA20518,NA20522,NA20524,NA20534,NA20539,NA20542,NA20544,NA20585,NA20586,NA20753,NA20766,NA20772,NA20773,NA20783,NA20786,NA20805,NA20811,NA20812,NA20818,NA20828 dgv142n54 1 14109873 14111718 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545570,nsv545571 M 17421 0 2 "" dgv143n54 1 14109873 14112402 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545573,nsv545572,nsv545575,nsv545574 M 17421 0 14 "" esv6543 1 14110343 14112684 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28984 M 1 0 0 "" dgv144n54 1 14110466 14112402 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545581,nsv545580,nsv545579,nsv545578,nsv545577,nsv545576,nsv545582 M 17421 0 212 "" esv3429 1 14110545 14112533 CNV loss Wang_et_al_2008 18987735 Sequencing essv25870 M 1 0 1 "" YH dgv18n67 1 14110554 14111619 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv829525,nsv829537 M 31 0 2 "" NA18547,NA18949 nsv829548 1 14110554 14112309 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434158,nssv1440119,nssv1423978,nssv1423109,nssv1422359,nssv1437928,nssv1426373,nssv1432008,nssv1431058,nssv1433411,nssv1423945,nssv1436328,nssv1430332,nssv1423396,nssv1428816,nssv1440802,nssv1432529,nssv1434861,nssv1421444,nssv1431795 M 31 0 20 "" AK12,AK16,AK18,AK20,AK6,NA18526,NA18542,NA18552,NA18564,NA18570,NA18582,NA18592,NA18942,NA18947,NA18951,NA18968,NA18969,NA18972,NA18997,NA18999 esv2677400 1 14111017 14111221 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6029052,essv6026122,essv5978131,essv6122429,essv6399957,essv5411800,essv5841214,essv5938624,essv5651965,essv6347817,essv5557097,essv5631438,essv5442038,essv6589918,essv6570764,essv6462959,essv6258105,essv5628727,essv5708496,essv6417617,essv5810404,essv6197434,essv5816645,essv6389098,essv6245720,essv5833316,essv5624834,essv6407325,essv6365053,essv5963942,essv5680499,essv6370951,essv5715356,essv6561431,essv5826134,essv5796252,essv5615572,essv5814014,essv6061655,essv6049734,essv6219991,essv5628747,essv6317779,essv5550601,essv6036512,essv6388711,essv5676464,essv6140255,essv6286874,essv5620170,essv6445864,essv6177462,essv6166730,essv6503483,essv6314106,essv5934737,essv5761148,essv6043143,essv5645927,essv5707098,essv6430667,essv6276064,essv6254369,essv6367040,essv6542661,essv6487794,essv5778779,essv6384998,essv5737062,essv6168192,essv6551479,essv6508555,essv5856589,essv5698631,essv6479751,essv6275858,essv6183618,essv6164033,essv6403371,essv6224472,essv5878549,essv5535280,essv5716197,essv5649489,essv5843711,essv5809894,essv5778389,essv5685867,essv6472226,essv6259589,essv6342060,essv6442110,essv6016525,essv5757322,essv6140547,essv6484428,essv5483604,essv5671721,essv6122453,essv6508194,essv6451058,essv5774263,essv6587727,essv6152393,essv6086784,essv6405232,essv6570147,essv5586169,essv5538382,essv6578137,essv6110530,essv6431926,essv5498732,essv5710140,essv5851208,essv5929267,essv5794770,essv5640009,essv5731341,essv5888222,essv6106944,essv5676907,essv5819115,essv5703494,essv5427397,essv6059496,essv5585364,essv6206486,essv5710074,essv6222395,essv5402871,essv5848759,essv5675346,essv5625772,essv5730999,essv5699817,essv6245793,essv5492739,essv6567561,essv6495621,essv5631451,essv5965364,essv5746743,essv6171076,essv6362488,essv5941385,essv5766320,essv5429233,essv6045960,essv5713706,essv5800934,essv6191892,essv5682403,essv6191346,essv6310608,essv5763813,essv5838917,essv5682418,essv6363755,essv6530876,essv5750239,essv6456208,essv5915475,essv6151162,essv5726413,essv5942437,essv6359458,essv6021772,essv5797254,essv5743748,essv6568615,essv6086855,essv5680166,essv5731030,essv6255202,essv5402373,essv5692977,essv6498960,essv5884032,essv6464349,essv6169547,essv6481196,essv5434603,essv6176099,essv5786310,essv6323428,essv6275862,essv6556804,essv5772277,essv5713827,essv5499052,essv5892108,essv6113450,essv6435412,essv5771723,essv5927777,essv6321031,essv5485977,essv5802912,essv6253317,essv5461283,essv5780626,essv6325102,essv5683122,essv5515663,essv5644202,essv6108664,essv5677972,essv5702276,essv5569084,essv5822928,essv5829006,essv6088386,essv6313188,essv6118078,essv5726426,essv5682533,essv6015787,essv5701932,essv6264265,essv5687679,essv5619174,essv5797738,essv5779009,essv5704119,essv5738170,essv5695769,essv6296696,essv5834649,essv6127682,essv6320598,essv6299587,essv5412839,essv5698356,essv5405056,essv6457005,essv5418688,essv6538977,essv5400492,essv6592622,essv6220751,essv6160494,essv5472482,essv5600708,essv6367282,essv6459838,essv5893532,essv5467495,essv5640444,essv6164760,essv6199662,essv6577593,essv5882630,essv6369856,essv6356682,essv5440330,essv5837895,essv5508803,essv5520162,essv6423008,essv6112750,essv6554543,essv5548161,essv6450142,essv5899652,essv6130781,essv6271796,essv5974397,essv5408994,essv5878923,essv6412982,essv6248143,essv6434686,essv5985115,essv5981021,essv6081638,essv6313002,essv5989465,essv5655773,essv5846540,essv6143735,essv6298256,essv6508619,essv6495051,essv6470357,essv5970446,essv5853299,essv6056942,essv6339190,essv5437595,essv6517718,essv5415353,essv6406985,essv6099485,essv6039834,essv5502621,essv6104278,essv6394135,essv5861392,essv5979248,essv5874531,essv6193204,essv6424159,essv5576794,essv5980797,essv5915192,essv6319531,essv5644506,essv6326244,essv5979272,essv6013089,essv6231083,essv6369046,essv5547690,essv5479039,essv5963684,essv6325024,essv6207533,essv5518985,essv6019825,essv5448832,essv6143816,essv5486438,essv5900793,essv6473329,essv5937378,essv6491931,essv5556157,essv5598006,essv6343689,essv6090725,essv6408099,essv5521310,essv6307394,essv5620167,essv5647586,essv6439781,essv5604363,essv6499814,essv6292668,essv6077539,essv5961553,essv6050190,essv5630101,essv6544902,essv6346411,essv6542565,essv6322611,essv6101865,essv5840147,essv5517238,essv6528471,essv5899716,essv5959331,essv6308533,essv6036664,essv5397688,essv6529141,essv6595361,essv5891934,essv5448598,essv6037548,essv5496036,essv6159664,essv6090497,essv6333086,essv5906621,essv6306526,essv5635174,essv5956035,essv6006628,essv5881915,essv5974264,essv5587602,essv5596257,essv5514594,essv6252496,essv6102880,essv5458150,essv6356202,essv6033176,essv5906104,essv5464963,essv5506600,essv5761655,essv6208033,essv5623263,essv5628791,essv5876024,essv5524694,essv6232736,essv5500963,essv5441316,essv6436608,essv6034072,essv6050474,essv6479660,essv6276570,essv5395937,essv5942105,essv6055844,essv5461549,essv5553199,essv6053800,essv5502748,essv6441784,essv5434461,essv6363510,essv5560236,essv5861146,essv6028013,essv6197223,essv6342801,essv5524318,essv5471761,essv5904317,essv6573044,essv6274764,essv5398510,essv5420530,essv5709988,essv5674930,essv5443227,essv5939475,essv6268029,essv5908728,essv6478830,essv6271329,essv5552025,essv6275336,essv5564662,essv6029437,essv5857567,essv6295302,essv5437968,essv5414474,essv5595420,essv5568667,essv5839384,essv6100090,essv5629160,essv5442500,essv6065716,essv6082228,essv5409996,essv6242591,essv5930305,essv5458992,essv6259107,essv6544020,essv6544048,essv6214827,essv5586241,essv5839816,essv5543560,essv5515656,essv5631319,essv6383480,essv5993369,essv5939906,essv6149977,essv6107622,essv5585011,essv5604639,essv6150885,essv5410668,essv6468034,essv5931573,essv5955110,essv6259844,essv5526644,essv5466880,essv5495711,essv6019435,essv6110385,essv5644839,essv6519740,essv5892058,essv5564504,essv6000543,essv5530845,essv6003910,essv6390933,essv6146889,essv5618947,essv5571818,essv5820336,essv6183701,essv5851579,essv5652119,essv5915972,essv5990445,essv6391330,essv5405144,essv6313364,essv5667110,essv6471064,essv5856356,essv6066879,essv6040838,essv6216279,essv6355280,essv5547575,essv5576685,essv5519197,essv5607825,essv6421569,essv6350134 M 1151 0 508 "" HG00100,HG00106,HG00112,HG00114,HG00116,HG00119,HG00122,HG00125,HG00126,HG00131,HG00137,HG00140,HG00142,HG00151,HG00152,HG00154,HG00160,HG00177,HG00179,HG00182,HG00183,HG00185,HG00186,HG00188,HG00189,HG00190,HG00232,HG00237,HG00242,HG00245,HG00246,HG00247,HG00249,HG00253,HG00258,HG00260,HG00263,HG00266,HG00269,HG00270,HG00271,HG00272,HG00273,HG00278,HG00281,HG00282,HG00310,HG00311,HG00312,HG00319,HG00321,HG00324,HG00326,HG00329,HG00330,HG00334,HG00339,HG00357,HG00361,HG00369,HG00372,HG00373,HG00377,HG00403,HG00404,HG00419,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00537,HG00543,HG00553,HG00554,HG00556,HG00557,HG00559,HG00560,HG00566,HG00577,HG00578,HG00580,HG00581,HG00583,HG00584,HG00590,HG00593,HG00596,HG00607,HG00608,HG00611,HG00613,HG00614,HG00619,HG00620,HG00625,HG00628,HG00629,HG00635,HG00637,HG00641,HG00650,HG00651,HG00653,HG00654,HG00656,HG00662,HG00663,HG00671,HG00672,HG00683,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708,HG00732,HG00737,HG00740,HG01047,HG01051,HG01055,HG01061,HG01067,HG01069,HG01070,HG01073,HG01075,HG01079,HG01080,HG01097,HG01102,HG01107,HG01108,HG01113,HG01124,HG01125,HG01136,HG01168,HG01171,HG01176,HG01183,HG01190,HG01191,HG01198,HG01251,HG01334,HG01342,HG01350,HG01354,HG01357,HG01359,HG01366,HG01374,HG01375,HG01377,HG01384,HG01389,HG01437,HG01462,HG01489,HG01492,HG01494,HG01522,NA06984,NA06986,NA07000,NA07048,NA07051,NA10847,NA11920,NA11931,NA11933,NA11994,NA11995,NA12003,NA12043,NA12044,NA12058,NA12144,NA12154,NA12155,NA12249,NA12286,NA12342,NA12348,NA12383,NA12400,NA12489,NA12748,NA12750,NA12775,NA12777,NA12778,NA12830,NA12843,NA12889,NA12890,NA18486,NA18501,NA18508,NA18510,NA18511,NA18516,NA18519,NA18522,NA18523,NA18526,NA18532,NA18534,NA18536,NA18538,NA18539,NA18541,NA18542,NA18543,NA18544,NA18545,NA18546,NA18547,NA18549,NA18550,NA18552,NA18553,NA18555,NA18558,NA18559,NA18561,NA18562,NA18564,NA18565,NA18567,NA18570,NA18572,NA18573,NA18576,NA18577,NA18582,NA18592,NA18593,NA18595,NA18596,NA18597,NA18603,NA18605,NA18606,NA18608,NA18610,NA18611,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18621,NA18622,NA18623,NA18624,NA18626,NA18627,NA18628,NA18630,NA18633,NA18635,NA18636,NA18637,NA18638,NA18853,NA18858,NA18861,NA18867,NA18870,NA18874,NA18912,NA18934,NA18940,NA18942,NA18947,NA18949,NA18950,NA18951,NA18953,NA18956,NA18959,NA18960,NA18963,NA18964,NA18965,NA18973,NA18977,NA18982,NA18983,NA18985,NA18986,NA18987,NA18988,NA18999,NA19000,NA19004,NA19005,NA19007,NA19009,NA19010,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19059,NA19060,NA19062,NA19063,NA19064,NA19065,NA19067,NA19070,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19081,NA19082,NA19083,NA19084,NA19085,NA19087,NA19088,NA19093,NA19099,NA19114,NA19116,NA19129,NA19130,NA19137,NA19138,NA19147,NA19189,NA19197,NA19213,NA19223,NA19225,NA19235,NA19248,NA19256,NA19312,NA19313,NA19316,NA19332,NA19338,NA19347,NA19350,NA19360,NA19372,NA19373,NA19374,NA19375,NA19376,NA19377,NA19381,NA19391,NA19395,NA19396,NA19397,NA19398,NA19399,NA19403,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19438,NA19443,NA19445,NA19446,NA19449,NA19451,NA19452,NA19457,NA19462,NA19466,NA19467,NA19468,NA19469,NA19470,NA19474,NA19648,NA19651,NA19652,NA19654,NA19655,NA19660,NA19661,NA19664,NA19675,NA19679,NA19681,NA19682,NA19685,NA19704,NA19707,NA19711,NA19713,NA19722,NA19725,NA19726,NA19746,NA19749,NA19755,NA19776,NA19780,NA19782,NA19818,NA19819,NA19835,NA19900,NA19904,NA19909,NA19914,NA19916,NA19920,NA19921,NA19982,NA20317,NA20502,NA20504,NA20505,NA20506,NA20507,NA20508,NA20512,NA20513,NA20518,NA20519,NA20521,NA20522,NA20528,NA20529,NA20530,NA20534,NA20535,NA20542,NA20544,NA20581,NA20585,NA20586,NA20588,NA20589,NA20753,NA20754,NA20756,NA20758,NA20759,NA20760,NA20766,NA20768,NA20770,NA20771,NA20772,NA20773,NA20786,NA20792,NA20799,NA20804,NA20805,NA20806,NA20811,NA20812,NA20816,NA20818,NA20828 dgv145n54 1 14111064 14112547 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545584,nsv545583,nsv545585,nsv545586 M 17421 0 11 "" esv2744108 1 14128290 14128428 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6941778 M 96 0 1 "" SSM023 esv2764190 1 14129253 14138457 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005009,essv7005013,essv7005010,essv7005012,essv7005015,essv7005014 M 1109 0 6 "" RW_0018,RW_0042,RW_0067,RW_0142,RW_0189,RW_0518 esv3367782 1 14170733 14170733 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740936 M 185 1 0 "" NA19240 nsv528033 1 14214817 14219514 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704564 M 2026 0 1 "" esv2664939 1 14221560 14230597 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6179776 M 1151 0 1 "" NA12058 esv2663195 1 14234358 14237520 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5486359 M 1151 0 1 "" NA19076 esv2677279 1 14292726 14295946 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5825058,essv6171442,essv5983468 M 1151 0 3 "" NA19435,NA19445,NA19453 nsv460494 1 14350414 14377358 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537055 M 1557 0 1 "" 1780862466_A nsv545587 1 14350414 14377358 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173769 M 17421 0 1 "" 1780862466_A nsv520614 1 14351234 14352231 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697519 M 2026 0 1 "" nsv518697 1 14351234 14362212 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696148 M 2026 0 1 "" nsv833203 1 14352705 14394443 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1442874,nssv1442885,nssv1442896,nssv1442907,nssv1442918,nssv1442929,nssv1442940,nssv1442863,nssv1442840,nssv1442852 M 95 5 5 "" esv2664734 1 14404616 14408158 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5738570 M 1151 0 1 "" NA12761 esv2673563 1 14409289 14415763 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6532160 M 1151 0 1 "" NA18541 esv2617537 1 14412006 14413547 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5289167 M 1 0 1 "" NA18507 esv3360411 1 14492600 14493414 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652043 M 185 1 0 "" NA19240 nsv512719 1 14492679 14492729 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625344 M 1 1 0 "" 1 esv1086173 1 14514509 14514509 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4139423 M 2 1 0 "" HuRef nsv833314 1 14572659 14742380 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442951 M 95 0 1 "" nsv460506 1 14580718 14655424 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537067 M 1557 0 1 "" HGDP00554 nsv545588 1 14580718 14655424 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173770 M 17421 0 1 "" HGDP00554 nsv3298 1 14585811 14612990 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv7914 M 9 1 0 "" NA12156 nsv473059 1 14620773 14620773 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017325 M 9 1 0 "" NA19129 nsv470697 1 14633677 14718300 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547709 M 443 1 0 "" HGDP00890 esv2637393 1 14652086 14653065 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5269600 M 1 1 0 "" NA18507 esv1497348 1 14652512 14652512 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3929982 M 2 1 0 "" HuRef nsv476853 1 14700863 14700863 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020114 M 9 1 0 "" NA12878 nsv478373 1 14752166 14752166 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018566 M 9 1 0 "" NA18507 esv2670554 1 14763161 14765194 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5701194 M 1151 0 1 "" NA18536 nsv545589 1 14763271 14835854 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710494 M 17421 0 1 "" nsv475615 1 14768771 14768771 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013409 M 9 1 0 "" NA12878 nsv545590 1 14785431 14835854 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710495 M 17421 0 1 "" esv8986 1 14787056 14787255 CNV gain Ahn_et_al_2009 19470904 Sequencing essv31427 M 1 0 0 "" esv2744119 1 14793516 14794223 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6832595,essv6692759 M 96 0 2 "" SSM037,SSM082 esv1214811 1 14867967 14867967 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4234331 M 2 1 0 "" HuRef esv3348016 1 14867975 14867975 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701356 M 185 1 0 "" NA12878 dgv8e201 1 14872808 14873439 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2744153,esv2744130 M 96 0 23 "" SSM003,SSM012,SSM013,SSM017,SSM023,SSM025,SSM026,SSM028,SSM029,SSM036,SSM039,SSM041,SSM042,SSM047,SSM064,SSM067,SSM068,SSM070,SSM072,SSM079,SSM083,SSM086,SSM087 esv2744142 1 14872898 14873018 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972340 M 96 0 1 "" SSM029 esv2744164 1 14872982 14873137 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6707266 M 96 0 1 "" SSM041 esv2744175 1 14873079 14873238 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821180 M 96 0 1 "" SSM079 nsv545591 1 14880515 15130423 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710496 M 17421 0 1 "" esv2744186 1 14882157 14884723 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6876787 M 96 0 1 "" SSM012 nsv820102 1 14929766 14934832 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419679 M 2 1 0 "" AK1 esv23718 1 14948425 14953077 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11412 M 40 0 1 "" NA19099 nsv441681 1 14949988 14952800 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656586,nssv1656587,nssv1656585 M 270 0 3 "" NA18913,NA18914,NA19099 esv2744197 1 14958168 14958878 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6780868,essv6666893,essv6929057,essv6710579 M 96 0 4 "" SSM020,SSM030,SSM042,SSM068 esv2744208 1 14958291 14958452 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6710579 M 96 0 1 "" SSM042 esv2656721 1 14961812 14962081 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6577580,essv6013489,essv6108403 M 1151 0 3 "" HG01101,NA19657,NA19779 esv2761573 1 14962714 14990734 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv6994411 M 1109 1 0 "" SW_0857 esv2676425 1 15000017 15001135 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5959097,essv6543636,essv6286986,essv6113589,essv6064396 M 1151 0 5 "" NA18505,NA18874,NA19108,NA19190,NA19313 esv27978 1 15000179 15000799 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13462 M 40 0 1 "" NA19190 nsv520075 1 15014559 15014917 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697211 M 2026 0 1 "" nsv527648 1 15014559 15016598 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704119 M 2026 0 1 "" nsv517844 1 15014559 15017907 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695248 M 2026 0 1 "" nsv521566 1 15016598 15020867 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv698183 M 2026 1 0 "" nsv545592 1 15018440 15051191 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710497 M 17421 0 1 "" esv22036 1 15038471 15039126 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11732 M 40 0 1 "" NA12776 esv2744219 1 15038541 15039238 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6801616,essv6843832,essv6874702,essv6836186,essv6816710,essv6813167,essv6675197,essv6972341,essv6793282,essv6764159,essv6921715,essv6669210,essv6889006,essv6759040,essv6863957,essv6885982,essv6859188,essv6682825,essv6733482,essv6747774,essv6692760,essv6816580,essv6961549,essv6744930,essv6668948,essv6847015 M 96 0 26 "" SSM005,SSM010,SSM011,SSM018,SSM027,SSM029,SSM031,SSM032,SSM034,SSM037,SSM049,SSM055,SSM056,SSM061,SSM063,SSM071,SSM073,SSM077,SSM078,SSM083,SSM086,SSM088,SSM089,SSM092,SSM096,SSM097 esv1011013 1 15038793 15038902 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3577254 M 3 0 1 "" HuRef esv1748933 1 15038795 15038905 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3823225 M 2 0 1 "" HuRef esv2744230 1 15038829 15039067 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6801616,essv6843832,essv6836186,essv6813167,essv6972341,essv6675197,essv6793282,essv6885982,essv6889006,essv6759040,essv6863957,essv6682825,essv6859188,essv6961549,essv6692760,essv6816580,essv6744930,essv6668948,essv6847015 M 96 0 19 "" SSM011,SSM027,SSM029,SSM031,SSM032,SSM034,SSM037,SSM055,SSM061,SSM071,SSM073,SSM077,SSM078,SSM083,SSM086,SSM088,SSM089,SSM096,SSM097 esv2678969 1 15038842 15039007 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6417866,essv6069641,essv5676377,essv5808706,essv6229821,essv5753845,essv6534079,essv6410464,essv5397554,essv6569702,essv6121185,essv6556702,essv5737281,essv5828094,essv5687484,essv5760169,essv5713653,essv6255549,essv5676598,essv5723719,essv6406302,essv5825410,essv5540657,essv5717724,essv6199069,essv6185332,essv6266633,essv5872659,essv5714361,essv5776461,essv5943948,essv5554665,essv6041768,essv5512288,essv6484942,essv6166905,essv5653658,essv6008282,essv5667515,essv6462213,essv5589171,essv5452369,essv5915598,essv5996205,essv5604942,essv6570486,essv6220232,essv6267676,essv6263364,essv6300292,essv5895506,essv6053815,essv6127500,essv5562131,essv6565358,essv5572955,essv6160268,essv5443769,essv6323738,essv5638545,essv5633833,essv6189080 M 1151 0 62 "" HG00139,HG00154,HG00249,HG00252,HG00260,HG00261,HG00268,HG00276,HG00278,HG00280,HG00284,HG00310,HG00313,HG00315,HG00318,HG00319,HG00323,HG00336,HG00337,HG00353,HG00418,HG00419,HG00428,HG00436,HG00437,HG00442,HG00443,HG00449,HG00473,HG00475,HG00478,HG00479,HG00500,HG00512,HG00513,HG00525,HG00537,HG00557,HG00583,HG00662,HG00663,HG00684,HG00698,HG00699,HG00701,HG00707,HG01070,HG01072,HG01082,HG01334,NA18534,NA18543,NA18546,NA18602,NA18605,NA18606,NA18612,NA18613,NA18623,NA18624,NA18633,NA18636 esv1186245 1 15038943 15038943 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3944374 M 2 1 0 "" HuRef esv2744241 1 15048298 15049014 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6913999,essv6759041,essv6769512,essv6824979,essv6789147,essv6941780 M 96 0 6 "" SSM016,SSM023,SSM061,SSM065,SSM070,SSM080 esv2313486 1 15048527 15048939 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4985131 M 1 0 1 "" NA18507 esv2744253 1 15048607 15048808 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6913999,essv6789147,essv6769512,essv6941780 M 96 0 4 "" SSM016,SSM023,SSM065,SSM070 esv2744264 1 15048775 15048925 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6824979 M 96 0 1 "" SSM080 esv2744275 1 15049551 15050464 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6666894 M 96 0 1 "" SSM030 esv2744286 1 15063474 15064071 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6666895,essv6769513,essv6941781 M 96 0 3 "" SSM023,SSM030,SSM065 nsv833425 1 15083330 15291728 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1442963 M 95 1 0 "" nsv508913 1 15092390 15165461 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619772 M 4 1 0 "" NA10860 esv2618588 1 15110268 15110334 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5193142 M 1 0 1 "" NA18507 esv22618 1 15129647 15134512 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15067 M 40 0 1 "" NA18502 esv2664046 1 15160438 15164967 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6539898,essv6211506,essv5981893,essv5618394,essv5998459,essv6165781 M 1151 0 6 "" HG01108,HG01198,NA19102,NA19373,NA19466,NA20282 nsv437203 1 15160948 15163828 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467084 M 60 0 1 "" NA19103 esv2764256 1 15162689 15163790 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005020,essv7005018,essv7005019,essv7005016,essv7005017 M 1109 0 5 "" RW_0012,RW_0222,RW_0231,RW_0281,RW_0601 nsv441682 1 15162689 15163790 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656588,nssv1656591,nssv1656590,nssv1656589 M 270 0 4 "" NA19102,NA19103,NA19206,NA19208 nsv519926 1 15163321 15163388 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689561,nssv687857,nssv690383,nssv659518 M 2026 0 4 "" nsv159446 1 15174383 15184166 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178024 M 24 "" nsv460550 1 15192296 15224029 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537098 M 1557 1 0 "" HGDP00863 nsv545593 1 15192296 15224029 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173771 M 17421 1 0 "" HGDP00863 esv2750811 1 15203764 15224029 CNV gain Pinto_et_al_2007 17911159 SNP array essv6981606,essv6981605,essv6985613 M 771 3 0 "" BEC_304 esv2621292 1 15224493 15225494 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5251821 M 1 1 0 "" NA18507 esv2423211 1 15230736 15232651 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5345612 M 1 0 1 "" NA18507 esv2672360 1 15231316 15232060 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5755585,essv6467816,essv5828760,essv5590991,essv5817642,essv6551358,essv6554736,essv6179960,essv5545255,essv6019157 M 1151 0 10 "" NA19130,NA19383,NA19399,NA19428,NA19435,NA19444,NA19453,NA19701,NA19834,NA20291 esv28285 1 15249736 15251616 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15216 M 40 0 1 "" NA12749 esv27394 1 15254829 15255882 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14001 M 40 1 0 "" NA18861 nsv517234 1 15259117 15267170 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv678288,nssv654089,nssv669267,nssv691051 M 2026 4 0 "" esv2744297 1 15270958 15271248 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6937676 M 96 0 1 "" SSM022 esv2762133 1 15273311 15275540 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005021 M 1109 0 1 "" RW_0544 nsv472480 1 15276058 15276058 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014170 M 9 1 0 "" NA18555 esv2508152 1 15314163 15315054 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5282605 M 1 1 0 "" NA18507 nsv833536 1 15323505 15528830 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442974,nssv1442985 M 95 0 2 "" esv2671419 1 15330870 15332998 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6070034 M 1151 0 1 "" NA19703 nsv460561 1 15360563 15423721 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537108 M 1557 0 1 "" NINDS_60 nsv545594 1 15360563 15423721 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173772 M 17421 0 1 "" NINDS_60 nsv475629 1 15379300 15379300 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016316 M 9 1 0 "" NA12878 nsv478487 1 15384802 15384802 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014816 M 9 1 0 "" NA18507 esv2117572 1 15445826 15446158 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4687770 M 1 0 1 "" NA18507 esv2667593 1 15448236 15455272 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6506394 M 1151 0 1 "" HG01134 esv2744308 1 15455456 15475909 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6902529,essv6843843,essv6780869,essv6675199,essv6863958,essv6921716,essv6797448,essv6868711,essv6824980,essv6692761,essv6750595 M 96 0 11 "" SSM011,SSM013,SSM018,SSM032,SSM037,SSM057,SSM068,SSM072,SSM080,SSM089,SSM090 esv2761582 1 15457276 15475000 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6994522 M 1109 0 1 "" SW_1130 nsv945786 1 15463437 15466781 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754062,nssv1754099,nssv1754072,nssv1754106,nssv1754063,nssv1755519,nssv1754069,nssv1754081,nssv1755506,nssv1755490,nssv1754074,nssv1755491,nssv1754057,nssv1755505,nssv1755511,nssv1754097,nssv1755515,nssv1754082,nssv1754066,nssv1755487,nssv1754061,nssv1755484,nssv1754070,nssv1755517,nssv1754065,nssv1754084,nssv1755510,nssv1754104,nssv1754068,nssv1754086,nssv1755512,nssv1754105,nssv1754060,nssv1755513,nssv1754071,nssv1754101,nssv1754075,nssv1755486,nssv1754058,nssv1754100,nssv1755514,nssv1755482,nssv1755507,nssv1755497,nssv1754073,nssv1754080,nssv1754067,nssv1755520,nssv1755509,nssv1755503,nssv1754059,nssv1755521,nssv1755508,nssv1754092,nssv1754064,nssv1755489,nssv1755485,nssv1755498,nssv1754098,nssv1755523,nssv1755493,nssv1755504,nssv1754083,nssv1754087,nssv1754090,nssv1755494,nssv1754095,nssv1754103,nssv1754076,nssv1754094,nssv1755501,nssv1754089,nssv1754093,nssv1755481,nssv1755525,nssv1755516,nssv1754107,nssv1754091,nssv1754077,nssv1755522,nssv1755483,nssv1754096,nssv1755500,nssv1755492,nssv1754056,nssv1754079,nssv1755488,nssv1754085,nssv1755518,nssv1755495,nssv1755502,nssv1755499,nssv1755524,nssv1754078,nssv1755496,nssv1754088,nssv1754102 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv441683 1 15465929 15484726 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656594,nssv1656595,nssv1656593,nssv1656592 M 270 0 4 "" NA12865,NA12875,NA18959,NA18981 esv2744319 1 15468474 15488142 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6880418,essv6910041,essv6707267,essv6748342,essv6742138,essv6807374 M 96 0 6 "" SSM008,SSM015,SSM041,SSM053,SSM075,SSM094 nsv818056 1 15470313 15482377 CNV loss Wang_et_al_2007 17921354 SNP array nssv1415732,nssv1415731 M 112 0 2 "" NA12865,NA12875 nsv954814 1 15524306 15525805 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003097 M 1 0 1 "" BILGI_BIOE esv29612 1 15586647 15587117 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv18278 M 40 1 0 "" NA19240 dgv17e199 1 15594114 15610810 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2672627,esv2660595 M 1151 0 1 "" NA19834 esv2663683 1 15597451 15600871 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6384427,essv6190839,essv6404860,essv6046980 M 1151 0 4 "" NA19439,NA19443,NA19469,NA19470 nsv945787 1 15603957 15605267 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755545,nssv1755549,nssv1755527,nssv1755596,nssv1755539,nssv1755587,nssv1755533,nssv1755559,nssv1755532,nssv1755558,nssv1755608,nssv1755589,nssv1755542,nssv1755616,nssv1755541,nssv1755591,nssv1755605,nssv1755565,nssv1755607,nssv1755618,nssv1755609,nssv1755617,nssv1755535,nssv1755574,nssv1755611,nssv1755602,nssv1755603,nssv1755584,nssv1755531,nssv1755572,nssv1755540,nssv1755594,nssv1755604,nssv1755579,nssv1755538,nssv1755620,nssv1755536,nssv1755563,nssv1755528,nssv1755571,nssv1755537,nssv1755575,nssv1755529,nssv1755619,nssv1755612,nssv1755621,nssv1755544,nssv1755551,nssv1755543,nssv1755613,nssv1755606,nssv1755595,nssv1755534,nssv1755573,nssv1755530,nssv1755583,nssv1755562,nssv1755581,nssv1755597,nssv1755622,nssv1755610,nssv1755582,nssv1755569,nssv1755599,nssv1755615,nssv1755548,nssv1755590,nssv1755526,nssv1755567,nssv1755586,nssv1755568,nssv1755566,nssv1755588,nssv1755592,nssv1755576,nssv1755614,nssv1755564,nssv1755593,nssv1755556,nssv1755577,nssv1755554,nssv1755550,nssv1755560,nssv1755598,nssv1755570,nssv1755561,nssv1755601,nssv1755557,nssv1755585,nssv1755553,nssv1755552,nssv1755547,nssv1755580,nssv1755555,nssv1755578,nssv1755546,nssv1755600 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv471769 1 15606478 15611927 CNV loss Hinds_et_al_2006 16327809 Oligo aCGH,PCR nssv646050 M 95 "" esv2661096 1 15608596 15611731 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5802283,essv6487434,essv6566730,essv6248093 M 1151 0 4 "" NA18499,NA18510,NA19172,NA19235 esv3302757 1 15618162 15620550 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7733047 M 185 0 0 "" NA18501 esv2678818 1 15675004 15683322 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5804859,essv5600879 M 1151 0 2 "" HG01134,HG01357 nsv524044 1 15675093 15835341 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699908 M 2026 0 1 "" esv28978 1 15683049 15684895 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv21090 M 40 1 0 "" NA06985 nsv545595 1 15683361 15683999 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710498,nssv710499 M 17421 1 1 "" dgv146n54 1 15683361 15684264 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545597,nsv545596,nsv545603 M 17421 0 3 "" dgv147n54 1 15683361 15684581 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545599,nsv545598 M 17421 11 2 "" dgv148n54 1 15683361 15684843 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545600,nsv545601 M 17421 6 0 "" nsv545602 1 15683463 15684087 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710521 M 17421 0 1 "" dgv149n54 1 15683567 15684784 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545609,nsv545610,nsv545604,nsv545611 M 17421 0 5 "" nsv545605 1 15683620 15684330 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710524 M 17421 0 1 "" dgv150n54 1 15683620 15684843 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545608,nsv545607,nsv545606 M 17421 7 0 "" nsv545612 1 15683999 15684843 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710536 M 17421 1 0 "" nsv545613 1 15683999 15689289 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710537 M 17421 0 1 "" dgv151n54 1 15686162 15768821 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545616,nsv545615,nsv545614 M 17421 3 0 "" HGDP00130,HGDP00160,HGDP00163 dgv11n27 1 15689491 15768821 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460572,nsv460583 M 1557 2 0 "" HGDP00130,HGDP00160 esv2674903 1 15693141 15695675 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6211324 M 1151 0 1 "" HG00595 nsv954825 1 15698506 15753805 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003108 M 1 0 1 "" BILGI_BIOE nsv508925 1 15717096 15803573 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619773 M 4 1 0 "" NA10860 nsv545617 1 15721510 15770742 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173776 M 17421 0 1 "" 1780862275_A nsv460594 1 15749411 15799712 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537135 M 1557 0 1 "" NINDS_70 nsv545618 1 15749411 15799712 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173777 M 17421 0 1 "" NINDS_70 nsv527046 1 15760765 15784320 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703422 M 2026 0 1 "" nsv945788 1 15792862 15796022 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756098,nssv1754996,nssv1755637,nssv1755650,nssv1755028,nssv2568962,nssv1755624,nssv1755019,nssv1755631,nssv1756108,nssv1755630,nssv1755000,nssv1755636,nssv1755652,nssv1755629,nssv1755018,nssv1755642,nssv1754997,nssv1756094,nssv1754993,nssv1755638,nssv1755654,nssv1756095,nssv1755653,nssv1755030,nssv1754985,nssv1755632,nssv1755649,nssv1755639,nssv1754998,nssv1755640,nssv1755016,nssv1755635,nssv1755021,nssv1755628,nssv2568965,nssv1755029,nssv1755651,nssv1755031,nssv1755647,nssv1756093,nssv1754995,nssv1755625,nssv2568956,nssv1755634,nssv1755011,nssv1755627,nssv1754990,nssv1755633,nssv1754991,nssv1756097,nssv1756099,nssv1755641,nssv1755005,nssv1755626,nssv1755013,nssv1754989,nssv1755007,nssv1755012,nssv1755020,nssv1755643,nssv1755644,nssv1756102,nssv1755024,nssv1755017,nssv1755015,nssv1756106,nssv2568954,nssv1756096,nssv1755002,nssv1754986,nssv1755655,nssv2568957,nssv1755006,nssv1755009,nssv2568959,nssv1755027,nssv1756100,nssv2568960,nssv1755003,nssv1756107,nssv1756101,nssv2568968,nssv1755648,nssv1754994,nssv1756105,nssv1754999,nssv1754988,nssv1755025,nssv2568964,nssv2568950,nssv2568967,nssv1755004,nssv1755645,nssv1755646,nssv1755014,nssv1755008,nssv1755623,nssv1754984,nssv2568953,nssv1755010,nssv1755022,nssv1754987,nssv1755026,nssv1756103,nssv1755001,nssv2568958,nssv2568952,nssv2568963,nssv1755023,nssv2568961,nssv1756104,nssv2568951,nssv1754992 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv833647 1 15794042 15952334 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1442996 M 95 0 1 "" esv2744330 1 15798804 15798990 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6946493 M 96 0 1 "" SSM024 esv2758924 1 15800985 15828612 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756837 M 270 0 2 "" NA07019,NA12815 nsv545619 1 15802946 15834894 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710538 M 17421 0 1 "" esv2672537 1 15803087 15804935 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6227263,essv5798425,essv6264811,essv5847534,essv6410505,essv6340165,essv6253229,essv5751674,essv6452740,essv5493439,essv6344540,essv6343216,essv5888075,essv6315106,essv6381980,essv6036373,essv6256469,essv6439037,essv5872941 M 1151 0 19 "" HG00261,NA18873,NA18950,NA18959,NA18988,NA19004,NA19060,NA19092,NA19116,NA19130,NA19172,NA19236,NA19713,NA19716,NA19835,NA19900,NA19920,NA20582,NA20799 nsv3409 1 15809988 15852694 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8042 M 9 0 1 "" NA12156 nsv954836 1 15819006 15829105 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003119 M 1 0 1 "" BILGI_BIOE esv2677120 1 15819697 15822287 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5659106,essv5492044 M 1151 0 2 "" NA18616,NA18617 nsv511126 1 15822806 15835341 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626032 M 1 0 1 "" 1 dgv18e199 1 15823843 15830497 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2669666,esv2671254,esv2667258 M 1151 0 76 "" HG00553,HG00554,HG00640,HG00641,HG00732,HG00737,HG00740,HG01047,HG01051,HG01052,HG01055,HG01060,HG01069,HG01072,HG01079,HG01080,HG01082,HG01095,HG01097,HG01098,HG01101,HG01102,HG01107,HG01167,HG01168,HG01174,HG01176,HG01182,HG01187,HG01191,HG01197,HG01515,HG01516,HG01519,NA20502,NA20505,NA20506,NA20515,NA20516,NA20517,NA20519,NA20520,NA20522,NA20527,NA20530,NA20533,NA20535,NA20536,NA20537,NA20538,NA20540,NA20542,NA20582,NA20588,NA20589,NA20752,NA20753,NA20754,NA20755,NA20759,NA20770,NA20771,NA20772,NA20773,NA20774,NA20775,NA20778,NA20783,NA20786,NA20787,NA20796,NA20807,NA20809,NA20810,NA20811,NA20815 esv2763791 1 15825132 15828515 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv6995966,essv6994855,essv6995522,essv6995077,essv6994966,essv6995300,essv6994744,essv6996188,essv6994633,essv6995855,essv6995744,essv6995411,essv6995189,essv6996077,essv6995633 M 1109 0 15 "" SW_0008,SW_0009,SW_0158,SW_0173,SW_0215,SW_0255,SW_0634,SW_0691,SW_0847,SW_0888,SW_1038,SW_1126,SW_1148,SW_1171,SW_1355 nsv511677 1 15825275 15829303 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626315 M 1 0 1 "" 1 esv2744341 1 15825402 15828942 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6776934,essv6874703,essv6686152,essv6836188,essv6972342,essv6703862,essv6810338,essv6750596,essv6666896,essv6937677,essv6954739,essv6868712,essv6859190,essv6804401,essv6682826,essv6707268,essv6725848,essv6859189,essv6895846,essv6747775,essv6742139,essv6756547,essv6807377,essv6946494,essv6876798,essv6744933,essv6892317,essv6784576,essv6906098,essv6847016,essv6714242 M 96 0 30 "" SSM009,SSM012,SSM014,SSM022,SSM024,SSM026,SSM029,SSM030,SSM034,SSM035,SSM040,SSM041,SSM043,SSM046,SSM053,SSM055,SSM056,SSM057,SSM059,SSM067,SSM074,SSM075,SSM076,SSM083,SSM086,SSM088,SSM090,SSM092,SSM098,SSM099 esv2853347 1 15825427 15828862 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7122914 M 1 0 1 "" HuRef esv1010744 1 15825436 15831614 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564107 M 3 0 1 "" HuRef dgv19e199 1 15825440 15829043 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2666280,esv2663874,esv2658702 M 1151 0 310 "" HG00111,HG00112,HG00114,HG00116,HG00117,HG00119,HG00120,HG00122,HG00124,HG00125,HG00126,HG00127,HG00133,HG00142,HG00143,HG00148,HG00149,HG00151,HG00152,HG00154,HG00155,HG00156,HG00157,HG00158,HG00159,HG00160,HG00171,HG00173,HG00176,HG00180,HG00182,HG00185,HG00231,HG00233,HG00237,HG00239,HG00242,HG00244,HG00246,HG00247,HG00249,HG00250,HG00251,HG00253,HG00256,HG00257,HG00258,HG00261,HG00262,HG00263,HG00264,HG00265,HG00267,HG00268,HG00271,HG00272,HG00274,HG00277,HG00280,HG00281,HG00282,HG00285,HG00306,HG00309,HG00312,HG00323,HG00327,HG00328,HG00329,HG00334,HG00335,HG00336,HG00337,HG00342,HG00343,HG00345,HG00366,HG00367,HG00369,HG00373,HG00377,HG00478,HG00479,HG00501,HG00512,HG00524,HG00525,HG00553,HG00554,HG00559,HG00578,HG00580,HG00581,HG00607,HG00619,HG00635,HG00637,HG00640,HG00641,HG00656,HG00671,HG00701,HG00702,HG00707,HG00732,HG00737,HG00740,HG01047,HG01052,HG01055,HG01060,HG01066,HG01069,HG01072,HG01079,HG01080,HG01082,HG01095,HG01101,HG01107,HG01113,HG01125,HG01167,HG01174,HG01176,HG01187,HG01191,HG01250,HG01251,HG01334,HG01342,HG01351,HG01353,HG01356,HG01359,HG01360,HG01365,HG01374,HG01375,HG01377,HG01383,HG01389,HG01437,HG01441,HG01456,HG01461,HG01491,HG01492,HG01494,HG01495,HG01497,HG01498,HG01515,HG01518,NA06986,NA06989,NA07048,NA07056,NA07346,NA07357,NA11829,NA11830,NA11881,NA11894,NA11918,NA11920,NA11930,NA11931,NA11932,NA11933,NA11993,NA11994,NA11995,NA12003,NA12004,NA12043,NA12058,NA12144,NA12156,NA12249,NA12272,NA12273,NA12275,NA12286,NA12341,NA12342,NA12347,NA12400,NA12413,NA12414,NA12489,NA12716,NA12717,NA12749,NA12750,NA12751,NA12761,NA12763,NA12775,NA12776,NA12778,NA12813,NA12828,NA12830,NA12878,NA12889,NA12890,NA12891,NA18542,NA18544,NA18564,NA18599,NA18609,NA18615,NA18618,NA18627,NA18853,NA18868,NA18873,NA18874,NA18924,NA19311,NA19316,NA19360,NA19372,NA19376,NA19379,NA19385,NA19391,NA19393,NA19398,NA19429,NA19463,NA19648,NA19651,NA19654,NA19660,NA19663,NA19664,NA19670,NA19675,NA19678,NA19679,NA19682,NA19684,NA19685,NA19701,NA19704,NA19719,NA19720,NA19725,NA19726,NA19728,NA19729,NA19731,NA19732,NA19750,NA19756,NA19771,NA19774,NA19776,NA19783,NA19785,NA19786,NA19788,NA20126,NA20278,NA20296,NA20314,NA20332,NA20348,NA20502,NA20509,NA20512,NA20516,NA20519,NA20520,NA20530,NA20533,NA20536,NA20537,NA20540,NA20542,NA20582,NA20586,NA20588,NA20589,NA20753,NA20754,NA20759,NA20760,NA20766,NA20769,NA20770,NA20771,NA20774,NA20783,NA20792,NA20796,NA20797,NA20799,NA20800,NA20804,NA20807,NA20811,NA20813,NA20814,NA20815,NA20818,NA20826 nsv498663 1 15825448 15828938 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585393 M 9 0 1 "" nsv957836 1 15825459 15828895 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3004960 M 1 0 1 "" BILGI_BIOE esv29597 1 15825779 15829007 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17422 M 40 0 12 "" NA06985,NA11894,NA11931,NA11993,NA12004,NA12156,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510 nsv513982 1 15825782 15827462 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2853925,nssv2853876,nssv2853867,nssv2853835,nssv2853862,nssv2853938,nssv2853829,nssv2853883,nssv2853845,nssv2853888,nssv2853902,nssv2853837,nssv2853833,nssv2853927,nssv2853947,nssv2853875,nssv2853865,nssv2853961,nssv2853881,nssv2853910,nssv2853871,nssv2853931,nssv2853926,nssv2853928,nssv2853905,nssv2853934,nssv2853901,nssv2853864,nssv2853855,nssv2853924,nssv2853943,nssv2853861,nssv2853887,nssv2853844,nssv2853921,nssv2850678,nssv2853906,nssv2853950,nssv2850682,nssv2853896,nssv2853834,nssv2853859,nssv2853940,nssv2853953,nssv2853916,nssv2853830,nssv2853892,nssv2853854,nssv2853873,nssv2853946,nssv2850680,nssv2853870,nssv2853890,nssv2853856,nssv2853908,nssv2853857,nssv2853851,nssv2853932,nssv2853930,nssv2853847,nssv2853886,nssv2853893,nssv2853913,nssv2853909,nssv2853923,nssv2853877,nssv2853951,nssv2853958,nssv2853841,nssv2850676,nssv2853959,nssv2853831,nssv2853918,nssv2853894,nssv2853960,nssv2853878,nssv2853903,nssv2853939,nssv2853933,nssv2853945,nssv2853917,nssv2853842,nssv2853849,nssv2853868,nssv2853846,nssv2853839,nssv2853922,nssv2853836,nssv2853919,nssv2853869,nssv2853882,nssv2853956,nssv2850677,nssv2853948,nssv2853889,nssv2853898,nssv2853895,nssv2853904,nssv2853911,nssv2853872,nssv2853912,nssv2853907,nssv2853866,nssv2853891,nssv2853899,nssv2853879,nssv2853832,nssv2853884,nssv2853949,nssv2853885,nssv2853874,nssv2853838,nssv2853860,nssv2853936,nssv2853929,nssv2853957,nssv2853942,nssv2853944,nssv2853941,nssv2853850,nssv2853863,nssv2853840,nssv2853853,nssv2853954,nssv2853843,nssv2853897,nssv2853920,nssv2853952,nssv2853900,nssv2853848,nssv2853937,nssv2850679,nssv2853955,nssv2853935,nssv2853914,nssv2853880,nssv2853858,nssv2853852,nssv2850681,nssv2850675,nssv2853915 M 2366 0 141 "" NA06985,NA06986,NA06989,NA06991,NA07014,NA07019,NA07031,NA07034,NA07048,NA07056,NA07346,NA07348,NA07349,NA07357,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10850,NA10856,NA10857,NA10863,NA11829,NA11830,NA11832,NA11839,NA11840,NA11881,NA11882,NA11894,NA11918,NA11920,NA11930,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12058,NA12144,NA12156,NA12234,NA12249,NA12272,NA12273,NA12274,NA12275,NA12286,NA12336,NA12343,NA12347,NA12400,NA12414,NA12485,NA12489,NA12708,NA12716,NA12717,NA12740,NA12749,NA12750,NA12751,NA12753,NA12760,NA12761,NA12763,NA12766,NA12775,NA12776,NA12778,NA12802,NA12813,NA12814,NA12815,NA12817,NA12828,NA12830,NA12832,NA12842,NA12843,NA12872,NA12877,NA12878,NA12889,NA12890,NA12891,NA18498,NA18509,NA18542,NA18564,NA18609,NA18853,NA18854,NA18868,NA18869,NA18873,NA18874,NA18875,NA18924,NA18925,NA19098,NA19123,NA19150,NA19151,NA19171,NA19175,NA19177,NA19181,NA19183,NA21301,NA21302,NA21303,NA21344,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21400,NA21401,NA21454,NA21475,NA21477,NA21478,NA21479,NA21480,NA21489,NA21522,NA21583,NA21717,NA21718 nsv545620 1 15825802 15828449 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710586,nssv710604,nssv710715,nssv710559,nssv710671,nssv710668,nssv710718,nssv710599,nssv710741,nssv710596,nssv710591,nssv710708,nssv710761,nssv710721,nssv710567,nssv710574,nssv710672,nssv710773,nssv710645,nssv710728,nssv710764,nssv710579,nssv710629,nssv710571,nssv710778,nssv710573,nssv710696,nssv710656,nssv710760,nssv710561,nssv710686,nssv710794,nssv710747,nssv710772,nssv710654,nssv710719,nssv710688,nssv710628,nssv710637,nssv710716,nssv710563,nssv710676,nssv710757,nssv710543,nssv710647,nssv710776,nssv710636,nssv710774,nssv710620,nssv710770,nssv710682,nssv710575,nssv710735,nssv710750,nssv710598,nssv710566,nssv710701,nssv710683,nssv710621,nssv710609,nssv710576,nssv710542,nssv710560,nssv710581,nssv710765,nssv710569,nssv710551,nssv710602,nssv710548,nssv710754,nssv710572,nssv710597,nssv710784,nssv710700,nssv710687,nssv710638,nssv710578,nssv710775,nssv710611,nssv710684,nssv710705,nssv710663,nssv710618,nssv710545,nssv710652,nssv710788,nssv710739,nssv710732,nssv710677,nssv710706,nssv710570,nssv710624,nssv710562,nssv710556,nssv710789,nssv710595,nssv710658,nssv710666,nssv710653,nssv710594,nssv710749,nssv710601,nssv710632,nssv710634,nssv710752,nssv710582,nssv710607,nssv710627,nssv710755,nssv710726,nssv710744,nssv710655,nssv710593,nssv710783,nssv710679,nssv710767,nssv710798,nssv710780,nssv710584,nssv710557,nssv710657,nssv710587,nssv710690,nssv710678,nssv710592,nssv710790,nssv710758,nssv710785,nssv710717,nssv710608,nssv710697,nssv710674,nssv710711,nssv710555,nssv710746,nssv710729,nssv710703,nssv710659,nssv710781,nssv710742,nssv710552,nssv710606,nssv710564,nssv710644,nssv710642,nssv710541,nssv710664,nssv710740,nssv710695,nssv710549,nssv710554,nssv710623,nssv710649,nssv710670,nssv710685,nssv710782,nssv710673,nssv710793,nssv710651,nssv710665,nssv710662,nssv710762,nssv710641,nssv710771,nssv710590,nssv710693,nssv710639,nssv710585,nssv710539,nssv710650,nssv710709,nssv710580,nssv710791,nssv710714,nssv710605,nssv710704,nssv710547,nssv710692,nssv710725,nssv710734,nssv710577,nssv710583,nssv710689,nssv710724,nssv710669,nssv710763,nssv710615,nssv710553,nssv710796,nssv710751,nssv710546,nssv710640,nssv710603,nssv710723,nssv710733,nssv710759,nssv710779,nssv710766,nssv710646,nssv710648,nssv710614,nssv710792,nssv710769,nssv710720,nssv710568,nssv710630,nssv710722,nssv710675,nssv710626,nssv710617,nssv710727,nssv710667,nssv710756,nssv710730,nssv710731,nssv710612,nssv710681,nssv710753,nssv710710,nssv710643,nssv710660,nssv710544,nssv710600,nssv710540,nssv710619,nssv710748,nssv710698,nssv710795,nssv710712,nssv710707,nssv710699,nssv710737,nssv710616,nssv710680,nssv710661,nssv710702,nssv710589,nssv710797,nssv710787,nssv710743,nssv710565,nssv710613,nssv710713,nssv710558,nssv710635,nssv710786,nssv710610,nssv710550,nssv710631,nssv710745,nssv710625,nssv710588,nssv710633,nssv710622,nssv710691,nssv710768,nssv710694,nssv710736,nssv710777,nssv710738 M 17421 0 260 "" nsv945789 1 15825895 15828696 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756113,nssv1756139,nssv1756128,nssv1756141,nssv1756189,nssv1756184,nssv1756127,nssv1756148,nssv1756110,nssv1756196,nssv1756122,nssv1756159,nssv1756115,nssv1756174,nssv1756116,nssv1756181,nssv1756123,nssv1756179,nssv1756191,nssv1756182,nssv1756195,nssv1756136,nssv1756125,nssv1756135,nssv1756192,nssv1756156,nssv1756194,nssv1756183,nssv1756112,nssv1756163,nssv1756118,nssv1756158,nssv1756117,nssv1756151,nssv1756124,nssv1756143,nssv1756121,nssv1756130,nssv1756114,nssv1756149,nssv1756190,nssv1756171,nssv1756187,nssv1756198,nssv1756119,nssv1756145,nssv1756126,nssv1756133,nssv1756120,nssv1756137,nssv1756188,nssv1756140,nssv1756186,nssv1756129,nssv1756111,nssv1756160,nssv1756180,nssv1756172,nssv1756173,nssv1756153,nssv1756203,nssv1756185,nssv1756147,nssv1756146,nssv1756109,nssv1756162,nssv1756157,nssv1756150,nssv1756134,nssv1756177,nssv1756200,nssv1756131,nssv1756169,nssv1756144,nssv1756138,nssv1756197,nssv1756161,nssv1756175,nssv1756152,nssv1756193,nssv1756167,nssv1756165,nssv1756170,nssv1756155,nssv1756132,nssv1756178,nssv1756201,nssv1756164,nssv1756166,nssv1756168,nssv1756142,nssv1756176,nssv1756202,nssv1756154,nssv1756205,nssv1756204,nssv1756199 