variantaccession chr start end varianttype variantsubtype reference pubmedid method platform mergedvariants supportingvariants mergedorsample frequency samplesize observedgains observedlosses cohortdescription genes samples nssv14781 1 1 72052 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA18860 nssv14784 1 1 77329 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA18975 nssv14768 1 1 78006 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA12155 nssv14790 1 1 78006 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA19221 nssv1529569 1 1 346144 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870619 "" S 6533 1 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC100288778,LOC729737,OR4F5,WASH7P SP58241 nsv870619 1 1 346144 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv1n71 nssv1529569 S 6533 1 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC100288778,LOC729737,OR4F5,WASH7P SP58241 nssv1601260 1 1 707348 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871113 "" S 6533 1 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC100288778,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5,WASH7P IS30771 nssv1601261 1 1 707348 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871113 "" S 6533 1 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC100288778,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5,WASH7P IS41043 nsv871113 1 1 707348 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv2n71 nssv1601260,nssv1601261 M 6533 2 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC100288778,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5,WASH7P IS30771,IS41043 essv10172 1 377 167280 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv1e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA19130 essv11114 1 377 167280 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv1e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA19211 essv14783 1 377 167280 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv1e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA19159 essv15097 1 377 167280 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv1e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA19129 essv15821 1 377 167280 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv1e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA19223 essv3863 1 377 167280 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv1e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA18994 essv9162 1 377 167280 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv1e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA18860 nssv450130 1 377 167280 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428112 "" S 62 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P HGDP01088 essv7224 1 377 802347 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv3e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,FAM41C,LINC00115,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC100288778,LOC643837,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5,WASH7P NA18547 esv595 1 377 1008567 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent + Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv3e1 "" S 271 AGRN,C1orf159,C1orf170,FAM138A,FAM138F,FAM41C,HES4,ISG15,KLHL17,LINC00115,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC100288778,LOC643837,LOC729737,NOC2L,OR4F16,OR4F29,OR4F3,OR4F5,PLEKHN1,RNF223,SAMD11,WASH7P essv56500 1 499 69067 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA12776 essv77852 1 499 69452 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA06985 essv82243 1 499 69727 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA19114 essv48828 1 499 70515 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA07037 essv36569 1 499 71094 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA11894 essv78929 1 499 71161 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA12749 essv75636 1 499 71311 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA12414 essv61349 1 499 71692 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA12239 essv47291 1 499 76593 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA18861 essv53480 1 499 76593 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA18508 essv59014 1 499 76593 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA19108 essv55201 1 499 76868 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA19099 essv43633 1 499 76959 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA18909 essv44330 1 499 76959 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA12489 essv42378 1 499 77473 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA18505 essv68486 1 499 77708 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA18858 essv57788 1 499 79026 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA11993 essv66858 1 499 80303 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA12828 essv83994 1 499 80303 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA19190 essv33662 1 499 81421 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA19147 essv36301 1 499 81421 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA18907 essv45662 1 499 81421 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA19129 essv65410 1 499 81454 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA19240 esv17542 1 499 81454 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27265 essv47291,essv36301,essv77852,essv43633,essv48828,essv55201,essv36569,essv59014,essv82243,essv45662,essv33662,essv57788,essv83994,essv65410,essv75141,essv61349,essv75636,essv44330,essv78929,essv56500,essv66858,essv63480,essv42378,essv53480,essv76745,essv68486 M 451 26 0 FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA06985,NA07037,NA11894,NA11993,NA12004,NA12239,NA12414,NA12489,NA12749,NA12776,NA12828,NA15510,NA18505,NA18508,NA18511,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19240 essv63480 1 499 81876 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA15510 essv75141 1 499 82255 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,OR4F5,WASH7P NA12004 essv34520 1 499 167231 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16041 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA18502 essv52357 1 499 167231 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16041 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA12006 essv60177 1 499 167231 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16041 "" S 451 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA18523 esv16041 1 499 167231 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27265 essv52357,essv34520,essv60177 M 451 3 0 FAM138A,FAM138F,LOC100288778,LOC729737,OR4F5,WASH7P NA12006,NA18502,NA18523 nssv1534257 1 10004 346144 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871760 "" S 6533 1 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F5,WASH7P MS11497 nsv871760 1 10004 346144 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv1n71 nssv1534257 S 6533 1 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F5,WASH7P MS11497 nssv1567886 1 10004 595956 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870710 "" S 6533 1 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5,WASH7P IS31169 nsv870710 