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv152n54 1 15825905 15827390 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545622,nsv545621 M 17421 0 2 "" esv2764241 1 15827002 15855150 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005029,essv7005030,essv7005028,essv7005024,essv7005023,essv7005027,essv7005026,essv7005025 M 1109 0 8 "" RW_0028,RW_0058,RW_0098,RW_0131,RW_0136,RW_0273,RW_0325,RW_0570 dgv153n54 1 15827003 15828449 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545623,nsv545625 M 17421 0 3 "" dgv154n54 1 15827003 15834894 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545626,nsv545624 M 17421 0 2 "" esv2668319 1 15859334 15866513 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6530617,essv6100111 M 1151 0 2 "" HG00654,NA18534 esv2744352 1 15859412 15866564 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6801154,essv6761854,essv6731930 M 96 0 3 "" SSM001,SSM002,SSM062 nsv829559 1 15859491 15866460 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422361,nssv1439448,nssv1428817 M 31 0 3 "" AK12,NA18537,NA18552 esv2665696 1 15859935 15860636 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6542681,essv5956490,essv5447900,essv5926085 M 1151 0 4 "" HG00525,HG00531,HG00654,NA19009 esv22591 1 15883781 15886967 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17906 M 40 1 0 "" NA12287 nsv508936 1 15915852 16181025 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619774,nssv619775 M 4 1 0 "" NA10860 nsv478397 1 15928427 15928427 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012377 M 9 1 0 "" NA18507 nsv954843 1 15931306 15953205 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003129 M 1 0 1 "" BILGI_BIOE nsv833758 1 15969028 16140519 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1443007,nssv1443018 M 95 1 1 "" nsv545627 1 16000927 16047835 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710806 M 17421 0 1 "" nsv517651 1 16005414 16054087 CNV gain+loss Shaikh_et_al_2009 19592680 SNP array nssv701339,nssv700288,nssv656190,nssv673015,nssv673768,nssv680788,nssv663351,nssv666809,nssv664299,nssv669916,nssv669004,nssv661818,nssv659185,nssv667590,nssv701973,nssv698988,nssv674154,nssv655929,nssv674326,nssv688461,nssv687387,nssv683426,nssv670058,nssv672518,nssv674672,nssv653562,nssv664812,nssv653845,nssv685627,nssv687919,nssv669108,nssv692238,nssv656487,nssv654197,nssv673550,nssv678289,nssv668525,nssv692440,nssv683268,nssv680689,nssv675618 M 2026 5 36 "" nsv520148 1 16005414 16139508 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697249 M 2026 0 1 "" nsv524045 1 16005414 16226277 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699909 M 2026 0 1 "" nsv954844 1 16013606 16077905 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003130 M 1 0 1 "" BILGI_BIOE dgv12n27 1 16013965 16041908 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460605,nsv460618 M 1557 0 2 "" HGDP00525,HGDP00971 nsv545628 1 16013965 16041908 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710807,nssv1173779,nssv1173778 M 17421 1 2 "" HGDP00525,HGDP00971 nsv460629 1 16013965 16054087 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537170 M 1557 1 0 "" HGDP01090 dgv155n54 1 16013965 16066862 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545629,nsv545633 M 17421 2 0 "" HGDP00923,HGDP01090 nsv470698 1 16013965 16070311 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547710 M 443 0 1 "" HGDP00661 esv2760188 1 16018169 16063907 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv6996411,essv6996300,essv6996744,essv6996522,essv6996633 M 1109 4 1 "" SW_0061,SW_0086,SW_0786,SW_1282,SW_1480 dgv13n27 1 16019962 16050336 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nsv460640,nsv460651 M 1557 2 0 "" HGDP00906,HGDP00941 dgv156n54 1 16019962 16050336 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545630,nsv545631,nsv545632 M 17421 3 0 "" HGDP00906,HGDP00934,HGDP00941 esv25815 1 16020447 16064388 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv17676,esv10646 M 40 8 0 "" NA12156,NA12489,NA12828,NA18508,NA18858,NA18861,NA18909,NA19108 esv2744364 1 16020642 16052735 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6828997,essv6828996,essv6743041,essv6776935,essv6821181,essv6718865,essv6874704,essv6843854,essv6972343,essv6780870,essv6836190,essv6718876,essv6836189,essv6675200,essv6750599,essv6793283,essv6714244,essv6910042,essv6801265,essv6950550,essv6917425,essv6917424,essv6754152,essv6937678,essv6764160,essv6921717,essv6914000,essv6961550,essv6725849,essv6718163,essv6892318,essv6883255,essv6729616,essv6748353,essv6895847,essv6950552,essv6769514,essv6824981,essv6747777,essv6925688,essv6710580,essv6816581,essv6839969,essv6784992,essv6784587,essv6669221,essv6756548,essv6946495,essv6967923,essv6906099,essv6871712 M 96 0 45 "" SSM001,SSM002,SSM005,SSM007,SSM008,SSM009,SSM011,SSM014,SSM015,SSM016,SSM017,SSM018,SSM019,SSM022,SSM024,SSM025,SSM027,SSM028,SSM029,SSM032,SSM042,SSM043,SSM044,SSM046,SSM047,SSM056,SSM057,SSM059,SSM063,SSM065,SSM067,SSM068,SSM069,SSM071,SSM078,SSM079,SSM080,SSM081,SSM083,SSM084,SSM091,SSM092,SSM095,SSM098,SSM099 dgv2n64 1 16021917 16041829 CNV gain Wang_et_al_2007 17921354 SNP array nsv818067,nsv818078 M 112 5 0 "" NA19143,NA19172,NA19173,NA19193,NA19194 nsv473735 1 16022759 16022759 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012638 M 9 1 0 "" NA19129 esv8597 1 16023217 16045402 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31038 M 1 0 0 "" esv2674711 1 16027986 16049783 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6534826,essv6073654,essv5945246,essv5449000 M 1151 0 4 "" HG00159,NA18557,NA18596,NA20533 esv2665318 1 16030950 16035997 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6577191,essv5868906,essv6423982,essv6079824,essv6564723,essv6096342,essv6443514,essv6155862,essv6458525,essv5986462,essv6444250,essv5548759,essv6510317,essv5689713,essv6565313,essv5559776,essv6514405,essv5907875,essv5721884,essv6274071,essv5477532,essv5524902,essv6264913,essv5959997,essv5620482,essv5778558,essv5721139,essv5728168,essv5800906,essv5620722,essv6260115,essv5738567,essv6300428,essv5832972,essv5813713,essv5761570,essv5671555,essv5907250,essv5957745,essv6112083,essv5893680,essv5970021,essv5422545,essv5484840,essv5429090,essv6340268,essv6048525,essv5483132,essv6116357,essv6292749,essv5994393,essv6378765,essv6282724,essv6357323,essv5595661,essv6206665,essv6035088,essv5957852,essv6065374,essv6137777,essv5937904,essv6126669,essv6139055 M 1151 0 63 "" HG00404,HG00418,HG00427,HG00428,HG00436,HG00442,HG00448,HG00449,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00533,HG00542,HG00543,HG00556,HG00557,HG00559,HG00560,HG00565,HG00566,HG00578,HG00580,HG00581,HG00583,HG00584,HG00590,HG00595,HG00596,HG00607,HG00608,HG00610,HG00611,HG00619,HG00620,HG00626,HG00628,HG00629,HG00634,HG00635,HG00654,HG00657,HG00662,HG00663,HG00672,HG00684,HG00689,HG00690,HG00692,HG00698,HG00699,HG00701,HG00704,HG00708 nsv829570 1 16032866 16077137 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426375 M 31 1 0 "" AK6 nsv545634 1 16033784 16061018 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710808 M 17421 1 0 "" nsv545635 1 16033992 16034386 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710834,nssv710831,nssv710812,nssv710811,nssv710814,nssv710826,nssv710817,nssv710820,nssv710815,nssv710809,nssv710821,nssv710813,nssv710822,nssv710830,nssv710816,nssv710837,nssv710818,nssv710836,nssv710835,nssv710832,nssv710833,nssv710810,nssv710824,nssv710828,nssv710823,nssv710829,nssv710819,nssv710825,nssv710827 M 17421 0 29 "" nsv545636 1 16034211 16034386 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710838 M 17421 0 1 "" esv2434454 1 16034630 16059012 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5273432 M 1 0 1 "" NA18507 nsv511678 1 16034933 16057635 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626316 M 1 0 1 "" 1 esv995840 1 16035595 16058849 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3574114 M 3 0 1 "" HuRef dgv9e201 1 16036069 16062660 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2740760,esv2742214,esv2741203,esv2741204,esv2742215,esv2742988,esv2741275,esv2742987,esv2742030,esv2742027,esv2741302,esv2740828,esv2742282,esv2742283,esv2740827,esv2742285,esv2742308,esv2743035,esv2740860,esv2742344,esv2742343,esv2741349,esv2741348,esv2740915,esv2743060,esv2742050,esv2742378,esv2742049,esv2742048,esv2741507,esv2740758,esv2742397,esv2742398,esv2741533,esv2741532,esv2742424,esv2742425,esv2742087,esv2741557,esv2741556,esv2742462,esv2741582,esv2741581,esv2742460,esv2743116,esv2742086,esv2742478,esv2742477,esv2741590,esv2740964,esv2742487,esv2742488,esv2740952,esv2741605,esv2740950,esv2742502,esv2743158,esv2741629,esv2741630,esv2740810,esv2742525,esv2743157,esv2740981,esv2743159,esv2742603,esv2743160,esv2741665,esv2741410,esv2742578,esv2742579,esv2741427,esv2741778,esv2741741,esv2741739,esv2741777,esv2742120,esv2742676,esv2742677,esv2742704,esv2743253,esv2741822,esv2741083,esv2741082,esv2741854,esv2741126,esv2742742,esv2742741,esv2741855,esv2743310,esv2741432,esv2743311,esv2742158,esv2741456,esv2742786,esv2742785,esv2744375,esv2742822,esv2742830,esv2741927,esv2742828,esv2741950,esv2742947,esv2742913,esv2742186,esv2741168,esv2742868,esv2742867,esv2741171,esv2742008 M 96 0 84 "" SSM001,SSM002,SSM003,SSM004,SSM005,SSM006,SSM007,SSM008,SSM009,SSM010,SSM011,SSM012,SSM013,SSM014,SSM015,SSM016,SSM017,SSM018,SSM019,SSM020,SSM021,SSM022,SSM023,SSM024,SSM025,SSM026,SSM027,SSM028,SSM029,SSM030,SSM031,SSM032,SSM033,SSM034,SSM036,SSM037,SSM038,SSM042,SSM043,SSM044,SSM045,SSM047,SSM049,SSM050,SSM052,SSM053,SSM055,SSM056,SSM057,SSM059,SSM061,SSM062,SSM063,SSM064,SSM065,SSM066,SSM067,SSM068,SSM069,SSM070,SSM071,SSM074,SSM076,SSM077,SSM078,SSM079,SSM080,SSM081,SSM082,SSM083,SSM084,SSM085,SSM086,SSM087,SSM088,SSM089,SSM090,SSM091,SSM092,SSM093,SSM094,SSM097,SSM098,SSM100 dgv1e19 1 16036506 16062816 CNV loss Ahn_et_al_2009 19470904 Sequencing esv5593,esv5890 M 1 0 0 "" nsv436443 1 16036766 16057860 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv466694 M 2 0 1 "" NA18505 dgv20e199 1 16037286 16062671 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2657098,esv2677387,esv2667784,esv2675551 M 1151 0 106 "" HG00100,HG00103,HG00149,HG00151,HG00171,HG00173,HG00174,HG00188,HG00265,HG00311,HG00326,HG00367,HG00377,HG00443,HG00531,HG00542,HG00565,HG00566,HG00590,HG00595,HG00611,HG00613,HG00620,HG00650,HG00656,HG00671,HG00732,HG00740,HG01066,HG01112,HG01136,HG01168,HG01250,HG01254,HG01390,HG01455,HG01456,HG01465,HG01488,HG01494,HG01518,HG01519,HG01521,NA11831,NA11832,NA18488,NA18550,NA18561,NA18567,NA18573,NA18574,NA18582,NA18614,NA18619,NA18620,NA18623,NA18625,NA18637,NA18940,NA18960,NA18963,NA18964,NA18977,NA18988,NA19002,NA19004,NA19010,NA19058,NA19064,NA19070,NA19072,NA19074,NA19078,NA19082,NA19083,NA19084,NA19235,NA19248,NA19360,NA19660,NA19661,NA19747,NA19758,NA19774,NA19779,NA19782,NA19783,NA19786,NA19819,NA20278,NA20289,NA20314,NA20334,NA20344,NA20348,NA20518,NA20522,NA20533,NA20760,NA20761,NA20770,NA20804,NA20807,NA20809,NA20818,NA20828 dgv157n54 1 16037430 16059273 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545637,nsv545639 M 17421 2 0 "" esv2764186 1 16037445 16052921 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005034,essv7005035,essv7005032,essv7005031 M 1109 2 2 "" RW_0158,RW_0213,RW_0578,RW_0623 esv32650 1 16037532 16063297 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv95958,essv93058,essv97715 M 51 3 0 "" 21863,22127,22278 nsv441684 1 16041636 16052836 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1656599,nssv1656596,nssv1656598,nssv1656597 M 270 4 0 "" NA10846,NA12144,NA18508,NA19159 nsv545638 1 16041829 16054320 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710840 M 17421 1 0 "" esv6377 1 16049772 16059844 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28818 M 1 0 0 "" esv2672024 1 16050021 16059762 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6214660,essv6512664,essv6552675,essv6543773,essv5994980,essv6444703,essv5708728,essv5726526,essv5955756,essv6313064,essv6311138,essv5498358,essv6206305,essv5732786,essv6310035,essv5779194,essv6563042,essv5421071,essv6514107,essv6566576,essv5543906,essv6528095,essv6417678,essv6217185,essv6004070,essv6247239,essv5866483,essv5408661,essv6466036,essv6473131,essv5653009,essv5820488,essv6334335,essv5797166,essv5649772,essv6203399,essv6406274,essv5509924,essv5992121,essv5697412,essv6086404,essv5888412,essv6590246,essv5895599,essv5727877,essv6225479,essv6143236,essv5738637,essv5460695,essv5861237,essv5795038,essv5775668,essv5956397,essv6215867,essv6535746,essv6021311,essv5910472,essv5723037,essv5725607,essv5880309,essv6250085,essv6303815,essv5550252,essv6319461,essv6375733,essv5947711,essv5880159,essv6425458,essv5687736,essv5950603,essv6076160,essv5804802,essv5592664,essv6318323,essv6170837,essv5868719,essv6465427,essv6320475,essv6556176,essv5949634,essv6578329,essv5843872,essv6159718,essv6563180,essv6060239,essv5456993,essv5882752,essv5918552,essv5720498,essv6155819,essv5581282,essv5570627,essv6272791,essv6243403,essv6529133,essv6025595,essv6192930,essv5506546,essv5522656,essv5494124,essv6091489,essv6430086,essv5664202,essv6172582,essv5937119,essv5904448,essv5996592,essv5578112,essv6499853,essv5586249,essv5485270,essv5414192,essv5988552,essv5793220,essv5609847,essv6109863,essv6024964,essv5666832,essv6282654,essv5416876,essv5647478,essv6510333,essv6364016,essv5846842,essv5468519,essv5531874,essv5568392,essv6003113,essv6355273,essv5633393,essv6294008,essv6058914,essv5658413,essv5668780,essv6001397,essv5988070,essv6408607,essv5479995,essv6526622,essv6295563,essv6455941,essv5563176,essv6089675,essv6402376,essv6329539,essv5858629,essv5543186,essv6385341,essv5857865,essv6597076,essv5528176,essv6078023 M 1151 0 152 "" HG00120,HG00133,HG00146,HG00157,HG00233,HG00565,HG01097,HG01113,HG01254,HG01356,HG01383,HG01440,HG01515,HG01516,HG01518,HG01550,HG01551,NA06985,NA06986,NA07037,NA07051,NA07056,NA10851,NA11892,NA11918,NA11920,NA11933,NA11995,NA12155,NA12273,NA12286,NA12287,NA12340,NA12347,NA12348,NA12383,NA12413,NA12489,NA12716,NA12717,NA12748,NA12761,NA12777,NA12778,NA12827,NA12829,NA12830,NA12842,NA18488,NA18502,NA18542,NA18547,NA18552,NA18562,NA18564,NA18572,NA18574,NA18576,NA18592,NA18609,NA18637,NA18916,NA18947,NA18948,NA18959,NA18964,NA18980,NA18983,NA18985,NA18999,NA19004,NA19005,NA19007,NA19054,NA19055,NA19060,NA19063,NA19065,NA19066,NA19070,NA19074,NA19083,NA19087,NA19093,NA19172,NA19189,NA19256,NA19373,NA19393,NA19404,NA19445,NA19453,NA19648,NA19654,NA19655,NA19679,NA19726,NA19728,NA19731,NA19747,NA19750,NA19758,NA19774,NA19776,NA19777,NA19780,NA19782,NA19785,NA19835,NA20127,NA20291,NA20296,NA20299,NA20314,NA20344,NA20505,NA20506,NA20509,NA20512,NA20517,NA20518,NA20527,NA20528,NA20529,NA20530,NA20533,NA20534,NA20538,NA20541,NA20543,NA20752,NA20755,NA20758,NA20759,NA20760,NA20761,NA20766,NA20769,NA20770,NA20771,NA20772,NA20787,NA20792,NA20796,NA20804,NA20808,NA20810,NA20811,NA20813,NA20814,NA20818,NA20828 esv1006289 1 16050022 16050022 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3572231 M 3 1 0 "" HuRef esv1779187 1 16050023 16050023 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3873209 M 2 1 0 "" HuRef esv2744386 1 16050242 16059727 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6906101,essv6776937,essv6696989,essv6921722,essv6937680,essv6692764,essv6941783,essv6946498,essv6877666 M 96 0 9 "" SSM014,SSM018,SSM022,SSM023,SSM024,SSM037,SSM038,SSM067,SSM093 nsv545640 1 16050336 16061078 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710842 M 17421 1 0 "" esv3448687 1 16057170 16058768 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692007 M 185 1 0 "" NA19239 esv1072127 1 16094728 16094728 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3733226 M 2 1 0 "" HuRef esv2674944 1 16103207 16108691 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5620580,essv5735031,essv5977599,essv6200466,essv5749349,essv6207393,essv5849998,essv6055609,essv5566499,essv5809448,essv6082751,essv6338934,essv5630758,essv5968961 M 1151 0 14 "" HG01083,HG01390,NA19235,NA19248,NA19347,NA19390,NA19394,NA19397,NA19403,NA19431,NA19434,NA19440,NA19455,NA19462 nsv833869 1 16110258 16278634 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443029 M 95 0 1 "" nsv470699 1 16139508 16204221 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547711 M 443 0 1 "" HGDP00697 esv1258099 1 16164060 16164060 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4037753 M 2 1 0 "" HuRef esv2744397 1 16165914 16166422 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6675202,essv6748387 M 96 0 2 "" SSM008,SSM032 esv1271324 1 16166152 16166212 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3655096 M 2 0 1 "" HuRef dgv2e180 1 16166169 16166240 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv993479,esv993773 M 3 0 1 "" HuRef nsv545641 1 16203554 16334932 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173785 M 17421 0 1 "" HGDP01309 nsv954845 1 16215106 16237105 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003131 M 1 0 1 "" BILGI_BIOE nsv3520 1 16221313 16255751 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2762 M 9 1 0 "" NA18555 nsv545642 1 16259323 16346064 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173786 M 17421 0 1 "" HGDP00286 esv1036042 1 16311087 16311087 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3767129 M 2 1 0 "" HuRef esv2618916 1 16313273 16313325 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5350545 M 1 0 1 "" NA18507 nsv947414 1 16321413 16346287 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2764539 M 97 1 0 "" HGDP00542 esv2667137 1 16323217 16330880 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6419344 M 1151 0 1 "" HG00732 nsv511679 1 16360106 16364455 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626317 M 1 0 1 "" 1 nsv945790 1 16368744 16369521 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756286,nssv1756281,nssv1756283,nssv1756262,nssv1756207,nssv1756276,nssv1756219,nssv1756231,nssv1756212,nssv1756249,nssv1756220,nssv1756226,nssv1756288,nssv1756251,nssv1756222,nssv1756300,nssv1756213,nssv1756261,nssv1756289,nssv1756254,nssv1756209,nssv1756272,nssv1756224,nssv1756263,nssv1756215,nssv1756241,nssv1756211,nssv1756278,nssv1756218,nssv1756275,nssv1756216,nssv1756259,nssv1756287,nssv1756295,nssv1756221,nssv1756298,nssv1756210,nssv1756245,nssv1756284,nssv1756293,nssv1756214,nssv1756302,nssv1756292,nssv1756273,nssv1756208,nssv1756239,nssv1756217,nssv1756301,nssv1756223,nssv1756296,nssv1756291,nssv1756271,nssv1756285,nssv1756240,nssv1756225,nssv1756255,nssv1756228,nssv1756256,nssv1756253,nssv1756232,nssv1756233,nssv1756270,nssv1756248,nssv1756282,nssv1756267,nssv1756252,nssv1756236,nssv1756290,nssv1756274,nssv1756250,nssv1756242,nssv1756277,nssv1756229,nssv1756258,nssv1756266,nssv1756246,nssv1756269,nssv1756297,nssv1756268,nssv1756230,nssv1756257,nssv1756238,nssv1756279,nssv1756243,nssv1756227,nssv1756264,nssv1756235,nssv1756206,nssv1756234,nssv1756294,nssv1756244,nssv1756265,nssv1756260,nssv1756299,nssv1756237,nssv1756280,nssv1756247 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv829581 1 16422155 16428540 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1421445 M 31 0 1 "" NA18997 esv2675247 1 16423000 16430347 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5844196,essv5923478,essv6408124,essv5998659,essv6234125,essv5861121,essv5934337 M 1151 0 7 "" HG00448,HG00501,HG00512,HG00524,HG00626,HG00629,HG00663 esv1035588 1 16424218 16424218 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3853896 M 2 1 0 "" HuRef esv2674598 1 16424661 16428623 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5702426,essv5794132,essv6498947,essv6031717,essv6459305,essv6334699,essv6096210,essv5767891,essv6007559,essv6414142,essv5496584,essv6114958,essv5945549,essv5447426 M 1151 0 14 "" HG00448,HG00501,HG00512,HG00524,HG00663,NA18548,NA18557,NA18561,NA18574,NA18576,NA18596,NA18633,NA19003,NA19087 dgv19n67 1 16424664 16428540 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv829592,nsv829603 M 31 0 3 "" AK14,AK6,NA18969 esv2744408 1 16424697 16428611 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6874707,essv6718909,essv6764164,essv6744935,essv6871715 M 96 0 5 "" SSM007,SSM055,SSM063,SSM091,SSM092 esv2758925 1 16437838 17157486 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757725,esv2756838 M 270 182 33 "" NA06991,NA06993,NA07000,NA07019,NA07022,NA07034,NA07048,NA07055,NA07357,NA10830,NA10831,NA10847,NA10851,NA10855,NA10860,NA10861,NA10863,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11881,NA11882,NA11992,NA11993,NA11994,NA11995,NA12003,NA12004,NA12043,NA12044,NA12056,NA12144,NA12146,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12707,NA12717,NA12740,NA12750,NA12751,NA12753,NA12760,NA12762,NA12763,NA12801,NA12812,NA12813,NA12864,NA12865,NA12872,NA12873,NA12875,NA12878,NA12891,NA18500,NA18501,NA18502,NA18503,NA18504,NA18505,NA18506,NA18507,NA18515,NA18516,NA18517,NA18521,NA18522,NA18523,NA18526,NA18529,NA18540,NA18542,NA18545,NA18547,NA18555,NA18558,NA18561,NA18563,NA18564,NA18566,NA18570,NA18571,NA18577,NA18579,NA18582,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18623,NA18632,NA18635,NA18636,NA18637,NA18853,NA18854,NA18855,NA18856,NA18863,NA18870,NA18872,NA18913,NA18940,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18967,NA18968,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19098,NA19099,NA19100,NA19101,NA19103,NA19116,NA19119,NA19120,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19139,NA19140,NA19142,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19173,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19221,NA19222,NA19223,NA19238,NA19239 nsv428421 1 16437838 17157486 CNV gain+loss Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv454343,nssv454276,nssv454332,nssv454265,nssv454421,nssv454521,nssv454365,nssv454299,nssv454476,nssv454354,nssv454509,nssv454321,nssv454387,nssv454410,nssv454443,nssv454487,nssv454376,nssv454454,nssv454398,nssv454465,nssv454498,nssv454310,nssv454432 M 62 17 6 "" HGDP00449,HGDP00450,HGDP00460,HGDP00462,HGDP00463,HGDP00467,HGDP00472,HGDP00476,HGDP00984,HGDP00986,HGDP01086,HGDP01088,HGDP01093,HGDP01094,NA18498,NA18916,NA19096,NA19147,NA19181,NA19225,NA19257 dgv1n68 1 16439276 16610197 CNV loss Wong_et_al_2007 17160897 BAC aCGH nsv834092,nsv833980 M 95 0 8 "" nsv9213 1 16450522 16453038 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv13424,nssv12118,nssv15103 M 31 0 3 "" NA18504,NA18517,NA19144 nsv9324 1 16470652 16954729 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv13089,nssv15768,nssv15104,nssv14084,nssv14744,nssv14082,nssv17423,nssv14415,nssv13752,nssv13092,nssv13104,nssv12097,nssv12448,nssv13090,nssv13750,nssv16414,nssv12428,nssv14414,nssv14080,nssv13761,nssv15438,nssv29255,nssv13742,nssv14760,nssv11767,nssv15754,nssv13749,nssv12098,nssv13096,nssv12758,nssv11785,nssv12116,nssv16763,nssv28922,nssv15779,nssv17093,nssv13426,nssv14085,nssv29254,nssv13420,nssv12440,nssv13756,nssv11768,nssv14410,nssv13422,nssv13754,nssv16084,nssv12766,nssv14421,nssv14100,nssv12753,nssv13419,nssv15424,nssv14430,nssv12778,nssv16098,nssv14091,nssv14740 M 31 11 17 "" NA07029,NA07048,NA10839,NA10847,NA11830,NA12155,NA12740,NA12802,NA18502,NA18517,NA18537,NA18552,NA18564,NA18853,NA18860,NA18972,NA18975,NA18980,NA19007,NA19144,NA19173,NA19221 nsv436814 1 16479599 16623746 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465509 M 2 1 0 "" NA18505 esv2750816 1 16482199 16703219 CNV gain Pinto_et_al_2007 17911159 SNP array essv6985510,essv6981188 M 771 2 0 "" BEC_362 esv2677321 1 16483368 16485099 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6025226,essv5994676,essv5814400,essv5749056,essv6341487,essv5925942,essv5789982,essv5677064,essv5764841,essv6008582,essv6384264,essv5725325,essv5770402,essv5684720,essv6211001,essv6326321,essv6591590,essv6223308,essv5886295,essv5643548,essv6240662,essv5810140,essv6413235,essv5766029,essv6097680,essv5873459,essv5781062,essv6159131,essv5772336,essv5715096,essv6512322,essv6361728,essv5685352,essv5847629,essv5679780,essv5424664,essv6531900,essv6162882,essv5839539,essv6006605,essv5406731,essv6081357,essv6227728,essv6176931,essv5878129,essv5622317,essv6103297,essv6543948,essv5665727,essv6153540,essv5742037,essv5589069,essv5607387,essv6513444,essv5792515,essv6466185,essv5939358,essv5968737,essv5650036,essv5980873,essv6398890,essv5441457,essv5866644,essv5535525,essv6315322,essv5929046,essv5422968,essv6040129,essv5594740,essv5558209,essv6108738,essv6091706,essv5880396,essv5965649,essv6432913,essv5867128,essv5651548,essv5588104,essv6320568,essv6193516,essv6427061,essv6236486,essv6507242 M 1151 0 83 "" HG00641,HG01111,HG01390,HG01551,NA07346,NA11994,NA12763,NA12892,NA18486,NA18504,NA18510,NA18516,NA18517,NA18519,NA18520,NA18858,NA18868,NA18871,NA18912,NA18917,NA18924,NA18953,NA18976,NA18981,NA19098,NA19102,NA19107,NA19108,NA19116,NA19129,NA19131,NA19147,NA19152,NA19171,NA19172,NA19198,NA19235,NA19238,NA19239,NA19240,NA19313,NA19318,NA19321,NA19327,NA19331,NA19332,NA19334,NA19338,NA19346,NA19347,NA19350,NA19359,NA19372,NA19375,NA19377,NA19381,NA19382,NA19384,NA19385,NA19394,NA19395,NA19396,NA19397,NA19399,NA19428,NA19429,NA19431,NA19446,NA19461,NA19462,NA19466,NA19467,NA19469,NA19625,NA19835,NA19900,NA19909,NA19914,NA19916,NA20126,NA20281,NA20341,NA20342 nsv159668 1 16483371 16485101 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178246 M 24 "" dgv10e201 1 16483566 16677119 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2744419,esv2744452 M 96 0 21 "" SSM001,SSM005,SSM009,SSM017,SSM019,SSM023,SSM025,SSM033,SSM034,SSM038,SSM043,SSM047,SSM055,SSM056,SSM057,SSM066,SSM068,SSM077,SSM078,SSM084,SSM095 nsv945793 1 16484768 16637149 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756399,nssv1756357,nssv1756400,nssv1756358,nssv1756559,nssv1756364,nssv1756330,nssv1756366,nssv1756397,nssv1756561,nssv1756321,nssv1756360,nssv1756323,nssv1756372,nssv1756333,nssv1756564,nssv1756326,nssv1756568,nssv1756327,nssv1756361,nssv1756336,nssv1756567,nssv1756338,nssv1756395,nssv1756558,nssv1756566,nssv1756555,nssv1756350,nssv1756334,nssv1756385,nssv1756329,nssv1756320,nssv1756556,nssv1756376,nssv1756335,nssv1756345,nssv1756332,nssv1756355,nssv1756325,nssv1756349,nssv1756554,nssv1756348,nssv1756398,nssv1756396,nssv1756331,nssv1756343,nssv1756322,nssv1756569,nssv1756337,nssv1756394,nssv1756324,nssv1756365,nssv1756328,nssv1756368,nssv1756339,nssv1756374,nssv1756341,nssv1756340,nssv1756560,nssv1756353,nssv1756359,nssv1756391,nssv1756373,nssv1756375,nssv1756377,nssv1756383,nssv1756562,nssv1756344,nssv1756393,nssv1756390,nssv1756351,nssv1756356,nssv1756370,nssv1756382,nssv1756392,nssv1756389,nssv1756563,nssv1756380,nssv1756565,nssv1756362,nssv1756363,nssv1756346,nssv1756352,nssv1756369,nssv1756384,nssv1756367,nssv1756347,nssv1756379,nssv1756557,nssv1756354,nssv1756386,nssv1756388,nssv1756342,nssv1756378,nssv1756381,nssv1756387,nssv1756371 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv1e203 1 16487426 16935752 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array esv2763736,esv2764199 M 1109 115 105 "" RW_0003,RW_0007,RW_0020,RW_0021,RW_0023,RW_0030,RW_0032,RW_0034,RW_0041,RW_0043,RW_0046,RW_0047,RW_0054,RW_0060,RW_0063,RW_0068,RW_0069,RW_0078,RW_0084,RW_0085,RW_0087,RW_0093,RW_0098,RW_0099,RW_0101,RW_0105,RW_0106,RW_0108,RW_0110,RW_0112,RW_0120,RW_0146,RW_0148,RW_0156,RW_0158,RW_0161,RW_0162,RW_0169,RW_0173,RW_0178,RW_0179,RW_0180,RW_0183,RW_0186,RW_0187,RW_0190,RW_0191,RW_0192,RW_0194,RW_0195,RW_0196,RW_0210,RW_0212,RW_0215,RW_0216,RW_0217,RW_0218,RW_0221,RW_0233,RW_0234,RW_0250,RW_0251,RW_0255,RW_0257,RW_0258,RW_0268,RW_0272,RW_0281,RW_0288,RW_0289,RW_0293,RW_0296,RW_0309,RW_0310,RW_0311,RW_0314,RW_0315,RW_0318,RW_0321,RW_0324,RW_0327,RW_0333,RW_0335,RW_0346,RW_0348,RW_0354,RW_0357,RW_0359,RW_0361,RW_0520,RW_0521,RW_0525,RW_0526,RW_0531,RW_0536,RW_0540,RW_0545,RW_0546,RW_0552,RW_0558,RW_0559,RW_0560,RW_0567,RW_0570,RW_0573,RW_0574,RW_0583,RW_0585,RW_0593,RW_0599,RW_0603,RW_0604,RW_0615,RW_0620,RW_0631,RW_0640,RW_0643,RW_0648,RW_0655,RW_0658,RW_0664,RW_0666,SW_0002,SW_0009,SW_0046,SW_0057,SW_0058,SW_0060,SW_0062,SW_0077,SW_0089,SW_0116,SW_0146,SW_0147,SW_0149,SW_0173,SW_0185,SW_0230,SW_0253,SW_0257,SW_0269,SW_0375,SW_0605,SW_0638,SW_0639,SW_0659,SW_0757,SW_0759,SW_0801,SW_0803,SW_0829,SW_0833,SW_0834,SW_0859,SW_0885,SW_1012,SW_1045,SW_1064,SW_1074,SW_1083,SW_1095,SW_1100,SW_1106,SW_1111,SW_1112,SW_1118,SW_1124,SW_1137,SW_1149,SW_1153,SW_1166,SW_1167,SW_1176,SW_1180,SW_1190,SW_1196,SW_1198,SW_1201,SW_1213,SW_1240,SW_1242,SW_1277,SW_1282,SW_1295,SW_1305,SW_1306,SW_1323,SW_1325,SW_1327,SW_1340,SW_1354,SW_1356,SW_1365,SW_1367,SW_1371,SW_1402,SW_1404,SW_1405,SW_1406,SW_1424,SW_1428,SW_1433,SW_1435,SW_1436,SW_1438,SW_1439,SW_1443,SW_1450,SW_1456,SW_1467,SW_1472,SW_1478,SW_1503,SW_1527 esv2678817 1 16488096 16636764 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6308194 M 1151 0 1 "" NA18528 dgv46e59 1 16494770 16495968 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3429753,esv3359930 M 185 2 0 "" NA19239,NA19240 esv33046 1 16495063 16686029 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101730,essv94690,essv96254,essv97341,essv96456,essv101021,essv95920,essv98327,essv101566,essv95236,essv97938 M 51 0 11 "" 21603,21693,21772,21791,21837,21872,21879,21909,21911,22261,22371 dgv47e59 1 16505070 16517268 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3383407,esv3431489,esv3385063,esv3380800,esv3342628 M 185 5 0 "" NA12878,NA12891,NA12892,NA19238,NA19240 dgv20n67 1 16505385 16780006 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821699,nsv821710,nsv829614,nsv829636 M 31 4 0 "" NA18564,NA18570,NA18973,NA18997 nsv821511 1 16505385 16780006 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420247 M 1 1 0 "" NA10851 nsv829625 1 16505385 16955258 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1434862,nssv1423110,nssv1437217,nssv1433412,nssv1436329,nssv1423946,nssv1423407,nssv1428819,nssv1427247,nssv1428017,nssv1431796 M 31 11 0 "" AK10,AK12,AK20,AK8,NA18526,NA18542,NA18582,NA18942,NA18949,NA18968,NA18999 esv2744430 1 16505532 16523256 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6813170,essv6714246,essv6917430,essv6729619,essv6747780,essv6816585,essv6744936 M 96 0 7 "" SSM017,SSM043,SSM047,SSM055,SSM056,SSM077,SSM078 esv3367641 1 16505870 16509568 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692016 M 185 1 0 "" NA19239 esv29642 1 16506591 16799134 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv12183,esv15698,esv17374,esv19804,esv13221,esv18078,esv11265,esv17891,esv17903,esv16441,esv18819,esv12048,esv20432,esv10634,esv20185,esv20857 M 40 26 20 "" NA07045,NA11894,NA11931,NA11993,NA12004,NA12044,NA12156,NA12239,NA12287,NA12414,NA12489,NA12749,NA12828,NA12878,NA15510,NA18502,NA18505,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv954846 1 16506706 16517005 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003133 M 1 1 0 "" BILGI_BIOE dgv21e199 1 16506846 16675106 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2666304,esv2669650,esv2668944,esv2667669,esv2667810 M 1151 0 24 "" HG00123,HG00183,HG00236,HG00336,HG00344,HG00418,HG00427,HG00512,HG00608,HG00640,HG00651,HG00662,HG00698,HG00708,HG01082,HG01350,HG01488,NA18535,NA18574,NA18599,NA18636,NA19439,NA19463,NA19712 esv2744441 1 16508044 16509932 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6714246,essv6917430,essv6729619,essv6747780,essv6816585,essv6744936 M 96 0 6 "" SSM017,SSM043,SSM047,SSM055,SSM056,SSM078 esv2670550 1 16508067 16509820 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5681151,essv5787027,essv5820642,essv5731108,essv6210974,essv5639312,essv5816415,essv5721291,essv5723249,essv5914502,essv6518200,essv6297798,essv5818513,essv6003545,essv5769310,essv5441244,essv5614581,essv6316303,essv6457853,essv5761106,essv6159093,essv5489675,essv5720451,essv5400511,essv6476208,essv5971178,essv6121551,essv5878340,essv5853498,essv6166189,essv6100767,essv5667448,essv5673967,essv5910548,essv5411638,essv6284702,essv6434867,essv5662725,essv5473218,essv6239663,essv5893831,essv6388576,essv6027230,essv5648712,essv6378939,essv5975796,essv5473340,essv5884907,essv5983898,essv5875749,essv5655327 M 1151 0 51 "" HG01048,HG01098,HG01112,HG01251,HG01253,HG01254,HG01456,HG01494,HG01495,HG01521,HG01522,HG01550,NA06989,NA18553,NA18562,NA18965,NA19003,NA19172,NA19223,NA19315,NA19729,NA19732,NA19746,NA19747,NA19750,NA19758,NA19762,NA19773,NA19774,NA19780,NA19783,NA19785,NA19788,NA19985,NA20282,NA20287,NA20289,NA20291,NA20296,NA20322,NA20332,NA20334,NA20336,NA20340,NA20342,NA20346,NA20356,NA20530,NA20582,NA20757,NA20796 nsv955054 1 16508116 16509822 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000486 M 1 0 1 "" BILGI_BIOE esv3385457 1 16510070 16517268 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692021 M 185 1 0 "" NA19239 nsv472863 1 16517255 16517255 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012769 M 9 1 0 "" NA18555 dgv48e59 1 16528170 16537568 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3407285,esv3441445,esv3429655,esv3421741 M 185 4 0 "" NA12878,NA12891,NA19238,NA19240 dgv49e59 1 16531270 16676368 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3326076,esv3387438,esv3385432,esv3413552,esv3442238 M 185 5 0 "" NA12878,NA12891,NA12892,NA19238,NA19239 dgv50e59 1 16538070 16547968 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3432763,esv3434952 M 185 2 0 "" NA12892,NA19240 nsv834203 1 16539649 16583626 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443162,nssv1443140,nssv1443129,nssv1443151,nssv1443173,nssv1443185,nssv1443196,nssv1443207,nssv1443218,nssv1443229,nssv1443240,nssv1443251 M 95 0 12 "" nsv954847 1 16540706 16582705 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003134 M 1 1 0 "" BILGI_BIOE esv3429389 1 16548270 16569368 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692033 M 185 1 0 "" NA19240 nsv499577 1 16552870 16680474 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585483 M 9 0 0 "" nsv7173 1 16559079 16937819 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1893,nssv10485,nssv10882,nssv3851,nssv657,nssv747,nssv6334,nssv5331,nssv9691,nssv9355,nssv10523,nssv10890,nssv1910,nssv1903,nssv5314,nssv9682,nssv3861,nssv9949,nssv11237,nssv10507,nssv929,nssv9405,nssv5304,nssv1863,nssv1777,nssv3885 M 9 0 0 "" NA12156,NA12878,NA15510,NA18507,NA18517,NA18555,NA18956,NA19129,NA19240 nsv3632 1 16559351 16593929 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2682,nssv9681,nssv3801,nssv5295,nssv11241,nssv564,nssv6260 M 9 7 0 "" NA12156,NA12878,NA15510,NA18507,NA18555,NA19129,NA19240 nsv834247 1 16560068 16670676 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1443373,nssv1443362,nssv1443384,nssv1443262,nssv1443273,nssv1443284,nssv1443307,nssv1443296,nssv1443340,nssv1443351,nssv1443318,nssv1443329 M 95 1 11 "" nsv221 1 16561801 16565193 CNV insertion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv221 M 1 1 0 "" NA15510 nsv471343 1 16563917 16592194 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548025,nssv548026,nssv548027 M 3 3 0 "" JDW,NA18507,YH nsv471344 1 16563917 16613487 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548029,nssv548028,nssv548030 M 3 3 0 "" JDW,NA18507,YH nsv482190 1 16563917 16613487 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558551 M 1 1 0 "" KB1 nsv945569 1 16564012 16565569 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2568979,nssv2569059,nssv2568974,nssv2569063,nssv2568976,nssv2569011,nssv2568975,nssv2569039,nssv2569055,nssv2569037,nssv2568970,nssv2569034,nssv2568971,nssv2569061,nssv2569052,nssv2569023,nssv2569049,nssv2568996,nssv2569047,nssv2569045,nssv2569046,nssv2569009,nssv2568983,nssv2569013,nssv2569048,nssv2569016,nssv2569050,nssv2569018,nssv2568973,nssv2568997,nssv2568982,nssv2569029,nssv2568978,nssv2568991,nssv2569056,nssv2569033,nssv2568984,nssv2569003,nssv2568990,nssv2569035,nssv2568981,nssv2569028,nssv2568980,nssv2569007,nssv2568987,nssv2569057,nssv2569051,nssv2569015,nssv2568986,nssv2569053,nssv2568985,nssv2569017,nssv2568972,nssv2569005,nssv2568989,nssv2569067,nssv2569020,nssv2569004,nssv2569060,nssv2569006,nssv2569044,nssv2568998,nssv2569000,nssv2569041,nssv2569001,nssv2569066,nssv2569002,nssv2569062,nssv2569040,nssv2569022,nssv2569058,nssv2568992,nssv2569025,nssv2569069,nssv2568993,nssv2569036,nssv2569019,nssv2568969,nssv2569026,nssv2569068,nssv2569030,nssv2569031,nssv2569064,nssv2569014,nssv2569042,nssv2569012,nssv2569008,nssv2569024,nssv2569027,nssv2568994,nssv2569038,nssv2568995 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv957837 1 16564643 16567116 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3004997 M 1 0 1 "" BILGI_BIOE nsv514916 1 16564953 16567480 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2851654,nssv2851665,nssv2851692,nssv2853033,nssv2853064,nssv2853041,nssv2853047,nssv2853006,nssv2851713,nssv2851703,nssv2851660,nssv2851760,nssv2853060,nssv2851628,nssv2851765,nssv2853011,nssv2853014,nssv2853164,nssv2852929,nssv2851652,nssv2853027,nssv2853203,nssv2851656,nssv2853131,nssv2853173,nssv2851787,nssv2853088,nssv2852994,nssv2851667,nssv2851647,nssv2851770,nssv2853186,nssv2853158,nssv2853046,nssv2852941,nssv2851750,nssv2852968,nssv2851613,nssv2853030,nssv2853162,nssv2853004,nssv2851805,nssv2852938,nssv2851676,nssv2851701,nssv2852975,nssv2853007,nssv2853045,nssv2852932,nssv2851658,nssv2852940,nssv2851704,nssv2853021,nssv2853070,nssv2853182,nssv2853202,nssv2853143,nssv2853176,nssv2852992,nssv2853204,nssv2851810,nssv2851801,nssv2853137,nssv2853067,nssv2853177,nssv2851637,nssv2851756,nssv2853170,nssv2852923,nssv2851651,nssv2851804,nssv2851636,nssv2852974,nssv2853032,nssv2853200,nssv2852970,nssv2851662,nssv2851659,nssv2851669,nssv2851690,nssv2851634,nssv2853201,nssv2853069,nssv2851661,nssv2853066,nssv2853124,nssv2853149,nssv2851725,nssv2853017,nssv2851738,nssv2853120,nssv2852956,nssv2851728,nssv2851622,nssv2853187,nssv2853083,nssv2851686,nssv2851712,nssv2851621,nssv2851776,nssv2853024,nssv2852935,nssv2851633,nssv2853207,nssv2853175,nssv2853107,nssv2853146,nssv2853138,nssv2851644,nssv2853097,nssv2851812,nssv2853125,nssv2853013,nssv2853206,nssv2851803,nssv2853087,nssv2853141,nssv2853134,nssv2851740,nssv2853095,nssv2853144,nssv2851773,nssv2852951,nssv2851747,nssv2851796,nssv2852976,nssv2851731,nssv2852997,nssv2853039,nssv2852999,nssv2851802,nssv2853140,nssv2851702,nssv2852948,nssv2851677,nssv2853059,nssv2853133,nssv2851685,nssv2852986,nssv2851649,nssv2853082,nssv2851629,nssv2853050,nssv2853012,nssv2851729,nssv2851732,nssv2853155,nssv2853085,nssv2853001,nssv2851772,nssv2851682,nssv2853043,nssv2853150,nssv2851642,nssv2851746,nssv2853102,nssv2853089,nssv2851723,nssv2853040,nssv2853054,nssv2853105,nssv2852936,nssv2852962,nssv2851724,nssv2851696,nssv2851771,nssv2853023,nssv2851762,nssv2853103,nssv2851777,nssv2851715,nssv2853199,nssv2853109,nssv2851671,nssv2853188,nssv2851779,nssv2851640,nssv2853076,nssv2851639,nssv2853172,nssv2852971,nssv2851673,nssv2853130,nssv2851761,nssv2851638,nssv2853096,nssv2853139,nssv2851744,nssv2853065,nssv2851720,nssv2851759,nssv2851727,nssv2853111,nssv2851815,nssv2851711,nssv2852953,nssv2851814,nssv2852926,nssv2852995,nssv2851616,nssv2853159,nssv2852943,nssv2853116,nssv2853077,nssv2851733,nssv2852980,nssv2851643,nssv2853016,nssv2853191,nssv2851666,nssv2852998,nssv2851809,nssv2853074,nssv2853063,nssv2852928,nssv2852966,nssv2853112,nssv2853113,nssv2852978,nssv2851797,nssv2853181,nssv2853101,nssv2853072,nssv2853052,nssv2853145,nssv2851614,nssv2851650,nssv2853151,nssv2853152,nssv2853135,nssv2852991,nssv2853008,nssv2851749,nssv2851768,nssv2853157,nssv2852987,nssv2851774,nssv2853053,nssv2852982,nssv2851808,nssv2853163,nssv2853056,nssv2853049,nssv2852981,nssv2853119,nssv2853171,nssv2852946,nssv2851648,nssv2851775,nssv2853114,nssv2851714,nssv2851763,nssv2853015,nssv2851813,nssv2851726,nssv2851755,nssv2851707,nssv2851691,nssv2852944,nssv2853086,nssv2853117,nssv2853174,nssv2851785,nssv2853205,nssv2853005,nssv2851807,nssv2851663,nssv2851739,nssv2851751,nssv2852967,nssv2852945,nssv2852958,nssv2851806,nssv2852985,nssv2853147,nssv2851618,nssv2851706,nssv2852947,nssv2851681,nssv2853178,nssv2851753,nssv2853044,nssv2853071,nssv2851626,nssv2853073,nssv2852993,nssv2851789,nssv2851635,nssv2853185,nssv2853099,nssv2853029,nssv2851700,nssv2851687,nssv2851781,nssv2851625,nssv2853160,nssv2852933,nssv2853153,nssv2853019,nssv2853057,nssv2852959,nssv2853128,nssv2853002,nssv2851668,nssv2852989,nssv2851678,nssv2851795,nssv2852957,nssv2853196,nssv2853022,nssv2851657,nssv2851697,nssv2853048,nssv2851695,nssv2853184,nssv2851675,nssv2853161,nssv2852979,nssv2851709,nssv2853020,nssv2853123,nssv2853166,nssv2853068,nssv2853169,nssv2851646,nssv2851734,nssv2851627,nssv2852937,nssv2853192,nssv2851718,nssv2853115,nssv2851757,nssv2852961,nssv2853179,nssv2851764,nssv2853055,nssv2851717,nssv2851623,nssv2853025,nssv2853037,nssv2852924,nssv2853165,nssv2853092,nssv2851689,nssv2853180,nssv2852983,nssv2851736,nssv2853061,nssv2852984,nssv2851684,nssv2851798,nssv2851752,nssv2851743,nssv2853183,nssv2853026,nssv2853080,nssv2853104,nssv2851632,nssv2853189,nssv2853098,nssv2853003,nssv2851783,nssv2852939,nssv2852927,nssv2851786,nssv2853091,nssv2853035,nssv2852973,nssv2853122,nssv2851730,nssv2851698,nssv2853127,nssv2852934,nssv2853129,nssv2852955,nssv2853010,nssv2851722,nssv2851699,nssv2851793,nssv2853093,nssv2853034,nssv2853121,nssv2852930,nssv2853193,nssv2853197,nssv2851631,nssv2853106,nssv2853195,nssv2852964,nssv2853142,nssv2853194,nssv2852969,nssv2852965,nssv2853042,nssv2851693,nssv2853081,nssv2851708,nssv2853110,nssv2851766,nssv2851645,nssv2851688,nssv2853154,nssv2851800,nssv2853058,nssv2851778,nssv2853018,nssv2853038,nssv2851679,nssv2851719,nssv2851624,nssv2851742,nssv2851745,nssv2851794,nssv2853167,nssv2852925,nssv2851780,nssv2852990,nssv2851767,nssv2853051,nssv2853132,nssv2853108,nssv2851630,nssv2852931,nssv2851811,nssv2851694,nssv2851641,nssv2853118,nssv2852950,nssv2851741,nssv2851737,nssv2851735,nssv2853000,nssv2853031,nssv2851716,nssv2853028,nssv2853009,nssv2852963,nssv2851705,nssv2853190,nssv2853156,nssv2852954,nssv2853094,nssv2851784,nssv2853075,nssv2851670,nssv2851792,nssv2851680,nssv2853148,nssv2853126,nssv2851664,nssv2851620,nssv2851769,nssv2853136,nssv2851788,nssv2851653,nssv2853036,nssv2853084,nssv2853168,nssv2852996,nssv2851721,nssv2852972,nssv2851799,nssv2853079,nssv2851619,nssv2851782,nssv2853078,nssv2851791,nssv2853062,nssv2853090,nssv2851615,nssv2852960,nssv2851655,nssv2851758,nssv2851617,nssv2853100,nssv2851710,nssv2852988,nssv2853198,nssv2851754,nssv2851674,nssv2851790,nssv2851748,nssv2852942,nssv2852977,nssv2852949,nssv2852952,nssv2851683,nssv2851672 M 2366 488 0 "" NA06984,NA06985,NA06986,NA06989,NA06991,NA06993,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10830,NA10831,NA10835,NA10836,NA10837,NA10838,NA10839,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10852,NA10855,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11893,NA11894,NA11917,NA11918,NA11919,NA11920,NA11930,NA11992,NA11993,NA11994,NA11995,NA12004,NA12005,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12156,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12273,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12329,NA12335,NA12336,NA12340,NA12341,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12414,NA12485,NA12489,NA12546,NA12708,NA12716,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12761,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18518,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19107,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19172,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19236,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21404,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21490,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21601,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21717,NA21718 nsv945570 1 16565569 16567185 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2569089,nssv2569092,nssv2569086,nssv2569977,nssv2569985,nssv2569991,nssv2569083,nssv2569112,nssv2569091,nssv2569135,nssv2569988,nssv2569118,nssv2569085,nssv2569137,nssv2569088,nssv2570004,nssv2569983,nssv2569115,nssv2569987,nssv2569070,nssv2569075,nssv2569979,nssv2569077,nssv2569133,nssv2569081,nssv2569980,nssv2569992,nssv2569111,nssv2569984,nssv2569127,nssv2569986,nssv2569982,nssv2569080,nssv2569106,nssv2569073,nssv2569994,nssv2569078,nssv2569103,nssv2569084,nssv2569981,nssv2569079,nssv2569114,nssv2569993,nssv2569122,nssv2569072,nssv2569100,nssv2569074,nssv2569101,nssv2569071,nssv2569097,nssv2569082,nssv2569102,nssv2569090,nssv2569107,nssv2570003,nssv2569125,nssv2569134,nssv2569094,nssv2569976,nssv2569108,nssv2569996,nssv2569128,nssv2569095,nssv2569998,nssv2569105,nssv2570006,nssv2569119,nssv2569999,nssv2570001,nssv2569995,nssv2569093,nssv2569132,nssv2569130,nssv2569116,nssv2569096,nssv2569974,nssv2570002,nssv2569104,nssv2569124,nssv2569997,nssv2569990,nssv2569975,nssv2569126,nssv2569121,nssv2569117,nssv2569113,nssv2569136,nssv2569123,nssv2570005,nssv2569110,nssv2569099,nssv2569129 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3419518 1 16565804 16565804 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8808928 M 185 1 0 "" NA12878 nsv435932 1 16565894 16566012 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465620 M 2 1 0 "" NA15510 nsv159149 1 16565998 16567535 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177727 M 24 "" nsv436039 1 16566194 16566250 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465731 M 2 1 0 "" NA15510 nsv945571 1 16567185 16568023 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570030,nssv2570082,nssv2570023,nssv2570075,nssv2570025,nssv2570060,nssv2570036,nssv2570010,nssv2570039,nssv2570069,nssv2570037,nssv2570058,nssv2570029,nssv2570046,nssv2570105,nssv2570083,nssv2570097,nssv2570084,nssv2570100,nssv2570065,nssv2570101,nssv2570012,nssv2570024,nssv2570089,nssv2570038,nssv2570067,nssv2570026,nssv2570071,nssv2570096,nssv2570104,nssv2570032,nssv2570093,nssv2570098,nssv2570086,nssv2570028,nssv2570043,nssv2570031,nssv2570091,nssv2570021,nssv2570018,nssv2570020,nssv2570056,nssv2570106,nssv2570052,nssv2570102,nssv2570092,nssv2570035,nssv2570068,nssv2570040,nssv2570048,nssv2570034,nssv2570087,nssv2570027,nssv2570080,nssv2570079,nssv2570015,nssv2570107,nssv2570009,nssv2570061,nssv2570054,nssv2570062,nssv2570007,nssv2570016,nssv2570064,nssv2570049,nssv2570014,nssv2570047,nssv2570081,nssv2570074,nssv2570013,nssv2570045,nssv2570095,nssv2570059,nssv2570070,nssv2570053,nssv2570063,nssv2570090,nssv2570051,nssv2570057,nssv2570078,nssv2570042,nssv2570017,nssv2570076,nssv2570050,nssv2570103,nssv2570073,nssv2570085,nssv2570094,nssv2570008,nssv2570019,nssv2570072,nssv2570041 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945572 1 16568627 16594366 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570129,nssv2570184,nssv2570112,nssv2570152,nssv2570119,nssv2570146,nssv2570123,nssv2570177,nssv2570116,nssv2570172,nssv2570126,nssv2570183,nssv2570190,nssv2570140,nssv2570191,nssv2570193,nssv2570125,nssv2570157,nssv2570114,nssv2570130,nssv2570124,nssv2570144,nssv2570117,nssv2570168,nssv2570115,nssv2570170,nssv2570128,nssv2570156,nssv2570194,nssv2570155,nssv2570111,nssv2570174,nssv2570188,nssv2570179,nssv2570118,nssv2570137,nssv2570186,nssv2570142,nssv2570127,nssv2570164,nssv2570109,nssv2570131,nssv2570189,nssv2570182,nssv2570113,nssv2570158,nssv2570120,nssv2570178,nssv2570195,nssv2570134,nssv2570185,nssv2570175,nssv2570122,nssv2570149,nssv2570138,nssv2570133,nssv2570108,nssv2570181,nssv2570163,nssv2570136,nssv2570173,nssv2570166,nssv2570167,nssv2570169,nssv2570135,nssv2570159,nssv2570192,nssv2570162,nssv2570141,nssv2570145,nssv2570161,nssv2570151,nssv2570139,nssv2570180,nssv2570150,nssv2570148,nssv2570160,nssv2570171,nssv2570153,nssv2570147 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545643 1 16568781 16618863 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710843 M 17421 0 1 "" esv34697 1 16568781 16719151 CNV gain Pinto_et_al_2007 17911159 SNP array essv6990378,essv6979544,essv6986884 M 771 3 0 "" NA18570 esv3444386 1 16569870 16650068 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692035 M 185 1 0 "" NA19240 nsv3743 1 16573004 16619126 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv835,nssv3842 M 9 0 2 "" NA12878,NA19240 dgv1n16 1 16582198 16589150 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nsv436307,nsv435920 M 2 0 2 "" NA15510,NA18505 nsv954848 1 16583506 16702205 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003135 M 1 1 0 "" BILGI_BIOE nsv160674 1 16584260 16590563 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179252 M 24 "" esv2744463 1 16592869 16593006 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6941785 M 96 0 1 "" SSM023 esv2597795 1 16596035 16641943 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5337771 M 1 1 0 "" NA18507 nsv469795 1 16596745 16683598 CNV gain+loss Locke_et_al_2006 16826518 BAC aCGH nssv1674398,nssv1674594,nssv1675165,nssv1672635,nssv1675645,nssv1675471,nssv1673678,nssv1675110,nssv1674026,nssv1674352,nssv1675932,nssv1676452,nssv1673499,nssv1672101,nssv1675604,nssv1675262,nssv1675030,nssv1675328,nssv1673571,nssv1672293,nssv1672226,nssv1674737,nssv1676350,nssv1675154,nssv1675644,nssv1676473,nssv1672656,nssv1672511,nssv1673449,nssv1673706,nssv1674196,nssv1675283,nssv1674784,nssv1673830,nssv1672126,nssv1676008,nssv1673599,nssv1673729,nssv1676098,nssv1676595,nssv1674269,nssv1673029,nssv1673154,nssv1673422,nssv1675019,nssv1672065 M 265 45 1 "" nsv471655 1 16596746 16683598 CNV gain+loss Sharp_et_al_2005 15918152 BAC aCGH,FISH nssv550590,nssv550586,nssv550589,nssv550572,nssv550584,nssv550598,nssv550583,nssv550595,nssv550573,nssv550592,nssv550588,nssv550575,nssv550594,nssv550576,nssv550578,nssv550591,nssv550574,nssv550582,nssv550577,nssv550571,nssv550597,nssv550585,nssv550599,nssv550579,nssv550581,nssv550596,nssv550593,nssv550580,nssv550587 M 48 2 27 "" JK1051A,JK1058B,JK776,NA10469,NA10494,NA10495,NA10496,NA10967,NA10969,NA10976,NA10979,NA11521,NA11523,NA15724,NA15725,NA15726,NA15728,NA15730,NA15731,NA15732,NA15733,NA17014,NA17015,NA17016,NA17020,NA17051,NA17052,NA17059,P86GA nsv3854 1 16618646 16638076 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3870 M 9 1 0 "" NA12878 esv29948 1 16621632 16931502 CNV loss Wheeler_et_al_2008 18421352 Oligo aCGH,Sequencing essv84187 M 3 0 1 "" WATSON dgv21n67 1 16626581 16780006 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821721,nsv821732 M 31 2 0 "" AK14,NA18547 nsv436652 1 16647957 16756748 OTHER inversion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465873 M 2 0 0 "" NA18505 nsv945794 1 16652033 16656077 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1756589,nssv1756638,nssv1756646,nssv1756602,nssv1756642,nssv1756612,nssv1756588,nssv1756628,nssv1756580,nssv1756627,nssv1756640,nssv1756594,nssv1756583,nssv1756635,nssv1756571,nssv1756633,nssv1756577,nssv1756639,nssv1756576,nssv1756623,nssv1756581,nssv1756597,nssv1756643,nssv1756596,nssv1756586,nssv1756631,nssv1756645,nssv1756615,nssv1756584,nssv1756620,nssv1756574,nssv1756618,nssv1756579,nssv1756619,nssv1756582,nssv1756636,nssv1756649,nssv1756608,nssv1756575,nssv1756621,nssv1756573,nssv1756600,nssv1756644,nssv1756604,nssv1756648,nssv1756622,nssv1756585,nssv1756601,nssv1756641,nssv1756617,nssv1756572,nssv1756647,nssv1756587,nssv1756599,nssv1756578,nssv1756609,nssv1756598,nssv1756625,nssv1756590,nssv1756591,nssv1756603,nssv1756595,nssv1756611,nssv1756613,nssv1756593,nssv1756606,nssv1756626,nssv1756605,nssv1756614,nssv1756607,nssv1756637,nssv1756592,nssv1756634,nssv1756616,nssv1756630,nssv1756570,nssv1756624,nssv1756610,nssv1756629,nssv1756632 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3385518 1 16652570 16662368 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692036 M 185 1 0 "" NA19240 nsv945795 1 16656077 16683533 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753743,nssv1753737,nssv1756669,nssv1756706,nssv1753747,nssv1756676,nssv1756651,nssv1756681,nssv1756663,nssv1753732,nssv1756656,nssv1753757,nssv1756657,nssv1756685,nssv1756654,nssv1753758,nssv1753738,nssv1753759,nssv1756668,nssv1756713,nssv1753740,nssv1756696,nssv1756666,nssv1756700,nssv1753739,nssv1756691,nssv1756664,nssv1756694,nssv1753748,nssv1756682,nssv1756659,nssv1756707,nssv1756662,nssv1756692,nssv1756655,nssv1756711,nssv1756665,nssv1753734,nssv1756661,nssv1753728,nssv1756652,nssv1756705,nssv1756660,nssv1756708,nssv1753745,nssv1756703,nssv1756667,nssv1756683,nssv1756653,nssv1753727,nssv1753744,nssv1753729,nssv1756658,nssv1753736,nssv1753742,nssv1756671,nssv1753750,nssv1756670,nssv1756695,nssv1756715,nssv1756699,nssv1753754,nssv1756704,nssv1756675,nssv1756690,nssv1756697,nssv1753733,nssv1756680,nssv1756677,nssv1756698,nssv1756701,nssv1753753,nssv1756650,nssv1753749,nssv1756687,nssv1756712,nssv1756679,nssv1756710,nssv1756714,nssv1753735,nssv1756674,nssv1756709,nssv1753751,nssv1753755,nssv1753726,nssv1756688,nssv1756673,nssv1753746,nssv1756672,nssv1756689,nssv1756686,nssv1756693,nssv1756702,nssv1756684,nssv1756678,nssv1753756,nssv1753731 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv51e59 1 16662870 16676368 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3391515,esv3415606 M 185 2 0 "" NA19239,NA19240 nsv945573 1 16673492 16676711 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570213,nssv2570241,nssv2570210,nssv2570255,nssv2570279,nssv2570229,nssv2570217,nssv2570233,nssv2570216,nssv2570260,nssv2570203,nssv2570257,nssv2570199,nssv2570248,nssv2570215,nssv2570222,nssv2570273,nssv2570254,nssv2570202,nssv2570227,nssv2570211,nssv2570237,nssv2570207,nssv2570225,nssv2571156,nssv2570258,nssv2570204,nssv2570230,nssv2570200,nssv2570219,nssv2570214,nssv2570228,nssv2570274,nssv2570243,nssv2570197,nssv2570252,nssv2570205,nssv2570218,nssv2570278,nssv2570250,nssv2570276,nssv2570221,nssv2570212,nssv2570281,nssv2571157,nssv2570259,nssv2570206,nssv2570245,nssv2570201,nssv2570251,nssv2570208,nssv2570246,nssv2570277,nssv2570226,nssv2570196,nssv2570238,nssv2570235,nssv2570270,nssv2570268,nssv2570280,nssv2570266,nssv2570234,nssv2570261,nssv2570267,nssv2570256,nssv2570224,nssv2570236,nssv2570262,nssv2570223,nssv2570272,nssv2570247,nssv2570271,nssv2570249,nssv2570269,nssv2570244,nssv2570263,nssv2570239,nssv2570265,nssv2570240,nssv2570232 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv160333 1 16674432 16674742 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178911 M 24 "" esv6890 1 16679694 16726063 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29331 M 1 0 0 "" dgv158n54 1 16681409 16685746 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545644,nsv545646 M 17421 2 0 "" dgv159n54 1 16681409 16706322 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545645,nsv545648,nsv545662 M 17421 3 0 "" nsv545647 1 16681964 16684945 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710847 M 17421 0 1 "" esv2674537 1 16682923 16686318 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5634621,essv5884764,essv5884380,essv6414302,essv5684371,essv5750689,essv6466750,essv5558838,essv6440341,essv5760255,essv6135236,essv5663758,essv5656954,essv5805458,essv6440875,essv5954510,essv5522561,essv6384902,essv5694190,essv5532131,essv6311618,essv6330896,essv6158310,essv5486827,essv5711181,essv5434623,essv5594173,essv5790768,essv5752513,essv5413153,essv5779105,essv5954562,essv6316163,essv5818143,essv5683343,essv5765729,essv5712371,essv6337993,essv5422751,essv5731191,essv6070586,essv6437266,essv6386175,essv5876352,essv6053629,essv6138458,essv5687935,essv6340787,essv6191418,essv6340804,essv5676145,essv6340517,essv5748260,essv5779459,essv6320877,essv5989070,essv6014448,essv6339803,essv6326395,essv6160069,essv5622486,essv5905293,essv6234519,essv5434400,essv5822947,essv5790074,essv5759449,essv5751052,essv6307717,essv5446401,essv6071185,essv6324849,essv5756652,essv5746062,essv5560331,essv6371104,essv5678619,essv6433338,essv6564093,essv6066164,essv5792204,essv5758571,essv6075554,essv5886787,essv5422535,essv5729629,essv5675983,essv5844835,essv5791045,essv6389888,essv5628205,essv5582484,essv5556477,essv6507612,essv5778837,essv6449652,essv5658429,essv5653579,essv6495857,essv5728797,essv5555842,essv6496807,essv5795831,essv5784932,essv5501495,essv5862501,essv6399607,essv6221667,essv6329980,essv5778439,essv5731821,essv6499684,essv5686905,essv6165269,essv6101431,essv6427868,essv6242796,essv6364471,essv5983421,essv6278840,essv6114980,essv6535199,essv6143457,essv5904226,essv6173602,essv5517821,essv6396356,essv6105650,essv6527654,essv5654884,essv5733827,essv5781535,essv6437116,essv5781026,essv5687503,essv6219251,essv6527131,essv5707975,essv5918699,essv6100410,essv6536498,essv6062781,essv6201640,essv5766417,essv5778640,essv5813447,essv5468763,essv5705556,essv6144310,essv5574566,essv6295321,essv5443825,essv5767579,essv5630441,essv6474992,essv6404006,essv5411743,essv5803514,essv5522462,essv6283948,essv5562392,essv6228205,essv6288994,essv6102391,essv6170895,essv5745858,essv5840562,essv6269989,essv5711800,essv5429936,essv5717818,essv6166124,essv5807086,essv6223777,essv6371146,essv5852693,essv6284859,essv6538910,essv5867626,essv6402765,essv6539990,essv5460549,essv6486409,essv6359790,essv6108655,essv6141516,essv5904906,essv5635005,essv6291015,essv5995111,essv6376515,essv5521243,essv6162076,essv5502985,essv6124790,essv5928206,essv5732019,essv5898712,essv5964161,essv6156415,essv5780669,essv6124785,essv5716666,essv5832273,essv6053434,essv5592325,essv5772379,essv6548398,essv6209760,essv5971609,essv6535766,essv6259973,essv5796095,essv6204127,essv5690211,essv5767854,essv6336596,essv6359213,essv6203409,essv5458126,essv6575467,essv5450449,essv6047851,essv5942351,essv6064394,essv5701300,essv5448518,essv5416951,essv5938676,essv5834651,essv6149614,essv6506388,essv5687737,essv5534470,essv5952662,essv6012796,essv6369264,essv5654096,essv5646594,essv6589499,essv6507086,essv6104247,essv5979046,essv5628187,essv5666021,essv6242545,essv6566168,essv5848784,essv6205151,essv5419906,essv6380924,essv6238610,essv6352989,essv6305573,essv5842985,essv6157868,essv5843228,essv5873719,essv6508340,essv5501014,essv5652076,essv6446581,essv5440218,essv5837910,essv5840176,essv5912082,essv5845466,essv5410219,essv5502907,essv5915995,essv6489093,essv6274472,essv5932138,essv6115776,essv5564714,essv6206569,essv6152453,essv5538981,essv6063346,essv5601865,essv6081699,essv5426405,essv6572041,essv5497490,essv6144789,essv6253547,essv6130914,essv6042231,essv6167973,essv6531615,essv6035337,essv6419175,essv5400807,essv6073221,essv5428585,essv6062015,essv5397199,essv6064611,essv5607051,essv6289912,essv6261378,essv5610089,essv6407203,essv6451403,essv5405281,essv5871089,essv5967522,essv6491394,essv5854394,essv5572978,essv5552506,essv6110361,essv5983061,essv6596903,essv6311407,essv5480709,essv5660879,essv6126012,essv6066246,essv5650129,essv5657457,essv6310418,essv5879466,essv5599948,essv5561998,essv6254840,essv5439126,essv5549484,essv5947507,essv5471763,essv6441722,essv6006624,essv5750528,essv6299710,essv5918449,essv5405827,essv6014530,essv6369470,essv6191528,essv5450442,essv5498434,essv6590349,essv6015473,essv6572481,essv6056561,essv6308847,essv6553008,essv6244985,essv6422104,essv6383399,essv6329788,essv6479874,essv5560573,essv6365495,essv5659971,essv5993506,essv5456761,essv6532473,essv6530707,essv6560980,essv6390229,essv6253114,essv5466394,essv5441624,essv5744923,essv6194133,essv5631480,essv5408617,essv6537976,essv5588391,essv6117340,essv5499026,essv5609401,essv6372009,essv6434898,essv5516049,essv6133368,essv5492919,essv6390884,essv5877453,essv5454886,essv5439273,essv5926444,essv5982866,essv5989234,essv5583622,essv6014024,essv6484828,essv5430661,essv6050842,essv6573379,essv5561677,essv5528906,essv6173453,essv5475962,essv5496330,essv5876909,essv5420981,essv5588510,essv5869444,essv6576532,essv6344873,essv6053811,essv6050303,essv6366610,essv6550107,essv6304222,essv6168578,essv6094907,essv6566709,essv6380767,essv6283849,essv5576365,essv6086610,essv6072451,essv6473934,essv6577141,essv5632946,essv6220286,essv6252762,essv6388186,essv6197697,essv5468546,essv6030963,essv6395527,essv6101895,essv6456558,essv5522283,essv5861246,essv6184657,essv6500898,essv6095136,essv6406803,essv6544021,essv5873264,essv5944489,essv6197425,essv6237236,essv5917545,essv5836953,essv5932491,essv6144931,essv5408916,essv5620721,essv5523214,essv6491624,essv5585612,essv6345568,essv5833583,essv5649126,essv6512267,essv6384766,essv6558915,essv5995615,essv6550941,essv5955295,essv6182977,essv6000398,essv6511693,essv6506860,essv5403479,essv5625489,essv6150918,essv5459096,essv6360784,essv5622750,essv5470150,essv5898730,essv5659724,essv6555681,essv6164861,essv6462609,essv6519161,essv6093404,essv6577146,essv5512960,essv6210017,essv5917653,essv6506941,essv5740680,essv6477249,essv6116391,essv5597696 M 1151 0 483 "" HG00096,HG00100,HG00106,HG00111,HG00112,HG00115,HG00116,HG00118,HG00119,HG00120,HG00122,HG00123,HG00124,HG00125,HG00126,HG00127,HG00131,HG00133,HG00136,HG00137,HG00138,HG00141,HG00142,HG00143,HG00146,HG00147,HG00148,HG00149,HG00150,HG00152,HG00153,HG00155,HG00156,HG00157,HG00160,HG00171,HG00173,HG00174,HG00178,HG00179,HG00180,HG00181,HG00185,HG00186,HG00187,HG00188,HG00231,HG00233,HG00236,HG00237,HG00239,HG00242,HG00243,HG00244,HG00245,HG00247,HG00250,HG00251,HG00252,HG00254,HG00258,HG00259,HG00262,HG00265,HG00266,HG00267,HG00269,HG00271,HG00274,HG00275,HG00276,HG00277,HG00280,HG00281,HG00284,HG00306,HG00308,HG00310,HG00315,HG00318,HG00319,HG00320,HG00323,HG00324,HG00325,HG00327,HG00330,HG00331,HG00335,HG00336,HG00338,HG00345,HG00346,HG00359,HG00361,HG00362,HG00366,HG00367,HG00372,HG00373,HG00375,HG00377,HG00380,HG00403,HG00404,HG00418,HG00421,HG00427,HG00428,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00476,HG00478,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00536,HG00537,HG00551,HG00553,HG00556,HG00557,HG00559,HG00560,HG00565,HG00566,HG00577,HG00578,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00592,HG00593,HG00595,HG00596,HG00607,HG00608,HG00610,HG00611,HG00613,HG00614,HG00619,HG00625,HG00626,HG00628,HG00629,HG00635,HG00637,HG00638,HG00651,HG00653,HG00654,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00690,HG00693,HG00698,HG00699,HG00704,HG00707,HG00708,HG00731,HG00734,HG00736,HG00739,HG00740,HG01047,HG01048,HG01060,HG01061,HG01066,HG01067,HG01069,HG01072,HG01073,HG01075,HG01079,HG01083,HG01094,HG01097,HG01101,HG01102,HG01107,HG01110,HG01112,HG01113,HG01124,HG01125,HG01133,HG01136,HG01137,HG01140,HG01148,HG01149,HG01170,HG01171,HG01174,HG01183,HG01187,HG01188,HG01191,HG01197,HG01198,HG01204,HG01254,HG01334,HG01342,HG01351,HG01353,HG01354,HG01356,HG01360,HG01365,HG01366,HG01374,HG01375,HG01377,HG01378,HG01389,HG01390,HG01437,HG01440,HG01441,HG01456,HG01461,HG01465,HG01488,HG01489,HG01492,HG01494,HG01495,HG01498,HG01516,HG01518,HG01519,HG01521,HG01550,HG01551,NA06986,NA06989,NA07048,NA07051,NA07347,NA11843,NA11892,NA11893,NA11920,NA11930,NA11932,NA11994,NA12046,NA12058,NA12154,NA12155,NA12272,NA12273,NA12275,NA12286,NA12341,NA12342,NA12383,NA12399,NA12400,NA12718,NA12763,NA12777,NA18488,NA18516,NA18530,NA18532,NA18533,NA18534,NA18535,NA18538,NA18539,NA18541,NA18543,NA18547,NA18553,NA18559,NA18560,NA18565,NA18566,NA18567,NA18574,NA18602,NA18610,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18626,NA18627,NA18628,NA18630,NA18631,NA18634,NA18853,NA18867,NA18868,NA18940,NA18948,NA18950,NA18956,NA18959,NA18960,NA18961,NA18963,NA18964,NA18977,NA18983,NA18985,NA18986,NA18987,NA18988,NA18989,NA18990,NA18991,NA18999,NA19002,NA19003,NA19004,NA19007,NA19010,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19059,NA19060,NA19062,NA19063,NA19064,NA19065,NA19066,NA19067,NA19068,NA19070,NA19072,NA19074,NA19075,NA19076,NA19077,NA19078,NA19079,NA19080,NA19082,NA19083,NA19084,NA19085,NA19087,NA19088,NA19198,NA19311,NA19312,NA19317,NA19318,NA19324,NA19328,NA19331,NA19332,NA19334,NA19346,NA19359,NA19360,NA19381,NA19382,NA19385,NA19390,NA19395,NA19398,NA19401,NA19429,NA19436,NA19438,NA19440,NA19443,NA19445,NA19446,NA19448,NA19452,NA19453,NA19463,NA19467,NA19469,NA19470,NA19472,NA19625,NA19651,NA19652,NA19655,NA19657,NA19658,NA19660,NA19661,NA19663,NA19664,NA19670,NA19675,NA19676,NA19678,NA19679,NA19682,NA19704,NA19707,NA19717,NA19719,NA19720,NA19722,NA19723,NA19725,NA19726,NA19731,NA19732,NA19746,NA19749,NA19755,NA19756,NA19758,NA19762,NA19773,NA19776,NA19777,NA19782,NA19783,NA19785,NA19786,NA19788,NA19818,NA19835,NA19904,NA19908,NA19920,NA19921,NA20276,NA20289,NA20296,NA20299,NA20344,NA20346,NA20502,NA20503,NA20512,NA20528,NA20529,NA20582,NA20586,NA20752,NA20754,NA20771,NA20774,NA20775,NA20790,NA20797,NA20806,NA20812,NA20818 esv2744475 1 16683000 16686318 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972345,essv6801617,essv6876843,essv6874710,essv6784632,essv6832597,essv6750603,essv6793286,essv6910046,essv6722006,essv6764166,essv6950240,essv6729622,essv6859193,essv6710583,essv6929059,essv6816586,essv6692766,essv6789149,essv6744937,essv6916695,essv6871716,essv6801487 M 96 0 23 "" SSM002,SSM003,SSM004,SSM009,SSM012,SSM015,SSM020,SSM029,SSM037,SSM042,SSM045,SSM047,SSM055,SSM057,SSM063,SSM070,SSM071,SSM073,SSM078,SSM082,SSM088,SSM091,SSM092 nsv957609 1 16683018 16686240 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003694 M 1 0 1 "" BILGI_BIOE dgv2n6 1 16683062 16686266 CNV deletion Mills_et_al_2006 16902084 Sequencing nsv159352,nsv159492 M 24 "" dgv160n54 1 16683109 16685160 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545650,nsv545649 M 17421 0 3 "" dgv161n54 1 16683109 16685746 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545657,nsv545651 M 17421 8 0 "" dgv162n54 1 16683109 16686142 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545658,nsv545652,nsv545660 M 17421 0 4 "" nsv545653 1 16683109 16686200 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710861,nssv710859,nssv710862,nssv710860 M 17421 2 2 "" nsv545654 1 16683109 16706319 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710863 M 17421 0 1 "" dgv163n54 1 16683699 16685441 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545655,nsv545656 M 17421 3 4 "" nsv545659 1 16683855 16685160 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710874 M 17421 0 1 "" nsv545661 1 16684068 16685746 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710877,nssv710878 M 17421 1 1 "" nsv438303 1 16685160 16697805 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv468740,nssv469074,nssv468963,nssv468852 M 269 0 4 "" NA12802,NA12815,NA19138,NA19139 esv33965 1 16685625 16953480 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv97172,essv99013,essv93568,essv100280,essv96937,essv97738,essv94631,essv93286,essv92596,essv97929,essv101061,essv96578,essv101691,essv95690,essv95885,essv92701,essv94915,essv101115,essv94416,essv96504,essv95128,essv98164,essv97457,essv97342,essv95397,essv98340,essv101652,essv94591,essv99198,essv101508,essv100508,essv95548,essv95797,essv93586,essv96287,essv93832,essv93056,essv100427,essv97317 M 51 31 7 "" 21603,21616,21618,21634,21693,21721,21772,21808,21817,21837,21841,21847,21863,21872,21879,21909,21911,21932,21938,21944,22011,22075,22128,22170,22231,22233,22261,22275,22278,22286,22298,22300,22371 esv2547944 1 16686245 16724307 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5366950 M 1 1 0 "" NA18507 nsv945796 1 16686274 16688285 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1753781,nssv1754477,nssv1753775,nssv1753795,nssv1753768,nssv1754425,nssv1754465,nssv1754438,nssv1754468,nssv1753789,nssv1753778,nssv1754442,nssv1753780,nssv1754416,nssv1754470,nssv1754426,nssv1753777,nssv1754419,nssv1753766,nssv1753786,nssv1753776,nssv1754427,nssv1753770,nssv1754454,nssv1754464,nssv1754430,nssv1753773,nssv1754429,nssv1753767,nssv1754435,nssv1754462,nssv1753793,nssv1753769,nssv1754424,nssv1753762,nssv1754437,nssv1753779,nssv1754469,nssv1754461,nssv1754444,nssv1754471,nssv1754447,nssv1754463,nssv1754439,nssv1753772,nssv1753760,nssv1753761,nssv1754472,nssv1753765,nssv1753791,nssv1753764,nssv1754453,nssv1754466,nssv1753792,nssv1753771,nssv1754449,nssv1754433,nssv1753797,nssv1754473,nssv1754421,nssv1753790,nssv1754428,nssv1753787,nssv1754459,nssv1754446,nssv1753782,nssv1754431,nssv1754443,nssv1754452,nssv1754474,nssv1753798,nssv1754418,nssv1754479,nssv1753783,nssv1754451,nssv1753788,nssv1754475,nssv1754436,nssv1754450,nssv1754417,nssv1754457,nssv1754422,nssv1753784,nssv1754455,nssv1754441,nssv1754476,nssv1753799,nssv1754440,nssv1753794,nssv1754460,nssv1754481,nssv1754420,nssv1754482,nssv1754432,nssv1754448,nssv1754458,nssv1754480 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821743 1 16687093 16780006 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1437930 M 31 1 0 "" NA18951 nsv437204 1 16688199 16697805 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467085 M 60 0 1 "" NA18506 nsv821754 1 16688766 16706369 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426377 M 31 1 0 "" AK6 nsv821765 1 16688766 16727416 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1440804 M 31 1 0 "" NA18969 nsv819277 1 16691926 16727446 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418721 M 2 1 0 "" AK1 nsv437205 1 16692625 16709736 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467086 M 60 0 1 "" NA19139 esv3334984 1 16693570 16699268 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692039 M 185 1 0 "" NA19240 nsv437206 1 16697805 16756766 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467087 M 60 0 1 "" NA18863 dgv52e59 1 16702970 16799163 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3418061,esv3350404,esv3377509,esv3347982 M 185 4 0 "" NA12878,NA12891,NA12892,NA19238 esv3419956 1 16703070 16714668 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692043 M 185 1 0 "" NA12892 nsv954849 1 16703106 16798805 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003136 M 1 1 0 "" BILGI_BIOE esv2658050 1 16705346 16705928 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6258973,essv5875088,essv6257129,essv5927601,essv5826742,essv5527619,essv5952061,essv5428228 M 1151 0 8 "" NA18856,NA19138,NA19317,NA19332,NA19446,NA19452,NA19467,NA19681 nsv545663 1 16706322 16719944 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710880,nssv710882,nssv710881 M 17421 0 3 "" dgv164n54 1 16706322 16776915 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545664,nsv545668 M 17421 0 2 "" esv3372391 1 16708270 16765568 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692045 M 185 1 0 "" NA19240 nsv511141 1 16708698 16719961 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625265 M 1 0 1 "" 1 dgv165n54 1 16709105 16727414 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545666,nsv545665 M 17421 0 2 "" nsv545667 1 16718016 16762555 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710886 M 17421 0 1 "" nsv945797 1 16721664 16751031 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754487,nssv1754567,nssv1754578,nssv1754579,nssv1754502,nssv1754524,nssv1754497,nssv1754535,nssv1754491,nssv1754510,nssv1754484,nssv1754542,nssv1754492,nssv1754587,nssv1754576,nssv1754549,nssv1754572,nssv1754509,nssv1754501,nssv1754557,nssv1754503,nssv1754564,nssv1754571,nssv1754562,nssv1754488,nssv1754561,nssv1754498,nssv1754582,nssv1754493,nssv1754551,nssv1754568,nssv1754545,nssv1754485,nssv1754556,nssv1754496,nssv1754530,nssv1754490,nssv1754531,nssv1754574,nssv1754507,nssv1754569,nssv1754553,nssv1754494,nssv1754516,nssv1754495,nssv1754552,nssv1754486,nssv1754534,nssv1754504,nssv1754521,nssv1754499,nssv1754512,nssv1754570,nssv1754539,nssv1754573,nssv1754563,nssv1754589,nssv1754585,nssv1754532,nssv1754528,nssv1754536,nssv1754537,nssv1754581,nssv1754583,nssv1754517,nssv1754520,nssv1754558,nssv1754541,nssv1754526,nssv1754523,nssv1754513,nssv1754546,nssv1754543,nssv1754584,nssv1754559,nssv1754529,nssv1754540,nssv1754519,nssv1754554,nssv1754527,nssv1754580,nssv1754548,nssv1754538,nssv1754586,nssv1754565,nssv1754518,nssv1754550,nssv1754483,nssv1754514,nssv1754575,nssv1754506,nssv1754515,nssv1754547,nssv1754525,nssv1754560,nssv1754505,nssv1754508 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2440890 1 16724307 16727686 CNV gain McKernan_et_al_2009 19546169 Sequencing essv5191715 M 1 1 0 "" NA18507 dgv22n67 1 16724342 16780159 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821776,nsv821787,nsv821798,nsv821810 M 31 4 0 "" AK16,AK18,AK2,AK4 nsv3965 1 16726016 16758547 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3893,nssv5340 M 9 2 0 "" NA12878,NA19129 esv2744497 1 16727806 16728188 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829000,essv6692767 M 96 0 2 "" SSM037,SSM081 esv2744508 1 16727941 16728093 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6692767 M 96 0 1 "" SSM037 esv3423215 1 16731970 16744568 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692048 M 185 1 0 "" NA19239 nsv498664 1 16744928 16746717 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585404 M 9 0 1 "" esv3430695 1 16745670 16759268 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692049 M 185 1 0 "" NA19239 nsv945798 1 16751031 16755915 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754602,nssv1754612,nssv1754591,nssv1754631,nssv1754667,nssv1754661,nssv1754669,nssv1754634,nssv1754596,nssv1754656,nssv1754604,nssv1754625,nssv1754593,nssv1754613,nssv1754597,nssv1754629,nssv1754675,nssv1754637,nssv1754595,nssv1754636,nssv1754607,nssv1754590,nssv1754671,nssv1754620,nssv1754609,nssv1754653,nssv1754677,nssv1754635,nssv1754670,nssv1754622,nssv1754600,nssv1754662,nssv1754594,nssv1754615,nssv1754668,nssv1754660,nssv1754603,nssv1754616,nssv1754592,nssv1754645,nssv1754605,nssv1754641,nssv1754601,nssv1754674,nssv1754598,nssv1754626,nssv1754673,nssv1754659,nssv1754608,nssv1754618,nssv1754606,nssv1754630,nssv1754611,nssv1754628,nssv1754672,nssv1754640,nssv1754649,nssv1754651,nssv1754647,nssv1754666,nssv1754623,nssv1754646,nssv1754642,nssv1754664,nssv1754614,nssv1754639,nssv1754638,nssv1754644,nssv1754619,nssv1754627,nssv1754658,nssv1754663,nssv1754655,nssv1754657,nssv1754650,nssv1754617,nssv1754648,nssv1754652,nssv1754633,nssv1754624 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945799 1 16755915 16799163 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754684,nssv1754681,nssv1754689,nssv1754685,nssv1754679,nssv1754678,nssv1754680,nssv1754682,nssv1754686,nssv1754683,nssv1754688 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv3414600 1 16759770 16761768 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692050 M 185 1 0 "" NA19239 esv3424787 1 16769470 16778868 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692051 M 185 1 0 "" NA19240 esv3397521 1 16779670 16781768 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692052 M 185 1 0 "" NA19240 esv3408780 1 16790570 16792468 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692054 M 185 1 0 "" NA19238 esv3348545 1 16793670 16798868 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692055 M 185 1 0 "" NA19238 nsv945800 1 16849164 16955509 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754691,nssv1755798,nssv1754693,nssv1754716,nssv1754696,nssv1755809,nssv1754704,nssv1755826,nssv1754708,nssv1755806,nssv1754697,nssv1755818,nssv1755835,nssv1755819,nssv1755841,nssv1755833,nssv1754699,nssv1755793,nssv1754707,nssv1755830,nssv1754710,nssv1755843,nssv1754695,nssv1755787,nssv1754700,nssv1755802,nssv1755838,nssv1755820,nssv1754705,nssv1755795,nssv1754703,nssv1755822,nssv1755840,nssv1755790,nssv1755845,nssv1755856,nssv1754692,nssv1755855,nssv1755837,nssv1754712,nssv1754702,nssv1754717,nssv1754701,nssv1754721,nssv1755842,nssv1755796,nssv1755844,nssv1755831,nssv1754711,nssv1755853,nssv1754694,nssv1755801,nssv1755839,nssv1755791,nssv1754706,nssv1755815,nssv1755823,nssv1755846,nssv1754715,nssv1755848,nssv1755821,nssv1754722,nssv1755824,nssv1755799,nssv1755807,nssv1755788,nssv1755834,nssv1755828,nssv1755789,nssv1754713,nssv1755817,nssv1755797,nssv1755794,nssv1754690,nssv1754718,nssv1755786,nssv1755810,nssv1755804,nssv1755812,nssv1755829,nssv1755800,nssv1754723,nssv1755808,nssv1754714,nssv1755854,nssv1755805,nssv1755813,nssv1755827,nssv1755852,nssv1754719,nssv1755851,nssv1755850,nssv1755816,nssv1755832,nssv1755785,nssv1755849,nssv1755811 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv26111 1 16849227 16955258 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv11657,esv20295,esv16106,esv15416,esv18904,esv15181,esv11182,esv20155 M 40 16 11 "" NA07037,NA07045,NA11894,NA11993,NA12156,NA12414,NA12878,NA15510,NA18502,NA18505,NA18511,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19257 nsv821037 1 16849227 16955258 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420258 M 1 1 0 "" NA10851 esv3422357 1 16849370 16854068 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692056 M 185 1 0 "" NA12891 dgv53e59 1 16849370 16855968 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3353084,esv3366548,esv3328740,esv3333777,esv3367003 M 185 5 0 "" NA12878,NA12892,NA19238,NA19239,NA19240 nsv545669 1 16850369 16868685 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710888 M 17421 0 1 "" nsv834258 1 16850864 16954454 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443395,nssv1443407,nssv1443418 M 95 0 3 "" nsv834269 1 16855283 17038531 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443429,nssv1443440,nssv1443451,nssv1443462,nssv1443473,nssv1443484,nssv1443506,nssv1443529,nssv1443518,nssv1443562,nssv1443540,nssv1443551,nssv1443573,nssv1443584,nssv1443595,nssv1443617,nssv1443629,nssv1443640,nssv1443495,nssv1443651,nssv1443662,nssv1443606 M 95 0 22 "" dgv166n54 1 16856620 16955930 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545670,nsv545671 M 17421 3 5 "" nsv545672 1 16856620 16973488 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710897 M 17421 0 1 "" dgv54e59 1 16856670 16949868 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3380286,esv3406942 M 185 2 0 "" NA19239,NA19240 esv3354837 1 16859970 16862468 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692063 M 185 1 0 "" NA19238 nsv954851 1 16863206 16867105 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003138 M 1 1 0 "" BILGI_BIOE esv990069 1 16864367 16935752 CNV loss Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586006 M 3 0 1 "" HuRef dgv55e59 1 16868170 16879168 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3326251,esv3329394 M 185 2 0 "" NA12878,NA19238 nsv442727 1 16868660 16935752 CNV gain McCarroll_et_al_2008 18776908 SNP array nssv1617605,nssv1617507,nssv1617453,nssv1617489,nssv1617542,nssv1617424,nssv1617519,nssv1617631,nssv1617599,nssv1617486,nssv1617406,nssv1617513,nssv1617446,nssv1617560,nssv1617534,nssv1617456,nssv1617606,nssv1617437,nssv1617607,nssv1617571,nssv1617426,nssv1617518,nssv1617457,nssv1617570,nssv1617429,nssv1617452,nssv1617506,nssv1617572,nssv1617562,nssv1617532,nssv1617573,nssv1617585,nssv1617622,nssv1617577,nssv1617611,nssv1617618,nssv1617616,nssv1617482,nssv1617435,nssv1617459,nssv1617624,nssv1617576,nssv1617432,nssv1617565,nssv1617581,nssv1617471,nssv1617430,nssv1617416,nssv1617464,nssv1617564,nssv1617454,nssv1617552,nssv1617557,nssv1617440,nssv1617604,nssv1617443,nssv1617427,nssv1617539,nssv1617417,nssv1617410,nssv1617455,nssv1617615,nssv1617553,nssv1617516,nssv1617511,nssv1617439,nssv1617594,nssv1617412,nssv1617621,nssv1617418,nssv1617629,nssv1617438,nssv1617556,nssv1617554,nssv1617575,nssv1617549,nssv1617612,nssv1617441,nssv1617608,nssv1617523,nssv1617620,nssv1617473,nssv1617505,nssv1617520,nssv1617593,nssv1617610,nssv1617476,nssv1617619,nssv1617574,nssv1617598,nssv1617431,nssv1617492,nssv1617415,nssv1617617,nssv1617463,nssv1617419,nssv1617531,nssv1617630,nssv1617544,nssv1617493,nssv1617548,nssv1617609,nssv1617600,nssv1617527,nssv1617550,nssv1617402,nssv1617517,nssv1617567,nssv1617494,nssv1617500,nssv1617451,nssv1617450,nssv1617501,nssv1617529,nssv1617551,nssv1617561,nssv1617626,nssv1617587,nssv1617559,nssv1617582,nssv1617462,nssv1617445,nssv1617588,nssv1617590,nssv1617541,nssv1617583,nssv1617467,nssv1617543,nssv1617546,nssv1617428,nssv1617555,nssv1617545,nssv1617461,nssv1617484,nssv1617528,nssv1617592,nssv1617533,nssv1617498,nssv1617405,nssv1617603,nssv1617421,nssv1617477,nssv1617483,nssv1617524,nssv1617434,nssv1617474,nssv1617449,nssv1617466,nssv1617413,nssv1617509,nssv1617475,nssv1617496,nssv1617623,nssv1617460,nssv1617522,nssv1617468,nssv1617535,nssv1617526,nssv1617578,nssv1617423,nssv1617479,nssv1617407,nssv1617497,nssv1617515,nssv1617538,nssv1617584,nssv1617504,nssv1617586,nssv1617481,nssv1617596,nssv1617512,nssv1617485,nssv1617530,nssv1617601,nssv1617448,nssv1617563,nssv1617632,nssv1617597,nssv1617508,nssv1617566,nssv1617537,nssv1617411,nssv1617540,nssv1617589,nssv1617420,nssv1617470,nssv1617409,nssv1617433,nssv1617404,nssv1617488,nssv1617627,nssv1617465,nssv1617490,nssv1617510,nssv1617579,nssv1617444,nssv1617595,nssv1617408,nssv1617487,nssv1617568,nssv1617495,nssv1617472,nssv1617521,nssv1617628,nssv1617422,nssv1617442,nssv1617499,nssv1617478 M 270 208 0 "" NA06985,NA06991,NA07022,NA07029,NA07034,NA07048,NA07345,NA10835,NA10838,NA10846,NA10847,NA10851,NA10854,NA10855,NA10857,NA10860,NA10861,NA10863,NA11831,NA11832,NA11840,NA11992,NA11994,NA12003,NA12004,NA12005,NA12006,NA12044,NA12056,NA12057,NA12144,NA12154,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12717,NA12740,NA12751,NA12752,NA12753,NA12760,NA12762,NA12812,NA12813,NA12814,NA12864,NA12865,NA12872,NA12873,NA12874,NA12875,NA18500,NA18501,NA18502,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18515,NA18516,NA18517,NA18521,NA18522,NA18524,NA18526,NA18529,NA18532,NA18537,NA18540,NA18542,NA18545,NA18550,NA18555,NA18558,NA18561,NA18562,NA18563,NA18564,NA18566,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18594,NA18603,NA18605,NA18612,NA18620,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18862,NA18870,NA18871,NA18872,NA18912,NA18913,NA18914,NA18942,NA18943,NA18944,NA18945,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18997,NA18998,NA18999,NA19000,NA19005,NA19007,NA19012,NA19093,NA19094,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19119,NA19120,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19172,NA19192,NA19193,NA19194,NA19200,NA19201,NA19202,NA19203,NA19204,NA19205,NA19206,NA19208,NA19209,NA19211,NA19221,NA19222,NA19223,NA19239,NA19240 nsv954852 1 16872206 16882805 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003139 M 1 1 0 "" BILGI_BIOE dgv23n67 1 16881082 16946112 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821832,nsv821821 M 31 2 0 "" NA18547,NA18592 nsv433184 1 16881956 16936882 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463065 M 9 0 1 "" NA12156 esv29988 1 16882837 16925672 CNV loss Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv84227 M 2 0 1 "" HuRef esv2421455 1 16883108 16941001 CNV duplication Altshuler_et_al_2010 20811451 SNP array essv5155913,essv5032469,essv5018174,essv5059549,essv5138642,essv5041169,essv5112549,essv5057016,essv5066540,essv5037484,essv5093178,essv5064110,essv5089240,essv5106741,essv5105808,essv5118129,essv5010067,essv5109355,essv5026732,essv5160036,essv5114019,essv5056874,essv5009199,essv5061673,essv5048257,essv5041980,essv5143686,essv5105480,essv5114680,essv5111876,essv5013009,essv5056144,essv5119957,essv5053255,essv5084910,essv5090637,essv5130759,essv5099069,essv5127738,essv5046634,essv5091838,essv5027238,essv5079526,essv5148716,essv5062068,essv5096160,essv5136215,essv5103771,essv5146488,essv5063859,essv5130484,essv5137608,essv5137317,essv5107317,essv5115989,essv5119277,essv5014507,essv5069984,essv5033589,essv5084379,essv5121588,essv5124305,essv5047004,essv5087882,essv5158627,essv5033120,essv5097936,essv5096769,essv5029426,essv5008791,essv5086652,essv5106798,essv5007786,essv5046901,essv5071444,essv5134265,essv5129917,essv5115978,essv5021628,essv5069059,essv5070319,essv5099962,essv5047460,essv5086003,essv5049144,essv5122188,essv5102014,essv5129387,essv5035516,essv5030022,essv5084952,essv5048297,essv5147205,essv5081290,essv5020252,essv5026459,essv5034553,essv5082948,essv5016348,essv5006490,essv5083720,essv5006486,essv5100525,essv5120699,essv5085767,essv5017352,essv5019386,essv5060750,essv5141584,essv5051338,essv5103961,essv5041206,essv5120412,essv5043975,essv5110707,essv5065850,essv5032089,essv5054679,essv5065477,essv5054086,essv5077283,essv5032170,essv5111824,essv5124332,essv5042829,essv5031308,essv5029838,essv5101917,essv5032316,essv5121813,essv5111803,essv5018172,essv5128068,essv5139328,essv5154202,essv5064272,essv5149086,essv5076597,essv5037077,essv5155101,essv5103759,essv5119538,essv5090959,essv5061003,essv5152984,essv5102550,essv5117088,essv5033382,essv5028158,essv5057556,essv5107567,essv5113257,essv5077016,essv5136376,essv5038223,essv5147986,essv5037942,essv5124020,essv5106431,essv5145666,essv5020012,essv5040787,essv5051588,essv5067874,essv5032838,essv5021982,essv5010456,essv5155596,essv5105600,essv5054766,essv5148378,essv5139461,essv5057255,essv5009191,essv5123038,essv5089140,essv5016066,essv5004269,essv5039437,essv5071647,essv5056899,essv5143147,essv5108682,essv5050841,essv5153944,essv5157797,essv5128349,essv5147022,essv5096758,essv5022891,essv5037850,essv5127759,essv5089873,essv5153097,essv5135966,essv5148185,essv5042763,essv5103479,essv5103826,essv5131352,essv5007479,essv5159082,essv5034838,essv5110272,essv5105069,essv5151178,essv5079108,essv5075932,essv5050331,essv5060130,essv5112080,essv5060841,essv5159525,essv5016821,essv5048230,essv5076924,essv5076127,essv5015485,essv5124242,essv5157953,essv5009278,essv5159099,essv5047389,essv5052144,essv5143625,essv5031423,essv5091243,essv5085316,essv5086951,essv5030592,essv5139651,essv5019668,essv5065387,essv5051479,essv5048475,essv5026401,essv5044987,essv5045712,essv5091035,essv5101695,essv5084304,essv5002204,essv5157199,essv5121988,essv5088248,essv5117492,essv5007344,essv5160920,essv5093849,essv5024780,essv5099230,essv5023433,essv5107641,essv5086692,essv5128868,essv5054193,essv5117269,essv5152822,essv5026386,essv5085304,essv5010139,essv5016691,essv5134163,essv5059367,essv5012897,essv5130918,essv5007504,essv5138662,essv5078913,essv5003156,essv5098676,essv5130731,essv5019753,essv5060943,essv5002508,essv5045249,essv5044592,essv5136646,essv5091443,essv5065965,essv5160258,essv5035906,essv5131593,essv5016687,essv5048632,essv5127109,essv5103126,essv5151782,essv5082199,essv5033107,essv5113637,essv5025020,essv5046441,essv5007467,essv5024608,essv5055587,essv5039517,essv5091949,essv5147309,essv5103778,essv5038858,essv5104936,essv5014694,essv5064371,essv5089028,essv5140684,essv5133752,essv5006467,essv5146556,essv5055154,essv5082429,essv5096269,essv5079911,essv5049281,essv5085572,essv5124993,essv5111040,essv5092709,essv5057234,essv5008077,essv5139551,essv5117284,essv5141036,essv5133268,essv5064954,essv5125769,essv5147504,essv5133749,essv5117717,essv5142986,essv5047731,essv5085246,essv5115530,essv5115299,essv5090302,essv5152854,essv5116384,essv5143890,essv5075589,essv5022534,essv5134482,essv5122841,essv5156750,essv5102812,essv5117231,essv5103855,essv5123426,essv5037567,essv5021994,essv5095836,essv5039612,essv5079291,essv5058964,essv5040406,essv5096754,essv5030772,essv5021138,essv5027457,essv5084328,essv5146659,essv5144065,essv5024108,essv5123076,essv5017332,essv5019727,essv5048317,essv5008849,essv5037760,essv5098055,essv5030387,essv5132756,essv5080865,essv5054059,essv5094810,essv5102792,essv5125345,essv5128437,essv5072970,essv5130528,essv5110166,essv5157006,essv5002999,essv5075234,essv5086014,essv5070553,essv5075073,essv5072037,essv5074466,essv5074373,essv5152392,essv5072067,essv5007503,essv5012961,essv5109088,essv5030913,essv5140347,essv5036548,essv5109258,essv5040328,essv5046748,essv5156813,essv5003922,essv5112366,essv5030042,essv5051017,essv5133688,essv5105240,essv5150465,essv5104802,essv5058624,essv5088695,essv5017379,essv5121029,essv5090795,essv5035883,essv5127846,essv5103379,essv5026844,essv5101426,essv5097921,essv5098012,essv5142856,essv5009673,essv5092816,essv5065791,essv5062035,essv5160797,essv5054318,essv5053715,essv5134440,essv5038258,essv5028001,essv5061412,essv5098315,essv5056651,essv5141602,essv5148048,essv5123097,essv5158152,essv5024519,essv5058603,essv5045814,essv5041804,essv5081157,essv5052108,essv5003961,essv5119235,essv5054964,essv5121456,essv5026768,essv5048396,essv5117383,essv5095343,essv5146549,essv5019407,essv5077378,essv5016121,essv5117045,essv5030908,essv5017890,essv5145356,essv5114344,essv5008007,essv5065233,essv5135695,essv5076075,essv5105050,essv5043135,essv5043100,essv5121078,essv5016987,essv5126766,essv5048039,essv5057304,essv5075339,essv5136757,essv5010821,essv5107122,essv5101825,essv5039926,essv5086531,essv5098036,essv5145780,essv5058411,essv5120827,essv5052392,essv5026223,essv5138727,essv5083100,essv5095375,essv5123032,essv5135140,essv5121681,essv5104214,essv5076373,essv5102689,essv5160566,essv5041116,essv5047063,essv5045172,essv5024133,essv5099314,essv5028085,essv5060546,essv5071124,essv5028804,essv5130948,essv5076471,essv5051979,essv5160425,essv5014810,essv5111478,essv5072259,essv5045959,essv5083668,essv5094626,essv5027419,essv5110435,essv5078545,essv5030657,essv5080701,essv5136108,essv5064258,essv5139716,essv5079835,essv5088205,essv5118820,essv5051893,essv5157609,essv5153278,essv5058107,essv5126792,essv5159156,essv5123196,essv5051919,essv5017049,essv5105512,essv5103322,essv5036337,essv5101186,essv5058801,essv5006977,essv5157311,essv5055357,essv5094689,essv5126598,essv5055429,essv5021274,essv5086846,essv5016117,essv5114829,essv5021954,essv5081843,essv5056012,essv5002555,essv5027231,essv5014551,essv5063794,essv5147835,essv5007779,essv5014180,essv5095772,essv5112594,essv5092468,essv5129159,essv5092744,essv5049316,essv5081270,essv5095894,essv5133449,essv5152305,essv5084521,essv5071772,essv5035947,essv5122630,essv5081263,essv5111201,essv5093717,essv5149295,essv5027775,essv5088408,essv5083755,essv5063672,essv5093740,essv5008648,essv5046536,essv5125865,essv5135969,essv5130485,essv5072329,essv5114395,essv5129041,essv5127811,essv5110120,essv5133460,essv5129083,essv5090458,essv5100613,essv5042364,essv5008000,essv5109059,essv5049633,essv5119616,essv5056674,essv5048138,essv5036913,essv5020880,essv5012630,essv5006182,essv5097100,essv5097885,essv5134195,essv5078646,essv5105478,essv5089151,essv5059149,essv5117997,essv5009030,essv5114338,essv5152363,essv5048413,essv5003158,essv5116575,essv5069245,essv5113041,essv5083511,essv5045122,essv5117115,essv5096519,essv5083861,essv5146796,essv5065875,essv5032435,essv5006951,essv5005212,essv5094424,essv5071137,essv5158666,essv5047555,essv5119346,essv5144538,essv5011869,essv5030388,essv5002754,essv5007838,essv5058264,essv5124285,essv5134811,essv5052461,essv5085115,essv5115933,essv5142022,essv5159889,essv5113019,essv5006519,essv5004085,essv5059805,essv5066867,essv5053053,essv5148464,essv5099089,essv5097008,essv5115772,essv5104217,essv5068855,essv5018347,essv5149250,essv5051004,essv5114280,essv5041786,essv5040865,essv5004154,essv5006744,essv5039821,essv5065761,essv5041587,essv5064028,essv5051739,essv5040075,essv5079599,essv5032473,essv5078527,essv5121490,essv5114037,essv5150313,essv5020555,essv5078659,essv5155086,essv5116817,essv5087089,essv5130675,essv5073684,essv5113457,essv5046246,essv5152014,essv5028561,essv5081176,essv5065490,essv5084771,essv5100179,essv5053913,essv5098226,essv5029256,essv5107685,essv5015131,essv5067082,essv5022960,essv5045942,essv5128315,essv5044837,essv5114781,essv5130594,essv5047898,essv5106194,essv5070821,essv5042625,essv5066756,essv5047562,essv5084421,essv5123887,essv5050835,essv5075151,essv5115411,essv5157378,essv5153800,essv5146134,essv5122596,essv5088681,essv5015446,essv5118836,essv5064411,essv5004468,essv5064968,essv5071800,essv5032394,essv5086298,essv5031356,essv5136415,essv5017794,essv5065940,essv5133655,essv5135041,essv5087014,essv5075006,essv5029931,essv5074418,essv5142604,essv5134308,essv5004444,essv5101859,essv5051143,essv5106735,essv5135370,essv5103286,essv5065977,essv5093977,essv5145900,essv5125312,essv5085965,essv5022653,essv5113280,essv5009826,essv5055998,essv5031413,essv5143110,essv5060560,essv5077558,essv5136324,essv5127120,essv5061190,essv5042300,essv5150991,essv5018177,essv5002576,essv5025494,essv5130303,essv5110538,essv5062523,essv5157375,essv5056267,essv5021931,essv5095692,essv5021911,essv5076493,essv5047270,essv5096648,essv5117452,essv5069410,essv5147413,essv5018074,essv5044467,essv5050900,essv5090873,essv5079342,essv5022740,essv5019224,essv5076785,essv5055362,essv5156413,essv5028380,essv5133764,essv5063353,essv5101502,essv5059015,essv5092490,essv5104436,essv5092788,essv5108762,essv5083014,essv5005544,essv5011659,essv5112506,essv5090798,essv5039355,essv5106778,essv5151985,essv5096642,essv5004579,essv5044898,essv5159643,essv5106448,essv5004735,essv5066068,essv5014326,essv5099226,essv5104607,essv5080108,essv5043721,essv5105910,essv5103415,essv5071290,essv5088822,essv5128838,essv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M 1184 850 0 "" NA06984,NA06985,NA06986,NA06991,NA06995,NA06997,NA07000,NA07014,NA07022,NA07031,NA07045,NA07051,NA07345,NA07346,NA07347,NA07349,NA07435,NA10835,NA10838,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10852,NA10853,NA10854,NA10855,NA10861,NA10863,NA10865,NA11831,NA11832,NA11840,NA11843,NA11891,NA11892,NA11918,NA11920,NA11931,NA11992,NA11994,NA12003,NA12006,NA12044,NA12045,NA12056,NA12057,NA12144,NA12154,NA12234,NA12248,NA12264,NA12273,NA12275,NA12282,NA12286,NA12287,NA12335,NA12340,NA12341,NA12342,NA12344,NA12347,NA12375,NA12383,NA12399,NA12400,NA12413,NA12489,NA12708,NA12740,NA12748,NA12749,NA12751,NA12752,NA12753,NA12760,NA12762,NA12763,NA12766,NA12776,NA12778,NA12812,NA12813,NA12814,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12865,NA12872,NA12873,NA12874,NA12875,NA12877,NA12889,NA12890,NA17965,NA17966,NA17967,NA17968,NA17969,NA17970,NA17974,NA17975,NA17976,NA17977,NA17980,NA17981,NA17982,NA17983,NA17986,NA17987,NA17988,NA17989,NA17990,NA17993,NA17995,NA17996,NA17997,NA17998,NA17999,NA18101,NA18102,NA18105,NA18106,NA18107,NA18108,NA18109,NA18112,NA18117,NA18118,NA18120,NA18122,NA18124,NA18125,NA18128,NA18129,NA18131,NA18132,NA18133,NA18134,NA18135,NA18136,NA18138,NA18139,NA18140,NA18144,NA18146,NA18150,NA18152,NA18153,NA18155,NA18156,NA18157,NA18158,NA18159,NA18160,NA18161,NA18166,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18505,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18515,NA18516,NA18517,NA18518,NA18520,NA18524,NA18526,NA18529,NA18532,NA18534,NA18537,NA18542,NA18543,NA18544,NA18545,NA18546,NA18548,NA18550,NA18555,NA18557,NA18558,NA18559,NA18561,NA18562,NA18563,NA18564,NA18566,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18596,NA18597,NA18599,NA18602,NA18603,NA18605,NA18610,NA18612,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18620,NA18622,NA18623,NA18624,NA18626,NA18627,NA18628,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18639,NA18640,NA18641,NA18642,NA18645,NA18647,NA18670,NA18682,NA18685,NA18689,NA18694,NA18704,NA18740,NA18745,NA18747,NA18748,NA18749,NA18854,NA18855,NA18857,NA18859,NA18860,NA18862,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18910,NA18911,NA18912,NA18914,NA18916,NA18923,NA18924,NA18925,NA18930,NA18933,NA18935,NA18939,NA18942,NA18943,NA18944,NA18945,NA18946,NA18947,NA18948,NA18949,NA18951,NA18952,NA18953,NA18954,NA18955,NA18956,NA18957,NA18959,NA18960,NA18961,NA18963,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18976,NA18977,NA18978,NA18979,NA18980,NA18981,NA18987,NA18990,NA18991,NA18993,NA18994,NA18997,NA18999,NA19000,NA19001,NA19002,NA19005,NA19007,NA19010,NA19027,NA19038,NA19044,NA19046,NA19054,NA19056,NA19059,NA19062,NA19063,NA19065,NA19066,NA19067,NA19068,NA19070,NA19072,NA19074,NA19077,NA19079,NA19080,NA19081,NA19083,NA19084,NA19085,NA19086,NA19088,NA19093,NA19094,NA19095,NA19097,NA19098,NA19099,NA19101,NA19102,NA19103,NA19114,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19131,NA19132,NA19137,NA19138,NA19139,NA19140,NA19141,NA19142,NA19144,NA19146,NA19149,NA19150,NA19151,NA19152,NA19153,NA19161,NA19172,NA19175,NA19176,NA19179,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19203,NA19204,NA19206,NA19208,NA19209,NA19211,NA19213,NA19214,NA19215,NA19221,NA19222,NA19223,NA19224,NA19225,NA19226,NA19235,NA19236,NA19240,NA19247,NA19248,NA19249,NA19256,NA19257,NA19258,NA19307,NA19308,NA19309,NA19310,NA19311,NA19313,NA19315,NA19316,NA19317,NA19318,NA19324,NA19327,NA19328,NA19332,NA19334,NA19346,NA19347,NA19350,NA19352,NA19359,NA19360,NA19372,NA19373,NA19374,NA19376,NA19377,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19391,NA19393,NA19394,NA19396,NA19398,NA19399,NA19428,NA19429,NA19430,NA19431,NA19434,NA19435,NA19436,NA19437,NA19438,NA19439,NA19440,NA19443,NA19444,NA19445,NA19448,NA19451,NA19452,NA19456,NA19457,NA19463,NA19467,NA19468,NA19471,NA19474,NA19625,NA19649,NA19650,NA19651,NA19653,NA19657,NA19658,NA19659,NA19662,NA19663,NA19664,NA19665,NA19675,NA19677,NA19678,NA19680,NA19685,NA19686,NA19703,NA19704,NA19705,NA19708,NA19712,NA19713,NA19714,NA19719,NA19720,NA19721,NA19723,NA19724,NA19726,NA19748,NA19750,NA19751,NA19755,NA19756,NA19759,NA19761,NA19762,NA19770,NA19771,NA19772,NA19773,NA19777,NA19789,NA19794,NA19796,NA19828,NA19834,NA19835,NA19836,NA19901,NA19902,NA19904,NA19914,NA19915,NA19916,NA19917,NA19918,NA19921,NA19982,NA19983,NA20126,NA20129,NA20279,NA20282,NA20284,NA20287,NA20288,NA20289,NA20290,NA20291,NA20295,NA20297,NA20300,NA20301,NA20302,NA20317,NA20319,NA20322,NA20332,NA20333,NA20334,NA20335,NA20336,NA20337,NA20341,NA20347,NA20348,NA20349,NA20350,NA20356,NA20357,NA20358,NA20363,NA20502,NA20505,NA20506,NA20508,NA20510,NA20512,NA20517,NA20518,NA20521,NA20522,NA20525,NA20527,NA20528,NA20529,NA20534,NA20540,NA20541,NA20542,NA20543,NA20581,NA20582,NA20586,NA20588,NA20752,NA20753,NA20754,NA20755,NA20756,NA20757,NA20758,NA20759,NA20761,NA20765,NA20766,NA20769,NA20771,NA20772,NA20774,NA20775,NA20778,NA20783,NA20785,NA20786,NA20792,NA20795,NA20796,NA20799,NA20800,NA20802,NA20803,NA20804,NA20805,NA20806,NA20807,NA20808,NA20809,NA20810,NA20811,NA20812,NA20813,NA20815,NA20816,NA20818,NA20819,NA20826,NA20828,NA20846,NA20849,NA20851,NA20853,NA20854,NA20856,NA20858,NA20866,NA20869,NA20870,NA20871,NA20872,NA20873,NA20883,NA20885,NA20887,NA20888,NA20890,NA20891,NA20892,NA20894,NA20906,NA20907,NA20911,NA21086,NA21088,NA21090,NA21091,NA21092,NA21094,NA21097,NA21098,NA21099,NA21102,NA21103,NA21106,NA21108,NA21109,NA21113,NA21115,NA21118,NA21119,NA21142,NA21143,NA21144,NA21295,NA21297,NA21300,NA21301,NA21302,NA21303,NA21307,NA21309,NA21316,NA21318,NA21333,NA21336,NA21344,NA21352,NA21353,NA21355,NA21357,NA21359,NA21360,NA21361,NA21362,NA21363,NA21364,NA21365,NA21366,NA21368,NA21370,NA21371,NA21378,NA21379,NA21381,NA21382,NA21383,NA21384,NA21385,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21402,NA21403,NA21404,NA21405,NA21408,NA21414,NA21415,NA21418,NA21421,NA21423,NA21435,NA21436,NA21439,NA21440,NA21441,NA21447,NA21448,NA21451,NA21454,NA21455,NA21457,NA21473,NA21476,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21489,NA21490,NA21491,NA21493,NA21494,NA21509,NA21512,NA21513,NA21517,NA21520,NA21521,NA21522,NA21523,NA21525,NA21526,NA21527,NA21528,NA21529,NA21574,NA21575,NA21576,NA21577,NA21580,NA21582,NA21587,NA21596,NA21597,NA21600,NA21601,NA21608,NA21611,NA21614,NA21615,NA21616,NA21617,NA21631,NA21632,NA21634,NA21635,NA21648,NA21678,NA21682,NA21686,NA21689,NA21693,NA21716,NA21717,NA21718,NA21723,NA21733,NA21738,NA21739,NA21768,NA21776,NA21784,NA21825 nsv545673 1 16887388 16891983 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710898 M 17421 0 1 "" nsv834280 1 16888218 17123006 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443741,nssv1443706,nssv1443673,nssv1443684,nssv1443695,nssv1443717,nssv1443728,nssv1443752 M 95 0 8 "" nsv437207 1 16890770 16930807 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467088 M 60 0 1 "" NA19208 dgv167n54 1 16892778 16924078 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545674,nsv545675 M 17421 0 2 "" nsv954853 1 16895606 16905005 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003140 M 1 1 0 "" BILGI_BIOE dgv24n67 1 16896197 16946140 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821843,nsv821876,nsv821887 M 31 3 0 "" NA18552,NA18566,NA18947 dgv168n54 1 16898769 16932783 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545676,nsv545679 M 17421 0 2 "" dgv56e59 1 16902370 16903868 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3378698,esv3351872 M 185 2 0 "" NA12878,NA12891 dgv25n67 1 16903319 16934803 CNV gain Park_et_al_2010 20364138 Oligo aCGH nsv821854,nsv821865,nsv821898 M 31 3 0 "" AK2,NA18537,NA18972 nsv545677 1 16903496 16916236 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710902 M 17421 0 1 "" esv3431776 1 16906070 16908168 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692070 M 185 1 0 "" NA12891 esv3342657 1 16906601 16907351 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740943 M 185 1 0 "" NA19240 nsv545678 1 16906708 16921023 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710906,nssv710904,nssv710905,nssv710903 M 17421 0 4 "" esv3406906 1 16907070 16908768 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692071 M 185 1 0 "" NA12878 nsv508947 1 16909817 17011115 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619776,nssv623774 M 4 2 0 "" NA10860,NA18994 dgv169n54 1 16912199 16930807 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545680,nsv545683 M 17421 0 2 "" dgv170n54 1 16912199 16937870 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545685,nsv545684,nsv545682,nsv545681 M 17421 0 4 "" dgv171n54 1 16919140 16936882 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545689,nsv545688,nsv545687,nsv545686 M 17421 0 9 "" nsv482201 1 16921950 16972979 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558562 M 1 1 0 "" KB1 nsv437208 1 16922390 16941834 CNV loss Conrad_et_al_2006 16327808 Oligo aCGH,SNP array nssv467089 M 60 0 1 "" NA19240 nsv438355 1 16927333 16938871 CNV loss McCarroll_et_al_2006 16468122 SNP array nssv469407,nssv469296,nssv469185,nssv469518 M 269 0 4 "" NA19207,NA19208,NA19238,NA19240 nsv471438 1 16928200 16954743 CNV gain Alkan_et_al_2009 19718026 Oligo aCGH,Sequencing nssv548289,nssv548311,nssv548300 M 3 3 0 "" JDW,NA18507,YH dgv57e59 1 16944270 16945868 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3347572,esv3452155,esv3375285 M 185 3 0 "" NA12878,NA12891,NA12892 nsv957534 1 16951954 16954020 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003468 M 1 0 1 "" BILGI_BIOE esv3343101 1 16953470 16954268 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692076 M 185 1 0 "" NA12891 nsv954854 1 16961106 17013905 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003141 M 1 0 1 "" BILGI_BIOE esv3360661 1 17009388 17009410 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863677 M 185 1 0 "" NA12005 esv2662800 1 17034506 17036842 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6493736,essv5534174,essv6458674,essv6032694,essv5515375 M 1151 0 5 "" HG00151,HG01066,HG01174,HG01488,NA19723 nsv545690 1 17040376 17159158 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710923 M 17421 1 0 "" esv2422314 1 17080898 17216627 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161240 M 181 1 0 "" ND01703 nsv460662 1 17086006 17159056 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537201 M 1557 0 1 "" HGDP00896 nsv545691 1 17086006 17159056 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173787 M 17421 0 1 "" HGDP00896 esv3305460 1 17114628 17114629 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7761430,essv7760271,essv7756230,essv7743175,essv7752737,essv7750186,essv7749234,essv7746912,essv7744319,essv7749714,essv7741691,essv7756324,essv7762283,essv7755485,essv7758201,essv7740897,essv7754097,essv7744629 M 185 18 0 "" NA18486,NA18489,NA18498,NA18499,NA18502,NA18505,NA18522,NA18853,NA18856,NA18870,NA18912,NA18916,NA19093,NA19108,NA19116,NA19137,NA19138,NA19239 esv3310333 1 17114637 17114638 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7838900,essv7836931,essv7837611 M 185 3 0 "" NA19238,NA19239,NA19240 esv2422211 1 17126427 17158004 CNV duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP array essv5161296 M 181 1 0 "" ND03833 esv2762267 1 17159086 17187357 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007744 M 1109 0 1 "" SW_1378 esv2627134 1 17165775 17166555 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5378317 M 1 1 0 "" NA18507 nsv512720 1 17166188 17167076 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625345 M 1 1 0 "" 1 esv1174577 1 17166219 17166219 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4070341 M 2 1 0 "" HuRef nsv834291 1 17204322 17350217 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443763,nssv1443774 M 95 2 0 "" esv1489199 1 17208597 17208597 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3883314 M 2 1 0 "" HuRef nsv954861 1 17215306 17236905 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003142 M 1 0 1 "" BILGI_BIOE esv2762134 1 17223626 17226380 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005180 M 1109 0 1 "" RW_0111 nsv470700 1 17225448 17268097 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547713 M 443 0 1 "" HGDP00298 nsv545692 1 17228358 17331039 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710924 M 17421 0 1 "" nsv511680 1 17240078 17242586 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626318 M 1 0 1 "" 1 esv1009642 1 17241453 17241740 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3578196 M 3 0 1 "" HuRef esv1398963 1 17241502 17241790 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4132855 M 2 0 1 "" HuRef nsv508958 1 17244847 17296637 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623775,nssv621083,nssv619777 M 4 3 0 "" NA10860,NA15510,NA18994 nsv481528 1 17250759 17250759 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013550 M 9 0 0 "" nsv521814 1 17260158 17265829 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694586 M 2026 0 1 "" nsv516116 1 17265829 17287314 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv668375,nssv666311,nssv654821,nssv691565,nssv669330 M 2026 5 0 "" esv2762268 1 17268401 17290614 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7007855 M 1109 1 0 "" SW_1213 nsv545693 1 17269316 17287314 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710925 M 17421 1 0 "" nsv4076 1 17283238 17294917 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv955 M 9 1 0 "" NA19240 esv1667289 1 17289301 17289301 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3808815 M 2 1 0 "" HuRef esv997286 1 17289307 17292933 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565762 M 3 1 0 "" HuRef esv2674909 1 17315532 17316425 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6207285,essv6543344,essv5677106,essv5982492,essv6453312,essv5539586,essv6425476 M 1151 0 7 "" NA18486,NA18867,NA19130,NA19443,NA19469,NA19470,NA19713 nsv481233 1 17326189 17326189 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019868 M 9 0 0 "" nsv545694 1 17348326 17350348 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710926 M 17421 0 1 "" nsv511142 1 17348326 17354782 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625376 M 1 0 1 "" 1 esv33950 1 17349020 17350619 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv101586,essv92812,essv95937,essv101249,essv95433,essv96455,essv100231,essv96134,essv96384,essv95861,essv93123,essv94943,essv95154,essv96650,essv100601 M 51 12 3 "" 21603,21618,21721,21847,21863,21911,21944,22007,22011,22127,22231,22261,22286,22298,22371 esv21592 1 17349391 17352435 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16374,esv15492,esv15841 M 40 0 14 "" NA06985,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12489,NA12749,NA12828,NA15510 esv4441 1 17349398 17351267 CNV loss Wang_et_al_2008 18987735 Sequencing essv26882 M 1 0 1 "" YH nsv511681 1 17349505 17351203 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626319 M 1 0 1 "" 1 esv2853236 1 17349672 17351165 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7122803 M 1 0 1 "" HuRef dgv23e199 1 17349677 17351170 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2662192,esv2673709 M 1151 0 450 "" HG00096,HG00098,HG00100,HG00106,HG00108,HG00111,HG00114,HG00118,HG00122,HG00123,HG00124,HG00125,HG00126,HG00136,HG00137,HG00138,HG00139,HG00143,HG00144,HG00145,HG00149,HG00150,HG00151,HG00154,HG00155,HG00158,HG00159,HG00160,HG00171,HG00173,HG00176,HG00177,HG00178,HG00181,HG00182,HG00183,HG00185,HG00186,HG00187,HG00188,HG00190,HG00236,HG00237,HG00239,HG00245,HG00246,HG00251,HG00253,HG00254,HG00256,HG00257,HG00258,HG00259,HG00262,HG00263,HG00266,HG00268,HG00270,HG00271,HG00272,HG00273,HG00274,HG00275,HG00276,HG00277,HG00278,HG00280,HG00285,HG00306,HG00309,HG00315,HG00318,HG00319,HG00321,HG00323,HG00324,HG00326,HG00329,HG00334,HG00335,HG00336,HG00337,HG00339,HG00342,HG00344,HG00345,HG00353,HG00357,HG00366,HG00369,HG00372,HG00375,HG00377,HG00380,HG00403,HG00404,HG00418,HG00421,HG00422,HG00427,HG00428,HG00436,HG00442,HG00448,HG00449,HG00464,HG00475,HG00478,HG00479,HG00500,HG00501,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00543,HG00551,HG00553,HG00554,HG00556,HG00557,HG00559,HG00565,HG00566,HG00577,HG00578,HG00580,HG00581,HG00589,HG00590,HG00592,HG00595,HG00596,HG00607,HG00608,HG00610,HG00611,HG00614,HG00619,HG00620,HG00626,HG00628,HG00629,HG00634,HG00635,HG00637,HG00638,HG00641,HG00650,HG00653,HG00654,HG00657,HG00663,HG00671,HG00672,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708,HG00731,HG00732,HG00734,HG00737,HG01048,HG01052,HG01055,HG01060,HG01061,HG01066,HG01069,HG01070,HG01072,HG01075,HG01080,HG01082,HG01083,HG01095,HG01097,HG01101,HG01107,HG01112,HG01133,HG01134,HG01136,HG01137,HG01140,HG01148,HG01149,HG01168,HG01170,HG01173,HG01174,HG01182,HG01188,HG01190,HG01191,HG01198,HG01204,HG01250,HG01251,HG01350,HG01351,HG01354,HG01356,HG01357,HG01359,HG01360,HG01365,HG01374,HG01375,HG01378,HG01384,HG01437,HG01440,HG01441,HG01456,HG01462,HG01488,HG01489,HG01491,HG01494,HG01497,HG01498,HG01515,HG01518,HG01519,HG01521,HG01522,HG01550,NA07000,NA07048,NA07051,NA07056,NA07347,NA10847,NA11843,NA11918,NA11920,NA11931,NA11992,NA11993,NA12003,NA12004,NA12006,NA12155,NA12156,NA12275,NA12283,NA12287,NA12341,NA12347,NA12348,NA12489,NA12717,NA12748,NA12749,NA12750,NA12751,NA12761,NA12763,NA12828,NA18526,NA18532,NA18533,NA18534,NA18535,NA18537,NA18538,NA18539,NA18541,NA18542,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18553,NA18557,NA18559,NA18560,NA18561,NA18562,NA18565,NA18566,NA18567,NA18570,NA18571,NA18572,NA18573,NA18574,NA18576,NA18577,NA18579,NA18582,NA18592,NA18595,NA18597,NA18599,NA18602,NA18603,NA18605,NA18609,NA18610,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18618,NA18619,NA18621,NA18622,NA18623,NA18627,NA18630,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18940,NA18941,NA18943,NA18944,NA18945,NA18947,NA18949,NA18950,NA18951,NA18952,NA18956,NA18959,NA18961,NA18963,NA18964,NA18965,NA18967,NA18971,NA18972,NA18973,NA18974,NA18976,NA18977,NA18980,NA18981,NA18982,NA18985,NA18986,NA18987,NA18988,NA18989,NA18990,NA18999,NA19000,NA19002,NA19003,NA19004,NA19005,NA19009,NA19010,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19059,NA19060,NA19062,NA19063,NA19064,NA19066,NA19067,NA19068,NA19070,NA19074,NA19075,NA19076,NA19077,NA19081,NA19082,NA19083,NA19084,NA19085,NA19087,NA19360,NA19436,NA19466,NA19652,NA19654,NA19660,NA19663,NA19682,NA19685,NA19712,NA19717,NA19719,NA19722,NA19725,NA19726,NA19728,NA19729,NA19731,NA19750,NA19755,NA19759,NA19770,NA19774,NA19776,NA19777,NA19782,NA19788,NA19982,NA20299,NA20314,NA20344,NA20505,NA20510,NA20516,NA20525,NA20533,NA20540,NA20581,NA20586,NA20761,NA20768,NA20783,NA20798,NA20801,NA20809,NA20816 nsv545696 1 17349796 17350399 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv710928 M 17421 1 0 "" dgv172n54 1 17349796 17350474 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545695,nsv545702 M 17421 0 2 "" nsv545697 1 17349796 17350701 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711025,nssv711088,nssv711216,nssv711087,nssv711009,nssv711151,nssv711054,nssv711217,nssv711152,nssv711059,nssv711014,nssv711121,nssv711055,nssv711079,nssv710946,nssv710976,nssv711103,nssv711064,nssv711224,nssv711198,nssv710949,nssv711197,nssv711104,nssv711067,nssv711030,nssv711137,nssv711001,nssv711073,nssv711146,nssv711180,nssv710989,nssv711173,nssv711212,nssv711072,nssv710945,nssv711136,nssv711037,nssv710940,nssv711071,nssv711068,nssv710967,nssv711070,nssv711080,nssv710995,nssv710998,nssv710957,nssv711147,nssv711179,nssv710932,nssv711069,nssv711172,nssv711138,nssv711211,nssv710939,nssv711134,nssv711191,nssv711133,nssv711122,nssv711139,nssv711170,nssv711195,nssv710991,nssv711077,nssv711031,nssv710948,nssv710960,nssv711205,nssv711193,nssv711192,nssv711144,nssv710992,nssv710962,nssv711171,nssv710931,nssv711016,nssv711140,nssv710965,nssv711019,nssv710971,nssv710938,nssv711120,nssv710958,nssv710970,nssv710986,nssv711043,nssv710980,nssv711004,nssv710930,nssv710936,nssv710934,nssv711078,nssv711111,nssv711038,nssv710935,nssv710975,nssv710944,nssv711075,nssv711032,nssv710966,nssv711194,nssv710954,nssv711020,nssv711196,nssv710941,nssv710984,nssv711141,nssv711058,nssv710983,nssv711169,nssv711142,nssv711076,nssv711145,nssv711074,nssv711143,nssv711132,nssv710973,nssv710968,nssv711013,nssv711053,nssv711005,nssv711085,nssv711101,nssv711066,nssv711200,nssv711086,nssv711150,nssv711008,nssv711149,nssv711177,nssv711218,nssv711041,nssv711126,nssv711123,nssv711204,nssv711174,nssv711210,nssv711220,nssv710943,nssv711178,nssv711199,nssv711024,nssv710974,nssv711081,nssv711221,nssv711065,nssv711084,nssv711042,nssv710950,nssv710981,nssv711125,nssv711083,nssv711202,nssv711044,nssv711201,nssv711175,nssv710951,nssv711011,nssv711102,nssv711124,nssv711082,nssv710978,nssv711057,nssv711219,nssv711203,nssv710955,nssv711040,nssv711039,nssv710937,nssv711176,nssv711148,nssv710996,nssv710942,nssv710990,nssv711155,nssv711118,nssv711052,nssv711036,nssv711003,nssv710953,nssv711035,nssv711051,nssv711168,nssv711154,nssv710999,nssv711206,nssv711207,nssv711089,nssv710997,nssv711010,nssv711215,nssv711023,nssv711223,nssv711119,nssv711062,nssv711017,nssv710933,nssv711167,nssv711189,nssv711153,nssv711028,nssv710979,nssv711190,nssv711090,nssv711026,nssv711209,nssv711007,nssv711063,nssv711214,nssv711012,nssv710982,nssv711188,nssv711131,nssv710956,nssv711187,nssv711130,nssv711109,nssv711135,nssv711181,nssv711000,nssv711002,nssv710994,nssv711029,nssv711163,nssv711117,nssv710929,nssv711208,nssv711022,nssv711185,nssv711129,nssv711021,nssv711156,nssv711127,nssv710959,nssv711045,nssv711049,nssv711034,nssv711097,nssv710993,nssv711099,nssv710964,nssv711094,nssv711018,nssv710972,nssv711093,nssv711161,nssv711162,nssv711116,nssv711164,nssv711015,nssv711033,nssv710961,nssv711165,nssv711060,nssv711166,nssv711159,nssv711091,nssv711061,nssv710947,nssv710952,nssv711186,nssv711160,nssv711092,nssv711128,nssv711056,nssv711047,nssv711157,nssv711114,nssv711183,nssv711006,nssv711098,nssv710969,nssv711107,nssv711100,nssv711095,nssv711213,nssv711096,nssv711027,nssv711048,nssv710977,nssv711050,nssv711108,nssv711106,nssv710985,nssv711046,nssv711113,nssv711158,nssv710987,nssv711105,nssv711110,nssv711222,nssv710963,nssv711182,nssv710988,nssv711184,nssv711115,nssv711112 M 17421 0 296 "" dgv173n54 1 17349796 17356546 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545698,nsv545709 M 17421 0 2 "" dgv26n67 1 17349843 17350821 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv821909,nsv821921 M 31 0 10 "" AK10,AK18,AK2,AK6,NA18542,NA18547,NA18582,NA18592,NA18947,NA18951 dgv174n54 1 17349848 17350245 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545700,nsv545699,nsv545701 M 17421 0 4 "" dgv175n54 1 17350002 17350701 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545703,nsv545707,nsv545705,nsv545708 M 17421 0 7 "" dgv176n54 1 17350053 17350413 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545704,nsv545706 M 17421 0 2 "" esv2668971 1 17350260 17350574 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6575921,essv6425808,essv6589280,essv6004197,essv6589300,essv6487892,essv6590465,essv6140222,essv6572379,essv5845825,essv6588122,essv6513989,essv6585760,essv6356460,essv6586594,essv6300106,essv6590097,essv6398321,essv6587187,essv6128643,essv6597952,essv5828470,essv6597277,essv5923942,essv6588631,essv5435295,essv6575089,essv6534643,essv6522335,essv6197835,essv5812284,essv6472143,essv5814373,essv6064294,essv5857059,essv6270143,essv6384800,essv6471205,essv6316978,essv6251135,essv5962340,essv6187276,essv5439049,essv5674886,essv6098388,essv5540901,essv6539623,essv5742452,essv6319276,essv6015793,essv6515691,essv5887555,essv6547338,essv5714458,essv5775939,essv6433099,essv6286529,essv5831445,essv5475768,essv6226561,essv6427606,essv6190829,essv5410540,essv6237499,essv5812294,essv5875969,essv6464188,essv6277119,essv6145776,essv5767166,essv6305136,essv5531444,essv5751151,essv5702649,essv5901643,essv5498619,essv5786235,essv6310102,essv5794613,essv5722530,essv6040056,essv5822873,essv5971604,essv5864069,essv6357121,essv5681424,essv5696056,essv6119904,essv5830435,essv6558653,essv5491752,essv6408671,essv5777780,essv5898309,essv6555283,essv5764097,essv5597745,essv5856732,essv6070585,essv5583507,essv6297150,essv5779531,essv5965198,essv5741565,essv6061371,essv6533626,essv5768547,essv5587996,essv5679247,essv6387344,essv6360051,essv5676839,essv5822169,essv5857990,essv5740463,essv5400073,essv5795834,essv5768122,essv6098759,essv5976725,essv5733371,essv5723557,essv5778292,essv5471589,essv6493193,essv5549925,essv5531181,essv5986567,essv5566238,essv5986487,essv5779786,essv5815767,essv6260198,essv5474895,essv5755151,essv6343914,essv5417702,essv6105306,essv6137625,essv6223320,essv5735345,essv5843002,essv5951857,essv5793252,essv6069195,essv6175182,essv5959470,essv5686163,essv6056488,essv6480386,essv6523718,essv6496576,essv6018406,essv5702184,essv6011037,essv5774886,essv6492474,essv6491259,essv6341164,essv5734333,essv5818707,essv5733481,essv5954070,essv5766854,essv5875559,essv6561308,essv6317627,essv6010376,essv6227314,essv5895482,essv5831260,essv6300425,essv5941194,essv5949065,essv5718995,essv6234866,essv5784815,essv6258852,essv5987121,essv6546367,essv5683107,essv5519646,essv5726246,essv6292522,essv5492311,essv5730184,essv6216645,essv5772833,essv6201923,essv5818897,essv5410022,essv5753334,essv5922881,essv6242374,essv6327079,essv6013299,essv5480144,essv6351315,essv5804145,essv5583939,essv6462139,essv6438202,essv5560410,essv6175745,essv6527716,essv5552801,essv6177847,essv5561030,essv5710981,essv5641197,essv6421021,essv5719114,essv5470739,essv6571109,essv6571261,essv5687710,essv5441885,essv6213717,essv5544073,essv6496822,essv5660678,essv5899059,essv6255643,essv6074323,essv5468017,essv6014089,essv5918057,essv5885339,essv6278968,essv6122547,essv5400684,essv5619631,essv5449688,essv6082005,essv5563867,essv6399931,essv5656233,essv6408020,essv6042755,essv6056704,essv6327150,essv6346338,essv5927619,essv5516699,essv6325385,essv6093232,essv5560098,essv6148287,essv6251620,essv5492221,essv5974211,essv6103997,essv6296419,essv5575282,essv5903813,essv6504909,essv5876283,essv6289019,essv6258346,essv6071733,essv5449744,essv5606128,essv5497775,essv5429822,essv6394777,essv6214056,essv5563834,essv5617166,essv5398889,essv5955781,essv5452465,essv5899590,essv5978190,essv6435876,essv6231082,essv6265345,essv5529919,essv5536627,essv5508508,essv5596741,essv6133159,essv5542932,essv6480169,essv6041256,essv6348112,essv6489407,essv6064754,essv5640005,essv6014847,essv5923598,essv5551588,essv6128373,essv5404742,essv6463884,essv6520803,essv5430739,essv5910133,essv5843177,essv6076498,essv5995070,essv6392383,essv6175869,essv5854481,essv6001907,essv6488141,essv6331793,essv5611827,essv5671134,essv6040606,essv5599537,essv6515487,essv5544420,essv5425144,essv6560547,essv6279898,essv5936368,essv5843222,essv5998513,essv5666573,essv5651486,essv5495607,essv5902777,essv6048539,essv5738058,essv5638674,essv6145187,essv5464976,essv6218809,essv5546062,essv6125174,essv6348860,essv5906449,essv6116779,essv5606083,essv6433703,essv5427241,essv5899634,essv6057137,essv5560453,essv6533902,essv6088105,essv6442272,essv6219080,essv5655354,essv6053280,essv5415703,essv6416652,essv6370417,essv6052942,essv6300217,essv5959490,essv5501866,essv5497868,essv6036491,essv5457544,essv5426085,essv6112655,essv5599410,essv6519515,essv6178410,essv5916234,essv6400822,essv5667214,essv5971462,essv5799035,essv6366763,essv6533013,essv6159488,essv6300072,essv5555098,essv6022790,essv6544427,essv5959232,essv5442980,essv5532376,essv6206837,essv6495602,essv6286474,essv6440779,essv5947019,essv6458746,essv5565877,essv5967997,essv5932264,essv6251103,essv5486810,essv6041410,essv6157323,essv6311775,essv6263499,essv6075844,essv6100570,essv5661630,essv5627585,essv5509800,essv6353024,essv6211335,essv5661464,essv5552738,essv5529660,essv6493590,essv5915181,essv5634001,essv6110716,essv5523310,essv5957974,essv6363525,essv6372651,essv5925907,essv6323098,essv5933017,essv5407721,essv5993700,essv5620368,essv6211209,essv6390354,essv5898856,essv6077438,essv6566493,essv5442434,essv5618962,essv6303493,essv5922997,essv6354056,essv6147737,essv6295491,essv5666187,essv5558164,essv6020303,essv5852424,essv6555680,essv5456391,essv5993410,essv5613767,essv6325377,essv6504587,essv5560591,essv6162807,essv6318124,essv6184342,essv6117783,essv5556408,essv5451549 M 1151 0 443 "" HG00100,HG00106,HG00108,HG00111,HG00114,HG00118,HG00122,HG00123,HG00124,HG00125,HG00126,HG00136,HG00137,HG00138,HG00139,HG00142,HG00143,HG00149,HG00150,HG00151,HG00154,HG00155,HG00158,HG00159,HG00160,HG00171,HG00173,HG00176,HG00177,HG00178,HG00182,HG00183,HG00185,HG00186,HG00187,HG00188,HG00190,HG00236,HG00237,HG00239,HG00245,HG00251,HG00253,HG00254,HG00256,HG00257,HG00258,HG00259,HG00261,HG00262,HG00263,HG00268,HG00270,HG00271,HG00272,HG00273,HG00274,HG00276,HG00277,HG00278,HG00280,HG00285,HG00306,HG00309,HG00315,HG00318,HG00319,HG00323,HG00324,HG00326,HG00329,HG00334,HG00335,HG00336,HG00337,HG00339,HG00344,HG00345,HG00353,HG00357,HG00366,HG00369,HG00372,HG00375,HG00377,HG00403,HG00404,HG00418,HG00421,HG00422,HG00427,HG00428,HG00436,HG00442,HG00448,HG00449,HG00464,HG00475,HG00478,HG00479,HG00500,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00543,HG00553,HG00554,HG00556,HG00557,HG00559,HG00565,HG00566,HG00577,HG00578,HG00580,HG00581,HG00584,HG00589,HG00590,HG00592,HG00595,HG00596,HG00607,HG00608,HG00611,HG00620,HG00628,HG00629,HG00634,HG00635,HG00637,HG00638,HG00641,HG00650,HG00653,HG00654,HG00657,HG00663,HG00671,HG00672,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708,HG00731,HG00732,HG00734,HG00737,HG01048,HG01052,HG01055,HG01060,HG01061,HG01066,HG01067,HG01069,HG01070,HG01072,HG01075,HG01080,HG01082,HG01083,HG01095,HG01101,HG01107,HG01133,HG01134,HG01136,HG01137,HG01140,HG01148,HG01149,HG01170,HG01174,HG01190,HG01191,HG01198,HG01204,HG01250,HG01350,HG01351,HG01354,HG01356,HG01357,HG01359,HG01365,HG01374,HG01375,HG01378,HG01384,HG01437,HG01440,HG01441,HG01462,HG01488,HG01489,HG01491,HG01492,HG01494,HG01497,HG01515,HG01518,HG01519,HG01521,HG01522,NA07000,NA07048,NA07051,NA07056,NA07347,NA11918,NA11920,NA11931,NA11933,NA12003,NA12155,NA12275,NA12283,NA12286,NA12341,NA12347,NA12348,NA12383,NA12718,NA12748,NA12749,NA12751,NA12763,NA12777,NA12827,NA12889,NA18534,NA18535,NA18536,NA18538,NA18541,NA18542,NA18543,NA18544,NA18545,NA18546,NA18547,NA18548,NA18549,NA18550,NA18552,NA18553,NA18557,NA18559,NA18560,NA18561,NA18562,NA18564,NA18565,NA18566,NA18567,NA18570,NA18571,NA18572,NA18573,NA18574,NA18576,NA18577,NA18579,NA18582,NA18592,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18605,NA18609,NA18610,NA18612,NA18613,NA18614,NA18615,NA18616,NA18617,NA18619,NA18621,NA18622,NA18623,NA18627,NA18630,NA18631,NA18632,NA18633,NA18634,NA18635,NA18636,NA18637,NA18638,NA18940,NA18941,NA18944,NA18945,NA18949,NA18950,NA18951,NA18952,NA18956,NA18959,NA18961,NA18963,NA18964,NA18965,NA18977,NA18980,NA18982,NA18985,NA18986,NA18987,NA18988,NA18989,NA18990,NA18999,NA19000,NA19002,NA19003,NA19004,NA19009,NA19010,NA19012,NA19054,NA19055,NA19056,NA19057,NA19058,NA19059,NA19060,NA19062,NA19063,NA19064,NA19066,NA19067,NA19068,NA19070,NA19074,NA19075,NA19076,NA19077,NA19081,NA19082,NA19083,NA19084,NA19085,NA19087,NA19360,NA19436,NA19466,NA19467,NA19474,NA19652,NA19654,NA19657,NA19660,NA19663,NA19682,NA19685,NA19712,NA19717,NA19719,NA19720,NA19722,NA19725,NA19726,NA19731,NA19747,NA19755,NA19756,NA19770,NA19771,NA19776,NA19777,NA19782,NA19788,NA19982,NA20314,NA20342,NA20505,NA20506,NA20509,NA20510,NA20512,NA20520,NA20521,NA20524,NA20527,NA20528,NA20529,NA20533,NA20535,NA20537,NA20540,NA20581,NA20582,NA20585,NA20586,NA20588,NA20753,NA20754,NA20755,NA20759,NA20761,NA20765,NA20768,NA20770,NA20773,NA20774,NA20775,NA20778,NA20783,NA20785,NA20798,NA20799,NA20800,NA20801,NA20804,NA20806,NA20809,NA20811,NA20812,NA20813,NA20814,NA20816,NA20819,NA20828 nsv958215 1 17358232 17358575 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3005200 M 1 0 1 "" BILGI_BIOE nsv473158 1 17374426 17374426 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016455 M 9 1 0 "" NA19129 esv2590404 1 17378277 17379705 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5203286 M 1 0 1 "" NA18507 esv2214804 1 17378927 17379574 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4985556 M 1 0 1 "" NA18507 esv2626551 1 17379112 17379423 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5305827 M 1 0 1 "" NA18507 nsv478562 1 17396289 17396289 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011985 M 9 1 0 "" NA18507 nsv945802 1 17406691 17408548 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755967,nssv1755923,nssv1755961,nssv1755917,nssv1755879,nssv1755952,nssv1755877,nssv1755930,nssv1755892,nssv1755922,nssv1755883,nssv1754313,nssv1755884,nssv1755936,nssv1755897,nssv1755904,nssv1755966,nssv1755926,nssv1755894,nssv1755876,nssv1755971,nssv1755927,nssv1755893,nssv1755950,nssv1755886,nssv1755953,nssv1755889,nssv1755943,nssv1755882,nssv1755972,nssv1755970,nssv1755938,nssv1755881,nssv1755912,nssv1755890,nssv1755937,nssv1755965,nssv1755919,nssv1755963,nssv1755910,nssv1755895,nssv1755949,nssv1755896,nssv1754311,nssv1755962,nssv1754312,nssv1755878,nssv1755945,nssv1755888,nssv1755955,nssv1755885,nssv1755939,nssv1755887,nssv1755951,nssv1755964,nssv1755934,nssv1754317,nssv1755901,nssv1755942,nssv1755973,nssv1755900,nssv1755954,nssv1754316,nssv1755947,nssv1755948,nssv1755906,nssv1755958,nssv1755960,nssv1755940,nssv1755914,nssv1755928,nssv1755911,nssv1755944,nssv1754318,nssv1755909,nssv1755916,nssv1755899,nssv1755969,nssv1755918,nssv1755932,nssv1754315,nssv1755905,nssv1755959,nssv1755915,nssv1755920,nssv1755898,nssv1755903,nssv1755925,nssv1755941,nssv1755929,nssv1755956,nssv1755907,nssv1755931,nssv1754314,nssv1755921,nssv1755933,nssv1755908 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv821932 1 17438003 17440423 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426379 M 31 1 0 "" AK6 nsv475340 1 17443302 17443302 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019257 M 9 1 0 "" NA19240 esv2658880 1 17489120 17493370 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5837730 M 1151 0 1 "" NA19078 nsv945804 1 17489199 17502623 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1754380,nssv1754405,nssv1754388,nssv1754327,nssv1754408,nssv1754325,nssv1754339,nssv1754406,nssv1754395,nssv1754328,nssv1754372,nssv1754332,nssv1754370,nssv1754326,nssv1754374,nssv1754320,nssv1754352,nssv1754337,nssv1754404,nssv1754401,nssv1754360,nssv1754333,nssv1754363,nssv1754335,nssv1754377,nssv1754336,nssv1754350,nssv1754400,nssv1754355,nssv1754324,nssv1754384,nssv1754331,nssv1754375,nssv1754397,nssv1754371,nssv1754398,nssv1754365,nssv1754323,nssv1754362,nssv1754403,nssv1754369,nssv1754321,nssv1754344,nssv1754330,nssv1754385,nssv1754338,nssv1754357,nssv1754329,nssv1754366,nssv1754399,nssv1754392,nssv1754322,nssv1754413,nssv1754334,nssv1754415,nssv1754402,nssv1754373,nssv1754407,nssv1754354,nssv1754351,nssv1754390,nssv1754319,nssv1754359,nssv1754340,nssv1754382,nssv1754383,nssv1754396,nssv1754393,nssv1754410,nssv1754358,nssv1755032,nssv1754356,nssv1754361,nssv1754348,nssv1754378,nssv1754347,nssv1754353,nssv1754389,nssv1754412,nssv1754364,nssv1754343,nssv1754414,nssv1754381,nssv1754342,nssv1754387,nssv1754391,nssv1754409,nssv1754379,nssv1754345,nssv1754349,nssv1754386,nssv1754367,nssv1754346,nssv1754368,nssv1754394,nssv1754341,nssv1754411 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv4187 1 17503448 17537498 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2861 M 9 1 0 "" NA18555 esv2676950 1 17513894 17517730 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5798081 M 1151 0 1 "" NA18637 nsv834302 1 17531435 17713452 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443785,nssv1443796 M 95 0 2 "" esv997027 1 17535283 17550583 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564910 M 3 0 0 "" HuRef nsv818089 1 17561468 17576803 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417309 M 112 0 1 "" NA18608 nsv470701 1 17561468 17592105 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547714 M 443 0 1 "" HGDP00825 esv988531 1 17562916 17573454 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563476 M 3 0 1 "" HuRef nsv460673 1 17566321 17592105 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537212 M 1557 0 1 "" HGDP00553 nsv545710 1 17566321 17592105 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173788 M 17421 0 1 "" HGDP00553 nsv954872 1 17585706 17709805 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003144 M 1 0 1 "" BILGI_BIOE nsv4298 1 17615171 17636174 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8255 M 9 0 1 "" NA12156 esv2659798 1 17671228 17677360 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6231586,essv6083805,essv6019654 M 1151 0 3 "" HG01055,NA19359,NA20322 esv2764267 1 17671986 17677451 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005181,essv7005182 M 1109 0 2 "" RW_0079,RW_0090 nsv518693 1 17672282 17674132 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696144 M 2026 0 1 "" esv2661094 1 17683112 17683369 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6464162,essv5849927,essv6529968,essv5942546,essv6431843,essv6041365,essv6422733,essv5495308,essv6444158,essv5834010,essv6336514,essv5719322,essv6341178,essv6054663,essv6421116,essv5693568,essv6283282,essv5922399,essv6402872,essv5885133,essv6560865,essv6146675,essv6494099,essv5400854,essv6504484,essv5897210,essv6531610,essv5818974,essv6426380,essv5656296,essv6318610,essv5494918,essv6259537,essv5878829,essv6459527,essv6078925,essv6487250,essv5471448,essv6233303,essv5654483,essv6279593,essv5742045,essv6285990,essv5408908,essv5959897,essv6161024,essv5867182,essv6144540,essv6127850,essv5491675 M 1151 0 50 "" HG00108,HG00111,HG00124,HG00127,HG00237,HG00250,HG00251,HG00275,HG00280,HG00284,HG00285,HG00313,HG00331,HG00334,HG00342,HG00343,HG00344,HG00418,HG00443,HG00479,HG00531,HG00580,HG00656,HG00693,HG00698,HG00699,HG00702,HG00707,HG00708,HG01061,HG01067,HG01073,HG01250,HG01351,HG01365,HG01437,HG01440,HG01441,NA18486,NA18544,NA18548,NA18596,NA18612,NA18633,NA19360,NA19374,NA19398,NA19403,NA19762,NA20291 nsv512721 1 17688805 17689490 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625346 M 1 1 0 "" 1 esv3351922 1 17689444 17689639 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652056 M 185 1 0 "" NA19240 esv2668483 1 17735188 17736589 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6007743,essv6230113 M 1151 0 2 "" NA18544,NA18619 nsv508248 1 17737910 17813810 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622757 M 4 0 1 "" NA18994 nsv518590 1 17747010 17748207 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv696036 M 2026 0 1 "" esv2669735 1 17782007 17783256 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5631732,essv6161052 M 1151 0 2 "" NA19434,NA19438 nsv161140 1 17897637 17897637 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179718 M 24 "" esv275339 1 17904041 17910125 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585726 M 1250 0 1 "" esv3343287 1 17944601 17944612 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898726,essv8898720,essv8898718,essv8898716,essv8898723,essv8898724,essv8898722,essv8898717,essv8898719,essv8898721,essv8898715,essv8898713 M 185 12 0 "" NA18499,NA18504,NA18508,NA18510,NA18517,NA18870,NA18871,NA18909,NA19093,NA19099,NA19116,NA19129 esv3305133 1 17944602 17944603 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7760422,essv7744162,essv7749767,essv7758530,essv7753431,essv7756261,essv7758822,essv7741380,essv7759049,essv7740581,essv7740953,essv7761490 M 185 12 0 "" NA18499,NA18504,NA18508,NA18510,NA18517,NA18870,NA18871,NA18909,NA19093,NA19099,NA19116,NA19129 nsv834313 1 17955421 18162607 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443807,nssv1443818,nssv1443829 M 95 0 3 "" nsv508969 1 17986173 18052137 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619778,nssv623776 M 4 2 0 "" NA10860,NA18994 esv3305695 1 18004952 18004953 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7744658,essv7741374 M 185 2 0 "" NA18871,NA19190 esv3431824 1 18004973 18005033 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898728,essv8898727 M 185 2 0 "" NA18871,NA19190 nsv478978 1 18013980 18013980 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012826 M 9 0 0 "" nsv521926 1 18022290 18085887 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694696 M 2026 0 1 "" nsv526833 1 18048446 18051296 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703190 M 2026 0 1 "" nsv954883 1 18077507 18081506 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003145 M 1 0 1 "" BILGI_BIOE nsv475223 1 18088934 18088934 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015205 M 9 1 0 "" NA19240 dgv177n54 1 18093650 18117498 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545712,nsv545711 M 17421 0 2 "" nsv954894 1 18107507 18111006 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003146 M 1 0 1 "" BILGI_BIOE nsv834324 1 18174413 18354840 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443840 M 95 1 0 "" nsv4409 1 18180503 18213872 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8323 M 9 1 0 "" NA12156 nsv460684 1 18217290 18231251 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537223 M 1557 0 1 "" HGDP00554 nsv545713 1 18217290 18231251 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173789 M 17421 0 1 "" HGDP00554 nsv4520 1 18235425 18270583 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3912 M 9 1 0 "" NA12878 nsv478816 1 18241743 18241743 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012525 M 9 1 0 "" NA18507 nsv545714 1 18250219 18305874 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711243 M 17421 0 1 "" nsv528445 1 18252544 18274330 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705040 M 2026 0 1 "" nsv834336 1 18300359 18486706 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443852 M 95 0 1 "" nsv4631 1 18303007 18335766 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6396 M 9 1 0 "" NA12156 esv994039 1 18330588 18330683 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3570521 M 3 0 1 "" HuRef nsv545715 1 18346280 18403811 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711244 M 17421 0 1 "" nsv475630 1 18370595 18370595 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016293 M 9 1 0 "" NA12878 nsv4743 1 18376101 18421316 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8453 M 9 0 1 "" NA12156 esv2660755 1 18395902 18396235 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6325343 M 1151 0 1 "" NA19625 nsv545716 1 18432883 18448289 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711245 M 17421 0 1 "" esv3302487 1 18466039 18466117 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7731444,essv7731195 M 185 0 0 "" NA12878,NA12891 esv995072 1 18466044 18466044 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3567950 M 3 1 0 "" HuRef nsv160887 1 18466046 18466046 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv179465 M 24 "" esv3345928 1 18466053 18466129 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670855,essv8670854 M 185 2 0 "" NA12878,NA12891 esv1135568 1 18466107 18466107 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4108538 M 2 1 0 "" HuRef nsv159998 1 18466115 18466115 CNV insertion Mills_et_al_2006 16902084 Sequencing nssv178576 M 24 "" nsv545717 1 18472791 18492207 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711246 M 17421 0 1 "" esv275146 1 18473753 18480623 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585623 M 1250 0 1 "" nsv518311 1 18486532 18486951 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695742 M 2026 0 1 "" nsv4854 1 18546437 18592087 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6404 M 9 0 1 "" NA12156 nsv460706 1 18567098 18582371 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537241 M 1557 0 1 "" HGDP01278 nsv545718 1 18567098 18582371 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173790 M 17421 0 1 "" HGDP01278 esv1600907 1 18598140 18598210 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4315808 M 2 0 1 "" HuRef nsv4965 1 18605318 18638892 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5358 M 9 1 0 "" NA19129 esv3417922 1 18653189 18653197 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863678 M 185 1 0 "" NA12005 nsv5076 1 18659108 18703780 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8574 M 9 0 1 "" NA12156 nsv506920 1 18668984 18674984 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619225 M 4 0 0 "" NA10860 esv2599950 1 18725995 18726146 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5276923 M 1 0 1 "" NA18507 esv1070523 1 18744470 18744470 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4207695 M 2 1 0 "" HuRef nsv5187 1 18755584 18800490 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8645 M 9 0 1 "" NA12156 nsv475087 1 18774217 18774217 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015109 M 9 1 0 "" NA18956 esv2589469 1 18824652 18826129 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5385528 M 1 0 1 "" NA18507 esv3876 1 18825257 18825911 CNV loss Wang_et_al_2008 18987735 Sequencing essv26317 M 1 0 1 "" YH dgv59e59 1 18857271 18858969 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3348156,esv3451670,esv3403682 M 185 3 0 "" NA19238,NA19239,NA19240 nsv472669 1 18868708 18868708 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012363 M 9 1 0 "" NA18555 nsv545719 1 18873686 18881699 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711247 M 17421 0 1 "" nsv479029 1 18897511 18897511 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011616 M 9 0 0 "" nsv834347 1 18916277 19142428 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443863 M 95 1 0 "" nsv512722 1 18925927 18926413 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625347 M 1 1 0 "" 1 esv26882 1 18999732 19001969 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16565 M 40 0 1 "" NA18858 esv21929 1 19029157 19033382 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv16928 M 40 0 1 "" NA19257 nsv954898 1 19029407 19078606 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003147 M 1 0 1 "" BILGI_BIOE nsv5298 1 19038881 19076114 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3923,nssv5363,nssv2867 M 9 3 0 "" NA12878,NA18555,NA19129 nsv508980 1 19042348 19097757 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621084 M 4 1 0 "" NA15510 dgv24e199 1 19043378 19046725 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2665756,esv2660808 M 1151 0 1 "" HG00418 esv2661924 1 19044871 19046891 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5419973 M 1151 0 1 "" HG00418 nsv545720 1 19049534 19060576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711248 M 17421 0 1 "" nsv545721 1 19056197 19060740 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711251,nssv711250,nssv711249 M 17421 1 2 "" nsv545722 1 19056197 19060848 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711252 M 17421 1 0 "" nsv545723 1 19056197 19068230 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711253 M 17421 1 0 "" nsv545724 1 19059864 19060740 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711258,nssv711260,nssv711255,nssv711261,nssv711257,nssv711254,nssv711259,nssv711256 M 17421 1 7 "" esv1963532 1 19059968 19060311 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4528609 M 1 0 1 "" NA18507 esv2661885 1 19060115 19060649 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6335539,essv5469295,essv5854987,essv6130313,essv5687689,essv5641231,essv5433943,essv5618206 M 1151 0 8 "" NA18489,NA18498,NA18548,NA18856,NA18933,NA18959,NA19663,NA19920 esv29322 1 19060168 19060878 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11291 M 40 0 2 "" NA12006,NA19225 nsv545725 1 19060197 19060792 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711264,nssv711262,nssv711268,nssv711266,nssv711263,nssv711267,nssv711265 M 17421 0 7 "" dgv178n54 1 19060197 19060848 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545726,nsv545728 M 17421 14 0 "" nsv545727 1 19060197 19066539 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711282 M 17421 0 1 "" nsv512723 1 19061305 19061423 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625348 M 1 1 0 "" 1 nsv477004 1 19143217 19143217 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015931 M 9 1 0 "" NA12878 nsv947415 1 19150679 19153385 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2761244 M 97 1 0 "" HGDP00665 nsv470702 1 19216437 19253475 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547715 M 443 1 0 "" HGDP01179 nsv471971 1 19223700 19223700 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018521 M 9 1 0 "" NA18555 nsv945806 1 19267253 19272269 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755057,nssv1755101,nssv1755125,nssv1755105,nssv1755043,nssv1755074,nssv1755052,nssv1755084,nssv1755048,nssv1755136,nssv1755129,nssv1755083,nssv1755122,nssv1755067,nssv1755055,nssv1755070,nssv1755050,nssv1755135,nssv1755049,nssv1755065,nssv1755058,nssv1755078,nssv1755059,nssv1755103,nssv1755046,nssv1755132,nssv1755124,nssv1755064,nssv1755128,nssv1755088,nssv1755051,nssv1755075,nssv1755047,nssv1755091,nssv1755056,nssv1755081,nssv1755054,nssv1755092,nssv1755121,nssv1755109,nssv1755123,nssv1755104,nssv1755060,nssv1755112,nssv1755044,nssv1755079,nssv1755053,nssv1755085,nssv1755126,nssv1755042,nssv1755120,nssv1755118,nssv1755045,nssv1755107,nssv1755061,nssv1755137,nssv1755099,nssv1755089,nssv1755116,nssv1755082,nssv1755076,nssv1755071,nssv1755133,nssv1755077,nssv1755110,nssv1755062,nssv1755069,nssv1755134,nssv1755080,nssv1755086,nssv1755130,nssv1755139,nssv1755108,nssv1755072,nssv1755094,nssv1755115,nssv1755068,nssv1755113,nssv1755119,nssv1755111,nssv1755066,nssv1755097,nssv1755073,nssv1755095,nssv1755102,nssv1755106,nssv1755063,nssv1755090,nssv1755138,nssv1755096,nssv1755100,nssv1755114,nssv1755127,nssv1755131,nssv1755098,nssv1755087,nssv1755117 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv25e199 1 19270091 19287665 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2659057,esv2663537 M 1151 0 23 "" HG00253,HG00320,HG00422,HG00543,HG00637,HG00693,HG01107,HG01441,NA10851,NA11930,NA18523,NA19072,NA19213,NA19235,NA19374,NA19445,NA19452,NA19461,NA19704,NA19755,NA19834,NA20340,NA20344 esv26443 1 19273138 19288033 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11560 M 40 0 2 "" NA18523,NA18858 nsv473677 1 19276525 19276525 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010781 M 9 1 0 "" NA19129 nsv472824 1 19281596 19281596 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019594 M 9 1 0 "" NA18555 nsv945807 1 19282774 19286791 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755220,nssv1755160,nssv1755158,nssv1755206,nssv1755141,nssv1755187,nssv1755226,nssv1755225,nssv1755223,nssv1755171,nssv1755146,nssv1755192,nssv1755150,nssv1755215,nssv1755153,nssv1755170,nssv1755218,nssv1755209,nssv1755147,nssv1755185,nssv1755155,nssv1755196,nssv1755156,nssv1755188,nssv1755224,nssv1755207,nssv1755157,nssv1755236,nssv1755222,nssv1755161,nssv1755144,nssv1755198,nssv1755148,nssv1755212,nssv1755149,nssv1755201,nssv1755145,nssv1755163,nssv1755152,nssv1755228,nssv1755154,nssv1755213,nssv1755219,nssv1755235,nssv1755221,nssv1755202,nssv1755159,nssv1755165,nssv1755142,nssv1755205,nssv1755151,nssv1755193,nssv1755143,nssv1755231,nssv1755227,nssv1755181,nssv1755230,nssv1755233,nssv1755195,nssv1755176,nssv1755182,nssv1755172,nssv1755173,nssv1755217,nssv1755177,nssv1755186,nssv1755232,nssv1755174,nssv1755175,nssv1755214,nssv1755180,nssv1755140,nssv1755190,nssv1755179,nssv1755210,nssv1755178,nssv1755183,nssv1755229,nssv1755189,nssv1755203,nssv1755199,nssv1755168,nssv1755237,nssv1755197,nssv1755211,nssv1755216,nssv1755191,nssv1755200,nssv1755164,nssv1755162,nssv1755166,nssv1755167,nssv1755204,nssv1755234,nssv1755184,nssv1755169,nssv1755208 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945808 1 19305989 19309381 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755239,nssv1755287,nssv1755326,nssv1755272,nssv1755317,nssv1755305,nssv1755323,nssv1755332,nssv1755244,nssv1755334,nssv1755251,nssv1755260,nssv1755322,nssv1755315,nssv1755245,nssv1755269,nssv1755241,nssv1755310,nssv1755254,nssv1755268,nssv1755248,nssv1755292,nssv1755255,nssv1755329,nssv1755321,nssv1755273,nssv1755325,nssv1755336,nssv1755247,nssv1755314,nssv1755249,nssv1755302,nssv1755243,nssv1755330,nssv1755250,nssv1755327,nssv1755319,nssv1755267,nssv1755252,nssv1755264,nssv1755242,nssv1755289,nssv1755318,nssv1755281,nssv1755240,nssv1755328,nssv1755320,nssv1755258,nssv1755257,nssv1755266,nssv1755256,nssv1755313,nssv1755253,nssv1755282,nssv1755246,nssv1755262,nssv1755307,nssv1755300,nssv1755286,nssv1755333,nssv1755283,nssv1755304,nssv1755265,nssv1755306,nssv1755277,nssv1755301,nssv1755316,nssv1755274,nssv1755270,nssv1755297,nssv1755259,nssv1755294,nssv1755263,nssv1755271,nssv1755293,nssv1755309,nssv1755291,nssv1755312,nssv1755261,nssv1755311,nssv1755290,nssv1755279,nssv1755284,nssv1755276,nssv1755298,nssv1755308,nssv1755299,nssv1755280,nssv1755303,nssv1755278,nssv1755331,nssv1755238,nssv1755324,nssv1755288,nssv1755275,nssv1755335,nssv1755285 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2547343 1 19320229 19322453 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5328741 M 1 0 1 "" NA18507 esv2660555 1 19320695 19321847 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6524171,essv5897392,essv6474845,essv5657035,essv6397280,essv6143651,essv6397292,essv5560725,essv6452882,essv5762404,essv6262062,essv6037947,essv6502609,essv6081891,essv6382508,essv6131776,essv6586113,essv6177338,essv6581219,essv5971308,essv6373180,essv5630160,essv6423245,essv5516489,essv6353463,essv5503826,essv6545446,essv5856439,essv5589110,essv5947311,essv5672962,essv6150029,essv6117639,essv6066976,essv5539812,essv5452959,essv5457820,essv5502447,essv5884607,essv5670067,essv5605436,essv6062088,essv5657975,essv5895796,essv5466640,essv6057476 M 1151 0 46 "" HG00640,HG01069,HG01174,HG01384,HG01462,NA18487,NA18489,NA18507,NA18510,NA18861,NA18867,NA18868,NA18871,NA18873,NA18874,NA18908,NA18912,NA18923,NA18924,NA18934,NA19108,NA19129,NA19171,NA19201,NA19225,NA19236,NA19238,NA19239,NA19240,NA19256,NA19257,NA19355,NA19371,NA19372,NA19373,NA19383,NA19435,NA19449,NA19457,NA19463,NA19467,NA19707,NA19713,NA19835,NA19908,NA20346 esv2674133 1 19330124 19334699 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5808480,essv6015034,essv6084393 M 1151 0 3 "" HG01359,HG01366,NA19758 nsv834358 1 19401371 19579533 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443874 M 95 0 1 "" nsv5409 1 19404804 19409380 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1934 M 9 1 0 "" NA18555 esv2398290 1 19434766 19435295 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4666927 M 1 0 1 "" NA18507 esv3747 1 19434866 19435170 CNV loss Wang_et_al_2008 18987735 Sequencing essv26188 M 1 0 1 "" YH esv6224 1 19434881 19435170 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28665 M 1 0 0 "" nsv471771 1 19434896 19435117 CNV loss Hinds_et_al_2006 16327809 Oligo aCGH,PCR nssv646052 M 95 "" dgv26e199 1 19434933 19435099 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2666198,esv2673483 M 1151 0 244 "" HG00108,HG00120,HG00125,HG00127,HG00140,HG00154,HG00174,HG00177,HG00180,HG00182,HG00183,HG00186,HG00187,HG00231,HG00232,HG00237,HG00242,HG00244,HG00246,HG00250,HG00251,HG00252,HG00254,HG00257,HG00259,HG00260,HG00266,HG00268,HG00273,HG00274,HG00275,HG00276,HG00278,HG00280,HG00282,HG00285,HG00309,HG00313,HG00319,HG00323,HG00324,HG00326,HG00328,HG00330,HG00334,HG00336,HG00337,HG00338,HG00339,HG00343,HG00345,HG00346,HG00353,HG00361,HG00367,HG00369,HG00372,HG00377,HG00419,HG00437,HG00443,HG00448,HG00473,HG00476,HG00478,HG00500,HG00501,HG00512,HG00524,HG00525,HG00534,HG00542,HG00554,HG00557,HG00583,HG00584,HG00593,HG00613,HG00619,HG00620,HG00634,HG00650,HG00653,HG00654,HG00656,HG00662,HG00683,HG00684,HG00690,HG00692,HG00699,HG00701,HG00737,HG00740,HG01048,HG01052,HG01067,HG01075,HG01082,HG01083,HG01113,HG01124,HG01125,HG01133,HG01137,HG01140,HG01174,HG01250,HG01360,HG01366,HG01374,HG01377,HG01465,HG01491,HG01518,HG01521,HG01522,HG01551,NA07357,NA10847,NA10851,NA11830,NA11881,NA11894,NA11920,NA11932,NA11993,NA12003,NA12004,NA12044,NA12045,NA12046,NA12058,NA12144,NA12156,NA12275,NA12283,NA12286,NA12414,NA12749,NA12761,NA12763,NA12827,NA12828,NA12829,NA12830,NA12891,NA18486,NA18501,NA18507,NA18517,NA18519,NA18520,NA18534,NA18541,NA18547,NA18548,NA18557,NA18558,NA18559,NA18561,NA18565,NA18567,NA18572,NA18577,NA18582,NA18595,NA18596,NA18597,NA18599,NA18602,NA18606,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18623,NA18632,NA18633,NA18636,NA18853,NA18861,NA18909,NA18933,NA18940,NA18942,NA18943,NA18945,NA18948,NA18953,NA18956,NA18960,NA18961,NA18965,NA18972,NA18975,NA18980,NA18983,NA18987,NA19004,NA19009,NA19083,NA19087,NA19088,NA19114,NA19116,NA19160,NA19210,NA19239,NA19313,NA19316,NA19319,NA19328,NA19331,NA19381,NA19394,NA19428,NA19445,NA19449,NA19466,NA19467,NA19663,NA19664,NA19670,NA19728,NA19732,NA19749,NA19773,NA19777,NA19789,NA20278,NA20314,NA20504,NA20507,NA20520,NA20524,NA20529,NA20541,NA20586,NA20752,NA20773 esv3386001 1 19488224 19488233 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863679 M 185 1 0 "" NA12005 nsv470703 1 19523162 19577717 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547716 M 443 1 0 "" HGDP01049 nsv508991 1 19567574 19705911 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621085 M 4 1 0 "" NA15510 esv2665636 1 19568850 19575637 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5484167 M 1151 0 1 "" NA20754 esv3309260 1 19571786 19571787 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7837805,essv7838466,essv7838020 M 185 3 0 "" NA12878,NA12891,NA12892 esv3335212 1 19571787 19571800 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673879,essv8673878 M 185 2 0 "" NA19238,NA19240 esv1007512 1 19603735 19620316 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565353 M 3 0 0 "" HuRef nsv945809 1 19607522 19608469 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1755421,nssv1755374,nssv1755340,nssv1755358,nssv1755415,nssv1755411,nssv1755338,nssv1755377,nssv1755343,nssv1755406,nssv1755350,nssv1755427,nssv1755344,nssv1755390,nssv1755420,nssv1755429,nssv1755347,nssv1755373,nssv1755352,nssv1755434,nssv1755424,nssv1755379,nssv1755353,nssv1755383,nssv1755419,nssv1755387,nssv1755346,nssv1755378,nssv1755342,nssv1755375,nssv1755349,nssv1755430,nssv1755423,nssv1755426,nssv1755351,nssv1755393,nssv1755416,nssv1755357,nssv1755341,nssv1755407,nssv1755339,nssv1755414,nssv1755348,nssv1755408,nssv1755354,nssv1755428,nssv1755355,nssv1755388,nssv1755418,nssv1755372,nssv1755417,nssv1755404,nssv1755345,nssv1755402,nssv1755356,nssv1755398,nssv1755364,nssv1755362,nssv1755361,nssv1755400,nssv1755422,nssv1755363,nssv1755384,nssv1755405,nssv1755399,nssv1755389,nssv1755381,nssv1755371,nssv1755380,nssv1755431,nssv1755425,nssv1755403,nssv1755365,nssv1755359,nssv1755413,nssv1755385,nssv1755367,nssv1755366,nssv1755382,nssv1755392,nssv1755432,nssv1755386,nssv1755409,nssv1755376,nssv1755391,nssv1755368,nssv1755369,nssv1755396,nssv1755360,nssv1755337,nssv1755412,nssv1755410,nssv1755401,nssv1755433,nssv1755370,nssv1755395,nssv1755394 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv159533 1 19628384 19628449 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178111 M 24 "" esv2395760 1 19642800 19643233 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4876743 M 1 0 1 "" NA18507 esv7640 1 19642853 19643005 CNV gain Ahn_et_al_2009 19470904 Sequencing essv30081 M 1 0 0 "" esv2665804 1 19642973 19643117 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6511055,essv5481825,essv6576085,essv6397529,essv6426654,essv5781165,essv6554793,essv5459437,essv6477665,essv5792817,essv6502108,essv6358926,essv6504015,essv6295411,essv6560099,essv6408548,essv6050765,essv6321951,essv5676047,essv5688136,essv6036115,essv5726227,essv6091084,essv6137860,essv5759792,essv5772995,essv6118858,essv5931890,essv5406583,essv5866477,essv5875277,essv6003600,essv5663368,essv5879207,essv5605740,essv6232076,essv5652595,essv6096985,essv6164313,essv5527392,essv6299994,essv5523208,essv5923218,essv5639250,essv5512168,essv6052525,essv5428971,essv6069894 M 1151 0 48 "" HG00103,HG00325,HG00344,HG00475,HG00524,HG00654,HG00683,HG01048,HG01066,HG01107,HG01108,HG01134,HG01171,HG01174,HG01390,NA18486,NA18489,NA18510,NA18532,NA18543,NA18907,NA18934,NA19093,NA19116,NA19190,NA19197,NA19360,NA19372,NA19374,NA19375,NA19377,NA19381,NA19382,NA19383,NA19384,NA19385,NA19393,NA19394,NA19398,NA19399,NA19404,NA19436,NA19451,NA19774,NA20127,NA20340,NA20344,NA20796 nsv954899 1 19644207 19668507 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003148 M 1 0 1 "" BILGI_BIOE nsv474503 1 19653342 19653342 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013748 M 9 1 0 "" NA18956 nsv545729 1 19657434 19666020 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711284 M 17421 0 1 "" esv22015 1 19763983 19765469 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11329 M 40 0 1 "" NA18861 esv3450715 1 19769930 19770164 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8699413 M 185 1 0 "" NA12878 nsv460717 1 19910238 19924306 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537249 M 1557 0 1 "" NINDS_168 nsv545730 1 19910238 19924306 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173791 M 17421 0 1 "" NINDS_168 esv3355181 1 19930590 19930608 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8898737,essv8898731,essv8898733,essv8898732,essv8898734,essv8898740,essv8898729,essv8898741,essv8898739,essv8898738,essv8898730,essv8898735 M 185 12 0 "" NA06986,NA07357,NA11830,NA11881,NA12154,NA12249,NA12717,NA18571,NA18593,NA18603,NA18609,NA18948 esv2564092 1 19932112 19933220 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5284149 M 1 1 0 "" NA18507 dgv27e199 1 19959944 19962177 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2660117,esv2673958 M 1151 0 2 "" NA18984,NA19007 nsv527818 1 19979394 20053652 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv704313 M 2026 1 0 "" nsv545731 1 19989106 20776306 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711285 M 17421 1 0 "" nsv5520 1 20071053 20115978 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5380 M 9 0 1 "" NA19129 esv2435763 1 20079855 20084614 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5290042 M 1 0 1 "" NA18507 esv2164449 1 20080469 20084306 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4803624 M 1 0 1 "" NA18507 esv2665474 1 20080592 20084194 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6291991,essv6533474,essv5821285,essv6515285,essv5760173,essv6145917,essv5474749,essv5837270,essv5835649 M 1151 0 9 "" NA18517,NA18871,NA19129,NA19190,NA19248,NA19390,NA19463,NA19654,NA19900 esv25446 1 20080605 20084179 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv21099 M 40 0 3 "" NA18517,NA19129,NA19190 nsv519515 1 20081688 20082881 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv689562,nssv693891,nssv656533,nssv674889 M 2026 0 4 "" esv1003821 1 20104576 20116485 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564297 M 3 0 1 "" HuRef nsv945810 1 20152642 20161876 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763203,nssv1755680,nssv1755717,nssv1763211,nssv1755436,nssv1755675,nssv1755441,nssv1755661,nssv1755448,nssv1755674,nssv1755442,nssv1755684,nssv1755659,nssv1755701,nssv1755719,nssv1755691,nssv1755656,nssv1763201,nssv1755438,nssv1755660,nssv1763199,nssv1755669,nssv1763200,nssv1755667,nssv1755444,nssv1755435,nssv1755440,nssv1755670,nssv1755447,nssv1755703,nssv1755657,nssv1763206,nssv1755449,nssv1755666,nssv1755718,nssv1755710,nssv1755445,nssv1755702,nssv1763198,nssv1755668,nssv1755437,nssv1755698,nssv1755446,nssv1755692,nssv1755439,nssv1763204,nssv1755443,nssv1763208,nssv1755450,nssv1755686,nssv1763202,nssv1763205,nssv1755720,nssv1755700,nssv1755658,nssv1755694,nssv1755673,nssv1763213,nssv1755664,nssv1755672,nssv1755704,nssv1755679,nssv1755688,nssv1755706,nssv1755714,nssv1755697,nssv1755689,nssv1755716,nssv1763212,nssv1755671,nssv1755685,nssv1755665,nssv1755695,nssv1755683,nssv1755705,nssv1755676,nssv1755707,nssv1755677,nssv1755693,nssv1755715,nssv1755711,nssv1763207,nssv1755663,nssv1755681,nssv1763210,nssv1755687,nssv1755712,nssv1755690,nssv1755709,nssv1755662,nssv1755699,nssv1755682,nssv1763209,nssv1755696,nssv1755713,nssv1755678,nssv1755708 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2606339 1 20170316 20171678 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5295790 M 1 0 1 "" NA18507 esv2380061 1 20170508 20171428 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4621106 M 1 0 1 "" NA18507 esv2674305 1 20170696 20171244 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6359341,essv5859223,essv5640472,essv5628913,essv6248930,essv6215104,essv5499207,essv5678867,essv6379449,essv6126763,essv5576160,essv6317774,essv5828502,essv5882383,essv5741907,essv5744083,essv5825255,essv5833762,essv6174027,essv6444298,essv5931692,essv5533443,essv5739202,essv5807407,essv5848077,essv6461707,essv6585594,essv5761706,essv6146226,essv6527922,essv6205933,essv5690138,essv5811876,essv5887773,essv5833887,essv5790037,essv5426160,essv6288203,essv6488897,essv6168214,essv5470467,essv6024083,essv5758005,essv6173243,essv5985987,essv5734667,essv5802403,essv5729622,essv6455974,essv5826395,essv6418963,essv5841113,essv6237961,essv5420129,essv5984146,essv5672697,essv5526620,essv6066631,essv5885421,essv6515092,essv6209303,essv6558494,essv6106708,essv5864897,essv5763251,essv6505583,essv5830619,essv5812424,essv6443840,essv5732812,essv5999134,essv5861282,essv6260426,essv5927148,essv6523208,essv6582638,essv6553543,essv5742905,essv6156014,essv5898611,essv5807104,essv5548216,essv5822577,essv5645938,essv5994808,essv6468002,essv6111390,essv5830785,essv5687687,essv5707580,essv5749697,essv6369149,essv6393786,essv5789530,essv6037922,essv6281719,essv5767841,essv5816191,essv5675735,essv6589463,essv5428448,essv6178870,essv5515606,essv5696823,essv5458547,essv5973010,essv6295662,essv6545711,essv6525136,essv5700124,essv5905453,essv6227949,essv6597200,essv5402368,essv5550212,essv5934359,essv6378443,essv6251699,essv6026232,essv5408799,essv6225022,essv5905206,essv6234925,essv5469079,essv6051400,essv5866475,essv6395277,essv5655903,essv5859723,essv6442812,essv6356710,essv5504163,essv6079286,essv6114740,essv6469395,essv6424152,essv5905007,essv5667866,essv6260831,essv5958099,essv6510213,essv5885757,essv5560105,essv6545892,essv5636122,essv6423702,essv6128857,essv5900631,essv5887205,essv5656975,essv6561292,essv5420974,essv5975806,essv6104301,essv6160665,essv5918889,essv5930820,essv6102601,essv5469661,essv6502082,essv6201168,essv6239053,essv6589632,essv5671785,essv6573679,essv6535284,essv5884253,essv6208024,essv6359596,essv5612185,essv6190844,essv6240908,essv5433733,essv6249313,essv5662963,essv5500187,essv6381398,essv6016378,essv5434151,essv5841476,essv5641653,essv5924639,essv6322211,essv5468773,essv6580103,essv6359619,essv5907651,essv5602717,essv6124609,essv6585776,essv6446714,essv6547847,essv6089174,essv6517871,essv5423291,essv5896679,essv6491599,essv5530247,essv5471457,essv5410324,essv5520628,essv6227831,essv6087089,essv6034059,essv6495603,essv5578373,essv5946473,essv5576538,essv6112671,essv5619101,essv6511354,essv6065859,essv5569196,essv6565376,essv5945934,essv6357832,essv6122097,essv6264007,essv5851510,essv6589894,essv5588541,essv5576319,essv6262415,essv6171897,essv5472356,essv6033012,essv6135747,essv5402346,essv6138021,essv5886149,essv6588608,essv6154907,essv6454113,essv6023297,essv6385212,essv6224351,essv6290536,essv5583052,essv6442756,essv5991652,essv5600177,essv6111213,essv5643449,essv5916238,essv5560633,essv6511384,essv5547554,essv6389578 M 1151 0 248 "" HG00100,HG00103,HG00108,HG00117,HG00120,HG00123,HG00124,HG00126,HG00133,HG00137,HG00139,HG00148,HG00150,HG00152,HG00154,HG00158,HG00186,HG00187,HG00190,HG00242,HG00245,HG00249,HG00251,HG00254,HG00259,HG00262,HG00265,HG00270,HG00273,HG00282,HG00284,HG00309,HG00313,HG00323,HG00334,HG00344,HG00357,HG00368,HG00422,HG00437,HG00463,HG00464,HG00475,HG00500,HG00512,HG00524,HG00534,HG00536,HG00537,HG00542,HG00543,HG00560,HG00565,HG00566,HG00577,HG00584,HG00596,HG00607,HG00608,HG00610,HG00613,HG00619,HG00629,HG00635,HG00653,HG00672,HG00689,HG00690,HG00701,HG00705,HG00732,HG01047,HG01051,HG01066,HG01080,HG01102,HG01107,HG01136,HG01140,HG01149,HG01170,HG01174,HG01177,HG01374,HG01384,HG01390,HG01491,HG01492,HG01550,NA07000,NA07037,NA07051,NA07357,NA11829,NA11881,NA11894,NA11918,NA11920,NA11932,NA11933,NA11994,NA12275,NA12347,NA12348,NA12399,NA12400,NA12414,NA12489,NA12717,NA12750,NA12775,NA12778,NA12827,NA12842,NA12892,NA18486,NA18498,NA18502,NA18511,NA18519,NA18520,NA18522,NA18526,NA18532,NA18536,NA18541,NA18543,NA18559,NA18563,NA18592,NA18593,NA18595,NA18596,NA18597,NA18606,NA18609,NA18621,NA18623,NA18626,NA18628,NA18637,NA18853,NA18856,NA18858,NA18861,NA18907,NA18908,NA18910,NA18912,NA18923,NA18924,NA18941,NA18944,NA18952,NA18953,NA18959,NA18963,NA18964,NA18982,NA18987,NA18990,NA18991,NA19007,NA19012,NA19059,NA19064,NA19074,NA19075,NA19077,NA19093,NA19114,NA19116,NA19130,NA19138,NA19172,NA19190,NA19213,NA19225,NA19238,NA19239,NA19257,NA19317,NA19360,NA19371,NA19372,NA19376,NA19383,NA19394,NA19396,NA19397,NA19399,NA19404,NA19431,NA19444,NA19445,NA19446,NA19449,NA19452,NA19453,NA19455,NA19457,NA19462,NA19466,NA19472,NA19657,NA19664,NA19700,NA19701,NA19707,NA19713,NA19717,NA19720,NA19750,NA19776,NA19818,NA19834,NA19901,NA19920,NA19982,NA20332,NA20344,NA20356,NA20503,NA20513,NA20514,NA20518,NA20521,NA20525,NA20533,NA20543,NA20582,NA20756,NA20760,NA20766,NA20768,NA20770,NA20771,NA20778,NA20795,NA20796,NA20798,NA20801,NA20802,NA20807,NA20808,NA20813,NA20818,NA20828 esv26523 1 20170736 20171296 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv11635 M 40 0 1 "" NA18858 esv2674003 1 20172236 20174073 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5773198 M 1151 0 1 "" NA18505 esv26309 1 20172511 20174305 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10552 M 40 0 1 "" NA18505 esv1000843 1 20215136 20218963 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565754 M 3 0 1 "" HuRef dgv179n54 1 20229536 20279827 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545733,nsv545732 M 17421 0 2 "" nsv818100 1 20274519 20278466 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417739 M 112 0 1 "" NA19003 esv24128 1 20288138 20289574 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv16821 M 40 1 0 "" NA11993 esv2762277 1 20304341 20309206 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7007966 M 1109 0 1 "" SW_0820 esv2669937 1 20316471 20317373 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5510095 M 1151 0 1 "" NA19380 nsv5631 1 20338339 20381133 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5386,nssv3933 M 9 2 0 "" NA12878,NA19129 esv2513498 1 20382084 20383007 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5214092 M 1 1 0 "" NA18507 esv3347293 1 20382172 20382870 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692107 M 185 1 0 "" NA19240 esv3366225 1 20453672 20455370 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692109 M 185 1 0 "" NA19238 dgv62e59 1 20453772 20454970 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3325828,esv3444591 M 185 2 0 "" NA19239,NA19240 esv2560487 1 20463369 20463818 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5314979 M 1 1 0 "" NA18507 nsv512724 1 20463489 20463595 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625349 M 1 1 0 "" 1 nsv821943 1 20479518 20492154 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1426380 M 31 1 0 "" AK6 nsv954900 1 20484308 20487407 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003149 M 1 0 1 "" BILGI_BIOE esv3385515 1 20498433 20498433 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8638738 M 185 0 0 "" nsv945811 1 20525997 20527469 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763292,nssv1763269,nssv1763231,nssv1763236,nssv1763226,nssv1763251,nssv1763216,nssv1763274,nssv1763224,nssv1763275,nssv1763229,nssv1763273,nssv1763300,nssv1763306,nssv1763297,nssv1763255,nssv1763296,nssv1763303,nssv1763233,nssv1763244,nssv1763232,nssv1763263,nssv1763228,nssv1763240,nssv1763291,nssv1763234,nssv1763230,nssv1763260,nssv1763227,nssv1763238,nssv1763215,nssv1763271,nssv1763218,nssv1763270,nssv1763295,nssv1763284,nssv1763221,nssv1763278,nssv1763293,nssv1763247,nssv1763225,nssv1763242,nssv1763217,nssv1763289,nssv1763220,nssv1763245,nssv1763222,nssv1763304,nssv1763219,nssv1763266,nssv1763223,nssv1763279,nssv1763299,nssv1763261,nssv1763294,nssv1763287,nssv1763302,nssv1763243,nssv1763298,nssv1763248,nssv1763276,nssv1763268,nssv1763265,nssv1763283,nssv1763309,nssv1763250,nssv1763285,nssv1763253,nssv1763305,nssv1763246,nssv1763259,nssv1763257,nssv1763307,nssv1763288,nssv1763214,nssv1763258,nssv1763310,nssv1763254,nssv1763264,nssv1763256,nssv1763249,nssv1763277,nssv1763252,nssv1763301,nssv1763239,nssv1763308,nssv1763262,nssv1763290,nssv1763235,nssv1763282,nssv1763237,nssv1763267,nssv1763281,nssv1763286,nssv1763241,nssv1763280,nssv1763272 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2666516 1 20537539 20538253 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6512414,essv6048600,essv6508551,essv6162102,essv6467170,essv6385765,essv6452883,essv6402543,essv6539682,essv5700553,essv6484071,essv6252992,essv6575030,essv6124937,essv6577434,essv5693951,essv6525808,essv5677582,essv6479738,essv5792781,essv6451843,essv6364464,essv6493657,essv6097162,essv6236836,essv5566968,essv5747728,essv6435697,essv6336884,essv6164230,essv6096258,essv5747090,essv6138285,essv5545226,essv5730927,essv5952106,essv5610021,essv5664172,essv5576176,essv5748798,essv6171369,essv5820883,essv6399228,essv6389030,essv5884238,essv5782824,essv5662994,essv6252171,essv5837165,essv6027573,essv5670667,essv6115128,essv6377930,essv5911912,essv5477050,essv6196064,essv5935990,essv6258354,essv5839828,essv5630370,essv6006154,essv5656747,essv6252389,essv5960035,essv5480391,essv5925105,essv5915222,essv6343220,essv6044805,essv6445054,essv5540106,essv5537001,essv5935916,essv5400794,essv5969944,essv5862950,essv5716749,essv6175706,essv6413604,essv5865398 M 1151 0 80 "" HG00096,HG00100,HG00106,HG00123,HG00136,HG00140,HG00179,HG00183,HG00243,HG00247,HG00249,HG00250,HG00251,HG00258,HG00265,HG00275,HG00281,HG00313,HG00345,HG00346,HG00373,HG00449,HG00578,HG00581,HG00589,HG00635,HG00672,HG00689,HG01066,HG01198,HG01350,HG01383,HG01384,HG01498,NA06994,NA07051,NA07346,NA10847,NA10851,NA11843,NA11931,NA12003,NA12043,NA12154,NA12287,NA12348,NA12400,NA12489,NA12718,NA12776,NA18550,NA18561,NA18570,NA18577,NA18605,NA18619,NA18621,NA18627,NA18960,NA18974,NA19010,NA19059,NA19062,NA19448,NA19652,NA19681,NA19717,NA19750,NA19776,NA19786,NA20534,NA20581,NA20586,NA20757,NA20758,NA20773,NA20774,NA20783,NA20800,NA20813 nsv478723 1 20550654 20550654 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010858 M 9 1 0 "" NA18507 nsv460729 1 20567472 20592419 CNV gain Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537251 M 1557 1 0 "" HGDP00552 nsv545734 1 20567472 20592419 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173792 M 17421 1 0 "" HGDP00552 esv2750602 1 20587799 20588624 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95034 M 51 0 1 "" 22231 nsv528156 1 20589208 20608303 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv704704 M 2026 0 1 "" esv998962 1 20598896 20604674 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565384 M 3 0 1 "" HuRef nsv511682 1 20605133 20606314 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626320 M 1 0 1 "" 1 esv2662052 1 20605528 20606210 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6544710,essv5835891,essv6587964,essv5994467,essv6304936,essv6224087,essv6542303,essv5523972,essv6353329,essv5598538,essv6303497,essv5402906,essv6573741,essv5988819,essv6309141,essv5744037,essv6362714,essv5942273,essv6564038,essv5691789,essv6287642,essv6250228,essv6301018,essv6200201,essv6573247,essv5654792,essv6326930,essv5429995,essv6516888,essv6108595,essv6302367,essv5541555,essv6443022,essv5587418,essv6523695,essv5966325,essv6345672,essv5785715,essv6267779,essv5747584,essv6570891,essv5782020,essv6541489,essv6212909,essv6552307,essv5811222,essv6492742,essv5722882,essv6563347,essv6152435,essv6574576,essv5438604,essv6320404,essv5735089,essv6492211,essv6136286,essv6577306,essv5852592,essv6438164,essv5704637,essv6572781,essv5694999,essv6255633,essv5792848,essv6370159,essv5794174,essv6446467,essv5542101,essv6451269,essv5741046,essv6591096,essv6120485,essv6518215,essv5926916,essv6510741,essv5677097,essv6320451,essv5736333,essv6574194,essv5694564,essv6312618,essv5680664,essv6500341,essv5811874,essv6263204,essv5823925,essv6518744,essv5756679,essv6360073,essv5615755,essv6341898,essv5680691,essv6400883,essv5971355,essv6496663,essv5524287,essv6325124,essv5788383,essv6398621,essv5719383,essv6500839,essv5784967,essv6508337,essv5714832,essv6492796,essv5541113,essv6360623,essv6056620,essv6306421,essv5756384,essv6416548,essv5749467,essv6353846,essv5740556,essv6330699,essv5703696,essv6292633,essv6220008,essv6361825,essv5778072,essv6403490,essv5816528,essv6438711,essv5816688,essv6494487,essv6153110,essv6368083,essv6237024,essv6456623,essv5416571,essv6564016,essv5670435,essv6364970,essv6098705,essv6548793,essv6005883,essv6364101,essv5523510,essv6368023,essv5816332,essv6361014,essv5769349,essv6346408,essv5697499,essv6402968,essv5458729,essv6374313,essv5682478,essv6503564,essv5769073,essv6582095,essv5760311,essv6299749,essv5784312,essv6275823,essv5778151,essv6527287,essv5751143,essv6382905,essv5783140,essv6334263,essv5969357,essv6379903,essv5724648,essv6418450,essv5715935,essv6438354,essv5422410,essv6265404,essv5818983,essv6496266,essv5779017,essv6400914,essv5783168,essv6564891,essv5722306,essv6307078,essv5811096,essv6318683,essv5403437,essv6291874,essv5496598,essv6529888,essv6254947,essv6454477,essv5498011,essv6409483,essv6194858,essv6299388,essv5659744,essv6430305,essv5424711,essv6292225,essv6186558,essv6430975,essv5983099,essv6393006,essv5770146,essv6458202,essv6175850,essv6481797,essv6019783,essv6381478,essv6098042,essv6458803,essv5474373,essv6564496,essv5572605,essv6568029,essv6045619,essv5442437,essv5967351,essv5459012,essv6138679,essv5487006,essv6148007,essv5565651,essv5529439,essv5888779,essv5857844,essv6164775,essv5876053,essv6120057,essv6079307,essv5425926,essv5878348,essv5863752,essv5424286,essv5928710,essv6190086,essv6081416,essv5845284,essv5851825,essv5418410,essv5608227,essv6065949,essv6222217,essv5607865,essv5940836,essv6232916,essv6130991,essv5656480,essv6019561,essv5412726,essv5510105,essv6031650,essv5933672,essv6018103,essv5905508,essv5473856,essv6149811,essv6209410,essv5541944,essv5868366,essv5580091,essv5919387,essv5909672,essv6204799,essv5879759,essv5515735,essv5572999,essv5990544,essv5585858,essv6079603,essv6117694,essv5881823,essv5633996,essv6031034,essv5943530,essv5423115,essv5656889,essv5849793,essv6161004,essv5664725,essv5951665,essv6214037,essv5401619,essv5490529,essv5449560,essv6242935,essv5496811,essv5489417,essv6167763,essv5440277,essv5528281,essv6235589,essv6038952,essv6008394,essv5869539,essv5870497,essv5540643,essv6241710,essv5642986,essv5698404,essv5413866,essv5920190,essv5605354,essv6016217,essv6124623,essv5944129,essv6048428,essv6060776,essv6241040,essv6012887,essv6129397,essv5842995,essv6188391,essv5672844,essv5859251,essv6011390,essv5997307,essv6006923,essv5493535,essv5857210,essv5568623,essv6200060,essv5504469,essv6248588,essv5591420,essv5943189,essv6052811 M 1151 0 321 "" HG00108,HG00114,HG00116,HG00118,HG00126,HG00131,HG00136,HG00137,HG00143,HG00146,HG00150,HG00151,HG00154,HG00156,HG00158,HG00159,HG00173,HG00174,HG00176,HG00177,HG00178,HG00179,HG00180,HG00181,HG00182,HG00186,HG00188,HG00190,HG00231,HG00232,HG00242,HG00243,HG00247,HG00251,HG00252,HG00253,HG00254,HG00260,HG00261,HG00262,HG00264,HG00265,HG00266,HG00267,HG00269,HG00271,HG00272,HG00273,HG00274,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00306,HG00310,HG00311,HG00312,HG00315,HG00318,HG00319,HG00320,HG00321,HG00323,HG00324,HG00325,HG00326,HG00327,HG00328,HG00330,HG00331,HG00334,HG00335,HG00336,HG00337,HG00338,HG00339,HG00344,HG00346,HG00357,HG00366,HG00368,HG00369,HG00403,HG00404,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00472,HG00473,HG00475,HG00478,HG00479,HG00500,HG00501,HG00513,HG00530,HG00531,HG00533,HG00534,HG00553,HG00554,HG00556,HG00559,HG00565,HG00566,HG00577,HG00578,HG00584,HG00589,HG00592,HG00593,HG00595,HG00596,HG00607,HG00608,HG00610,HG00613,HG00614,HG00619,HG00620,HG00625,HG00626,HG00629,HG00634,HG00635,HG00637,HG00638,HG00650,HG00651,HG00653,HG00656,HG00672,HG00683,HG00684,HG00689,HG00698,HG00699,HG00701,HG00707,HG00708,HG00732,HG00734,HG00740,HG01047,HG01048,HG01051,HG01060,HG01061,HG01066,HG01067,HG01070,HG01072,HG01073,HG01083,HG01107,HG01124,HG01125,HG01136,HG01137,HG01140,HG01148,HG01149,HG01173,HG01174,HG01188,HG01190,HG01350,HG01351,HG01354,HG01366,HG01374,HG01383,HG01437,HG01440,HG01461,HG01465,HG01489,HG01491,NA11893,NA11994,NA12058,NA12155,NA12273,NA12275,NA12340,NA12400,NA12718,NA18523,NA18530,NA18534,NA18536,NA18541,NA18543,NA18549,NA18557,NA18559,NA18561,NA18566,NA18576,NA18577,NA18579,NA18582,NA18595,NA18596,NA18597,NA18599,NA18602,NA18603,NA18612,NA18613,NA18615,NA18616,NA18619,NA18624,NA18628,NA18631,NA18633,NA18637,NA18638,NA18867,NA18868,NA18874,NA18908,NA18910,NA18941,NA18961,NA18963,NA18982,NA18987,NA18990,NA18999,NA19003,NA19004,NA19007,NA19009,NA19055,NA19056,NA19058,NA19064,NA19072,NA19080,NA19081,NA19082,NA19084,NA19085,NA19107,NA19130,NA19213,NA19247,NA19248,NA19312,NA19360,NA19373,NA19374,NA19377,NA19381,NA19383,NA19391,NA19395,NA19397,NA19401,NA19428,NA19431,NA19440,NA19443,NA19445,NA19452,NA19453,NA19455,NA19457,NA19461,NA19468,NA19470,NA19473,NA19648,NA19652,NA19654,NA19655,NA19657,NA19661,NA19663,NA19664,NA19675,NA19676,NA19678,NA19679,NA19681,NA19684,NA19685,NA19700,NA19704,NA19712,NA19713,NA19719,NA19722,NA19723,NA19726,NA19749,NA19750,NA19755,NA19762,NA19773,NA19774,NA19780,NA19834,NA19916,NA19920,NA19982,NA20510,NA20518,NA20586,NA20778,NA20819 esv2853125 1 20605659 20606334 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7122692 M 1 0 1 "" HuRef esv24339 1 20606024 20607151 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv19697 M 40 0 1 "" NA18517 esv2667482 1 20606193 20607400 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6560816,essv6137654,essv6196714,essv5544381,essv5518407,essv5433646 M 1151 0 6 "" HG00578,HG00581,HG00635,NA11920,NA18561,NA18574 nsv834369 1 20609770 20779837 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443885,nssv1443896 M 95 0 2 "" esv3371341 1 20618235 20618254 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593746,essv9593713,essv9593735,essv9593724 M 185 4 0 "" NA11881,NA12287,NA12814,NA12815 esv3305877 1 20618244 20618245 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7768893,essv7767205,essv7766435,essv7769259,essv7765711,essv7766905 M 185 6 0 "" NA11881,NA11931,NA12045,NA12287,NA12814,NA12815 esv3359351 1 20623384 20624839 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652061 M 185 1 0 "" NA19240 esv2633764 1 20623404 20623792 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5230908 M 1 1 0 "" NA18507 esv2499678 1 20625330 20626923 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5192304 M 1 0 1 "" NA18507 esv3920 1 20625769 20626285 CNV loss Wang_et_al_2008 18987735 Sequencing essv26361 M 1 0 1 "" YH esv1075995 1 20625995 20626175 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3629701 M 2 0 1 "" HuRef nsv522796 1 20668459 20676233 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698440 M 2026 0 1 "" nsv520013 1 20684689 20728233 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697177 M 2026 0 1 "" esv2667782 1 20691561 20692970 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5863408,essv6550563,essv5798637,essv6557917,essv5691986,essv6594100,essv6400707,essv6214188,essv5731404,essv6369625,essv6182331,essv6092160,essv5780634,essv5780664,essv5525773,essv5646836,essv6494223,essv5602906,essv5547289,essv5658876,essv5928540,essv6292798,essv6414528,essv5883895 M 1151 0 24 "" NA10847,NA11930,NA11932,NA11994,NA12348,NA12748,NA12761,NA12827,NA12829,NA12889,NA18519,NA18522,NA18547,NA18550,NA18572,NA18608,NA18853,NA18912,NA18943,NA18952,NA18956,NA20761,NA20772,NA20812 nsv5742 1 20758394 20793518 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3942 M 9 1 0 "" NA12878 esv1356855 1 20816056 20816498 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3611504 M 2 0 1 "" HuRef nsv474786 1 20857163 20857163 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019071 M 9 1 0 "" NA19240 esv2669682 1 20919866 20920027 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5778335,essv5988728,essv5924971,essv6064844 M 1151 0 4 "" HG00136,HG00284,HG00318,HG00323 esv3387129 1 21000595 21000603 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863680 M 185 1 0 "" NA12005 esv2675549 1 21017468 21018545 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5880328,essv5864480,essv5523132 M 1151 0 3 "" NA19373,NA19374,NA19463 esv2672607 1 21019842 21020448 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5786414 M 1151 0 1 "" NA19374 nsv834380 1 21072777 21247948 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1443907 M 95 1 0 "" nsv160811 1 21101576 21104880 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179389 M 24 "" esv1007787 1 21158299 21159954 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565532 M 3 1 0 "" HuRef nsv954990 1 21179720 21179885 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000458 M 1 0 1 "" BILGI_BIOE esv1000397 1 21194674 21213411 OTHER inversion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565165 M 3 0 0 "" HuRef esv1387368 1 21210604 21211026 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3804670 M 2 0 1 "" HuRef nsv545735 1 21215242 21221575 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711288 M 17421 0 1 "" esv1006358 1 21247323 21259851 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564803 M 3 0 1 "" HuRef esv2109865 1 21300825 21301243 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4765838 M 1 0 1 "" NA18507 nsv515620 1 21330669 21330746 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv656270,nssv664134 M 2026 0 2 "" esv23912 1 21332335 21332955 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14361 M 40 0 1 "" NA19225 esv2671442 1 21358479 21360821 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6068623,essv6591962,essv5520850 M 1151 0 3 "" HG00501,HG00512,HG00524 esv34155 1 21367084 21840123 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990706 M 270 0 0 "" esv26055 1 21370997 21488669 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv14172,esv11019,esv14152 M 40 8 0 "" NA15510,NA18502,NA18511,NA18523,NA18907,NA18909,NA18916,NA19225 nsv945812 1 21399201 21431589 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763319,nssv1763377,nssv1763327,nssv1763370,nssv1763323,nssv1763381,nssv1763328,nssv1763406,nssv1763321,nssv1763351,nssv1763326,nssv1763344,nssv1763394,nssv1763384,nssv1763314,nssv1763334,nssv1763393,nssv1763369,nssv1763325,nssv1763379,nssv1763313,nssv1763399,nssv1763329,nssv1763398,nssv1763388,nssv1763341,nssv1763330,nssv1763359,nssv1763324,nssv1763373,nssv1763397,nssv1763360,nssv1763315,nssv1763311,nssv1763312,nssv1763348,nssv1763318,nssv1763386,nssv1763392,nssv1763368,nssv1763322,nssv1763383,nssv1763390,nssv1763366,nssv1763317,nssv1763402,nssv1763389,nssv1763376,nssv1763320,nssv1763403,nssv1763316,nssv1763367,nssv1763396,nssv1763387,nssv1763391,nssv1763357,nssv1763401,nssv1763338,nssv1763340,nssv1763405,nssv1763363,nssv1763378,nssv1763337,nssv1763335,nssv1763358,nssv1763339,nssv1763365,nssv1763331,nssv1763349,nssv1763375,nssv1763380,nssv1763362,nssv1763332,nssv1763372,nssv1763347,nssv1763361,nssv1763385,nssv1763345,nssv1763407,nssv1763342,nssv1763404,nssv1763343,nssv1763356,nssv1763336,nssv1763353,nssv1763382,nssv1763374,nssv1763364,nssv1763346,nssv1763352,nssv1763395,nssv1763354,nssv1763350,nssv1763333,nssv1763371,nssv1763400,nssv1763355 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2673455 1 21402293 21402664 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6384977,essv5422558,essv6394063,essv6074796,essv6326047,essv5453123 M 1151 0 6 "" NA18501,NA18504,NA18853,NA19704,NA19901,NA20287 nsv820559 1 21408979 21488669 CNV duplication Ju_et_al_2010 20802225 Sequencing nssv1420269 M 1 1 0 "" NA10851 esv2758926 1 21409691 21615921 CNV gain+loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757726 M 270 1 1 "" NA19154,NA19173 nsv428432 1 21409691 21615921 CNV gain Perry_et_al_2008b 18775914 BAC aCGH,FISH,PCR nssv454609,nssv454587,nssv454598,nssv454565,nssv454620,nssv454554,nssv454576 M 62 7 0 "" HGDP00460,HGDP00463,HGDP00472,HGDP01093,HGDP01094,NA18916,NA19096 nsv9435 1 21411250 21473702 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv14412,nssv16109,nssv15120 M 31 2 1 "" NA18502,NA19173,NA19221 esv3402744 1 21422672 21427370 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692122 M 185 1 0 "" NA19238 nsv945574 1 21424886 21431589 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570581,nssv2570630,nssv2570574,nssv2570598,nssv2570643,nssv2570602,nssv2570588,nssv2570622,nssv2570577,nssv2570639,nssv2570579,nssv2570568,nssv2570587,nssv2570619,nssv2570646,nssv2570613,nssv2570578,nssv2570610,nssv2570580,nssv2570629,nssv2570583,nssv2570612,nssv2570585,nssv2570626,nssv2570640,nssv2570608,nssv2570586,nssv2571159,nssv2570571,nssv2570604,nssv2570582,nssv2570597,nssv2570589,nssv2570614,nssv2570645,nssv2570627,nssv2570648,nssv2570624,nssv2570642,nssv2570647,nssv2570572,nssv2570625,nssv2570575,nssv2570637,nssv2570641,nssv2570605,nssv2570584,nssv2570621,nssv2570576,nssv2570593,nssv2570649,nssv2570570,nssv2570644,nssv2570617,nssv2570573,nssv2570595,nssv2570634,nssv2571162,nssv2570601,nssv2570600,nssv2570596,nssv2570635,nssv2571165,nssv2570592,nssv2570599,nssv2570611,nssv2570606,nssv2570620,nssv2570616,nssv2571161,nssv2570607,nssv2570623,nssv2570591,nssv2571163,nssv2571164,nssv2570603,nssv2570615,nssv2570594,nssv2570638,nssv2570618,nssv2571167,nssv2571166,nssv2570636,nssv2570633,nssv2570609,nssv2570590,nssv2570628,nssv2570632,nssv2570650,nssv2571158,nssv2570631,nssv2570569 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv954901 1 21427808 21432107 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003150 M 1 0 1 "" BILGI_BIOE esv7069 1 21427810 21480071 OTHER inversion Ahn_et_al_2009 19470904 Sequencing essv29510 M 1 0 0 "" esv2675012 1 21430687 21433771 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6364153,essv5474967,essv5648710,essv6452771,essv6526188,essv6505857 M 1151 0 6 "" HG00186,HG00278,HG00373,NA19676,NA19720,NA20806 nsv945813 1 21440874 21486086 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763424,nssv1763480,nssv1763411,nssv1764120,nssv1763486,nssv1763482,nssv1763420,nssv1763440,nssv1763425,nssv1763477,nssv1764110,nssv1763472,nssv1764109,nssv1763467,nssv1763491,nssv1763430,nssv1763418,nssv1763481,nssv1763419,nssv1763435,nssv1763490,nssv1763461,nssv1763487,nssv1764118,nssv1763422,nssv1763484,nssv1763427,nssv1763451,nssv1763426,nssv1763448,nssv1763485,nssv1763431,nssv1763489,nssv1763447,nssv1763412,nssv1763476,nssv1763409,nssv1763458,nssv1763415,nssv1763452,nssv1763416,nssv1763450,nssv1763421,nssv1764117,nssv1763410,nssv1763456,nssv1763413,nssv1763445,nssv1763414,nssv1763449,nssv1763417,nssv1763466,nssv1763423,nssv1763433,nssv1763488,nssv1763438,nssv1763463,nssv1763429,nssv1764119,nssv1764112,nssv1763473,nssv1763457,nssv1763474,nssv1763408,nssv1763453,nssv1763464,nssv1764114,nssv1763470,nssv1763428,nssv1763436,nssv1763475,nssv1763454,nssv1763437,nssv1764116,nssv1763446,nssv1763441,nssv1763465,nssv1763479,nssv1763483,nssv1763469,nssv1763432,nssv1763434,nssv1763443,nssv1763462,nssv1764113,nssv1763439,nssv1763471,nssv1763444,nssv1763460,nssv1763478,nssv1764111,nssv1763468,nssv1763442,nssv1764108,nssv1764115,nssv1763455,nssv1763459 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2745042 1 21459861 21460288 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829006,essv6839979,essv6801620,essv6832604,essv6847029,essv6776942,essv6689267,essv6766551,essv6773444,essv6843891,essv6703864,essv6753503,essv6675206,essv6933312,essv6916762,essv6793295,essv6910055,essv6714251,essv6816765,essv6950565,essv6921733,essv6722011,essv6764169,essv6679178,essv6718976,essv6917439,essv6937687,essv6738816,essv6797454,essv6954753,essv6883257,essv6895850,essv6961566,essv6769525,essv6733489,essv6695721,essv6929060,essv6925696,essv6710591,essv6692774,essv6801932,essv6914005,essv6761866,essv6750608,essv6756559,essv6742147,essv6789158,essv6744941,essv6877668,essv6946504 M 96 0 50 "" SSM002,SSM003,SSM006,SSM007,SSM010,SSM015,SSM016,SSM017,SSM018,SSM019,SSM020,SSM021,SSM022,SSM024,SSM025,SSM026,SSM027,SSM032,SSM033,SSM036,SSM037,SSM040,SSM042,SSM043,SSM045,SSM049,SSM052,SSM053,SSM055,SSM057,SSM058,SSM059,SSM062,SSM063,SSM064,SSM065,SSM066,SSM067,SSM070,SSM071,SSM072,SSM073,SSM081,SSM082,SSM084,SSM085,SSM086,SSM093,SSM095,SSM099 esv989724 1 21459925 21460196 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3569889 M 3 0 1 "" HuRef esv2456631 1 21459927 21460198 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5375893 M 1 0 1 "" NA18507 esv1311289 1 21459927 21460199 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4347116 M 2 0 1 "" HuRef esv2745053 1 21460841 21461490 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6847030,essv6668962,essv6843887,essv6933313,essv6666905,essv6917441,essv6759053,essv6876920,essv6961567,essv6954754,essv6747790,essv6769526,essv6853247,essv6750610,essv6753504,essv6871721 M 96 0 16 "" SSM011,SSM012,SSM017,SSM021,SSM026,SSM027,SSM030,SSM031,SSM056,SSM057,SSM058,SSM061,SSM065,SSM086,SSM087,SSM091 esv2195718 1 21461058 21461506 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4650166 M 1 0 1 "" NA18507 esv2745064 1 21461173 21461388 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6668962,essv6847030,essv6843887,essv6954754,essv6871721,essv6961567,essv6853247 M 96 0 7 "" SSM011,SSM026,SSM027,SSM031,SSM086,SSM087,SSM091 esv1213372 1 21461252 21461316 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3769496 M 2 0 1 "" HuRef esv2990456 1 21461252 21461316 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7260023 M 1 0 1 "" HuRef nsv160214 1 21461253 21461316 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178792 M 24 "" esv3350627 1 21461572 21468170 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692123 M 185 1 0 "" NA19239 esv2661318 1 21466949 21471723 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5446520 M 1151 0 1 "" HG00427 nsv945575 1 21479674 21480414 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570653,nssv2570655,nssv2570654,nssv2570662,nssv2570651,nssv2570652,nssv2570660,nssv2570661,nssv2570656,nssv2570658,nssv2570657,nssv2570659 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945576 1 21480414 21482690 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2570691,nssv2570669,nssv2570677,nssv2570714,nssv2570692,nssv2570718,nssv2570687,nssv2570672,nssv2570749,nssv2570704,nssv2570678,nssv2570722,nssv2570754,nssv2570667,nssv2570685,nssv2570700,nssv2570745,nssv2570673,nssv2570680,nssv2570707,nssv2570746,nssv2570744,nssv2570693,nssv2570701,nssv2570686,nssv2570735,nssv2570688,nssv2570715,nssv2570683,nssv2570696,nssv2570753,nssv2570725,nssv2570694,nssv2570664,nssv2570679,nssv2570741,nssv2570690,nssv2570724,nssv2570676,nssv2570739,nssv2570751,nssv2570738,nssv2570747,nssv2570717,nssv2570681,nssv2570712,nssv2570748,nssv2570728,nssv2570682,nssv2570698,nssv2570684,nssv2570697,nssv2570750,nssv2570740,nssv2570689,nssv2570711,nssv2570721,nssv2570705,nssv2570665,nssv2570752,nssv2570732,nssv2570709,nssv2570736,nssv2570708,nssv2570706,nssv2570670,nssv2570668,nssv2570734,nssv2570720,nssv2570726,nssv2570674,nssv2570723,nssv2570666,nssv2570730,nssv2570702,nssv2570719,nssv2570733,nssv2570699,nssv2570716,nssv2570710,nssv2570695,nssv2570743,nssv2570675,nssv2570663,nssv2570703,nssv2570729,nssv2570731,nssv2570737,nssv2570742,nssv2570671,nssv2570727,nssv2570713 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2677728 1 21496460 21501564 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6320059 M 1151 0 1 "" HG00174 nsv527108 1 21496799 21500073 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv703488 M 2026 0 1 "" nsv834391 1 21523440 21723989 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443951,nssv1443918,nssv1443929,nssv1443940,nssv1443963 M 95 0 5 "" esv1457635 1 21527046 21527046 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3639911 M 2 1 0 "" HuRef nsv517096 1 21537198 21670355 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv682220,nssv676837,nssv653597,nssv699191,nssv667278,nssv661510,nssv705217,nssv658962,nssv678892,nssv671036,nssv674071,nssv695226,nssv652854,nssv678465,nssv657650,nssv682311,nssv679211,nssv683155,nssv674624,nssv667702,nssv651804 M 2026 0 21 "" esv2745075 1 21544547 21546988 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6839980 M 96 0 1 "" SSM084 nsv460740 1 21563013 21572998 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537258 M 1557 0 1 "" NINDS_181 nsv545736 1 21563013 21572998 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173793 M 17421 0 1 "" NINDS_181 nsv477018 1 21566113 21566113 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020352 M 9 1 0 "" NA12878 esv2672081 1 21567822 21569943 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6529152 M 1151 0 1 "" HG00566 nsv508359 1 21578381 21654198 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622758 M 4 0 1 "" NA18994 nsv509002 1 21578381 21654198 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619779 M 4 1 0 "" NA10860 nsv470704 1 21590741 21611881 CNV gain Jakobsson_et_al_2008 18288195 SNP array nssv547717 M 443 1 0 "" HGDP00599 nsv954902 1 21599708 21654507 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003151 M 1 0 1 "" BILGI_BIOE esv1002267 1 21608822 21618373 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564498 M 3 0 1 "" HuRef nsv475097 1 21629104 21629104 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019566 M 9 1 0 "" NA19240 nsv460751 1 21632043 21662129 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537263 M 1557 0 1 "" 1780854065_A nsv545737 1 21632043 21662129 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173794 M 17421 0 1 "" 1780854065_A nsv5854 1 21676656 21711616 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3954 M 9 1 0 "" NA12878 nsv5965 1 21714465 21744989 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6413 M 9 1 0 "" NA12156 nsv508470 1 21716172 21804616 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622759 M 4 0 1 "" NA18994 esv2678062 1 21760297 21760745 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5504319 M 1151 0 1 "" NA19311 esv2667441 1 21786593 21794877 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5484073 M 1151 0 1 "" NA19625 esv2660344 1 21790929 21795470 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6295021,essv5791389,essv6196403 M 1151 0 3 "" NA19102,NA19385,NA19439 nsv545738 1 21799836 21831870 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711289 M 17421 0 1 "" nsv515659 1 21799836 21938800 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv687314,nssv704109,nssv664272,nssv669785,nssv705759,nssv695098,nssv663807,nssv669540,nssv705427 M 2026 0 9 "" nsv9546 1 21802085 21811478 CNV gain Perry_et_al_2008 18304495 Oligo aCGH nssv17753 M 31 1 0 "" NA18972 nsv509013 1 21804616 21975108 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv621086 M 4 1 0 "" NA15510 esv33753 1 21805451 21810851 CNV loss de_Smith_et_al_2007 17666407 Oligo aCGH essv93649 M 51 0 1 "" 21972 nsv834402 1 21808739 21996629 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1443974,nssv1443985,nssv1443996 M 95 0 3 "" esv33407 1 21812605 21812725 CNV gain de_Smith_et_al_2007 17666407 Oligo aCGH essv97131,essv99600,essv95073,essv97064,essv97380,essv94051,essv95849,essv99343,essv94942,essv94306,essv100572 M 51 11 0 "" 21721,21802,21808,21817,21879,21911,22075,22217,22231,22275,22298 nsv460762 1 21815490 21858059 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537273 M 1557 0 1 "" NINDS_70 dgv180n54 1 21815490 21864440 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545739,nsv545740 M 17421 0 2 "" NINDS_70 nsv469549 1 21815572 22020010 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1675868,nssv1675099,nssv1674276 M 265 0 3 "" esv2745086 1 21817998 21818224 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6871722,essv6829007,essv6766552,essv6847032,essv6821190,essv6801622,essv6776943,essv6689268,essv6967936,essv6668963,essv6780879,essv6686157,essv6880421,essv6843892,essv6832605,essv6972355,essv6675207,essv6836194,essv6941791,essv6810341,essv6703866,essv6859199,essv6669310,essv6793296,essv6902544,essv6696994,essv6816776,essv6722012,essv6921734,essv6718168,essv6889012,essv6937688,essv6950566,essv6679179,essv6804407,essv6797455,essv6682836,essv6863966,essv6898616,essv6707273,essv6725851,essv6885985,essv6883258,essv6892323,essv6895851,essv6954755,essv6868718,essv6729629,essv6876932,essv6961568,essv6925697,essv6824986,essv6929061,essv6710592,essv6916773,essv6853248,essv6692775,essv6816592,essv6784996,essv6807380,essv6699596,essv6877669,essv6789159,essv6946505 M 96 0 64 "" SSM003,SSM005,SSM010,SSM012,SSM013,SSM018,SSM019,SSM020,SSM022,SSM023,SSM024,SSM025,SSM026,SSM027,SSM028,SSM029,SSM031,SSM032,SSM033,SSM034,SSM035,SSM036,SSM037,SSM038,SSM039,SSM040,SSM041,SSM042,SSM044,SSM045,SSM046,SSM047,SSM064,SSM067,SSM068,SSM069,SSM070,SSM071,SSM072,SSM073,SSM074,SSM075,SSM076,SSM078,SSM079,SSM080,SSM081,SSM082,SSM083,SSM085,SSM086,SSM087,SSM088,SSM089,SSM090,SSM091,SSM093,SSM094,SSM095,SSM096,SSM097,SSM098,SSM099,SSM100 nsv954987 1 21818105 21818197 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000454 M 1 0 1 "" BILGI_BIOE esv2664487 1 21818127 21818263 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6593140,essv6187772,essv6373184,essv5926157,essv6559122,essv5447344,essv6392558,essv5866166,essv6431938,essv5812876,essv6583668,essv6070942,essv6384583,essv6288270,essv6524274,essv5758414,essv6568991,essv5742428,essv6382854,essv5742433,essv6562556,essv6163628,essv6582790,essv6336842,essv6450043,essv6346196,essv6385838,essv6157633,essv6516735,essv5685700,essv6375682,essv6094797,essv6532326,essv5851199,essv6375748,essv6076284,essv6382450,essv5531112,essv6587349,essv6102078,essv6587821,essv6063273,essv6475674,essv6151997,essv6544245,essv6091728,essv6413396,essv5862862,essv6497044,essv5846205,essv6580642,essv5688874,essv6547190,essv5987368,essv6380043,essv6182224,essv6569200,essv5858728,essv6569207,essv6295787,essv6576428,essv5818318,essv6493029,essv5750169,essv6471879,essv5986375,essv6596931,essv6327908,essv6500637,essv6019442,essv6503183,essv5709665,essv6443639,essv6071679,essv6540652,essv5777678,essv6467664,essv5504001,essv6416184,essv5749863,essv6530458,essv5451542,essv6570590,essv5925758,essv6514968,essv5497098,essv6438738,essv5747739,essv6596088,essv6095728,essv6488245,essv5951996,essv6415318,essv5760628,essv6595397,essv5688133,essv6460904,essv6297209,essv6480583,essv5521110,essv6428412,essv5835985,essv6549287,essv5767492,essv6528663,essv5406138,essv6409497,essv5723708,essv6427698,essv6178109,essv6248667,essv6197518,essv6098904,essv6288777,essv5998740,essv5780001,essv5703713,essv5704739,essv5775589,essv6306721,essv6040105,essv6211866,essv5746286,essv5444447,essv6316318,essv5787777,essv5996612,essv5515161,essv6297264,essv6328312,essv5801820,essv6061678,essv5458541,essv5812534,essv5824865,essv5834489,essv5705735,essv5785611,essv5711944,essv6251048,essv6289010,essv5868066,essv5421452,essv6256492,essv6357064,essv5783186,essv5539606,essv5735588,essv6121538,essv6333877,essv6211088,essv5607056,essv6106954,essv5509074,essv6056170,essv5667831,essv6173365,essv5883391,essv5573001,essv5529705,essv6167739,essv6227723,essv5870454,essv6021259,essv5552690,essv5753746,essv6124286,essv5521912,essv5606801,essv5541664,essv5889312,essv5420760,essv5637597,essv5652469,essv6166929,essv6302661,essv6127139,essv5884391,essv6139268,essv6197026,essv6179935,essv6196676,essv5557685,essv6350220,essv6182884,essv5950482,essv5887577,essv5490276,essv5584999,essv5522103,essv6149947,essv5552132,essv6033036,essv6212721,essv5596129,essv6037767,essv6218807,essv6295984,essv6002941,essv6258070,essv5530904,essv5581896,essv5599191,essv5539425,essv6094538,essv5893040,essv6013591,essv6248398,essv6308299,essv5417191,essv6103325,essv6050969,essv5765305,essv5890406,essv6045705,essv5476312,essv5659892,essv5946087,essv5865727,essv6057458,essv5537636,essv5867948,essv5577251,essv5922526,essv6068524,essv6112138,essv5484559,essv5496262,essv6276302,essv6114158,essv5485444,essv6110824,essv5413446,essv5436720,essv6310524,essv5481177,essv5442825,essv5609052,essv6012939,essv6055969,essv5916010,essv5901197,essv5626652,essv5587297,essv5429884,essv6308569,essv5847292,essv5934340,essv6333154,essv6118955,essv5958339,essv6081596,essv5454011,essv6080981,essv5453306,essv6118787,essv6238759,essv5566179,essv6079480,essv6284746,essv6349296,essv6073616,essv6183028,essv5917845,essv5467344,essv5874233,essv5857805 M 1151 0 267 "" HG00106,HG00108,HG00111,HG00114,HG00125,HG00136,HG00137,HG00138,HG00139,HG00140,HG00154,HG00185,HG00186,HG00187,HG00232,HG00237,HG00239,HG00246,HG00249,HG00250,HG00251,HG00252,HG00253,HG00254,HG00256,HG00257,HG00259,HG00260,HG00261,HG00263,HG00268,HG00271,HG00272,HG00273,HG00275,HG00276,HG00277,HG00278,HG00280,HG00281,HG00282,HG00284,HG00285,HG00309,HG00310,HG00313,HG00315,HG00318,HG00319,HG00320,HG00321,HG00323,HG00324,HG00325,HG00326,HG00327,HG00328,HG00330,HG00331,HG00334,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00344,HG00345,HG00346,HG00369,HG00372,HG00373,HG00375,HG00404,HG00418,HG00419,HG00421,HG00422,HG00427,HG00428,HG00436,HG00437,HG00442,HG00443,HG00448,HG00449,HG00463,HG00464,HG00472,HG00473,HG00475,HG00476,HG00478,HG00479,HG00500,HG00501,HG00512,HG00513,HG00524,HG00525,HG00530,HG00531,HG00533,HG00534,HG00536,HG00537,HG00542,HG00543,HG00556,HG00557,HG00580,HG00581,HG00583,HG00584,HG00589,HG00590,HG00607,HG00608,HG00613,HG00614,HG00619,HG00620,HG00629,HG00635,HG00650,HG00651,HG00653,HG00654,HG00656,HG00657,HG00662,HG00663,HG00671,HG00672,HG00683,HG00684,HG00689,HG00690,HG00692,HG00693,HG00698,HG00699,HG00701,HG00702,HG00704,HG00705,HG00707,HG00708,HG01048,HG01051,HG01052,HG01055,HG01060,HG01061,HG01066,HG01069,HG01070,HG01072,HG01073,HG01079,HG01080,HG01082,HG01083,HG01101,HG01107,HG01108,HG01125,HG01133,HG01136,HG01171,HG01173,HG01174,HG01183,HG01187,HG01188,HG01334,HG01350,HG01351,HG01353,HG01356,HG01365,HG01366,HG01378,HG01383,HG01389,HG01390,HG01437,HG01440,HG01441,HG01488,HG01492,NA11918,NA18530,NA18532,NA18534,NA18536,NA18543,NA18544,NA18546,NA18549,NA18550,NA18557,NA18559,NA18561,NA18562,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18582,NA18595,NA18597,NA18602,NA18603,NA18605,NA18606,NA18610,NA18611,NA18612,NA18613,NA18620,NA18621,NA18622,NA18623,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18638,NA18923,NA19009,NA19083,NA19087,NA19138,NA19360,NA19371,NA19372,NA19374,NA19376,NA19379,NA19380,NA19381,NA19382,NA19383,NA19384,NA19385,NA19390,NA19391,NA19394,NA19395,NA19396,NA19397,NA19398,NA19399,NA19401,NA19403,NA19404,NA19428,NA19457,NA20507,NA20513,NA20768 esv1196174 1 21818155 21818290 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3606269 M 2 0 1 "" HuRef nsv470706 1 21820584 22001785 CNV loss Jakobsson_et_al_2008 18288195 SNP array nssv547718,nssv547719 M 443 0 2 "" HGDP00546,HGDP00550 nsv545741 1 21823442 21839408 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711291 M 17421 1 0 "" nsv460784 1 21858059 21889786 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537294 M 1557 0 1 "" HGDP00857 nsv545742 1 21858059 21889786 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173796 M 17421 0 1 "" HGDP00857 esv1003020 1 21864040 21885841 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564134 M 3 0 1 "" HuRef nsv954903 1 21868108 21938307 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3003152 M 1 0 1 "" BILGI_BIOE nsv545743 1 21872682 21880449 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711292 M 17421 0 1 "" esv2660403 1 21889528 21889752 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6440494,essv6146084,essv6386397,essv6083961,essv6232903,essv6166630 M 1151 0 6 "" NA18517,NA18907,NA18912,NA19099,NA19382,NA19703 esv2758927 1 21896028 22086364 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2757727 M 270 0 1 "" NA12057 nsv945815 1 21907079 21910012 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764149,nssv1764123,nssv1764167,nssv1764139,nssv1764208,nssv1764200,nssv1764159,nssv1764124,nssv1764143,nssv1764199,nssv1764158,nssv1764133,nssv1764211,nssv1764206,nssv1764144,nssv1764138,nssv1764161,nssv1764207,nssv1764179,nssv1764201,nssv1764180,nssv1764137,nssv1764182,nssv1764135,nssv1764195,nssv1764136,nssv1764171,nssv1764134,nssv1764141,nssv1764126,nssv1764163,nssv1764198,nssv1764186,nssv1764129,nssv1764166,nssv1764131,nssv1764162,nssv1764203,nssv1764209,nssv1764204,nssv1764181,nssv1764122,nssv1764197,nssv1764128,nssv1764187,nssv1764132,nssv1764147,nssv1764125,nssv1764183,nssv1764202,nssv1764165,nssv1764127,nssv1764205,nssv1764130,nssv1764194,nssv1764140,nssv1764170,nssv1764185,nssv1764193,nssv1764169,nssv1764174,nssv1764196,nssv1764152,nssv1764184,nssv1764145,nssv1764191,nssv1764155,nssv1764173,nssv1764177,nssv1764213,nssv1764150,nssv1764151,nssv1764217,nssv1764164,nssv1764214,nssv1764148,nssv1764189,nssv1764210,nssv1764212,nssv1764175,nssv1764188,nssv1764216,nssv1764156,nssv1764157,nssv1764154,nssv1764146,nssv1764153,nssv1764160,nssv1764215,nssv1764121,nssv1764178,nssv1764190,nssv1764168,nssv1764142,nssv1764172,nssv1764192,nssv1764176 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv834413 1 21908720 22093681 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444007,nssv1444018,nssv1444029,nssv1444040 M 95 0 4 "" nsv460795 1 21923096 21958002 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537305 M 1557 0 1 "" NINDS_74 nsv545744 1 21923096 21958002 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173797 M 17421 0 1 "" NINDS_74 esv2745097 1 21959526 21960072 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829008,essv6847033,essv6892324,essv6689269,essv6780880,essv6668964,essv6972356,essv6843893,essv6941792,essv6902545,essv6703867,essv6910056,essv6921735,essv6937689,essv6950567,essv6722013,essv6917442,essv6954756,essv6824988,essv6769527,essv6929062,essv6853249,essv6710593,essv6692777,essv6876943,essv6916784,essv6946506,essv6961569 M 96 0 28 "" SSM003,SSM012,SSM013,SSM015,SSM017,SSM018,SSM020,SSM022,SSM023,SSM024,SSM025,SSM026,SSM027,SSM029,SSM031,SSM036,SSM037,SSM040,SSM042,SSM045,SSM065,SSM068,SSM080,SSM081,SSM085,SSM086,SSM087,SSM098 esv2745108 1 21959827 21960003 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829008,essv6972356,essv6954756,essv6853249,essv6961569 M 96 0 5 "" SSM026,SSM027,SSM029,SSM081,SSM087 esv1468707 1 21959913 21959963 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3697282 M 2 0 1 "" HuRef nsv945816 1 21966456 22010223 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764304,nssv1764248,nssv1764230,nssv1764257,nssv1764296,nssv1764239,nssv1764229,nssv1764289,nssv1764303,nssv1764244,nssv1764235,nssv1764277,nssv1764301,nssv1764279,nssv1764220,nssv1764292,nssv1764237,nssv1764287,nssv1764297,nssv1764265,nssv1764221,nssv1764241,nssv1764233,nssv1764288,nssv1764223,nssv1764276,nssv1764231,nssv1764283,nssv1764295,nssv1764243,nssv1764228,nssv1764218,nssv1764219,nssv1764285,nssv1764298,nssv1764305,nssv1764225,nssv1764258,nssv1764234,nssv1764290,nssv1764226,nssv1764260,nssv1764300,nssv1764307,nssv1764299,nssv1764254,nssv1764222,nssv1764269,nssv1764224,nssv1764309,nssv1764227,nssv1764278,nssv1764236,nssv1764255,nssv1764232,nssv1764271,nssv1764282,nssv1764314,nssv1764308,nssv1764262,nssv1764266,nssv1764259,nssv1764263,nssv1764268,nssv1764246,nssv1764249,nssv1764286,nssv1764284,nssv1764267,nssv1764302,nssv1764256,nssv1764281,nssv1764252,nssv1764293,nssv1764245,nssv1764251,nssv1764306,nssv1764291,nssv1764247,nssv1764270,nssv1764250,nssv1764274,nssv1764253,nssv1764242,nssv1764238,nssv1764313,nssv1764264,nssv1764240,nssv1764310,nssv1764312,nssv1764272,nssv1764280,nssv1764311,nssv1764261,nssv1764275,nssv1764294,nssv1764273 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2745119 1 21967324 21993057 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6780881,essv6829010,essv6906102,essv6793297,essv6718169,essv6669321,essv6889013,essv6917443,essv6954757,essv6883259,essv6868719,essv6733490,essv6824989,essv6692778 M 96 0 14 "" SSM005,SSM014,SSM017,SSM026,SSM037,SSM044,SSM049,SSM068,SSM071,SSM080,SSM081,SSM090,SSM095,SSM097 esv24116 1 21967392 22015846 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9848,esv12969 M 40 0 3 "" NA18861,NA18907,NA19257 nsv436921 1 21973680 21991476 CNV insertion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465918 M 2 1 0 "" NA18505 esv2672264 1 21977171 22001806 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6205107,essv5760176,essv5960075 M 1151 0 3 "" HG00254,HG00360,HG01137 dgv11e201 1 21980562 22005805 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2745130,esv2741303,esv2741534,esv2741931 M 96 0 83 "" SSM002,SSM004,SSM006,SSM007,SSM008,SSM009,SSM011,SSM012,SSM013,SSM014,SSM015,SSM017,SSM018,SSM019,SSM020,SSM021,SSM022,SSM023,SSM024,SSM025,SSM026,SSM028,SSM029,SSM031,SSM032,SSM033,SSM035,SSM036,SSM037,SSM038,SSM039,SSM040,SSM041,SSM042,SSM043,SSM044,SSM045,SSM046,SSM047,SSM049,SSM050,SSM053,SSM055,SSM056,SSM057,SSM058,SSM061,SSM062,SSM063,SSM064,SSM065,SSM067,SSM068,SSM069,SSM070,SSM071,SSM072,SSM073,SSM074,SSM075,SSM076,SSM077,SSM078,SSM079,SSM080,SSM082,SSM083,SSM084,SSM085,SSM086,SSM087,SSM088,SSM089,SSM090,SSM091,SSM092,SSM093,SSM094,SSM095,SSM097,SSM098,SSM099,SSM100 esv7729 1 21981122 22005938 CNV loss Ahn_et_al_2009 19470904 Sequencing essv30170 M 1 0 0 "" nsv9657 1 21983033 22016838 CNV loss Perry_et_al_2008 18304495 Oligo aCGH nssv12446,nssv18083 M 31 0 2 "" NA18972,NA19007 esv2760299 1 21983381 22011632 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7008633,essv7008299,essv7008410,essv7008522,essv7008077,essv7008188 M 1109 0 6 "" SW_0086,SW_0148,SW_0285,SW_0883,SW_1031,SW_1125 esv2764236 1 21983381 22031772 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005186,essv7005202,essv7005185,essv7005184,essv7005183,essv7005187,essv7005194,essv7005191,essv7005193,essv7005192,essv7005200,essv7005196,essv7005195,essv7005199,essv7005197,essv7005198,essv7005203,essv7005204 M 1109 2 16 "" RW_0020,RW_0028,RW_0071,RW_0084,RW_0088,RW_0129,RW_0147,RW_0148,RW_0180,RW_0197,RW_0331,RW_0505,RW_0558,RW_0575,RW_0577,RW_0605,RW_0621,RW_0666 dgv27n67 1 21989565 22017611 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv821965,nsv821954 M 31 0 2 "" NA18570,NA18972 nsv441686 1 21994018 22010750 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1656606,nssv1656608,nssv1656617,nssv1656620,nssv1656611,nssv1656610,nssv1656613,nssv1656600,nssv1656605,nssv1656602,nssv1656601,nssv1656618,nssv1656621,nssv1656609,nssv1656607,nssv1656619,nssv1656603,nssv1656615,nssv1656604,nssv1656614,nssv1656612,nssv1656616 M 270 0 22 "" NA12057,NA18522,NA18529,NA18545,NA18570,NA18861,NA18863,NA18948,NA18949,NA18970,NA18972,NA18981,NA18991,NA18994,NA19003,NA19005,NA19007,NA19012,NA19153,NA19154,NA19171,NA19206 esv2422105 1 21994022 22004046 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5048896,essv5117747,essv5097180,essv5040804,essv5155528,essv5099755,essv5099187,essv5160488,essv5144788,essv5025821,essv5139034,essv5005963,essv5090968,essv5130100,essv5007855,essv5079332,essv5120929,essv5048433,essv5101041,essv5122800,essv5004304,essv5012703,essv5069649,essv5152666,essv5060991,essv5089636,essv5137057,essv5140524,essv5049931,essv5131129,essv5079181,essv5122038,essv5052234,essv5031926,essv5068701,essv5126066,essv5009703,essv5026382,essv5150276,essv5029182,essv5098002,essv5052611,essv5160782,essv5093683,essv5107178,essv5127796,essv5039091,essv5062103,essv5066006,essv5086958,essv5151805,essv5089331,essv5012250,essv5057648,essv5073331,essv5051602,essv5094720,essv5122426,essv5069364,essv5021959,essv5087547,essv5039080,essv5013711,essv5092401,essv5136010,essv5082060,essv5112361,essv5013849,essv5135997,essv5027369,essv5127647,essv5047107,essv5118566,essv5153959,essv5013797,essv5079757,essv5109676,essv5114201,essv5014076,essv5004960,essv5048628,essv5092266,essv5051720,essv5116678,essv5047066,essv5072556,essv5035309,essv5057717,essv5010298,essv5087741,essv5040269,essv5139157,essv5010859,essv5067557,essv5048403,essv5082807,essv5008724,essv5030225,essv5156755,essv5060599,essv5092467,essv5098330,essv5160939,essv5106182 M 1184 0 104 "" NA06986,NA10852,NA12057,NA17970,NA17976,NA17979,NA17998,NA18108,NA18109,NA18135,NA18146,NA18147,NA18161,NA18498,NA18529,NA18545,NA18570,NA18615,NA18616,NA18617,NA18628,NA18645,NA18647,NA18861,NA18863,NA18910,NA18911,NA18923,NA18925,NA18948,NA18949,NA18970,NA18972,NA18977,NA18979,NA18981,NA18991,NA18994,NA19005,NA19007,NA19070,NA19085,NA19086,NA19153,NA19154,NA19171,NA19184,NA19186,NA19248,NA19249,NA19257,NA19258,NA19313,NA19315,NA19317,NA19319,NA19334,NA19372,NA19396,NA19397,NA19440,NA19445,NA19446,NA19452,NA19457,NA19462,NA19467,NA19473,NA19750,NA19834,NA20126,NA20128,NA20282,NA20284,NA20333,NA20334,NA20335,NA20336,NA20540,NA20544,NA20774,NA20806,NA20818,NA20891,NA20900,NA20909,NA20910,NA21107,NA21295,NA21333,NA21378,NA21390,NA21424,NA21473,NA21520,NA21597,NA21599,NA21601,NA21613,NA21614,NA21717,NA21733,NA21739,NA21776 nsv528664 1 22001786 22062834 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705302 M 2026 1 0 "" nsv545745 1 22018600 22063579 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711293 M 17421 0 1 "" nsv954904 1 22053808 22107507 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv3003153 M 1 1 0 "" BILGI_BIOE nsv545746 1 22060729 22064204 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711294 M 17421 0 1 "" nsv945817 1 22078110 22078778 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763895,nssv1763905,nssv1763829,nssv1763875,nssv1763897,nssv1763896,nssv1764327,nssv1763871,nssv1763892,nssv1763863,nssv1764318,nssv1763866,nssv1763898,nssv1763851,nssv1764330,nssv1763847,nssv1764319,nssv1763850,nssv1764320,nssv1763885,nssv1763889,nssv1763877,nssv1763894,nssv1763902,nssv1764328,nssv1763855,nssv1764323,nssv1763872,nssv1764329,nssv1763857,nssv1763890,nssv1763844,nssv1764322,nssv1763849,nssv1764316,nssv1763904,nssv1764317,nssv1763901,nssv1763893,nssv1763884,nssv1764325,nssv1763848,nssv1764326,nssv1763876,nssv1763831,nssv1763837,nssv1763830,nssv1763859,nssv1763891,nssv1763842,nssv1764324,nssv1763832,nssv1764321,nssv1763835,nssv1763828,nssv1763886,nssv1763900,nssv1763834,nssv1763878,nssv1763838,nssv1763879,nssv1763853,nssv1763852,nssv1763854,nssv1764315,nssv1763865,nssv1763908,nssv1763882,nssv1763862,nssv1763846,nssv1763860,nssv1763861,nssv1763888,nssv1763858,nssv1763903,nssv1763870,nssv1763840,nssv1763899,nssv1763883,nssv1763864,nssv1763841,nssv1763880,nssv1763856,nssv1763833,nssv1763836,nssv1763867,nssv1763839,nssv1763907,nssv1763881,nssv1763874,nssv1763868,nssv1763869,nssv1763845,nssv1763873,nssv1763843,nssv1763887,nssv1763906 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945818 1 22086278 22087390 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1763987,nssv1763985,nssv1763992,nssv1763931,nssv1763912,nssv1763960,nssv1763921,nssv1763961,nssv1763994,nssv1763940,nssv1763926,nssv1763970,nssv1763925,nssv1764001,nssv1763989,nssv1763937,nssv1763914,nssv1763968,nssv1763923,nssv1763979,nssv1763911,nssv1763973,nssv1763917,nssv1763984,nssv1763919,nssv1763974,nssv1763913,nssv1763966,nssv1763922,nssv1763946,nssv1763995,nssv1763942,nssv1763986,nssv1763997,nssv1763910,nssv1763936,nssv1763991,nssv1763954,nssv1763916,nssv1763972,nssv1763920,nssv1763963,nssv1763927,nssv1763998,nssv1763990,nssv1764003,nssv1763928,nssv1764004,nssv1763915,nssv1763969,nssv1763918,nssv1763952,nssv1763988,nssv1763959,nssv1763924,nssv1763965,nssv1763944,nssv1763981,nssv1763948,nssv1763938,nssv1763971,nssv1763941,nssv1763934,nssv1763945,nssv1764002,nssv1763909,nssv1763982,nssv1763929,nssv1763950,nssv1763977,nssv1763993,nssv1763956,nssv1763980,nssv1763932,nssv1763976,nssv1763978,nssv1763955,nssv1763949,nssv1763947,nssv1763996,nssv1763935,nssv1763951,nssv1763930,nssv1763939,nssv1763983,nssv1763943,nssv1763964,nssv1763967,nssv1763933,nssv1763957,nssv1763999,nssv1764000,nssv1763962,nssv1764005,nssv1763953,nssv1763975,nssv1763958 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv6076 1 22089806 22123911 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2871 M 9 1 0 "" NA18555 nsv945819 1 22091083 22092793 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764022,nssv1764100,nssv1764011,nssv1764044,nssv1764084,nssv1764057,nssv1764018,nssv1764038,nssv1764091,nssv1764074,nssv1764009,nssv1764065,nssv1764008,nssv1764067,nssv1764023,nssv1764072,nssv1764092,nssv1764050,nssv1764021,nssv1764059,nssv1764089,nssv1764055,nssv1764012,nssv1764051,nssv1764019,nssv1764039,nssv1764086,nssv1764054,nssv1764083,nssv1764069,nssv1764016,nssv1764052,nssv1764007,nssv1764079,nssv1764013,nssv1764066,nssv1764088,nssv1764034,nssv1764020,nssv1764099,nssv1764010,nssv1764027,nssv1764017,nssv1764073,nssv1764087,nssv1764081,nssv1764085,nssv1764063,nssv1764014,nssv1764058,nssv1764015,nssv1764030,nssv1764024,nssv1764040,nssv1764025,nssv1764037,nssv1764060,nssv1764043,nssv1764049,nssv1764035,nssv1764082,nssv1764077,nssv1764006,nssv1764062,nssv1764097,nssv1764078,nssv1764033,nssv1764041,nssv1764102,nssv1764098,nssv1764045,nssv1764042,nssv1764094,nssv1764032,nssv1764026,nssv1764068,nssv1764075,nssv1764096,nssv1764101,nssv1764076,nssv1764056,nssv1764029,nssv1764080,nssv1764061,nssv1764070,nssv1764053,nssv1764031,nssv1764095,nssv1764036,nssv1764047,nssv1764090,nssv1764071,nssv1764046,nssv1764028,nssv1764093,nssv1764064,nssv1764048 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv460806 1 22125352 22186354 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537310 M 1557 0 1 "" 1780862415_A nsv545747 1 22125352 22186354 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173798 M 17421 0 1 "" 1780862415_A nsv950284 1 22142808 22143707 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997094 M 1 0 1 "" BILGI_BIOE esv2762135 1 22161007 22168351 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005205 M 1109 0 1 "" RW_0118 esv2745142 1 22162645 22162975 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6836196 M 96 0 1 "" SSM083 nsv517086 1 22173037 22186354 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv664021,nssv665257,nssv653762,nssv666144,nssv671692,nssv661058,nssv677352,nssv676101,nssv679575,nssv663458,nssv653181,nssv684635,nssv671842,nssv656347,nssv683851,nssv682790,nssv682668,nssv669739,nssv687280,nssv663876,nssv664643 M 2026 0 21 "" esv2660559 1 22173265 22182811 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6527379,essv5846146,essv6523562,essv5680234,essv6576953,essv6101350,essv6041697,essv6095506,essv5953832 M 1151 0 9 "" NA18868,NA19107,NA19247,NA19379,NA19438,NA19451,NA19466,NA19713,NA20341 esv2421859 1 22173735 22182758 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5106782,essv5142667,essv5007542,essv5117300,essv5046500,essv5143680,essv5066431,essv5119150,essv5095704,essv5054217,essv5081713,essv5063248,essv5016642,essv5025384,essv5114057,essv5155133,essv5026109,essv5060034,essv5054726,essv5095750,essv5102934,essv5009562,essv5139059,essv5138053,essv5062450,essv5023611,essv5006220,essv5147501,essv5043047,essv5112577 M 1184 0 30 "" NA18497,NA18855,NA18857,NA18868,NA18869,NA18933,NA18935,NA19107,NA19109,NA19113,NA19122,NA19247,NA19249,NA19379,NA19438,NA19451,NA19466,NA19713,NA19983,NA20336,NA20337,NA20341,NA20342,NA20348,NA21360,NA21361,NA21400,NA21401,NA21587,NA21650 esv2764193 1 22175223 22182713 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005229,essv7005214,essv7005228,essv7005213,essv7005206,essv7005209,essv7005208,essv7005207,essv7005211,essv7005210,essv7005215,essv7005221,essv7005217,essv7005227,essv7005216,essv7005220,essv7005218,essv7005219,essv7005226,essv7005222,essv7005225,essv7005224 M 1109 0 22 "" RW_0001,RW_0069,RW_0078,RW_0093,RW_0107,RW_0114,RW_0120,RW_0145,RW_0152,RW_0200,RW_0228,RW_0231,RW_0258,RW_0266,RW_0323,RW_0527,RW_0559,RW_0587,RW_0601,RW_0616,RW_0653,RW_0665 esv2585230 1 22199225 22200661 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5282711 M 1 0 1 "" NA18507 nsv522370 1 22229500 22264963 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv695150 M 2026 0 1 "" nsv516575 1 22262500 22271564 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv669268,nssv674738 M 2026 0 2 "" nsv522775 1 22273580 22273674 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv698416 M 2026 0 1 "" nsv159512 1 22273587 22282170 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178090 M 24 "" nsv528939 1 22273674 22281064 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705630 M 2026 0 1 "" nsv945820 1 22320773 22324126 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765106,nssv1765123,nssv1765033,nssv1765052,nssv1765037,nssv1765068,nssv1765043,nssv1765055,nssv1765112,nssv1765077,nssv1765041,nssv1765051,nssv1764106,nssv1765067,nssv1765108,nssv1765098,nssv1765109,nssv1765054,nssv1765045,nssv1765086,nssv1765044,nssv1765103,nssv1764104,nssv1765116,nssv1765110,nssv1765062,nssv1765105,nssv1765101,nssv1764105,nssv1765066,nssv1765042,nssv1765097,nssv1765107,nssv1765099,nssv1765035,nssv1765119,nssv1765040,nssv1765082,nssv1765046,nssv1765050,nssv1765104,nssv1765075,nssv1765034,nssv1765118,nssv1764107,nssv1765073,nssv1765038,nssv1765063,nssv1765032,nssv1765120,nssv1765113,nssv1765088,nssv1765039,nssv1765071,nssv1765036,nssv1765090,nssv1765057,nssv1765089,nssv1765059,nssv1765094,nssv1765093,nssv1765049,nssv1765102,nssv1765096,nssv1765079,nssv1765080,nssv1765114,nssv1765095,nssv1765069,nssv1765087,nssv1765121,nssv1765047,nssv1765060,nssv1765084,nssv1765092,nssv1765100,nssv1765111,nssv1765064,nssv1765091,nssv1765122,nssv1765076,nssv1764103,nssv1765058,nssv1765078,nssv1765081,nssv1765056,nssv1765061,nssv1765053,nssv1765072,nssv1765074,nssv1765117,nssv1765070,nssv1765115,nssv1765083,nssv1765065,nssv1765048,nssv1765085 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2664761 1 22336557 22336987 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6441486,essv5595165,essv6514594,essv5687159,essv6513426,essv5700474,essv6400127,essv6365276,essv6490824,essv5786403,essv6467226,essv5816793,essv6467245,essv5807392,essv6538955,essv6031111,essv6390041,essv6211764,essv6478052,essv6242495,essv6575470,essv6133020,essv6546398,essv5852863,essv6498522,essv6086235,essv6515456,essv5751738,essv6566278,essv5775398,essv6372588,essv5698635,essv6403031,essv6137330,essv6444537,essv5702061,essv6571297,essv6113903,essv6373556,essv6161287,essv6451909,essv5714656,essv6432450,essv5481127,essv6497491,essv6173569,essv6388912,essv5585949,essv5714743,essv5469925,essv6261598,essv5752874,essv6215773,essv5408301,essv5748532,essv6337821,essv5983075,essv5824704,essv5733079,essv5901228,essv6216525,essv5622147,essv6247706,essv5860970,essv6215201,essv6037503,essv6307811,essv6136204,essv5584071,essv5572991,essv5990471,essv5401565,essv6012231,essv5883416,essv5645050,essv5454383,essv6086524,essv5592925,essv6138184,essv5398429,essv6038895,essv5570643,essv6275562,essv6086581,essv5870312,essv6300826,essv5953093,essv6210141,essv6098269,essv5423164,essv5997201,essv5634814,essv6339749,essv6326345,essv6362584 M 1151 0 95 "" HG00118,HG00122,HG00124,HG00127,HG00179,HG00181,HG00185,HG00246,HG00275,HG00306,HG00336,HG00338,HG00345,HG00368,HG00369,HG00404,HG00554,HG00595,HG00607,HG00650,HG00651,HG00699,HG00702,HG00704,HG00707,HG00734,HG01066,HG01101,HG01111,HG01124,HG01134,HG01251,HG01253,HG01254,HG01353,HG01378,HG01440,HG01461,HG01497,NA18908,NA18917,NA18945,NA18963,NA18988,NA19000,NA19004,NA19012,NA19072,NA19081,NA19102,NA19198,NA19312,NA19313,NA19319,NA19321,NA19324,NA19327,NA19331,NA19334,NA19355,NA19372,NA19376,NA19381,NA19395,NA19404,NA19443,NA19445,NA19446,NA19451,NA19457,NA19467,NA19474,NA19664,NA19670,NA19716,NA19731,NA19755,NA19773,NA19776,NA19780,NA19782,NA19785,NA19901,NA20126,NA20278,NA20289,NA20299,NA20332,NA20336,NA20348,NA20356,NA20528,NA20581,NA20769,NA20778 nsv520015 1 22348728 22356537 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv697178 M 2026 0 1 "" nsv159392 1 22353064 22353202 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv177970 M 24 "" nsv545748 1 22384885 22416492 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711295 M 17421 0 1 "" nsv6187 1 22389071 22409428 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3965 M 9 0 1 "" NA12878 nsv472291 1 22394333 22394333 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020184 M 9 1 0 "" NA18555 esv2745153 1 22442158 22442999 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933315,essv6666906 M 96 0 2 "" SSM021,SSM030 esv3401180 1 22455764 22455764 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8701365 M 185 1 0 "" NA12878 nsv6298 1 22506015 22551071 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8765 M 9 0 1 "" NA12156 nsv506921 1 22508056 22514056 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619226,nssv623263,nssv620646 M 4 0 0 "" NA10860,NA15510,NA18994 nsv819803 1 22529188 22529492 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418549 M 2 1 0 "" AK1 nsv509024 1 22536990 22581743 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619780 M 4 1 0 "" NA10860 nsv480045 1 22539795 22539795 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017056 M 9 0 0 "" esv2666301 1 22542180 22544540 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5771984 M 1151 0 1 "" NA19712 nsv545749 1 22551320 22625893 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711297,nssv711296 M 17421 0 2 "" nsv545750 1 22559273 22564428 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711298 M 17421 0 1 "" esv2663187 1 22559995 22561838 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6533054,essv5967653 M 1151 0 2 "" NA18853,NA18858 esv27002 1 22560032 22561770 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv17180 M 40 0 1 "" NA18858 esv26050 1 22562682 22564686 CNV gain Conrad_et_al_2009 19812545 Oligo aCGH esv13267,esv12203 M 40 3 0 "" NA06985,NA12044,NA18861 dgv181n54 1 22562710 22564576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545752,nsv545751 M 17421 0 2 "" nsv545753 1 22562979 22564162 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711301 M 17421 0 1 "" dgv182n54 1 22563356 22564473 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545757,nsv545756,nsv545755 M 17421 4 0 "" dgv183n54 1 22563356 22564576 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545758,nsv545754 M 17421 0 3 "" dgv184n54 1 22563554 22564322 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545759,nsv545760 M 17421 0 2 "" dgv185n54 1 22563949 22564630 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545761,nsv545766 M 17421 2 0 "" dgv186n54 1 22563965 22564422 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545763,nsv545762 M 17421 0 2 "" dgv187n54 1 22563965 22564649 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545765,nsv545764,nsv545767 M 17421 0 3 "" nsv545768 1 22564111 22564428 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711318 M 17421 0 1 "" dgv188n54 1 22564162 22564524 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545770,nsv545769 M 17421 3 0 "" nsv545771 1 22564162 22564576 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711322,nssv711323,nssv711324,nssv711325 M 17421 2 2 "" dgv189n54 1 22564162 22564649 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545772,nsv545773 M 17421 0 3 "" dgv63e59 1 22570430 22570543 CNV tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3302676,esv3302704 M 185 0 0 "" NA12878,NA18501,NA18502,NA18508,NA18511,NA18522,NA18870,NA18916,NA18948,NA18952,NA18956,NA18965,NA19093,NA19108,NA19129,NA19225,NA19238,NA19239,NA19240,NA19257 esv3374857 1 22570448 22570542 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8670869,essv8670872,essv8670870,essv8670871 M 185 4 0 "" NA12878,NA19238,NA19239,NA19240 esv994542 1 22574893 22580151 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565422 M 3 1 0 "" HuRef dgv64e59 1 22577572 22580170 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3437457,esv3382026 M 185 2 0 "" NA19238,NA19240 esv3577 1 22577823 22578181 CNV loss Wang_et_al_2008 18987735 Sequencing essv26018 M 1 0 1 "" YH dgv28e199 1 22577823 22579144 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2661077,esv2663353,esv2672696 M 1151 0 128 "" HG00100,HG00120,HG00141,HG00142,HG00160,HG00178,HG00190,HG00264,HG00267,HG00311,HG00320,HG00324,HG00335,HG00343,HG00366,HG00421,HG00524,HG00553,HG00578,HG00620,HG00650,HG00732,HG00740,HG01047,HG01048,HG01055,HG01097,HG01133,HG01134,HG01136,HG01171,HG01359,HG01440,HG01498,NA07051,NA11830,NA11843,NA11892,NA12058,NA12275,NA12400,NA12718,NA12777,NA18488,NA18507,NA18520,NA18522,NA18543,NA18553,NA18562,NA18564,NA18577,NA18582,NA18619,NA18873,NA18917,NA18924,NA18963,NA18982,NA18988,NA18990,NA19003,NA19004,NA19072,NA19082,NA19083,NA19084,NA19092,NA19116,NA19130,NA19189,NA19198,NA19313,NA19350,NA19393,NA19445,NA19446,NA19448,NA19455,NA19457,NA19461,NA19466,NA19471,NA19472,NA19648,NA19654,NA19658,NA19678,NA19679,NA19681,NA19682,NA19685,NA19704,NA19717,NA19728,NA19780,NA19788,NA19818,NA19835,NA19900,NA19908,NA20334,NA20506,NA20522,NA20527,NA20541,NA20542,NA20581,NA20582,NA20755,NA20757,NA20759,NA20760,NA20761,NA20766,NA20769,NA20775,NA20783,NA20787,NA20792,NA20796,NA20798,NA20799,NA20800,NA20805,NA20807,NA20809,NA20810 nsv820259 1 22577906 22578002 CNV insertion Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418885 M 2 1 0 "" AK1 esv3440698 1 22577972 22579570 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692159 M 185 1 0 "" NA19239 esv1707275 1 22577994 22577994 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3714244 M 2 1 0 "" HuRef nsv160591 1 22577995 22579092 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179169 M 24 "" esv2677455 1 22578477 22579363 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5867279,essv5677500,essv6505499,essv5708481,essv6597139,essv5544672,essv6216357,essv5446269,essv6233400,essv5433105,essv6260214,essv5706718,essv5799989,essv6435834,essv6265105,essv6322859,essv6200664,essv6539725,essv6002413,essv6035399,essv5860170,essv6029810,essv5585472,essv6451817,essv5884612 M 1151 0 25 "" HG00336,HG00380,HG01489,NA11919,NA12347,NA12413,NA12546,NA12827,NA19256,NA19376,NA19377,NA19383,NA19446,NA19448,NA19701,NA19703,NA19776,NA19834,NA19835,NA19900,NA20765,NA20772,NA20801,NA20802,NA20812 esv2745164 1 22578667 22579441 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6750612,essv6829011,essv6668967,essv6843896,essv6972358,essv6859201,essv6816787,essv6797457,essv6876976 M 96 0 9 "" SSM010,SSM012,SSM029,SSM031,SSM057,SSM072,SSM081,SSM085,SSM088 esv4502 1 22578918 22579165 CNV loss Wang_et_al_2008 18987735 Sequencing essv26943 M 1 0 1 "" YH esv2745175 1 22578969 22579081 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6668967,essv6859201,essv6972358 M 96 0 3 "" SSM029,SSM031,SSM088 esv2745186 1 22599353 22599985 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6750613,essv6801624,essv6892326,essv6843897,essv6972359,essv6910058,essv6859202,essv6885987,essv6853251,essv6748475 M 96 0 10 "" SSM008,SSM015,SSM029,SSM057,SSM073,SSM085,SSM087,SSM088,SSM096,SSM098 esv2745197 1 22599546 22599704 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6859202,essv6885987,essv6853251 M 96 0 3 "" SSM087,SSM088,SSM096 esv2745208 1 22599636 22600089 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6722015,essv6853251 M 96 0 2 "" SSM045,SSM087 esv2745219 1 22599639 22599701 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6853251 M 96 0 1 "" SSM087 esv34161 1 22599762 22817730 CNV loss Gusev_et_al_2009 18971310 SNP array essv6990600 M 270 0 0 "" nsv476854 1 22616323 22616323 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014206 M 9 1 0 "" NA12878 nsv473644 1 22646307 22646307 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016456 M 9 1 0 "" NA19129 esv2745230 1 22658415 22659218 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6839982,essv6972360,essv6967938,essv6941794,essv6961570 M 96 0 5 "" SSM023,SSM027,SSM028,SSM029,SSM084 esv2742989 1 22658841 22659564 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6933316 M 96 0 1 "" SSM021 esv2745241 1 22658902 22658988 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6961570 M 96 0 1 "" SSM027 esv2745253 1 22659154 22659488 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6880423,essv6668968 M 96 0 2 "" SSM031,SSM094 esv2745264 1 22659238 22659385 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6880423 M 96 0 1 "" SSM094 esv1510090 1 22659328 22659390 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4329170 M 2 0 1 "" HuRef dgv65e59 1 22678072 22679170 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3330989,esv3367482 M 185 2 0 "" NA19238,NA19239 esv3327416 1 22678272 22679570 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692163 M 185 1 0 "" NA19240 nsv481144 1 22714929 22714929 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019815 M 9 0 0 "" esv2538911 1 22754370 22755115 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5338263 M 1 1 0 "" NA18507 nsv512725 1 22754795 22755025 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625350 M 1 1 0 "" 1 nsv469829 1 22755529 22936917 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1676469,nssv1672672,nssv1672826,nssv1673091 M 265 0 4 "" nsv509036 1 22780139 22859498 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619781 M 4 1 0 "" NA10860 nsv476503 1 22782211 22782211 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011294 M 9 1 0 "" NA12878 esv1389294 1 22803646 22803696 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3987352 M 2 0 1 "" HuRef nsv528926 1 22862630 22880191 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv705616 M 2026 0 1 "" nsv6409 1 22898305 22930158 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1954 M 9 1 0 "" NA18555 esv2504682 1 22949970 22950899 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5188949 M 1 1 0 "" NA18507 esv1485438 1 22950454 22950454 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4125835 M 2 1 0 "" HuRef nsv819213 1 22984897 23012480 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418711 M 2 0 1 "" AK1 esv3425192 1 23045673 23045681 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863681 M 185 1 0 "" NA12005 nsv6520 1 23077876 23096553 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv5396 M 9 1 0 "" NA19129 esv2745275 1 23107591 23111023 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829012 M 96 0 1 "" SSM081 nsv819728 1 23118239 23122680 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419637 M 2 0 1 "" AK1 nsv834424 1 23132911 23276209 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444051 M 95 0 1 "" esv2657917 1 23148748 23153604 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5401802,essv6296524,essv6554828,essv6335031 M 1151 0 4 "" HG00171,HG00266,HG00284,HG00375 nsv821976 1 23168208 23169917 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1429554 M 31 1 0 "" AK14 nsv479944 1 23237277 23237277 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020457 M 9 0 0 "" nsv481230 1 23242147 23242147 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017604 M 9 0 0 "" nsv480038 1 23243029 23243029 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011032 M 9 0 0 "" nsv945824 1 23243954 23245267 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765193,nssv1765230,nssv1765181,nssv1765236,nssv1765185,nssv1765259,nssv1765190,nssv1765239,nssv1765184,nssv1765229,nssv1765252,nssv1765197,nssv1765179,nssv1765209,nssv1765257,nssv1765232,nssv1765192,nssv1765217,nssv1765256,nssv1765265,nssv1765189,nssv1765234,nssv1765258,nssv1765248,nssv1765260,nssv1765226,nssv1765178,nssv1765250,nssv1765253,nssv1765244,nssv1765254,nssv1765206,nssv1765255,nssv1765233,nssv1765191,nssv1765202,nssv1765188,nssv1765224,nssv1765177,nssv1765240,nssv1765176,nssv1765245,nssv1765182,nssv1765203,nssv1765180,nssv1765263,nssv1765194,nssv1765222,nssv1765186,nssv1765231,nssv1765187,nssv1765262,nssv1765183,nssv1765218,nssv1765261,nssv1765204,nssv1765237,nssv1765196,nssv1765270,nssv1765215,nssv1765269,nssv1765198,nssv1765242,nssv1765225,nssv1765210,nssv1765220,nssv1765205,nssv1765243,nssv1765271,nssv1765247,nssv1765238,nssv1765199,nssv1765264,nssv1765214,nssv1765241,nssv1765235,nssv1765201,nssv1765227,nssv1765207,nssv1765211,nssv1765200,nssv1765267,nssv1765221,nssv1765195,nssv1765268,nssv1765208,nssv1765228,nssv1765251,nssv1765246,nssv1765219,nssv1765223,nssv1765216,nssv1765212,nssv1765249,nssv1765266,nssv1765175,nssv1765213 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv475902 1 23244830 23244830 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011902 M 9 1 0 "" NA12878 nsv480771 1 23245483 23245483 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016100 M 9 0 0 "" nsv480819 1 23246385 23246385 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017381 M 9 0 0 "" nsv6631 1 23267401 23286280 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv3974,nssv5405,nssv964,nssv6423,nssv1966,nssv9804,nssv10760 M 9 7 0 "" NA12156,NA12878,NA18507,NA18555,NA18956,NA19129,NA19240 esv2673893 1 23268936 23269419 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6595907 M 1151 0 1 "" NA19102 esv2678093 1 23269611 23270884 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5651735,essv5575699 M 1151 0 2 "" HG00442,HG00692 nsv509047 1 23271472 23290078 CNV insertion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv623777,nssv617990,nssv621087,nssv619782 M 4 4 0 "" CHM,NA10860,NA15510,NA18994 esv1003688 1 23276643 23277771 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564590 M 3 1 0 "" HuRef esv2673750 1 23350628 23354044 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5855109 M 1151 0 1 "" NA19921 nsv525446 1 23369659 23374819 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv701574 M 2026 1 0 "" nsv521882 1 23383982 23388172 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv694653 M 2026 0 1 "" esv2745286 1 23392097 23392866 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6839983,essv6689271,essv6773445,essv6686159,essv6902547,essv6793300,essv6714253,essv6950570,essv6679182,essv6707275,essv6954759,essv6729632,essv6769529,essv6710595,essv6784999 M 96 0 15 "" SSM013,SSM025,SSM026,SSM033,SSM035,SSM036,SSM041,SSM042,SSM043,SSM047,SSM065,SSM066,SSM069,SSM071,SSM084 nsv512726 1 23392276 23392634 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625351 M 1 1 0 "" 1 esv9540 1 23392358 23392689 CNV loss Ahn_et_al_2009 19470904 Sequencing essv31981 M 1 0 0 "" esv2558689 1 23392366 23392567 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5285756 M 1 0 1 "" NA18507 esv2745297 1 23409633 23411373 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6874717,essv6789161,essv6764171,essv6950307,essv6871724,essv6718998,essv6733492,essv6710596,essv6744945 M 96 0 9 "" SSM004,SSM007,SSM042,SSM049,SSM055,SSM063,SSM070,SSM091,SSM092 esv2661255 1 23409658 23411267 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6357101,essv5805488,essv6264187,essv5702593,essv6293220,essv6199177,essv6570160,essv5790002,essv6396350,essv6038526,essv6234199,essv5806711,essv6328250,essv5850968,essv6358225,essv6008967,essv6294880,essv5744840,essv6226673,essv5518126,essv6500360,essv5810948,essv6342006,essv6030979,essv6354537,essv5544839,essv6266818,essv5480655,essv6307122,essv6059235,essv5458396,essv5575981,essv6037789,essv5561803,essv6018205,essv5881841,essv5543867,essv5491669,essv5568567,essv5586828 M 1151 0 40 "" HG00403,HG00442,HG00449,HG00478,HG00500,HG00557,HG00584,HG00593,HG00595,HG00607,HG00613,HG00614,HG00619,HG00628,HG00635,HG00657,HG00662,HG00683,HG00684,HG00699,HG00701,HG00708,NA18544,NA18546,NA18550,NA18560,NA18612,NA18631,NA18632,NA18634,NA18635,NA18637,NA18940,NA18977,NA18999,NA19012,NA19070,NA19074,NA19075,NA19082 dgv28n67 1 23409989 23411258 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv821987,nsv821998 M 31 0 7 "" AK16,AK18,AK4,NA18547,NA18582,NA18592,NA18999 esv3326511 1 23455572 23457470 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692194 M 185 1 0 "" NA19239 nsv834435 1 23472969 23651441 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444062,nssv1444074 M 95 0 2 "" nsv819574 1 23483147 23484822 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419305 M 2 1 0 "" AK1 esv3413244 1 23495222 23495222 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8823867 M 185 1 0 "" NA12878 esv3417759 1 23495244 23495244 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8638759 M 185 0 0 "" esv1790599 1 23495251 23495251 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3794850 M 2 1 0 "" HuRef esv3417141 1 23524106 23524113 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863682 M 185 1 0 "" NA12005 esv2745308 1 23531617 23532100 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6916795 M 96 0 1 "" SSM003 esv2659031 1 23540850 23548520 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5618619 M 1151 0 1 "" HG00536 nsv160295 1 23564570 23568761 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178873 M 24 "" nsv460840 1 23610771 23661871 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537340 M 1557 0 1 "" 1780862162_A nsv545774 1 23610771 23661871 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173799 M 17421 0 1 "" 1780862162_A esv275297 1 23631281 23634366 CNV loss Banerjee_et_al_2011 21479260 SNP array essv2585424 M 1250 0 1 "" esv3303493 1 23654632 23654633 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7763444,essv7764690,essv7767723,essv7768115,essv7766407,essv7768890,essv7765382,essv7767072 M 185 8 0 "" NA07347,NA11918,NA12234,NA12249,NA12287,NA12878,NA12891,NA12892 esv3309057 1 23654634 23654635 CNV mobile element insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7839894,essv7841153,essv7840539 M 185 3 0 "" NA12878,NA12891,NA12892 esv3430049 1 23654641 23654651 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8673983,essv8673984,essv8673982 M 185 3 0 "" NA12878,NA12891,NA12892 nsv160080 1 23676988 23680416 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178658 M 24 "" nsv473882 1 23704496 23704496 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018778 M 9 1 0 "" NA12156 dgv29e199 1 23764964 23773446 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2663043,esv2658633 M 1151 0 15 "" NA19350,NA19383,NA19393,NA19430,NA19431,NA19436,NA19438,NA19440,NA19443,NA19446,NA19448,NA19452,NA19468,NA19469,NA19470 esv2671952 1 23780248 23781965 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5775421 M 1151 0 1 "" NA19466 esv2665549 1 23835317 23839835 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6477099,essv5589265,essv6219908 M 1151 0 3 "" HG00448,HG00614,HG00663 esv2745319 1 23835387 23839620 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6729633 M 96 0 1 "" SSM047 esv1587089 1 23837428 23837428 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4060701 M 2 1 0 "" HuRef esv2745330 1 23845863 23846055 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829013 M 96 0 1 "" SSM081 esv2742159 1 23845863 23848612 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829014 M 96 0 1 "" SSM081 esv2745341 1 23848830 23854315 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829015 M 96 0 1 "" SSM081 esv2745352 1 23854604 23863108 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829016 M 96 0 1 "" SSM081 esv2745364 1 23859942 23865448 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829017 M 96 0 1 "" SSM081 esv2745375 1 23863309 23867883 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6829019,essv6829018 M 96 0 1 "" SSM081 esv29329 1 23873656 23874901 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv15695,esv12811 M 40 0 15 "" NA11894,NA11931,NA11993,NA12004,NA12749,NA12878,NA18505,NA18511,NA18517,NA18861,NA18907,NA18909,NA19147,NA19190,NA19225 dgv29n67 1 23873972 23874822 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822043,nsv822009,nsv822032,nsv822020 M 31 0 5 "" AK2,AK6,NA18947,NA18951,NA18972 dgv190n54 1 23874034 23874672 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545775,nsv545777,nsv545776 M 17421 0 3 "" nsv545778 1 23874269 23874672 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711333,nssv711332,nssv711334,nssv711335 M 17421 0 4 "" dgv191n54 1 23874282 23874867 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545780,nsv545779 M 17421 0 4 "" esv991485 1 23882247 23888394 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3563891 M 3 1 0 "" HuRef nsv512727 1 23883873 23884354 CNV insertion Arlt_et_al_2011 21212237 Sequencing,SNP array nssv625352 M 1 1 0 "" 1 esv1663042 1 23884346 23884346 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4228988 M 2 1 0 "" HuRef esv2672735 1 23897126 23897711 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5783832,essv6247228,essv5478506,essv6211625,essv5406869,essv5499108,essv6346688,essv6338724,essv5527943,essv6123658,essv5641765,essv5537794,essv5538620 M 1151 0 13 "" HG00418,HG00437,HG00543,HG00559,HG00596,HG00634,HG00654,HG00698,NA18599,NA18606,NA18963,NA19000,NA19083 esv2745386 1 23897128 23897670 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6946509 M 96 0 1 "" SSM024 esv3418378 1 23917425 23917435 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863683 M 185 1 0 "" NA12005 nsv6742 1 23927423 23960891 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv2882 M 9 1 0 "" NA18555 esv2676255 1 23930055 23993402 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5420473,essv5935079,essv6530819,essv5854710,essv5535735,essv5543571,essv5685776,essv5741543,essv5468498,essv5776834,essv5568989,essv6267797,essv5815793,essv6205556,essv5775587,essv5834335,essv5826734,essv5502878,essv5491374,essv6133992,essv6223000,essv6329332,essv6470712,essv5696689,essv5837996,essv5657971,essv6263821,essv5556143,essv6419179,essv5846032,essv5632388,essv5839876,essv6038427,essv5652043,essv6065453,essv5640877,essv6150791,essv6285848,essv6471479,essv6541778,essv5460111,essv5523576,essv6407576,essv5641327,essv6032725,essv5589908,essv5458279,essv6029480,essv6223248,essv5553999,essv6502255,essv6008683,essv6174404 M 1151 0 53 "" HG00553,HG00554,HG00637,HG00638,HG00640,HG00641,HG00731,HG00732,HG00734,HG00736,HG00737,HG00740,HG01047,HG01048,HG01051,HG01052,HG01055,HG01060,HG01061,HG01066,HG01067,HG01069,HG01070,HG01072,HG01073,HG01075,HG01079,HG01080,HG01082,HG01083,HG01095,HG01097,HG01098,HG01101,HG01102,HG01107,HG01108,HG01167,HG01168,HG01170,HG01171,HG01173,HG01174,HG01176,HG01182,HG01183,HG01187,HG01188,HG01190,HG01191,HG01197,HG01198,HG01204 esv2662136 1 23930055 24035602 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6527098,essv5767080,essv5517465,essv6022055,essv6050165,essv5503809 M 1151 0 6 "" HG01515,HG01516,HG01518,HG01519,HG01521,HG01522 nsv945826 1 23942157 23949216 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764949,nssv1765012,nssv1764953,nssv1764989,nssv1765024,nssv1764998,nssv1764957,nssv1764983,nssv1765025,nssv1764963,nssv1765029,nssv1764978,nssv1764946,nssv1765272,nssv1764960,nssv1764975,nssv1764959,nssv1765002,nssv1765022,nssv1764985,nssv1765028,nssv1764966,nssv1765021,nssv1764968,nssv1765274,nssv1765030,nssv1764947,nssv1764991,nssv1765023,nssv1765011,nssv1764958,nssv1765013,nssv1764961,nssv1765017,nssv1765026,nssv1765019,nssv1764956,nssv1765016,nssv1764951,nssv1764987,nssv1764948,nssv1764996,nssv1764962,nssv1765004,nssv1764950,nssv1765018,nssv1765020,nssv1765010,nssv1765273,nssv1765009,nssv1764954,nssv1765960,nssv1764955,nssv1765959,nssv1764952,nssv1764995,nssv1764988,nssv1765014,nssv1765006,nssv1764969,nssv1764984,nssv1765008,nssv1765000,nssv1765007,nssv1765003,nssv1764970,nssv1764976,nssv1764980,nssv1764964,nssv1764992,nssv1764982,nssv1765957,nssv1764973,nssv1764979,nssv1765961,nssv1765015,nssv1764997,nssv1764981,nssv1764971,nssv1765027,nssv1764972,nssv1765956,nssv1764986,nssv1764977,nssv1764990,nssv1764993,nssv1765958,nssv1765005,nssv1765031,nssv1764999,nssv1764967,nssv1764965,nssv1765963,nssv1764974,nssv1765962,nssv1764994,nssv1765001 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv950285 1 23958011 23970110 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997095 M 1 1 0 "" BILGI_BIOE nsv945827 1 23969201 23971390 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766043,nssv1765984,nssv1765966,nssv1766032,nssv1766042,nssv1766056,nssv1766047,nssv1765997,nssv1765970,nssv1765990,nssv1765982,nssv1765994,nssv1765974,nssv1766005,nssv1765973,nssv1766006,nssv1765981,nssv1766016,nssv1766045,nssv1766027,nssv1765978,nssv1766034,nssv1765969,nssv1766010,nssv1765967,nssv1765989,nssv1766049,nssv1766054,nssv1766041,nssv1766015,nssv1765983,nssv1765985,nssv1766050,nssv1766022,nssv1765979,nssv1766048,nssv1765972,nssv1766057,nssv1765968,nssv1766023,nssv1765977,nssv1766058,nssv1766044,nssv1766053,nssv1765965,nssv1765995,nssv1765971,nssv1766011,nssv1765975,nssv1766000,nssv1765980,nssv1766020,nssv1766046,nssv1766014,nssv1765976,nssv1766002,nssv1766051,nssv1766026,nssv1766007,nssv1766008,nssv1766019,nssv1766031,nssv1766029,nssv1766009,nssv1765991,nssv1766004,nssv1766028,nssv1765987,nssv1766025,nssv1766003,nssv1765986,nssv1766033,nssv1766037,nssv1766060,nssv1766030,nssv1766001,nssv1765993,nssv1766013,nssv1766036,nssv1765988,nssv1766040,nssv1766059,nssv1766012,nssv1766039,nssv1766052,nssv1766055,nssv1766017,nssv1766021,nssv1766024,nssv1765992,nssv1766018,nssv1765998,nssv1765996,nssv1766035,nssv1765999,nssv1766038,nssv1765964 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv511683 1 23992379 23995701 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626322 M 1 0 1 "" 1 esv2664644 1 23994255 24036602 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6568064,essv5925653,essv6570082,essv5805601,essv6595708,essv6338953,essv6397744,essv5700305,essv6503308,essv5823947,essv6451010,essv5741434,essv6495667,essv6210221,essv6453339,essv5754038,essv6476962,essv5512455,essv6573974,essv6297184,essv6404520,essv5606643,essv6522409,essv6194609,essv6439575,essv6135323,essv6461631,essv5789365,essv6245513,essv6064513,essv5406255,essv5897000,essv5923798,essv5499575,essv5976176,essv6113943,essv5536010,essv6127531,essv5897276,essv6014316,essv6132678,essv5964709,essv5477683,essv6344657,essv6038186,essv5940786,essv6235489,essv5557158,essv5600832,essv6058151,essv6013408,essv5586584,essv6024427 M 1151 0 53 "" HG00553,HG00554,HG00637,HG00638,HG00640,HG00641,HG00731,HG00732,HG00734,HG00736,HG00737,HG00740,HG01047,HG01048,HG01051,HG01052,HG01055,HG01060,HG01061,HG01066,HG01067,HG01069,HG01070,HG01072,HG01073,HG01075,HG01079,HG01080,HG01082,HG01083,HG01095,HG01097,HG01098,HG01101,HG01102,HG01107,HG01108,HG01167,HG01168,HG01170,HG01171,HG01173,HG01174,HG01176,HG01182,HG01183,HG01187,HG01188,HG01190,HG01191,HG01197,HG01198,HG01204 esv3393873 1 24002271 24002290 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv9593813,essv9593802 M 185 2 0 "" NA12287,NA12873 esv2745397 1 24015191 24016133 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6742150,essv6750614,essv6847035,essv6766555,essv6789162,essv6972362,essv6843909,essv6668969,essv6703869,essv6961571,essv6950571,essv6733493,essv6748487 M 96 0 13 "" SSM008,SSM011,SSM025,SSM027,SSM029,SSM031,SSM040,SSM049,SSM053,SSM057,SSM064,SSM070,SSM086 esv2745408 1 24015524 24015896 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6847035,essv6766555,essv6668969,essv6972362,essv6843909,essv6703869,essv6789162,essv6950571,essv6961571 M 96 0 9 "" SSM011,SSM025,SSM027,SSM029,SSM031,SSM040,SSM064,SSM070,SSM086 esv2745419 1 24015589 24015763 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6847035,essv6972362,essv6843909,essv6668969,essv6703869,essv6961571,essv6950571 M 96 0 7 "" SSM011,SSM025,SSM027,SSM029,SSM031,SSM040,SSM086 esv2674928 1 24040879 24041300 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5708663,essv6447787,essv6551327,essv6371620,essv5776849,essv6150592,essv6250066,essv6086473,essv6120722,essv6414442,essv5932308,essv5873139,essv5966423,essv5607650,essv6028652 M 1151 0 15 "" HG01069,HG01365,NA18501,NA18868,NA19093,NA19114,NA19190,NA19318,NA19360,NA19398,NA19430,NA19453,NA19703,NA19711,NA19985 nsv475436 1 24056892 24056892 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014221 M 9 1 0 "" NA19240 esv2609872 1 24075963 24077746 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5352209 M 1 0 1 "" NA18507 esv5851 1 24076237 24077113 CNV loss Ahn_et_al_2009 19470904 Sequencing essv28292 M 1 0 0 "" esv1968924 1 24076313 24076999 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4552184 M 1 0 1 "" NA18507 esv2745430 1 24076448 24076815 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6871725,essv6892327,essv6766556,essv6832607,essv6972363,essv6810344,essv6793301,essv6961572,essv6885988,essv6925699,essv6748498 M 96 0 11 "" SSM008,SSM019,SSM027,SSM029,SSM064,SSM071,SSM076,SSM082,SSM091,SSM096,SSM098 esv989974 1 24076497 24076813 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571507 M 3 0 1 "" HuRef esv1250620 1 24076513 24076830 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3762899 M 2 0 1 "" HuRef esv2853014 1 24076826 24077137 CNV deletion Pang_et_al_2013b 24192839 Sequencing essv7122581 M 1 0 1 "" HuRef nsv822054 1 24081850 24082481 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431798 M 31 0 1 "" AK20 nsv472633 1 24103658 24103658 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015597 M 9 1 0 "" NA18555 nsv506922 1 24148078 24154078 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv619227,nssv623264,nssv620647,nssv617526 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 nsv506923 1 24165156 24171156 OTHER sequence alteration Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv620649,nssv623265,nssv617527,nssv619228 M 4 0 0 "" CHM,NA10860,NA15510,NA18994 nsv6853 1 24165623 24199731 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv8821 M 9 1 0 "" NA12156 nsv545781 1 24190390 24196802 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711340 M 17421 0 1 "" dgv1n73 1 24193811 24197210 CNV deletion Dogan_et_al_2014 24416366 Sequencing nsv957864,nsv950291 M 1 0 1 "" BILGI_BIOE esv2745441 1 24193828 24197199 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6871726,essv6748509,essv6742151,essv6750615,essv6876987,essv6789163,essv6847036,essv6821192,essv6839984,essv6829021,essv6689272,essv6880424,essv6766557,essv6843899,essv6784743,essv6933318,essv6843920,essv6941796,essv6793302,essv6967939,essv6714255,essv6696996,essv6902548,essv6961574,essv6666907,essv6816798,essv6718171,essv6759057,essv6863968,essv6917445,essv6797458,essv6738817,essv6885989,essv6883261,essv6719009,essv6725853,essv6747792,essv6950318,essv6925700,essv6950572,essv6929065,essv6710597,essv6761868,essv6695743,essv6753506,essv6816595,essv6785000,essv6916806,essv6699600,essv6877671 M 96 0 50 "" SSM003,SSM004,SSM006,SSM007,SSM008,SSM009,SSM010,SSM011,SSM012,SSM013,SSM017,SSM019,SSM020,SSM021,SSM023,SSM025,SSM027,SSM028,SSM030,SSM036,SSM038,SSM039,SSM042,SSM043,SSM044,SSM046,SSM052,SSM053,SSM056,SSM057,SSM058,SSM061,SSM062,SSM064,SSM069,SSM070,SSM071,SSM072,SSM078,SSM079,SSM081,SSM084,SSM085,SSM086,SSM089,SSM091,SSM093,SSM094,SSM095,SSM096 esv29789 1 24193854 24197214 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv14913 M 40 0 7 "" NA07037,NA07045,NA11993,NA12004,NA12044,NA12414,NA12749 dgv30e199 1 24193857 24197196 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2666896,esv2672510 M 1151 0 248 "" HG00116,HG00117,HG00120,HG00126,HG00131,HG00138,HG00140,HG00141,HG00146,HG00159,HG00160,HG00173,HG00174,HG00178,HG00182,HG00231,HG00244,HG00245,HG00246,HG00250,HG00252,HG00267,HG00269,HG00271,HG00272,HG00276,HG00280,HG00284,HG00310,HG00323,HG00326,HG00329,HG00331,HG00357,HG00373,HG00377,HG00418,HG00419,HG00422,HG00428,HG00437,HG00442,HG00448,HG00463,HG00472,HG00473,HG00513,HG00530,HG00557,HG00559,HG00565,HG00578,HG00580,HG00581,HG00583,HG00589,HG00592,HG00595,HG00596,HG00607,HG00610,HG00611,HG00613,HG00614,HG00620,HG00625,HG00629,HG00634,HG00635,HG00651,HG00656,HG00657,HG00662,HG00671,HG00684,HG00690,HG00693,HG00702,HG00704,HG00708,HG00737,HG01048,HG01055,HG01060,HG01067,HG01075,HG01125,HG01134,HG01136,HG01197,HG01359,HG01365,HG01374,HG01384,HG01461,NA07037,NA11881,NA11893,NA11993,NA11995,NA12004,NA12044,NA12249,NA12283,NA12286,NA12399,NA12414,NA12546,NA12716,NA12748,NA12749,NA12751,NA12761,NA12775,NA12829,NA18522,NA18532,NA18542,NA18544,NA18546,NA18547,NA18550,NA18557,NA18559,NA18561,NA18562,NA18563,NA18565,NA18570,NA18571,NA18572,NA18573,NA18577,NA18579,NA18592,NA18593,NA18603,NA18605,NA18609,NA18611,NA18612,NA18614,NA18617,NA18619,NA18620,NA18623,NA18626,NA18630,NA18631,NA18632,NA18633,NA18634,NA18638,NA18856,NA18941,NA18942,NA18945,NA18951,NA18961,NA18963,NA18965,NA18973,NA18977,NA18982,NA18985,NA18988,NA19002,NA19005,NA19012,NA19055,NA19060,NA19064,NA19065,NA19066,NA19067,NA19068,NA19076,NA19079,NA19080,NA19085,NA19087,NA19116,NA19130,NA19197,NA19213,NA19311,NA19313,NA19316,NA19334,NA19360,NA19375,NA19429,NA19438,NA19449,NA19457,NA19462,NA19468,NA19648,NA19651,NA19654,NA19658,NA19660,NA19663,NA19679,NA19684,NA19716,NA19725,NA19726,NA19762,NA19773,NA19776,NA19779,NA20276,NA20278,NA20289,NA20296,NA20341,NA20342,NA20506,NA20510,NA20512,NA20517,NA20531,NA20537,NA20540,NA20542,NA20544,NA20581,NA20582,NA20585,NA20588,NA20755,NA20760,NA20765,NA20773,NA20774,NA20775,NA20778,NA20785,NA20787,NA20792,NA20799,NA20800,NA20802,NA20806,NA20810,NA20818,NA20819 dgv30n67 1 24194323 24196916 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822065,nsv822076,nsv822087 M 31 0 14 "" AK12,AK14,AK18,AK20,AK6,AK8,NA18542,NA18547,NA18570,NA18592,NA18942,NA18951,NA18969,NA18973 dgv192n54 1 24194974 24196253 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545783,nsv545782,nsv545786,nsv545785,nsv545784,nsv545792,nsv545791,nsv545790 M 17421 0 74 "" dgv193n54 1 24194974 24196802 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545789,nsv545797,nsv545788,nsv545787,nsv545794,nsv545793 M 17421 0 93 "" dgv194n54 1 24195352 24196253 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545796,nsv545795 M 17421 0 2 "" nsv545798 1 24195352 24199506 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711510 M 17421 0 1 "" dgv195n54 1 24195558 24196253 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545801,nsv545799 M 17421 0 4 "" nsv545800 1 24195558 24196498 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711513 M 17421 0 1 "" dgv196n54 1 24195701 24196802 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545804,nsv545802,nsv545803 M 17421 0 4 "" esv2745452 1 24211588 24212668 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6780883,essv6972364,essv6668970,essv6967940,essv6961575,essv6954760,essv6950574,essv6785001 M 96 0 8 "" SSM025,SSM026,SSM027,SSM028,SSM029,SSM031,SSM068,SSM069 esv2745463 1 24211980 24212094 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6668970,essv6954760 M 96 0 2 "" SSM026,SSM031 esv2745475 1 24212058 24212668 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6780883,essv6692780,essv6785001 M 96 0 3 "" SSM037,SSM068,SSM069 nsv475891 1 24213656 24213656 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015467 M 9 1 0 "" NA12878 nsv822098 1 24229509 24230297 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1434162 M 31 0 1 "" NA18570 esv2762309 1 24231270 24245590 CNV loss Vogler_et_al_2010 21179565 Merging,SNP array essv7008744 M 1109 0 1 "" SW_1506 nsv469575 1 24253207 24449906 CNV loss Locke_et_al_2006 16826518 BAC aCGH nssv1676636 M 265 0 1 "" esv1964436 1 24265893 24266272 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4922131 M 1 0 1 "" NA18507 nsv834447 1 24323093 24478718 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444085 M 95 0 1 "" esv2745486 1 24326474 24327064 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6972365 M 96 0 1 "" SSM029 esv3426242 1 24335578 24335578 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8740957 M 185 1 0 "" NA19240 nsv950302 1 24339811 24352410 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997097 M 1 0 1 "" BILGI_BIOE esv2745497 1 24344890 24345236 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6793303,essv6699601,essv6725855 M 96 0 3 "" SSM039,SSM046,SSM071 esv1739869 1 24345073 24345073 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4074743 M 2 1 0 "" HuRef esv1745617 1 24345275 24345275 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv4185921 M 2 1 0 "" HuRef esv994910 1 24448406 24452021 CNV insertion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3565699 M 3 1 0 "" HuRef esv2675642 1 24461307 24461632 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6292877,essv6125001,essv5995185,essv5546110,essv6102526,essv6049949 M 1151 0 6 "" NA18867,NA18870,NA19129,NA19707,NA20294,NA20322 nsv6965 1 24468506 24488652 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv1967 M 9 0 1 "" NA18555 nsv545805 1 24471893 24480524 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711522,nssv711521,nssv711520 M 17421 0 3 "" esv2670447 1 24477655 24483202 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5977901,essv5438808,essv5725222,essv5499710,essv5641460,essv6266555,essv6431983,essv5782178,essv6322013,essv6574503,essv6461066,essv6038566,essv5911074,essv6451545,essv6513308 M 1151 0 15 "" HG00403,HG00422,HG00428,HG00443,HG00472,HG00536,HG00583,HG00596,HG00610,HG00613,HG00625,HG00628,HG00657,HG00662,HG00704 esv23193 1 24477807 24481150 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv9733,esv19100 M 40 0 4 "" NA11931,NA11993,NA12489,NA12749 esv2745508 1 24478037 24481018 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6821193,essv6874718,essv6769530,essv6695754,essv6744946 M 96 0 5 "" SSM006,SSM055,SSM065,SSM079,SSM092 esv2670985 1 24478046 24480950 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5944543,essv6470865,essv5844997,essv5788791,essv5551148,essv6428469,essv5676327,essv6428266,essv6167767,essv5767065,essv6023618,essv5961587,essv6299811,essv5974962,essv6545275,essv6413073,essv5811807,essv6511706,essv5721262,essv5469076,essv6069134,essv6003210,essv6136615,essv6286480,essv6243194,essv6286316,essv5809900,essv5725333,essv6043918,essv5766700,essv6332341,essv6182738,essv5899702,essv6590748,essv5914147,essv5530633,essv6556738,essv5719976,essv6380878,essv6584179,essv6359428,essv6297211,essv6171268,essv6596716,essv5948982,essv5692325,essv5701823,essv5420719,essv6459993,essv6094043,essv6528259,essv6075146,essv5677268,essv5538944,essv5706652,essv5785035,essv6576837,essv5532188,essv5702489,essv5817113,essv6375670,essv5801792,essv6367232,essv6130210,essv6143711,essv6387008,essv5683875,essv6414568,essv5686445,essv6222302,essv6249655,essv5768654,essv5494686,essv6248581,essv6062247,essv6039526,essv5836163,essv6052799,essv6002457,essv6175661,essv6038544,essv6230216,essv5855936,essv5863364,essv6476858,essv5838845,essv5877550,essv6050708,essv6432220,essv5561848,essv6275951,essv5981797,essv5531999,essv5850053,essv5912186,essv5662170,essv6203028,essv6539074,essv6199614,essv5487086,essv5889410,essv5648622,essv6076186,essv5548274,essv6190534,essv6595541,essv6170420,essv6301264,essv5525382,essv6315914,essv5938733,essv5536283,essv6519849,essv5812137,essv6147689,essv5906583,essv5507348,essv6387214,essv5419749,essv5878782,essv6117357,essv6124308,essv5501005,essv6089604,essv6411509,essv5512001,essv5486001,essv6483266,essv6149973,essv6118937,essv5568354,essv5668897,essv5862120,essv5613639,essv5625856,essv5937699,essv6023826,essv6204281,essv6468491,essv6134882,essv5469783,essv5863230,essv6060329,essv6057512,essv6242230,essv6574936,essv5500312,essv6423320,essv5861254,essv6348073,essv6086634,essv6436678,essv6230076,essv5968164,essv6403161,essv6422152,essv6424986,essv5531321 M 1151 0 158 "" HG00112,HG00117,HG00119,HG00123,HG00127,HG00148,HG00159,HG00160,HG00173,HG00178,HG00231,HG00239,HG00244,HG00256,HG00261,HG00276,HG00306,HG00309,HG00310,HG00311,HG00320,HG00328,HG00330,HG00334,HG00339,HG00372,HG00422,HG00428,HG00443,HG00472,HG00534,HG00536,HG00559,HG00583,HG00613,HG00625,HG00637,HG00640,HG00641,HG00657,HG00662,HG00672,HG00701,HG00704,HG00705,HG01061,HG01069,HG01075,HG01102,HG01124,HG01136,HG01167,HG01176,HG01342,HG01366,HG01374,HG01375,HG01377,HG01437,NA06984,NA11933,NA12272,NA12348,NA12383,NA12399,NA12718,NA12748,NA12842,NA18486,NA18536,NA18543,NA18544,NA18546,NA18561,NA18565,NA18574,NA18576,NA18582,NA18597,NA18602,NA18617,NA18618,NA18619,NA18623,NA18626,NA18631,NA18633,NA18638,NA18868,NA18874,NA18910,NA18924,NA18956,NA18960,NA18961,NA18977,NA18982,NA18985,NA18988,NA18989,NA19010,NA19054,NA19058,NA19060,NA19065,NA19082,NA19189,NA19247,NA19315,NA19318,NA19332,NA19347,NA19377,NA19379,NA19380,NA19393,NA19394,NA19398,NA19403,NA19429,NA19434,NA19444,NA19452,NA19461,NA19462,NA19471,NA19473,NA19655,NA19660,NA19661,NA19663,NA19675,NA19679,NA19681,NA19684,NA19685,NA19701,NA19703,NA19711,NA19720,NA19759,NA19785,NA19904,NA19909,NA19920,NA19921,NA20281,NA20314,NA20512,NA20521,NA20533,NA20761,NA20770,NA20787,NA20798,NA20799,NA20808,NA20815 nsv498665 1 24478046 24480960 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585415 M 9 0 1 "" dgv197n54 1 24478804 24480343 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545806,nsv545811,nsv545810,nsv545807,nsv545814 M 17421 0 5 "" dgv198n54 1 24478804 24480696 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545813,nsv545812,nsv545809,nsv545808,nsv545815 M 17421 0 117 "" nsv822109 1 24479204 24480370 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1431800 M 31 0 1 "" AK20 dgv31n67 1 24479204 24481432 CNV loss Park_et_al_2010 20364138 Oligo aCGH nsv822120,nsv822131 M 31 0 6 "" AK16,NA18537,NA18547,NA18582,NA18949,NA18969 dgv199n54 1 24479400 24480696 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545816,nsv545821,nsv545822,nsv545820,nsv545817,nsv545818,nsv545819 M 17421 0 18 "" nsv513983 1 24479403 24480215 CNV loss Campbell_et_al_2011 21397061 Oligo aCGH nssv2857356,nssv2857331,nssv2857403,nssv2857386,nssv2857348,nssv2857357,nssv2857402,nssv2857413,nssv2857363,nssv2857352,nssv2857380,nssv2857334,nssv2857385,nssv2857388,nssv2857353,nssv2857343,nssv2857367,nssv2857414,nssv2857384,nssv2857369,nssv2857389,nssv2857374,nssv2857362,nssv2857404,nssv2857387,nssv2857407,nssv2857327,nssv2857338,nssv2857350,nssv2857329,nssv2857398,nssv2857345,nssv2857355,nssv2857392,nssv2857336,nssv2857342,nssv2857365,nssv2857335,nssv2857326,nssv2857417,nssv2857405,nssv2857396,nssv2857381,nssv2857359,nssv2857341,nssv2857344,nssv2857395,nssv2857340,nssv2857339,nssv2857411,nssv2857347,nssv2857401,nssv2857371,nssv2857364,nssv2857391,nssv2857368,nssv2857410,nssv2857376,nssv2857383,nssv2857337,nssv2857416,nssv2857394,nssv2857358,nssv2857346,nssv2857330,nssv2857397,nssv2857360,nssv2857408,nssv2857372,nssv2857409,nssv2857351,nssv2857390,nssv2857349,nssv2857332,nssv2857354,nssv2857393,nssv2857373,nssv2857377,nssv2857375,nssv2857415,nssv2857366,nssv2857399,nssv2857361,nssv2857382,nssv2857406,nssv2857328,nssv2857412,nssv2857400,nssv2857378,nssv2857379,nssv2857333,nssv2857418,nssv2857370 M 2366 0 93 "" NA06984,NA07349,NA10837,NA10850,NA10857,NA10860,NA11830,NA11840,NA11893,NA11993,NA12043,NA12272,NA12344,NA12348,NA12375,NA12383,NA12399,NA12489,NA12708,NA12718,NA12748,NA12749,NA12753,NA12763,NA12829,NA12832,NA12842,NA12877,NA12890,NA18486,NA18497,NA18510,NA18537,NA18547,NA18555,NA18558,NA18576,NA18582,NA18633,NA18859,NA18860,NA18868,NA18874,NA18910,NA18911,NA18917,NA18924,NA18949,NA18956,NA18960,NA18961,NA18969,NA18980,NA18981,NA18992,NA18995,NA19000,NA19092,NA19096,NA19097,NA19098,NA19101,NA19117,NA19149,NA19151,NA19152,NA19153,NA19154,NA19160,NA19179,NA19184,NA19185,NA19189,NA19191,NA19193,NA19197,NA19200,NA19201,NA19202,NA19205,NA19209,NA19210,NA19211,NA19225,NA19247,NA19249,NA21391,NA21399,NA21476,NA21514,NA21525,NA21581,NA21583 esv1298380 1 24495079 24495079 CNV insertion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3759955 M 2 1 0 "" HuRef nsv472981 1 24523197 24523197 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020463 M 9 1 0 "" NA19129 nsv545823 1 24568506 24621457 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711663 M 17421 1 0 "" nsv436645 1 24568967 24575752 CNV deletion Korbel_et_al_2007 17901297 FISH,Oligo aCGH,PCR,Sequencing nssv465929 M 2 0 1 "" NA18505 dgv31e199 1 24569169 24574377 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2676241,esv2675930 M 1151 0 32 "" HG01390,NA18486,NA18487,NA18498,NA18505,NA18508,NA18511,NA18522,NA18853,NA18874,NA18910,NA18912,NA18924,NA18933,NA19098,NA19152,NA19172,NA19204,NA19207,NA19210,NA19235,NA19311,NA19313,NA19331,NA19395,NA19436,NA19449,NA19466,NA19654,NA19704,NA19711,NA19834 esv27046 1 24569305 24574653 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv13814 M 40 0 3 "" NA18505,NA18508,NA18511 nsv834458 1 24577828 24669644 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444096 M 95 0 1 "" esv1961948 1 24602114 24602782 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4674738 M 1 0 1 "" NA18507 esv2665308 1 24602304 24602590 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6432556,essv6358573,essv6433569,essv6013804,essv6526222,essv5816663,essv6465990,essv5734067,essv6447770,essv5765750,essv6496607,essv6077142,essv6494969,essv5712599,essv6421404,essv5722616,essv6408206,essv6387071,essv6500505,essv6104522,essv5746116,essv5912861,essv5969827,essv6387852,essv5705755,essv5756969,essv6199634,essv5569192,essv6022447,essv5939585,essv5604401,essv5634883,essv6240158,essv5479800,essv6188318,essv6355607,essv5984778,essv5972078,essv5604757,essv6319652,essv5528341,essv5511314,essv5964681,essv5593183,essv5411889 M 1151 0 45 "" HG01051,HG01098,HG01366,HG01390,NA18486,NA18498,NA18511,NA18522,NA18853,NA18871,NA18874,NA18910,NA18912,NA18916,NA18923,NA19093,NA19189,NA19197,NA19210,NA19238,NA19240,NA19311,NA19332,NA19360,NA19371,NA19372,NA19379,NA19384,NA19401,NA19404,NA19429,NA19436,NA19443,NA19445,NA19446,NA19457,NA19469,NA19703,NA19704,NA19834,NA19908,NA19916,NA19917,NA20341,NA20348 nsv473361 1 24613883 24613883 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012740 M 9 1 0 "" NA19129 esv2560351 1 24614157 24614950 CNV insertion McKernan_et_al_2009 19546169 Sequencing essv5277621 M 1 1 0 "" NA18507 nsv160922 1 24632253 24640519 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv179500 M 24 "" nsv947416 1 24658051 24664478 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2766073 M 97 1 0 "" HGDP00998 nsv460862 1 24660386 24713376 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537354 M 1557 0 1 "" HGDP00974 nsv545824 1 24660386 24713376 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173800 M 17421 0 1 "" HGDP00974 esv2745519 1 24668021 24670680 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6766558,essv6797459,essv6729634,essv6877672 M 96 0 4 "" SSM047,SSM064,SSM072,SSM093 nsv945828 1 24672310 24673077 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766066,nssv1766111,nssv1766138,nssv1766107,nssv1766139,nssv1766148,nssv1766143,nssv1766088,nssv1766067,nssv1766081,nssv1766071,nssv1766137,nssv1766147,nssv1766150,nssv1766070,nssv1766115,nssv1766140,nssv1766118,nssv1766069,nssv1766126,nssv1766063,nssv1766084,nssv1766144,nssv1766094,nssv1766079,nssv1766093,nssv1766077,nssv1766120,nssv1766146,nssv1766110,nssv1766075,nssv1766095,nssv1766064,nssv1766086,nssv1766080,nssv1766090,nssv1766065,nssv1766096,nssv1766076,nssv1766156,nssv1766074,nssv1766128,nssv1766142,nssv1766061,nssv1766078,nssv1766103,nssv1766141,nssv1766112,nssv1766072,nssv1766097,nssv1766062,nssv1766087,nssv1766068,nssv1766083,nssv1766073,nssv1766153,nssv1766151,nssv1766130,nssv1766114,nssv1766129,nssv1766145,nssv1766092,nssv1766123,nssv1766108,nssv1766132,nssv1766154,nssv1766155,nssv1766152,nssv1766124,nssv1766125,nssv1766102,nssv1766134,nssv1766105,nssv1766116,nssv1766133,nssv1766106,nssv1766149,nssv1766099,nssv1766122,nssv1766082,nssv1766104,nssv1766117,nssv1766101,nssv1766121,nssv1766131,nssv1766113,nssv1766127,nssv1766109,nssv1766100,nssv1766157,nssv1766085,nssv1766135,nssv1766091,nssv1766119,nssv1766136,nssv1766089,nssv1766098 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv522437 1 24754031 24860225 CNV gain Shaikh_et_al_2009 19592680 SNP array nssv705795 M 2026 1 0 "" nsv7076 1 24789827 24870137 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv973,nssv3984,nssv1983 M 9 0 3 "" NA12878,NA18555,NA19240 esv2525447 1 24831229 24835262 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5183045 M 1 0 1 "" NA18507 esv7429 1 24831935 24835233 CNV loss Ahn_et_al_2009 19470904 Sequencing essv29870 M 1 0 0 "" esv2082154 1 24831999 24835228 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4974766 M 1 0 1 "" NA18507 nsv511684 1 24832054 24835250 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626323 M 1 0 1 "" 1 esv3809 1 24832179 24835088 CNV loss Wang_et_al_2008 18987735 Sequencing essv26250 M 1 0 1 "" YH esv2745530 1 24832180 24835034 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6906104,essv6871727,essv6742152,essv6916819,essv6859203,essv6750616,essv6773446,essv6748520,essv6839985,essv6821194,essv6801625,essv6876998,essv6829022,essv6847037,essv6880425,essv6689273,essv6776946,essv6766559,essv6686160,essv6874719,essv6668971,essv6832608,essv6780884,essv6675210,essv6843900,essv6972366,essv6933319,essv6961576,essv6892328,essv6843932,essv6836197,essv6810345,essv6703870,essv6784754,essv6793304,essv6941797,essv6910059,essv6967942,essv6714256,essv6921737,essv6696997,essv6902549,essv6666908,essv6863969,essv6764172,essv6718172,essv6679183,essv6753507,essv6898618,essv6813179,essv6722016,essv6816809,essv6917446,essv6937691,essv6889015,essv6804409,essv6738818,essv6759058,essv6707277,essv6797460,essv6682837,essv6802265,essv6954761,essv6868722,essv6865263,essv6735983,essv6883262,essv6729635,essv6895853,essv6885990,essv6733494,essv6747793,essv6950575,essv6719020,essv6925701,essv6914006,essv6929066,essv6669332,essv6769532,essv6853252,essv6692781,essv6824991,essv6710600,essv6946510,essv6761869,essv6789164,essv6816596,essv6756560,essv6807382,essv6695765,essv6950329,essv6744947,essv6699602,essv6785002,essv6877673,essv6725856 M 96 0 96 "" SSM001,SSM002,SSM003,SSM004,SSM005,SSM006,SSM007,SSM008,SSM009,SSM010,SSM011,SSM012,SSM013,SSM014,SSM015,SSM016,SSM017,SSM018,SSM019,SSM020,SSM021,SSM022,SSM023,SSM024,SSM025,SSM026,SSM027,SSM028,SSM029,SSM030,SSM031,SSM032,SSM033,SSM034,SSM035,SSM036,SSM037,SSM038,SSM039,SSM040,SSM041,SSM042,SSM043,SSM044,SSM045,SSM046,SSM047,SSM049,SSM050,SSM052,SSM053,SSM055,SSM056,SSM057,SSM058,SSM059,SSM061,SSM062,SSM063,SSM064,SSM065,SSM066,SSM067,SSM068,SSM069,SSM070,SSM071,SSM072,SSM073,SSM074,SSM075,SSM076,SSM077,SSM078,SSM079,SSM080,SSM081,SSM082,SSM083,SSM084,SSM085,SSM086,SSM087,SSM088,SSM089,SSM090,SSM091,SSM092,SSM093,SSM094,SSM095,SSM096,SSM097,SSM098,SSM099,SSM100 nsv498666 1 24832196 24835035 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585426 M 9 0 1 "" esv995974 1 24832199 24835020 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3571583 M 3 0 1 "" HuRef dgv2n73 1 24832210 24835031 CNV deletion Dogan_et_al_2014 24416366 Sequencing nsv956514,nsv950313 M 1 0 1 "" BILGI_BIOE esv1446144 1 24832212 24835034 CNV deletion Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv3781063 M 2 0 1 "" HuRef esv995045 1 24832212 24837999 CNV deletion Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3564027 M 3 0 1 "" HuRef nsv160319 1 24832213 24835034 CNV deletion Mills_et_al_2006 16902084 Sequencing nssv178897 M 24 "" nsv945829 1 24843119 24844221 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766235,nssv1766254,nssv1766177,nssv1766203,nssv1766236,nssv1766201,nssv1766164,nssv1766249,nssv1766176,nssv1766188,nssv1766163,nssv1766191,nssv1766240,nssv1766223,nssv1766168,nssv1766210,nssv1766237,nssv1766211,nssv1766162,nssv1766182,nssv1766241,nssv1766197,nssv1766167,nssv1766224,nssv1766175,nssv1766185,nssv1766160,nssv1766195,nssv1766161,nssv1766230,nssv1766239,nssv1766217,nssv1766174,nssv1766234,nssv1766243,nssv1766196,nssv1766173,nssv1766212,nssv1766166,nssv1766215,nssv1766171,nssv1766202,nssv1766172,nssv1766251,nssv1766238,nssv1766190,nssv1766159,nssv1766186,nssv1766169,nssv1766179,nssv1766165,nssv1766187,nssv1766170,nssv1766222,nssv1766244,nssv1766158,nssv1766221,nssv1766206,nssv1766220,nssv1766198,nssv1766245,nssv1766232,nssv1766181,nssv1766183,nssv1766209,nssv1766207,nssv1766208,nssv1766193,nssv1766204,nssv1766189,nssv1766248,nssv1766178,nssv1766229,nssv1766228,nssv1766199,nssv1766246,nssv1766192,nssv1766250,nssv1766200,nssv1766233,nssv1766225,nssv1766226,nssv1766216,nssv1766227,nssv1766247,nssv1766252,nssv1766213,nssv1766214,nssv1766231,nssv1766184,nssv1766219,nssv1766242,nssv1766218,nssv1766253,nssv1766180,nssv1766205,nssv1766194 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 esv2666206 1 24852253 24857543 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6495623,essv5789878,essv6128224,essv6257033,essv6375305,essv5595917,essv5663264 M 1151 0 7 "" HG00247,HG00256,HG01170,HG01353,NA07347,NA18613,NA19648 esv2676912 1 24875330 24877144 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5624314,essv6364089,essv5719321,essv5743179,essv6171360,essv6060659,essv6597131,essv5814707,essv5786661,essv6221636,essv6045505,essv6131769,essv5855472,essv5995495,essv6230682,essv6563092,essv6311922,essv5686297,essv5480758,essv6029705,essv6390559,essv5712086,essv6051384,essv5572604,essv6445070,essv5594196,essv5581784,essv5650557,essv5613087,essv6481745,essv5645591,essv6137910,essv5547532,essv6583252,essv5561533,essv5503349,essv6238313,essv6386766,essv5410620,essv5719706,essv5604107,essv6242585,essv6257988,essv6132954,essv6416129,essv5788096,essv6427064,essv6467934,essv6322336 M 1151 0 49 "" HG00638,HG01101,NA18519,NA18909,NA19099,NA19107,NA19130,NA19238,NA19239,NA19240,NA19256,NA19316,NA19317,NA19319,NA19327,NA19331,NA19332,NA19338,NA19346,NA19347,NA19360,NA19371,NA19373,NA19375,NA19399,NA19428,NA19430,NA19435,NA19436,NA19437,NA19438,NA19440,NA19443,NA19444,NA19446,NA19448,NA19452,NA19453,NA19457,NA19461,NA19462,NA19467,NA19468,NA19469,NA19472,NA19701,NA19703,NA19835,NA19920 esv26140 1 24875342 24876935 CNV loss Conrad_et_al_2009 19812545 Oligo aCGH esv10325 M 40 0 3 "" NA18909,NA19099,NA19240 nsv508581 1 24884488 24968228 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622760 M 4 0 1 "" NA18994 dgv12e201 1 25002233 25002602 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2745563,esv2745541 M 96 0 6 "" SSM008,SSM011,SSM014,SSM028,SSM035,SSM052 dgv13e201 1 25002323 25002526 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2745552,esv2745574 M 96 0 3 "" SSM011,SSM014,SSM028 esv3390012 1 25012974 25013872 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692243 M 185 1 0 "" NA19239 esv2745586 1 25019953 25020374 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6793305 M 96 0 1 "" SSM071 esv3416321 1 25035574 25037272 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692244 M 185 1 0 "" NA19240 esv3412285 1 25038374 25040472 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692245 M 185 1 0 "" NA19239 nsv526082 1 25083116 25092951 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv702326 M 2026 0 1 "" nsv471772 1 25084396 25084567 CNV loss Hinds_et_al_2006 16327809 Oligo aCGH,PCR nssv646053 M 95 "" esv2758928 1 25119019 25137360 CNV loss Redon_et_al_2006 17122850 BAC aCGH,SNP array esv2756839 M 270 0 1 "" NA18524 nsv945830 1 25120770 25125288 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766259,nssv1766533,nssv1766261,nssv1766542,nssv1766593,nssv1766579,nssv1766584,nssv1766565,nssv1766525,nssv1766603,nssv1766523,nssv1766562,nssv1766526,nssv1766529,nssv1766590,nssv1766599,nssv1766517,nssv1766567,nssv1766260,nssv1766563,nssv1766589,nssv1766569,nssv1766257,nssv1766544,nssv1766516,nssv1766573,nssv1766524,nssv1766578,nssv1766263,nssv1766575,nssv1766258,nssv1766546,nssv1766588,nssv1766534,nssv1766586,nssv1766577,nssv1766522,nssv1766537,nssv1766592,nssv1766583,nssv1766521,nssv1766570,nssv1766520,nssv1766602,nssv1766585,nssv1766582,nssv1766256,nssv1766535,nssv1766518,nssv1766559,nssv1766587,nssv1766566,nssv1766262,nssv1766581,nssv1766519,nssv1766540,nssv1766531,nssv1766547,nssv1766530,nssv1766550,nssv1766551,nssv1766541,nssv1766564,nssv1766536,nssv1766594,nssv1766539,nssv1766557,nssv1766561,nssv1766555,nssv1766591,nssv1766556,nssv1766528,nssv1766552,nssv1766532,nssv1766596,nssv1766571,nssv1766576,nssv1766600,nssv1766601,nssv1766572,nssv1766548,nssv1766538,nssv1766527,nssv1766553,nssv1766543,nssv1766558,nssv1766255,nssv1766549,nssv1766574,nssv1766545,nssv1766598,nssv1766597,nssv1766580,nssv1766595,nssv1766568,nssv1766554,nssv1766560 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv523480 1 25132941 25134157 CNV loss Shaikh_et_al_2009 19592680 SNP array nssv699245 M 2026 0 1 "" esv2745597 1 25166816 25166959 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6725857 M 96 0 1 "" SSM046 nsv818112 1 25193132 25199390 CNV loss Wang_et_al_2007 17921354 SNP array nssv1417310 M 112 0 1 "" NA18608 nsv7187 1 25197127 25229506 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6432 M 9 1 0 "" NA12156 esv2658297 1 25209387 25213261 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6064166 M 1151 0 1 "" NA19900 nsv475560 1 25231109 25231109 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015177 M 9 1 0 "" NA19240 nsv7298 1 25244577 25345647 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6442,nssv10899,nssv9806,nssv3995 M 9 0 4 "" NA12156,NA12878,NA15510,NA18507 nsv232 1 25246527 25345647 CNV deletion Tuzun_et_al_2005 15895083 BAC aCGH,PCR,Sequencing nssv232 M 1 0 1 "" NA15510 nsv545825 1 25247031 25320442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711664 M 17421 0 1 "" nsv954908 1 25251924 25252170 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv3000418 M 1 0 1 "" BILGI_BIOE nsv834469 1 25255915 25436044 CNV gain+loss Wong_et_al_2007 17160897 BAC aCGH nssv1444196,nssv1444207,nssv1444218,nssv1444118,nssv1444107,nssv1444140,nssv1444129,nssv1444173,nssv1444151,nssv1444162,nssv1444185,nssv1444229,nssv1444240 M 95 2 11 "" esv2762632 1 25256138 25390874 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7008966,essv7010521,essv7011188,essv7022077,essv7012632,essv7020410,essv7009633,essv7012188,essv7010299,essv7021743,essv7017411,essv7009521,essv7020299,essv7016077,essv7011521,essv7012521,essv7021299,essv7018299,essv7016744,essv7013189,essv7016411,essv7015633,essv7017188,essv7018188,essv7022188,essv7016188,essv7010410,essv7009744,essv7011966,essv7020966,essv7012743,essv7011077,essv7019966,essv7011410,essv7017077,essv7010077,essv7013300,essv7013744,essv7022299,essv7017522,essv7020077,essv7009077,essv7011632,essv7021077,essv7013522,essv7021410,essv7019188,essv7019521,essv7017855,essv7014411,essv7014522,essv7014744,essv7013633,essv7015189,essv7008855,essv7018855,essv7017966,essv7020855,essv7019633,essv7018522,essv7018966,essv7009410,essv7018077,essv7012967,essv7014966,essv7016522,essv7015300,essv7015522,essv7018744,essv7010855,essv7019744,essv7015744,essv7021632,essv7019077,essv7009966,essv7013078,essv7010188,essv7018633,essv7016966,essv7010966,essv7014078,essv7009188,essv7010744,essv7014300,essv7021521,essv7011299,essv7020521,essv7019855,essv7012410,essv7014633,essv7013966,essv7015411,essv7015077,essv7020632,essv7013411,essv7013855,essv7012077,essv7011743,essv7010632,essv7012299,essv7016855,essv7019410,essv7020188,essv7015966,essv7021855,essv7009855,essv7014189,essv7021188,essv7021966,essv7017633,essv7014855,essv7011855,essv7020744,essv7017744,essv7019299,essv7016633,essv7016300,essv7009299,essv7015855,essv7017299,essv7018410,essv7012854 M 1109 5 93 "" SW_0007,SW_0016,SW_0017,SW_0030,SW_0047,SW_0049,SW_0086,SW_0091,SW_0113,SW_0143,SW_0144,SW_0146,SW_0165,SW_0184,SW_0187,SW_0203,SW_0216,SW_0227,SW_0230,SW_0241,SW_0255,SW_0268,SW_0286,SW_0340,SW_0351,SW_0353,SW_0554,SW_0593,SW_0619,SW_0635,SW_0716,SW_0717,SW_0762,SW_0803,SW_0805,SW_0814,SW_0828,SW_0832,SW_0847,SW_0860,SW_0871,SW_0873,SW_0890,SW_1034,SW_1039,SW_1044,SW_1049,SW_1053,SW_1077,SW_1080,SW_1085,SW_1092,SW_1093,SW_1095,SW_1106,SW_1111,SW_1122,SW_1152,SW_1166,SW_1170,SW_1171,SW_1182,SW_1188,SW_1199,SW_1211,SW_1215,SW_1225,SW_1235,SW_1249,SW_1254,SW_1258,SW_1261,SW_1267,SW_1276,SW_1283,SW_1295,SW_1299,SW_1308,SW_1313,SW_1318,SW_1330,SW_1333,SW_1337,SW_1364,SW_1374,SW_1389,SW_1392,SW_1393,SW_1396,SW_1407,SW_1431,SW_1441,SW_1448,SW_1470,SW_1503,SW_1506,SW_1535,SW_1570 nsv9768 1 25256824 25441125 CNV gain+loss Perry_et_al_2008 18304495 Oligo aCGH nssv12770,nssv13100,nssv15435,nssv15105,nssv14101,nssv14745,nssv15433,nssv13416,nssv13743,nssv13106,nssv14747,nssv13771,nssv15764,nssv16428,nssv13764,nssv13438,nssv17074,nssv15434,nssv12115,nssv15111,nssv16094,nssv12776,nssv13088,nssv13413,nssv15763,nssv14742,nssv13108,nssv15102,nssv17404,nssv29252,nssv14751,nssv13086,nssv14417,nssv18443,nssv13418,nssv13434,nssv15450,nssv12772,nssv16744,nssv13083,nssv14749 M 31 21 1 "" NA07048,NA10839,NA10847,NA10863,NA12155,NA18502,NA18504,NA18517,NA18537,NA18563,NA18564,NA18572,NA18853,NA18860,NA18942,NA18972,NA18975,NA18980,NA19007,NA19144,NA19221,NA19240 nsv822143 1 25258525 25338895 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1422364,nssv1433413,nssv1430337 M 31 0 3 "" AK16,NA18526,NA18552 nsv821372 1 25258525 25338941 CNV deletion Ju_et_al_2010 20802225 Sequencing nssv1420280 M 1 0 1 "" NA10851 esv22615 1 25258734 25338704 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv17091,esv19712 M 40 24 6 "" NA07045,NA11894,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12749,NA12776,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 esv32921 1 25258854 25338367 CNV gain+loss de_Smith_et_al_2007 17666407 Oligo aCGH essv95026,essv100169,essv101732,essv93733,essv101286,essv96835 M 51 3 3 "" 21659,21805,21909,21972,22231,22286 dgv3e180 1 25258945 25338322 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array esv1009924,esv990723 M 3 1 0 "" HuRef esv2745608 1 25259755 25329768 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6756561 M 96 0 1 "" SSM059 nsv945831 1 25260030 25293460 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766609,nssv1764627,nssv1764633,nssv1764621,nssv1766608,nssv1766636,nssv1764631,nssv1766628,nssv1766610,nssv1764618,nssv1766622,nssv1764609,nssv1764630,nssv1766625,nssv1764635,nssv1764636,nssv1766614,nssv1764600,nssv1764629,nssv1764620,nssv1766623,nssv1764622,nssv1766606,nssv1764607,nssv1764632,nssv1764604,nssv1764638,nssv1766631,nssv1766613,nssv1764624,nssv1766621,nssv1766604,nssv1766620,nssv1764603,nssv1766618,nssv1766638,nssv1766612,nssv1764619,nssv1766617,nssv1766634,nssv1766619,nssv1764614,nssv1766607,nssv1764628,nssv1766611,nssv1764612,nssv1766615,nssv1764605,nssv1764637,nssv1766624,nssv1766605,nssv1766637,nssv1764634,nssv1764597,nssv1766616,nssv1764611,nssv1766627,nssv1764617,nssv1764616,nssv1766632,nssv1764623,nssv1764608,nssv1766626,nssv1764602,nssv1766629,nssv1766633,nssv1764595,nssv1764596,nssv1764625,nssv1764613,nssv1764601,nssv1764615,nssv1766630,nssv1766635,nssv1764626,nssv1764610,nssv1764598,nssv1764606,nssv1764599,nssv1764594 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv200n54 1 25262655 25300841 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545830,nsv545833,nsv545826 M 17421 0 11 "" esv2421857 1 25262655 25335721 CNV deletion Altshuler_et_al_2010 20811451 SNP array essv5058769,essv5037645,essv5130239,essv5024612,essv5076452,essv5136938,essv5043793,essv5004232,essv5035986,essv5012416,essv5133792,essv5054446,essv5002155,essv5128808,essv5117026,essv5091674,essv5142370,essv5056633,essv5079054,essv5130187,essv5142820,essv5009261,essv5025505,essv5008097,essv5128978,essv5068330,essv5058796,essv5067460,essv5073065,essv5034340,essv5059333,essv5090256,essv5141412,essv5009382,essv5091462,essv5147815,essv5131302,essv5144277,essv5003442,essv5020784,essv5016021,essv5096398,essv5003366,essv5136889,essv5155647,essv5095663,essv5039122,essv5128183,essv5131476,essv5023035,essv5077667,essv5154564,essv5157623,essv5150816,essv5017143,essv5066670,essv5023178,essv5157836,essv5057948,essv5156244,essv5010813,essv5157677,essv5053567,essv5022144,essv5007440,essv5143932,essv5156202,essv5018506,essv5070008,essv5037674,essv5105085,essv5048597,essv5124582,essv5125039,essv5148164,essv5082433,essv5121511,essv5113984,essv5152554,essv5038039,essv5099229,essv5123095,essv5082163,essv5154775,essv5044859,essv5056082,essv5023208,essv5122226,essv5143595,essv5080950,essv5128345,essv5115091,essv5128108,essv5118896,essv5134564,essv5069190,essv5010857,essv5120048,essv5121794,essv5125105,essv5135855,essv5151355,essv5033012,essv5122105,essv5053175,essv5113393,essv5082883,essv5130740,essv5092242,essv5122788,essv5133513,essv5014537,essv5145086,essv5047169,essv5138177,essv5083463,essv5021447,essv5028311,essv5059401,essv5135973,essv5022476,essv5004315,essv5105392,essv5146558,essv5125283,essv5124398,essv5035013,essv5151593,essv5065734,essv5065928,essv5040974,essv5037893,essv5059254,essv5098695,essv5107616,essv5088003,essv5014510,essv5048811,essv5090060,essv5013628,essv5111829,essv5114671,essv5116093,essv5012871,essv5041714,essv5095554,essv5008221,essv5076093,essv5127709,essv5157994,essv5133094,essv5044349,essv5007583,essv5027267,essv5132115,essv5158031,essv5147945,essv5153623,essv5029243,essv5069482,essv5050338,essv5158872,essv5149523,essv5097618,essv5094217,essv5045154,essv5079399,essv5028430,essv5053235,essv5138232,essv5085338,essv5145360,essv5020838,essv5158951,essv5088120,essv5159485,essv5139596,essv5036702,essv5080575,essv5152069,essv5138781,essv5091441,essv5147272,essv5030906,essv5005217,essv5122992,essv5017876,essv5076799,essv5048844,essv5010391,essv5141824,essv5047152,essv5037688,essv5079981,essv5066634,essv5002879,essv5015901,essv5160623,essv5145980,essv5145070,essv5135986,essv5003958,essv5078382,essv5018977,essv5109110,essv5109647,essv5108701,essv5056096,essv5118643,essv5058251,essv5064492,essv5064974,essv5118565,essv5046481,essv5116136,essv5063196,essv5093377,essv5152955,essv5033301,essv5081685,essv5026739,essv5068241,essv5130611,essv5135218,essv5026235,essv5125910,essv5137308,essv5051480,essv5045453,essv5054376,essv5065634,essv5124630,essv5085137,essv5088678,essv5022767,essv5015825,essv5024154,essv5033915,essv5155256,essv5130404,essv5136383,essv5106070,essv5078911,essv5025353,essv5021910,essv5120740,essv5137751,essv5065371,essv5079059,essv5105366,essv5024098,essv5009459,essv5087504,essv5113590,essv5024213,essv5009799,essv5055292,essv5124430,essv5034606,essv5012855,essv5058217,essv5158180,essv5106123,essv5003226,essv5047766,essv5026565,essv5142656,essv5075759,essv5124283,essv5139792,essv5109869,essv5076833,essv5097823,essv5017260,essv5034343,essv5089551,essv5057653,essv5011384,essv5134977,essv5147235,essv5054650,essv5094025,essv5030807,essv5040904,essv5137440,essv5080406,essv5116489,essv5014447,essv5046028,essv5049421,essv5108293,essv5150897,essv5129477,essv5123139,essv5016090,essv5110081,essv5056058,essv5108066,essv5113423,essv5094802,essv5106367,essv5025268,essv5067157,essv5018521,essv5032508,essv5111735,essv5140307,essv5153011,essv5113903,essv5134935,essv5080467,essv5151764,essv5003234,essv5050184,essv5129683,essv5132018,essv5002344,essv5111192,essv5024116,essv5039265,essv5063006,essv5047101,essv5007672,essv5032861,essv5096259,essv5058426,essv5058514,essv5042292,essv5105430,essv5140020,essv5149063,essv5114255,essv5055329,essv5073133,essv5062085,essv5143138,essv5078460,essv5025216,essv5028365,essv5067947,essv5060529,essv5029065,essv5033550,essv5141369,essv5151146,essv5108756,essv5064696,essv5008817,essv5112124,essv5014373,essv5087858,essv5042185,essv5080281,essv5073403,essv5007066,essv5130660,essv5016991,essv5091094,essv5033778,essv5044887,essv5153490,essv5133133,essv5055624,essv5025602,essv5159704,essv5130794,essv5016506,essv5115319,essv5047974,essv5059029,essv5147839,essv5033407,essv5082929,essv5053389,essv5047250,essv5065254,essv5089045,essv5017565,essv5078218,essv5119807,essv5109954,essv5037110,essv5083652,essv5147588,essv5128172,essv5116864,essv5039765,essv5050776,essv5049893,essv5055335,essv5146020,essv5002183,essv5070189,essv5057263,essv5046501,essv5004352,essv5142111,essv5046014,essv5016370,essv5099909,essv5003311,essv5150619,essv5088421,essv5152295,essv5059195,essv5133677,essv5118360,essv5158850,essv5089622,essv5017327,essv5072538,essv5066801,essv5094386,essv5158896,essv5113628,essv5087709,essv5116211,essv5157141,essv5089478 M 1184 0 419 "" NA06984,NA06985,NA06989,NA06991,NA06993,NA06994,NA06995,NA06997,NA07022,NA07029,NA07031,NA07037,NA07045,NA07055,NA07056,NA07346,NA07349,NA07357,NA10830,NA10831,NA10835,NA10837,NA10838,NA10839,NA10843,NA10852,NA10853,NA10854,NA10855,NA10856,NA10859,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11882,NA11893,NA11917,NA11918,NA11919,NA11920,NA11930,NA11931,NA11992,NA11993,NA12003,NA12005,NA12006,NA12043,NA12044,NA12045,NA12056,NA12057,NA12144,NA12145,NA12154,NA12156,NA12234,NA12248,NA12272,NA12273,NA12282,NA12283,NA12335,NA12336,NA12340,NA12341,NA12342,NA12343,NA12344,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12400,NA12413,NA12489,NA12546,NA12707,NA12708,NA12716,NA12740,NA12751,NA12752,NA12753,NA12761,NA12763,NA12766,NA12775,NA12776,NA12802,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12832,NA12842,NA12843,NA12864,NA12872,NA12873,NA12874,NA12878,NA12890,NA12891,NA17980,NA17993,NA18102,NA18122,NA18154,NA18157,NA18159,NA18484,NA18488,NA18497,NA18507,NA18515,NA18516,NA18518,NA18519,NA18520,NA18526,NA18546,NA18552,NA18571,NA18599,NA18609,NA18613,NA18614,NA18615,NA18620,NA18631,NA18636,NA18640,NA18704,NA18855,NA18861,NA18863,NA18867,NA18869,NA18871,NA18872,NA18940,NA18946,NA18955,NA18960,NA18964,NA18994,NA19001,NA19054,NA19066,NA19075,NA19078,NA19079,NA19094,NA19095,NA19102,NA19107,NA19109,NA19117,NA19118,NA19122,NA19131,NA19132,NA19140,NA19141,NA19143,NA19146,NA19154,NA19171,NA19172,NA19173,NA19174,NA19175,NA19176,NA19181,NA19192,NA19193,NA19194,NA19200,NA19202,NA19203,NA19206,NA19209,NA19211,NA19214,NA19221,NA19222,NA19236,NA19237,NA19309,NA19317,NA19327,NA19350,NA19375,NA19379,NA19380,NA19382,NA19435,NA19448,NA19474,NA19649,NA19650,NA19652,NA19653,NA19654,NA19658,NA19659,NA19661,NA19662,NA19678,NA19680,NA19684,NA19685,NA19686,NA19700,NA19703,NA19716,NA19746,NA19749,NA19751,NA19773,NA19776,NA19778,NA19782,NA19784,NA19794,NA19819,NA19828,NA19900,NA19901,NA20276,NA20277,NA20279,NA20284,NA20287,NA20288,NA20289,NA20290,NA20297,NA20317,NA20319,NA20332,NA20333,NA20334,NA20335,NA20336,NA20342,NA20343,NA20344,NA20345,NA20349,NA20350,NA20356,NA20360,NA20363,NA20504,NA20505,NA20506,NA20509,NA20512,NA20516,NA20518,NA20519,NA20522,NA20524,NA20528,NA20529,NA20530,NA20534,NA20538,NA20539,NA20540,NA20541,NA20543,NA20586,NA20589,NA20752,NA20754,NA20755,NA20756,NA20759,NA20760,NA20761,NA20765,NA20766,NA20768,NA20770,NA20771,NA20773,NA20775,NA20778,NA20783,NA20785,NA20786,NA20787,NA20792,NA20796,NA20797,NA20801,NA20807,NA20808,NA20809,NA20811,NA20813,NA20819,NA20826,NA20846,NA20847,NA20849,NA20851,NA20852,NA20854,NA20858,NA20859,NA20861,NA20870,NA20871,NA20873,NA20875,NA20879,NA20882,NA20884,NA20885,NA20888,NA20891,NA20892,NA20894,NA20895,NA20896,NA20897,NA20899,NA20900,NA20902,NA20904,NA20908,NA20911,NA21089,NA21090,NA21091,NA21092,NA21100,NA21101,NA21102,NA21103,NA21104,NA21105,NA21107,NA21113,NA21115,NA21117,NA21118,NA21123,NA21137,NA21141,NA21143,NA21144,NA21295,NA21301,NA21302,NA21303,NA21333,NA21339,NA21353,NA21356,NA21359,NA21367,NA21371,NA21381,NA21385,NA21386,NA21390,NA21391,NA21399,NA21401,NA21402,NA21403,NA21404,NA21405,NA21423,NA21424,NA21434,NA21435,NA21436,NA21441,NA21473,NA21475,NA21478,NA21480,NA21488,NA21489,NA21490,NA21524,NA21574,NA21575,NA21583,NA21599,NA21600,NA21601,NA21631,NA21635,NA21636,NA21647,NA21648,NA21678,NA21717,NA21718,NA21738,NA21740,NA21825 dgv201n54 1 25262655 25339480 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545831,nsv545828,nsv545827,nsv545842,nsv545840,nsv545839,nsv545838,nsv545841 M 17421 0 44 "" nsv433185 1 25263132 25338175 CNV loss Cooper_et_al_2008 18776910 SNP array nssv463066 M 9 0 1 "" NA12156 nsv950324 1 25264110 25336209 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997099 M 1 0 1 "" BILGI_BIOE nsv820028 1 25264287 25337707 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1418757 M 2 1 0 "" AK1 esv2677880 1 25264454 25336301 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5800248,essv5540999,essv6125030,essv5466236,essv6512070 M 1151 0 5 "" HG01516,HG01518,HG01519,HG01521,HG01522 nsv498667 1 25264479 25336464 CNV loss Kidd_et_al_2010b 21111241 Sequencing nssv585437 M 9 0 1 "" esv2656832 1 25265254 25283901 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6414935,essv5706326,essv6337337,essv5867377,essv6361179,essv5653207,essv6121943,essv5990190,essv6316228,essv5741443,essv6227566,essv5903420,essv6465670,essv5775494,essv6435338,essv5727396,essv6222588,essv5770421,essv6534784,essv6062519,essv6567765,essv5703613,essv6149601,essv5615723,essv6354502,essv5588552,essv6107254,essv5676232,essv6260838,essv5735325,essv6412577,essv5939418,essv6415878,essv5768634,essv6237647,essv5777756,essv6544420,essv5828384,essv6482795,essv6016439,essv6120121,essv5767672,essv6209943,essv5451781,essv6139482,essv5781714,essv6570509,essv5902927,essv6287382,essv5584210,essv6586123,essv5796702,essv6587900,essv5870973,essv6461358,essv5432168,essv6570589,essv6057359,essv6191013,essv5676997,essv6208047,essv6049915,essv6597030,essv5521057,essv6310525,essv5611603,essv6079016,essv6063162,essv6575867,essv5887710,essv6258093,essv5969740,essv6296342,essv5553671,essv6042063,essv5562400,essv5920003,essv5636855,essv5490325,essv5416946,essv6033167,essv6024054,essv5571873,essv6052654,essv5980877,essv5916446,essv5632957,essv5600122,essv5516471 M 1151 0 89 "" HG00096,HG00100,HG00108,HG00116,HG00118,HG00119,HG00122,HG00124,HG00126,HG00127,HG00131,HG00133,HG00136,HG00137,HG00138,HG00140,HG00142,HG00143,HG00146,HG00148,HG00150,HG00151,HG00152,HG00155,HG00156,HG00157,HG00158,HG00171,HG00173,HG00174,HG00176,HG00177,HG00179,HG00181,HG00182,HG00185,HG00188,HG00189,HG00231,HG00236,HG00239,HG00242,HG00243,HG00249,HG00251,HG00252,HG00253,HG00254,HG00258,HG00261,HG00262,HG00263,HG00265,HG00266,HG00268,HG00272,HG00273,HG00274,HG00275,HG00277,HG00278,HG00281,HG00285,HG00310,HG00313,HG00315,HG00319,HG00321,HG00323,HG00324,HG00327,HG00329,HG00330,HG00334,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00353,HG00357,HG00366,HG00368,HG00375,HG00377,HG01334 nsv7174 1 25265296 25391733 OTHER inversion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv9262,nssv9251 M 9 0 0 "" NA18517 nsv513984 1 25266172 25337116 CNV gain Campbell_et_al_2011 21397061 Oligo aCGH nssv2858415,nssv2858387,nssv2856945,nssv2855874,nssv2857038,nssv2855849,nssv2856936,nssv2857008,nssv2858383,nssv2858411,nssv2857071,nssv2856941,nssv2856888,nssv2858375,nssv2857024,nssv2856928,nssv2856921,nssv2858448,nssv2856920,nssv2855863,nssv2856931,nssv2855799,nssv2855865,nssv2857036,nssv2857048,nssv2855858,nssv2856891,nssv2858469,nssv2858446,nssv2856900,nssv2858400,nssv2858372,nssv2857093,nssv2858367,nssv2858424,nssv2856914,nssv2858373,nssv2856910,nssv2858399,nssv2857074,nssv2858464,nssv2858394,nssv2858483,nssv2857079,nssv2856951,nssv2858368,nssv2858420,nssv2856971,nssv2856943,nssv2858457,nssv2858429,nssv2857033,nssv2855784,nssv2855860,nssv2857066,nssv2855819,nssv2858409,nssv2856994,nssv2856960,nssv2856899,nssv2857027,nssv2856995,nssv2858397,nssv2856924,nssv2855795,nssv2855789,nssv2856967,nssv2857062,nssv2855870,nssv2856939,nssv2858379,nssv2858480,nssv2855843,nssv2858407,nssv2855777,nssv2858487,nssv2856908,nssv2857032,nssv2856973,nssv2857089,nssv2856883,nssv2856948,nssv2856947,nssv2858390,nssv2857084,nssv2858378,nssv2858443,nssv2857023,nssv2856956,nssv2855815,nssv2856970,nssv2855817,nssv2856919,nssv2857081,nssv2855778,nssv2858456,nssv2858477,nssv2855806,nssv2858467,nssv2857003,nssv2858377,nssv2855850,nssv2858426,nssv2858369,nssv2856887,nssv2855842,nssv2855859,nssv2855814,nssv2855794,nssv2855834,nssv2858413,nssv2856930,nssv2856926,nssv2856959,nssv2855868,nssv2858414,nssv2856979,nssv2857088,nssv2858491,nssv2857063,nssv2857053,nssv2856999,nssv2855832,nssv2855871,nssv2856963,nssv2857046,nssv2857044,nssv2856984,nssv2855836,nssv2857069,nssv2858468,nssv2855801,nssv2857070,nssv2855872,nssv2858408,nssv2855792,nssv2858371,nssv2858382,nssv2855829,nssv2857009,nssv2858451,nssv2856915,nssv2858418,nssv2857091,nssv2857065,nssv2855822,nssv2856895,nssv2856976,nssv2855811,nssv2857078,nssv2858459,nssv2857005,nssv2857028,nssv2857083,nssv2856990,nssv2858419,nssv2858391,nssv2856917,nssv2857037,nssv2857010,nssv2857059,nssv2856942,nssv2856964,nssv2858454,nssv2857007,nssv2858434,nssv2858412,nssv2855828,nssv2857034,nssv2858389,nssv2857092,nssv2857075,nssv2858364,nssv2855847,nssv2857087,nssv2858365,nssv2858366,nssv2858405,nssv2856885,nssv2856949,nssv2857082,nssv2858489,nssv2857020,nssv2857013,nssv2857047,nssv2858381,nssv2858380,nssv2856997,nssv2857026,nssv2855790,nssv2855808,nssv2855773,nssv2858455,nssv2858442,nssv2855833,nssv2856985,nssv2856912,nssv2858428,nssv2856907,nssv2855837,nssv2857099,nssv2856957,nssv2856937,nssv2855820,nssv2855802,nssv2855812,nssv2858473,nssv2856880,nssv2855855,nssv2858444,nssv2858395,nssv2857077,nssv2858463,nssv2858374,nssv2856975,nssv2857057,nssv2856968,nssv2858386,nssv2858494,nssv2855869,nssv2855825,nssv2857055,nssv2857096,nssv2855840,nssv2855816,nssv2857056,nssv2857000,nssv2855788,nssv2856923,nssv2855810,nssv2855856,nssv2855841,nssv2858388,nssv2858460,nssv2856933,nssv2856950,nssv2856965,nssv2858493,nssv2855864,nssv2855775,nssv2855818,nssv2855797,nssv2857043,nssv2858474,nssv2856901,nssv2857004,nssv2858478,nssv2856981,nssv2857060,nssv2858404,nssv2858482,nssv2858431,nssv2855800,nssv2858438,nssv2858453,nssv2855830,nssv2856983,nssv2856980,nssv2856996,nssv2856944,nssv2855786,nssv2858436,nssv2856896,nssv2855805,nssv2858410,nssv2858417,nssv2856929,nssv2857031,nssv2856991,nssv2855783,nssv2856935,nssv2857098,nssv2857067,nssv2856893,nssv2856911,nssv2857049,nssv2855831,nssv2858472,nssv2858484,nssv2857054,nssv2857051,nssv2857094,nssv2856986,nssv2856902,nssv2858450,nssv2858458,nssv2858435,nssv2856909,nssv2857068,nssv2855803,nssv2855857,nssv2856946,nssv2858432,nssv2857042,nssv2855774,nssv2856972,nssv2855827,nssv2855866,nssv2855851,nssv2856977,nssv2858370,nssv2857011,nssv2858403,nssv2858490,nssv2856905,nssv2855821,nssv2858421,nssv2855776,nssv2855785,nssv2858385,nssv2857014,nssv2857019,nssv2858416,nssv2855791,nssv2856886,nssv2858452,nssv2855854,nssv2855824,nssv2857006,nssv2857080,nssv2857017,nssv2857041,nssv2856993,nssv2855838,nssv2858396,nssv2858481,nssv2856890,nssv2856989,nssv2856918,nssv2856922,nssv2858445,nssv2858485,nssv2858466,nssv2858471,nssv2856898,nssv2858479,nssv2856978,nssv2855862,nssv2855807,nssv2858465,nssv2856988,nssv2857072,nssv2857061,nssv2856882,nssv2856969,nssv2857001,nssv2858440,nssv2857039,nssv2856938,nssv2855845,nssv2855853,nssv2857064,nssv2856916,nssv2858427,nssv2856966,nssv2855844,nssv2857030,nssv2856927,nssv2856992,nssv2855804,nssv2858423,nssv2858486,nssv2855852,nssv2858439,nssv2857018,nssv2856897,nssv2855798,nssv2855826,nssv2855781,nssv2856904,nssv2856998,nssv2856954,nssv2856974,nssv2857050,nssv2858430,nssv2856962,nssv2856952,nssv2856987,nssv2858384,nssv2857073,nssv2856961,nssv2857015,nssv2855782,nssv2858402,nssv2858441,nssv2857002,nssv2856958,nssv2855839,nssv2858449,nssv2857029,nssv2857025,nssv2856906,nssv2858492,nssv2855867,nssv2858393,nssv2857058,nssv2856889,nssv2856884,nssv2856894,nssv2858461,nssv2855873,nssv2855780,nssv2855779,nssv2855809,nssv2858476,nssv2857021,nssv2858406,nssv2856955,nssv2856953,nssv2856934,nssv2857040,nssv2857095,nssv2857097,nssv2855848,nssv2855823,nssv2857016,nssv2855835,nssv2856932,nssv2858398,nssv2858433,nssv2858447,nssv2858425,nssv2856892,nssv2856940,nssv2856881,nssv2857022,nssv2857012,nssv2855793,nssv2858475,nssv2857085,nssv2858422,nssv2855861,nssv2857090,nssv2856913,nssv2857052,nssv2856903,nssv2857045,nssv2858437,nssv2855796,nssv2855787,nssv2857035,nssv2858488,nssv2857076,nssv2858401,nssv2855846,nssv2855813,nssv2858392,nssv2857086,nssv2858470,nssv2856982,nssv2856925,nssv2858376,nssv2858462 M 2366 453 0 "" NA06985,NA06986,NA06991,NA06994,NA06995,NA07000,NA07014,NA07019,NA07022,NA07031,NA07034,NA07037,NA07048,NA07051,NA07055,NA07056,NA07346,NA07347,NA07348,NA07349,NA07357,NA07435,NA10831,NA10835,NA10836,NA10838,NA10840,NA10843,NA10845,NA10846,NA10847,NA10850,NA10851,NA10856,NA10857,NA10859,NA10860,NA10863,NA10864,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11843,NA11881,NA11882,NA11892,NA11894,NA11917,NA11918,NA11920,NA11930,NA11992,NA11994,NA11995,NA12043,NA12044,NA12045,NA12056,NA12058,NA12144,NA12145,NA12146,NA12154,NA12155,NA12234,NA12236,NA12239,NA12248,NA12249,NA12264,NA12272,NA12274,NA12275,NA12282,NA12283,NA12286,NA12287,NA12340,NA12341,NA12347,NA12348,NA12375,NA12376,NA12383,NA12386,NA12399,NA12400,NA12485,NA12489,NA12546,NA12708,NA12717,NA12718,NA12740,NA12748,NA12749,NA12750,NA12751,NA12752,NA12753,NA12760,NA12763,NA12766,NA12767,NA12775,NA12776,NA12777,NA12778,NA12801,NA12802,NA12812,NA12813,NA12814,NA12815,NA12817,NA12818,NA12827,NA12828,NA12829,NA12830,NA12842,NA12864,NA12872,NA12874,NA12875,NA12877,NA12878,NA12889,NA12890,NA12891,NA12892,NA18484,NA18485,NA18486,NA18487,NA18488,NA18489,NA18497,NA18498,NA18499,NA18500,NA18501,NA18503,NA18504,NA18506,NA18507,NA18508,NA18509,NA18510,NA18511,NA18516,NA18517,NA18519,NA18522,NA18523,NA18524,NA18532,NA18537,NA18542,NA18545,NA18547,NA18550,NA18552,NA18555,NA18558,NA18562,NA18563,NA18564,NA18566,NA18570,NA18571,NA18572,NA18573,NA18576,NA18577,NA18579,NA18582,NA18592,NA18593,NA18594,NA18603,NA18605,NA18608,NA18609,NA18611,NA18612,NA18620,NA18621,NA18622,NA18624,NA18632,NA18633,NA18635,NA18636,NA18637,NA18852,NA18853,NA18854,NA18855,NA18856,NA18857,NA18859,NA18860,NA18861,NA18862,NA18863,NA18867,NA18868,NA18869,NA18870,NA18871,NA18872,NA18873,NA18874,NA18875,NA18907,NA18908,NA18909,NA18910,NA18911,NA18916,NA18917,NA18923,NA18924,NA18925,NA18930,NA18933,NA18934,NA18935,NA18940,NA18942,NA18945,NA18947,NA18948,NA18949,NA18952,NA18953,NA18956,NA18959,NA18960,NA18961,NA18964,NA18965,NA18966,NA18967,NA18968,NA18969,NA18970,NA18971,NA18972,NA18973,NA18974,NA18975,NA18978,NA18980,NA18981,NA18987,NA18990,NA18991,NA18992,NA18994,NA18995,NA18997,NA18998,NA18999,NA19000,NA19003,NA19005,NA19007,NA19012,NA19092,NA19093,NA19094,NA19095,NA19096,NA19097,NA19098,NA19099,NA19100,NA19101,NA19102,NA19103,NA19108,NA19109,NA19113,NA19114,NA19115,NA19116,NA19117,NA19118,NA19119,NA19120,NA19121,NA19122,NA19123,NA19127,NA19128,NA19129,NA19130,NA19132,NA19137,NA19138,NA19140,NA19141,NA19142,NA19143,NA19144,NA19145,NA19146,NA19147,NA19148,NA19149,NA19150,NA19151,NA19152,NA19153,NA19154,NA19159,NA19160,NA19161,NA19171,NA19173,NA19174,NA19175,NA19177,NA19178,NA19179,NA19180,NA19181,NA19182,NA19183,NA19184,NA19185,NA19186,NA19189,NA19190,NA19191,NA19192,NA19193,NA19194,NA19197,NA19198,NA19199,NA19200,NA19201,NA19202,NA19204,NA19205,NA19206,NA19207,NA19208,NA19209,NA19210,NA19211,NA19214,NA19221,NA19222,NA19223,NA19224,NA19225,NA19235,NA19237,NA19239,NA19240,NA19247,NA19248,NA19249,NA19252,NA19256,NA19257,NA19258,NA21301,NA21302,NA21303,NA21307,NA21309,NA21310,NA21312,NA21313,NA21316,NA21317,NA21344,NA21359,NA21360,NA21361,NA21362,NA21363,NA21365,NA21366,NA21381,NA21382,NA21383,NA21384,NA21386,NA21387,NA21388,NA21389,NA21390,NA21391,NA21399,NA21400,NA21401,NA21403,NA21423,NA21425,NA21438,NA21439,NA21440,NA21441,NA21442,NA21447,NA21453,NA21454,NA21455,NA21475,NA21476,NA21477,NA21478,NA21479,NA21480,NA21485,NA21486,NA21487,NA21488,NA21489,NA21493,NA21494,NA21512,NA21513,NA21514,NA21522,NA21523,NA21524,NA21525,NA21526,NA21580,NA21581,NA21583,NA21599,NA21600,NA21608,NA21614,NA21615,NA21634,NA21635,NA21636,NA21648,NA21686,NA21716,NA21718 dgv202n54 1 25266592 25293098 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545832,nsv545829 M 17421 0 6 "" nsv442830 1 25266637 25335514 CNV loss McCarroll_et_al_2008 18776908 SNP array nssv1617678,nssv1617692,nssv1617710,nssv1617737,nssv1617717,nssv1617640,nssv1617732,nssv1617641,nssv1617739,nssv1617685,nssv1617681,nssv1617644,nssv1617649,nssv1617684,nssv1617745,nssv1617650,nssv1617653,nssv1617698,nssv1617656,nssv1617695,nssv1617708,nssv1617655,nssv1617689,nssv1617635,nssv1617665,nssv1617676,nssv1617728,nssv1617679,nssv1617740,nssv1617652,nssv1617721,nssv1617660,nssv1617705,nssv1617639,nssv1617715,nssv1617645,nssv1617664,nssv1617707,nssv1617733,nssv1617719,nssv1617703,nssv1617731,nssv1617637,nssv1617714,nssv1617696,nssv1617634,nssv1617671,nssv1617651,nssv1617642,nssv1617667,nssv1617687,nssv1617709,nssv1617722,nssv1617633,nssv1617711,nssv1617666,nssv1617730,nssv1617648,nssv1617672,nssv1617699,nssv1617690,nssv1617735,nssv1617668,nssv1617675,nssv1617742,nssv1617701,nssv1617741,nssv1617657,nssv1617729,nssv1617720,nssv1617716,nssv1617706,nssv1617743,nssv1617694,nssv1617638,nssv1617727,nssv1617663,nssv1617662,nssv1617661,nssv1617744,nssv1617688,nssv1617673,nssv1617682,nssv1617697,nssv1617670,nssv1617723,nssv1617712,nssv1617704,nssv1617654,nssv1617674,nssv1617726,nssv1617718,nssv1617683,nssv1617734,nssv1617659,nssv1617693,nssv1617646,nssv1617738,nssv1617643,nssv1617686,nssv1617677,nssv1617700 M 270 0 102 "" NA06985,NA06991,NA06993,NA06994,NA07022,NA07029,NA07034,NA07055,NA07056,NA07357,NA10830,NA10831,NA10835,NA10838,NA10839,NA10851,NA10854,NA10855,NA10856,NA10859,NA10860,NA11829,NA11830,NA11831,NA11832,NA11839,NA11840,NA11882,NA11992,NA11993,NA12003,NA12004,NA12005,NA12006,NA12043,NA12044,NA12056,NA12057,NA12144,NA12145,NA12154,NA12156,NA12234,NA12236,NA12248,NA12707,NA12716,NA12740,NA12751,NA12752,NA12753,NA12761,NA12763,NA12802,NA12815,NA12864,NA12872,NA12873,NA12874,NA12878,NA12891,NA18507,NA18515,NA18516,NA18526,NA18552,NA18571,NA18609,NA18620,NA18636,NA18855,NA18861,NA18863,NA18871,NA18872,NA18940,NA18960,NA18964,NA18994,NA19092,NA19094,NA19102,NA19131,NA19132,NA19140,NA19141,NA19143,NA19154,NA19171,NA19172,NA19173,NA19192,NA19193,NA19194,NA19200,NA19202,NA19203,NA19206,NA19209,NA19211,NA19221,NA19222 esv2764200 1 25266637 25336853 CNV gain+loss Vogler_et_al_2010 21179565 Merging,SNP array essv7005231,essv7005230,essv7005233,essv7005232,essv7005242,essv7005241,essv7005236,essv7005240,essv7005237,essv7005235,essv7005238,essv7005239,essv7005251,essv7005252,essv7005244,essv7005243,essv7005250,essv7005248,essv7005249,essv7005247,essv7005246,essv7005253,essv7005263,essv7005254,essv7005255,essv7005257,essv7005259,essv7005258,essv7005260,essv7005261,essv7005262,essv7005266,essv7005265,essv7005264,essv7005271,essv7005270,essv7005273,essv7005269,essv7005268,essv7005272,essv7005274,essv7005275 M 1109 6 36 "" RW_0017,RW_0018,RW_0023,RW_0025,RW_0042,RW_0049,RW_0053,RW_0064,RW_0068,RW_0072,RW_0079,RW_0088,RW_0106,RW_0123,RW_0129,RW_0132,RW_0152,RW_0158,RW_0168,RW_0171,RW_0173,RW_0190,RW_0209,RW_0216,RW_0220,RW_0227,RW_0241,RW_0253,RW_0254,RW_0310,RW_0325,RW_0502,RW_0513,RW_0550,RW_0554,RW_0564,RW_0568,RW_0571,RW_0587,RW_0615,RW_0624,RW_0664 nsv7409 1 25268841 25301696 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4006 M 9 1 0 "" NA12878 nsv822154 1 25269490 25338941 CNV gain Park_et_al_2010 20364138 Oligo aCGH nssv1431065,nssv1429556 M 31 2 0 "" AK14,AK18 esv2451224 1 25270160 25332671 CNV loss McKernan_et_al_2009 19546169 Sequencing essv5204513 M 1 0 1 "" NA18507 dgv203n54 1 25271785 25320442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545851,nsv545834,nsv545850,nsv545848,nsv545847,nsv545849,nsv545835,nsv545846,nsv545845 M 17421 0 34 "" dgv204n54 1 25271785 25329047 CNV gain+loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545836,nsv545837 M 17421 2 23 "" nsv545843 1 25271785 25367695 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711770,nssv711769 M 17421 0 2 "" nsv482212 1 25272490 25330445 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558573 M 1 1 0 "" KB1 nsv545844 1 25276433 25300841 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711771 M 17421 0 1 "" dgv205n54 1 25279716 25338175 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545855,nsv545858,nsv545857,nsv545856,nsv545852 M 17421 0 7 "" esv29949 1 25282958 25337060 CNV gain Wheeler_et_al_2008 18421352 Oligo aCGH,Sequencing essv84188 M 3 1 0 "" WATSON esv3375696 1 25283574 25287772 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692246 M 185 1 0 "" NA12892 dgv206n54 1 25284602 25316105 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545854,nsv545853 M 17421 0 3 "" dgv32e199 1 25287554 25335401 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array esv2677938,esv2657070 M 1151 0 82 "" HG00096,HG00100,HG00108,HG00116,HG00118,HG00119,HG00122,HG00124,HG00126,HG00127,HG00131,HG00133,HG00136,HG00137,HG00138,HG00140,HG00143,HG00146,HG00148,HG00150,HG00152,HG00155,HG00156,HG00157,HG00158,HG00171,HG00173,HG00174,HG00176,HG00177,HG00179,HG00181,HG00185,HG00188,HG00189,HG00231,HG00236,HG00239,HG00243,HG00249,HG00251,HG00252,HG00253,HG00254,HG00258,HG00261,HG00262,HG00263,HG00265,HG00266,HG00268,HG00272,HG00273,HG00274,HG00275,HG00277,HG00278,HG00281,HG00285,HG00310,HG00313,HG00315,HG00319,HG00321,HG00323,HG00324,HG00327,HG00329,HG00334,HG00335,HG00336,HG00337,HG00338,HG00339,HG00342,HG00343,HG00344,HG00353,HG00366,HG00368,HG00375,HG01334 esv29997 1 25289645 25321967 CNV gain Levy_et_al_2007 17803354 Merging,Oligo aCGH,Sequencing,SNP array essv84236 M 2 1 0 "" HuRef nsv945832 1 25293460 25294559 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1764718,nssv1764686,nssv1764720,nssv1764701,nssv1764644,nssv1764695,nssv1764657,nssv1764685,nssv1764656,nssv1765659,nssv1764717,nssv1764664,nssv1764642,nssv1764704,nssv1765649,nssv1764698,nssv1764719,nssv1764678,nssv1764641,nssv1764703,nssv1765648,nssv1764706,nssv1764716,nssv1764690,nssv1764654,nssv1765650,nssv1764658,nssv1764674,nssv1764651,nssv1764714,nssv1764647,nssv1764639,nssv1764652,nssv1764681,nssv1764722,nssv1764708,nssv1764653,nssv1764679,nssv1764640,nssv1764660,nssv1764646,nssv1765654,nssv1764650,nssv1765656,nssv1764655,nssv1764662,nssv1764649,nssv1764710,nssv1764648,nssv1764700,nssv1764721,nssv1764666,nssv1764645,nssv1764689,nssv1764643,nssv1764702,nssv1764671,nssv1765655,nssv1764707,nssv1764699,nssv1764694,nssv1764697,nssv1764723,nssv1764665,nssv1764680,nssv1764687,nssv1764709,nssv1764683,nssv1765653,nssv1765652,nssv1764684,nssv1764692,nssv1764669,nssv1764711,nssv1764691,nssv1764712,nssv1764715,nssv1765658,nssv1764673,nssv1764688,nssv1764667,nssv1764705,nssv1765657,nssv1764696,nssv1764713,nssv1764659,nssv1764661,nssv1764670,nssv1764675,nssv1765651,nssv1764663,nssv1764677,nssv1764693,nssv1764676,nssv1764668,nssv1764672,nssv1764682 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945833 1 25294559 25338846 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765732,nssv1765685,nssv1765678,nssv1765726,nssv1765666,nssv1765682,nssv1765670,nssv1765714,nssv1765736,nssv1765702,nssv1765679,nssv1765696,nssv1765665,nssv1765717,nssv1765662,nssv1765706,nssv1765664,nssv1765695,nssv1765739,nssv1765722,nssv1765738,nssv1765681,nssv1765674,nssv1765709,nssv1765663,nssv1765727,nssv1765675,nssv1765660,nssv1765676,nssv1765719,nssv1765733,nssv1765724,nssv1765668,nssv1765686,nssv1765673,nssv1765716,nssv1765735,nssv1765713,nssv1765731,nssv1765691,nssv1765677,nssv1765693,nssv1765661,nssv1765711,nssv1765667,nssv1765703,nssv1765671,nssv1765715,nssv1765669,nssv1765697,nssv1765730,nssv1765710,nssv1765672,nssv1765707,nssv1765734,nssv1765701,nssv1765737,nssv1765720,nssv1765721,nssv1765705,nssv1765689,nssv1765699,nssv1765680,nssv1765729,nssv1765725,nssv1765688,nssv1765684,nssv1765690,nssv1765718,nssv1765728,nssv1765683,nssv1765723,nssv1765712,nssv1765694,nssv1765698,nssv1765687,nssv1765700,nssv1765704,nssv1765708,nssv1765692 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv207n54 1 25298555 25320442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545859,nsv545860 M 17421 0 3 "" nsv545861 1 25303147 25320442 CNV gain Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711801 M 17421 1 0 "" dgv208n54 1 25303147 25333196 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545865,nsv545864,nsv545862 M 17421 0 23 "" nsv545863 1 25307714 25320442 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711815,nssv711806,nssv711816,nssv711805,nssv711804,nssv711814,nssv711803,nssv711812,nssv711807,nssv711818,nssv711808,nssv711813,nssv711809,nssv711810,nssv711811,nssv711819,nssv711817 M 17421 0 17 "" dgv209n54 1 25307714 25338308 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545869,nsv545867,nsv545866,nsv545871 M 17421 0 10 "" nsv821617 1 25311314 25360413 CNV loss Sebat_et_al_2004 15273396 ROMA nssv1421385,nssv1421396 M 31 0 2 "" dgv210n54 1 25311762 25333196 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545868,nsv545870 M 17421 0 3 "" nsv834480 1 25312107 25442807 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444251 M 95 1 0 "" nsv499798 1 25329029 25366712 OTHER inversion Kidd_et_al_2010b 21111241 Sequencing nssv585484 M 9 0 0 "" esv996331 1 25362075 25424077 CNV gain Pang_et_al_2010 20482838 Oligo aCGH,Sequencing,SNP array essv3586287 M 3 1 0 "" HuRef esv28510 1 25362120 25425281 CNV gain+loss Conrad_et_al_2009 19812545 Oligo aCGH esv16269,esv10711,esv21345 M 40 23 7 "" NA07045,NA11894,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12749,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19240,NA19257 nsv482037 1 25362250 25420872 CNV gain Schuster_et_al_2010 20164927 Oligo aCGH,Sequencing nssv558398 M 1 1 0 "" KB1 dgv211n54 1 25362506 25368486 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545872,nsv545874,nsv545873 M 17421 0 10 "" nsv945834 1 25362564 25395280 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765758,nssv1765781,nssv1765746,nssv1765740,nssv1765750,nssv1765805,nssv1765812,nssv1765774,nssv1765742,nssv1765763,nssv1765819,nssv1765784,nssv1765816,nssv1765761,nssv1765745,nssv1765768,nssv1765757,nssv1765767,nssv1765818,nssv1765775,nssv1765743,nssv1765762,nssv1765744,nssv1765792,nssv1765754,nssv1765799,nssv1765755,nssv1765772,nssv1765756,nssv1765764,nssv1765811,nssv1765788,nssv1765813,nssv1765798,nssv1765753,nssv1765806,nssv1765814,nssv1765797,nssv1765749,nssv1765794,nssv1765747,nssv1765817,nssv1765815,nssv1765791,nssv1765741,nssv1765807,nssv1765751,nssv1765786,nssv1765759,nssv1765782,nssv1765748,nssv1765793,nssv1765752,nssv1765809,nssv1765810,nssv1765789,nssv1765776,nssv1765765,nssv1765773,nssv1765766,nssv1765808,nssv1765804,nssv1765801,nssv1765777,nssv1765771,nssv1765785,nssv1765779,nssv1765790,nssv1765770,nssv1765800,nssv1765795,nssv1765783,nssv1765796,nssv1765769,nssv1765787,nssv1765803,nssv1765760,nssv1765802,nssv1765780,nssv1765778 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 dgv212n54 1 25364460 25368486 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545875,nsv545878,nsv545877,nsv545876 M 17421 0 6 "" dgv213n54 1 25369117 25372164 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nsv545880,nsv545879 M 17421 0 4 "" esv2762137 1 25384565 25396759 CNV gain Vogler_et_al_2010 21179565 Merging,SNP array essv7005276 M 1109 1 0 "" RW_0117 nsv7479 1 25385246 25417927 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6452 M 9 1 0 "" NA12156 nsv945835 1 25395280 25402866 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765838,nssv1765876,nssv1765898,nssv1765840,nssv1765829,nssv1765863,nssv1765826,nssv1765912,nssv1765899,nssv1765909,nssv1765830,nssv1765858,nssv1765836,nssv1765859,nssv1765825,nssv1765857,nssv1765906,nssv1765861,nssv1765834,nssv1765848,nssv1765839,nssv1765879,nssv1765837,nssv1765896,nssv1765901,nssv1765854,nssv1765823,nssv1765907,nssv1765903,nssv1765885,nssv1765822,nssv1765864,nssv1765835,nssv1765860,nssv1765905,nssv1765847,nssv1765900,nssv1765878,nssv1765833,nssv1765842,nssv1765824,nssv1765872,nssv1765821,nssv1765911,nssv1765827,nssv1765870,nssv1765831,nssv1765820,nssv1765902,nssv1765843,nssv1765832,nssv1765916,nssv1765828,nssv1765892,nssv1765897,nssv1765844,nssv1765873,nssv1765891,nssv1765866,nssv1765886,nssv1765889,nssv1765914,nssv1765904,nssv1765877,nssv1765890,nssv1765852,nssv1765913,nssv1765855,nssv1765888,nssv1765841,nssv1765868,nssv1765867,nssv1765895,nssv1765887,nssv1765874,nssv1765850,nssv1765871,nssv1765851,nssv1765915,nssv1765881,nssv1765875,nssv1765846,nssv1765869,nssv1765845,nssv1765856,nssv1765862,nssv1765849,nssv1765882,nssv1765880,nssv1765865,nssv1765893,nssv1765910,nssv1765853,nssv1765884,nssv1765883,nssv1765908,nssv1765894 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv945837 1 25402866 25425831 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765919,nssv1766661,nssv1765927,nssv1766647,nssv1765935,nssv1766664,nssv1765923,nssv1765939,nssv1765926,nssv1765947,nssv1766670,nssv1766660,nssv1766671,nssv1766653,nssv1766679,nssv1765953,nssv1766672,nssv1766677,nssv1765936,nssv1766666,nssv1766675,nssv1766656,nssv1765925,nssv1766642,nssv1765931,nssv1766659,nssv1765922,nssv1766648,nssv1765920,nssv1766655,nssv1765932,nssv1766663,nssv1766674,nssv1765937,nssv1765930,nssv1765944,nssv1765933,nssv1765940,nssv1765924,nssv1766639,nssv1766678,nssv1765955,nssv1766676,nssv1765954,nssv1765934,nssv1765945,nssv1765928,nssv1766652,nssv1765918,nssv1765946,nssv1765921,nssv1766645,nssv1765929,nssv1766667,nssv1766673,nssv1766665,nssv1766643,nssv1766644,nssv1766650,nssv1765948,nssv1766654,nssv1766640,nssv1765917,nssv1766657,nssv1765952,nssv1766641,nssv1765951,nssv1765949,nssv1766649,nssv1766658,nssv1766646,nssv1765941,nssv1765942,nssv1766662,nssv1766668,nssv1765943,nssv1765938,nssv1766669,nssv1765950,nssv1766651 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv545881 1 25406057 25409635 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711875 M 17421 0 1 "" nsv480324 1 25414671 25414671 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010836 M 9 0 0 "" nsv479344 1 25415625 25415625 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013510 M 9 0 0 "" nsv481117 1 25418160 25418160 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016459 M 9 0 0 "" nsv479861 1 25421056 25421056 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010883 M 9 0 0 "" nsv479805 1 25421117 25421117 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011109 M 9 0 0 "" nsv479901 1 25421352 25421352 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011143 M 9 0 0 "" nsv480379 1 25421715 25421715 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018956 M 9 0 0 "" nsv479196 1 25422255 25422255 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014536 M 9 0 0 "" nsv479194 1 25422343 25422343 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020531 M 9 0 0 "" nsv479086 1 25427718 25427718 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011071 M 9 0 0 "" esv2570786 1 25432032 25433543 CNV deletion McKernan_et_al_2009 19546169 Sequencing essv5375032 M 1 0 1 "" NA18507 nsv480155 1 25433085 25433085 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020275 M 9 0 0 "" nsv474866 1 25433092 25433092 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010859 M 9 1 0 "" NA18956 nsv477052 1 25435038 25435038 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020165 M 9 1 0 "" NA18517 nsv471819 1 25435590 25435590 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012970 M 9 1 0 "" NA18555 nsv479992 1 25435867 25435867 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016889 M 9 0 0 "" nsv479544 1 25436563 25436563 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017923 M 9 0 0 "" nsv480469 1 25436678 25436678 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011202 M 9 0 0 "" nsv480564 1 25436792 25436792 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019950 M 9 0 0 "" nsv480070 1 25441108 25441108 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014701 M 9 0 0 "" nsv474100 1 25444023 25444023 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3015884 M 9 1 0 "" NA12156 nsv479765 1 25445920 25445920 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011014 M 9 0 0 "" nsv480393 1 25446169 25446169 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010911 M 9 0 0 "" nsv474039 1 25446233 25446233 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019468 M 9 1 0 "" NA12156 nsv479656 1 25448981 25448981 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016917 M 9 0 0 "" dgv71e59 1 25508774 25509072 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing esv3445747,esv3413689 M 185 2 0 "" NA12891,NA12892 esv3450111 1 25529201 25529584 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8652078 M 185 1 0 "" NA19240 esv3310450 1 25529504 25529504 CNV novel sequence insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7843645,essv7843644,essv7843646 M 185 3 0 "" NA19238,NA19239,NA19240 esv3381307 1 25529505 25529505 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8653233,essv8653234,essv8653235 M 185 3 0 "" NA19238,NA19239,NA19240 nsv480715 1 25565393 25565393 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016389 M 9 0 0 "" nsv477742 1 25569518 25569518 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019300 M 9 1 0 "" NA18517 nsv479294 1 25569659 25569659 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3018335 M 9 0 0 "" nsv480818 1 25570427 25570427 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010744 M 9 0 0 "" nsv480597 1 25572996 25572996 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017202 M 9 0 0 "" esv2656499 1 25573853 25581550 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6229162,essv5974609,essv6239852 M 1151 0 3 "" NA18597,NA18618,NA19080 nsv478983 1 25576566 25576566 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017876 M 9 0 0 "" nsv480023 1 25577513 25577513 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011670 M 9 0 0 "" nsv477804 1 25578591 25578591 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013432 M 9 1 0 "" NA18517 nsv481318 1 25578745 25578745 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013716 M 9 0 0 "" nsv480169 1 25579934 25579934 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019987 M 9 0 0 "" nsv479385 1 25580183 25580183 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014935 M 9 0 0 "" nsv480202 1 25580420 25580420 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016088 M 9 0 0 "" nsv476293 1 25581568 25581568 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016128 M 9 1 0 "" NA12878 nsv475325 1 25581821 25581821 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012172 M 9 1 0 "" NA19240 nsv481307 1 25583848 25583848 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016750 M 9 0 0 "" nsv480669 1 25584109 25584109 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011149 M 9 0 0 "" nsv480032 1 25584383 25584383 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3020469 M 9 0 0 "" nsv475110 1 25587063 25587063 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019725 M 9 1 0 "" NA19240 nsv473914 1 25589401 25589401 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3016731 M 9 1 0 "" NA12156 nsv480591 1 25589792 25589792 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3019801 M 9 0 0 "" nsv481331 1 25590340 25590340 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3017157 M 9 0 0 "" nsv478997 1 25593146 25593146 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3011964 M 9 0 0 "" nsv480055 1 25594224 25594224 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3014238 M 9 0 0 "" nsv479415 1 25597697 25597697 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3010782 M 9 0 0 "" nsv481294 1 25598426 25598426 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013438 M 9 0 0 "" esv3358130 1 25664262 25664293 CNV insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv7863684 M 185 1 0 "" NA12005 esv3357351 1 25715074 25715872 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692258 M 185 1 0 "" NA19239 nsv834491 1 25726411 25914117 CNV loss Wong_et_al_2007 17160897 BAC aCGH nssv1444262,nssv1444273 M 95 0 2 "" nsv545882 1 25740970 25795606 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv711876 M 17421 0 1 "" nsv947417 1 25754993 25760641 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv2759055 M 97 1 0 "" HGDP00998 nsv819900 1 25762451 25766346 CNV gain Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419585 M 2 1 0 "" AK1 nsv950335 1 25767010 25769809 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997100 M 1 0 1 "" BILGI_BIOE esv2745619 1 25767578 25768517 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6836199,essv6843954,essv6785003 M 96 0 3 "" SSM011,SSM069,SSM083 esv2116011 1 25767585 25768451 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4648407 M 1 0 1 "" NA18507 esv2671844 1 25767611 25768058 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6302272,essv6199445,essv6052212,essv5823134,essv6169379,essv6128223,essv6244162,essv6104479,essv6500767,essv6514627,essv6451449,essv5766028,essv5899214,essv6152211,essv5748706,essv6488467,essv6336565,essv5809589,essv6438205,essv6419141,essv5509131,essv6152273,essv5949810,essv5663711,essv6542553,essv6511818,essv5923415,essv5971021,essv6022301,essv5597764,essv5507160,essv5900991,essv6580691,essv6356210,essv5944376,essv6463989,essv5931704,essv6501573,essv5662503,essv5600099,essv5549242,essv5578674,essv5534911,essv6305917,essv6001839,essv6039679 M 1151 0 46 "" HG00149,HG00182,HG00242,HG00265,HG00366,HG00690,HG00704,HG00708,HG01112,HG01134,HG01137,HG01148,HG01353,HG01366,HG01389,HG01518,HG01519,NA12272,NA18606,NA18615,NA18618,NA18870,NA18963,NA19010,NA19072,NA19082,NA19084,NA19331,NA19355,NA19373,NA19385,NA19397,NA19431,NA19452,NA19717,NA19729,NA19750,NA19756,NA19783,NA20294,NA20344,NA20356,NA20581,NA20755,NA20757,NA20778 esv3381476 1 25768374 25769572 CNV duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Digital array,Oligo aCGH,PCR,Sequencing essv8692259 M 185 1 0 "" NA19239 esv2745630 1 25768549 25769152 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6769533 M 96 0 1 "" SSM065 nsv460884 1 25778482 25891593 CNV loss Itsara_et_al_2009 19166990 Oligo aCGH,SNP array nssv537367 M 1557 0 1 "" HGDP01023 nsv545883 1 25778482 25891593 CNV loss Cooper_et_al_2011 21841781 Oligo aCGH,SNP array nssv1173801 M 17421 0 1 "" HGDP01023 nsv7490 1 25797857 25843537 CNV deletion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv6462 M 9 0 1 "" NA12156 nsv950337 1 25800110 25819709 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997101 M 1 0 1 "" BILGI_BIOE dgv14e201 1 25807980 25808713 CNV deletion Wong_et_al_2012b 23290073 Sequencing esv2741631,esv2745641,esv2743347 M 96 0 39 "" SSM003,SSM008,SSM013,SSM014,SSM015,SSM017,SSM018,SSM020,SSM021,SSM022,SSM023,SSM024,SSM025,SSM026,SSM028,SSM029,SSM031,SSM032,SSM034,SSM037,SSM039,SSM040,SSM042,SSM043,SSM047,SSM065,SSM066,SSM067,SSM068,SSM069,SSM070,SSM072,SSM073,SSM079,SSM080,SSM081,SSM084,SSM085,SSM087 esv2353706 1 25808109 25808558 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4547374 M 1 0 1 "" NA18507 esv2742604 1 25808145 25808574 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6892329 M 96 0 1 "" SSM098 esv2745652 1 25808200 25808339 CNV deletion Wong_et_al_2012b 23290073 Sequencing essv6675211 M 96 0 1 "" SSM032 esv1998326 1 25822288 25822959 CNV deletion Bentley_et_al_2008 18987734 Sequencing essv4882212 M 1 0 1 "" NA18507 esv2671091 1 25822448 25822774 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv5712234,essv5784399,essv5541892,essv5754214,essv5956744,essv6355477,essv5833127,essv5485353,essv5594137,essv6277930,essv6289516,essv5597437,essv5769786,essv5622593,essv5422356,essv6523331,essv5717068,essv5769662,essv6245172,essv6065592,essv6079568,essv6394726,essv5397231,essv6500975,essv6484123,essv6069253,essv6231927,essv5637828,essv5884073,essv5587061,essv6151447,essv6412534,essv5877205,essv6126063,essv6339472,essv6516520,essv6061331,essv6385446,essv5852850,essv6333831,essv6008796,essv5440775,essv6368133,essv6506113,essv5916659,essv6001882,essv6504522,essv6361928,essv5588725,essv5578526,essv6403543,essv6339323,essv6251633,essv5664671,essv6301192,essv5954357,essv5999992,essv5857195 M 1151 0 58 "" HG01101,NA18498,NA18502,NA18508,NA18517,NA18853,NA18871,NA18873,NA18874,NA18907,NA18908,NA18910,NA18912,NA18916,NA19099,NA19108,NA19129,NA19130,NA19189,NA19198,NA19257,NA19319,NA19332,NA19346,NA19360,NA19371,NA19372,NA19373,NA19395,NA19396,NA19397,NA19398,NA19404,NA19428,NA19429,NA19436,NA19437,NA19440,NA19445,NA19448,NA19452,NA19453,NA19462,NA19471,NA19654,NA19703,NA19704,NA19707,NA19712,NA19713,NA19819,NA19901,NA20127,NA20281,NA20287,NA20291,NA20294,NA20346 nsv834502 1 25834281 25987428 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444284 M 95 1 0 "" nsv822165 1 25836324 25836797 CNV loss Park_et_al_2010 20364138 Oligo aCGH nssv1423950 M 31 0 1 "" NA18582 nsv945838 1 25887321 25891977 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1766694,nssv1764333,nssv1766684,nssv1766710,nssv1764378,nssv1764390,nssv1764372,nssv1764335,nssv1764373,nssv1764364,nssv1766686,nssv1764332,nssv1766698,nssv1764354,nssv1766690,nssv1764349,nssv1764375,nssv1764379,nssv1766682,nssv1764358,nssv1766699,nssv1764384,nssv1766689,nssv1764351,nssv1764381,nssv1764385,nssv1766688,nssv1764356,nssv1766697,nssv1764353,nssv1766683,nssv1764346,nssv1766696,nssv1764388,nssv1764380,nssv1764334,nssv1766695,nssv1764355,nssv1766685,nssv1764342,nssv1764377,nssv1766701,nssv1766693,nssv1766711,nssv1766691,nssv1766680,nssv1766687,nssv1764345,nssv1766681,nssv1764386,nssv1764376,nssv1764337,nssv1764374,nssv1764357,nssv1766692,nssv1764360,nssv1764370,nssv1764362,nssv1766707,nssv1764391,nssv1764336,nssv1764340,nssv1764339,nssv1766702,nssv1764365,nssv1766715,nssv1764371,nssv1766703,nssv1764338,nssv1766713,nssv1764389,nssv1764383,nssv1766708,nssv1764366,nssv1764343,nssv1764361,nssv1764367,nssv1764369,nssv1766704,nssv1766700,nssv1764387,nssv1764363,nssv1766709,nssv1764352,nssv1764344,nssv1766705,nssv1764348,nssv1766714,nssv1764368,nssv1764382,nssv1764341,nssv1764359,nssv1766706,nssv1766712,nssv1764350,nssv1764347,nssv1764331 M 97 10 0 "" HGDP00456,HGDP00521,HGDP00542,HGDP00665,HGDP00778,HGDP00927,HGDP00998,HGDP01029,HGDP01284,HGDP01307 nsv834513 1 25922980 26087385 CNV gain Wong_et_al_2007 17160897 BAC aCGH nssv1444296 M 95 1 0 "" esv2664402 1 25941916 25942609 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6570918,essv5711041,essv6017624,essv5900309,essv6228959,essv6201025,essv6073791,essv5878810,essv6179240,essv5411285,essv6285818,essv5889028,essv5577635,essv6321765,essv5897977,essv5958621 M 1151 0 16 "" NA18486,NA18504,NA18505,NA18856,NA19138,NA19152,NA19204,NA19238,NA19240,NA19381,NA19382,NA19399,NA19834,NA19909,NA19917,NA20348 esv2671144 1 25947592 25947920 CNV deletion 1000_Genomes_Consortium_Phase_1 23128226 Merging,Oligo aCGH,PCR,Sequencing,SNP array essv6052305,essv5676336,essv6303005,essv6466004,essv5872269,essv5713581,essv5706561,essv5750407,essv6500308,essv5802954,essv5626186,essv6014836,essv6419842,essv6323824,essv5625271,essv6009263,essv5433387,essv6020522,essv5861714,essv5574179,essv6077443 M 1151 0 21 "" NA11892,NA11893,NA12286,NA12546,NA12748,NA12829,NA12842,NA19256,NA20513,NA20514,NA20759,NA20761,NA20769,NA20790,NA20795,NA20802,NA20806,NA20812,NA20816,NA20818,NA20819 nsv472827 1 25951264 25951264 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3013002 M 9 1 0 "" NA18555 nsv7501 1 25986982 26020423 CNV insertion Kidd_et_al_2008 18451855 FISH,Multiple complete digestion,Oligo aCGH,Sequencing nssv4016 M 9 1 0 "" NA12878 nsv950338 1 26031610 26047909 CNV deletion Dogan_et_al_2014 24416366 Sequencing nssv2997102 M 1 0 1 "" BILGI_BIOE nsv508678 1 26051066 26106136 CNV deletion Teague_et_al_2010 20534489 BAC aCGH,Oligo aCGH,Optical mapping,Sequencing nssv622761 M 4 0 1 "" NA18994 nsv478347 1 26076300 26076300 CNV novel sequence insertion Kidd_et_al_2010 20440878 Oligo aCGH,Sequencing nssv3012956 M 9 1 0 "" NA18507 nsv950339 1 26121910 26127709 CNV duplication Dogan_et_al_2014 24416366 Sequencing nssv2997103 M 1 1 0 "" BILGI_BIOE nsv511129 1 26123610 26141503 CNV loss Arlt_et_al_2011 21212237 Sequencing,SNP array nssv626365 M 1 0 1 "" 1 nsv819393 1 26123804 26124506 CNV loss Kim_et_al_2009 19587683 Oligo aCGH,Sequencing,SNP array nssv1419064 M 2 0 1 "" AK1 nsv945839 1 26126760 26129641 CNV duplication Sudmant_et_al_2013 23825009 Oligo aCGH,Sequencing nssv1765395,nssv1765372,nssv1764394,nssv1764413,nssv1764411,nssv1765385,nssv1764410,nssv1765348,nssv1764404,nssv1765369,nssv1765396,nssv1765359,nssv1764406,nssv1765378,nssv1764409,nssv1765383,nssv1764395,nssv1765406,nssv1764400,nssv1765387,nssv1765401,nssv1765384,nssv1765402,nssv1765375,nssv1765398,nssv1765352,nssv1764407,nssv1765400,nssv1765397,nssv1765349,nssv1764408,nssv1765374,nssv1765394,nssv1765412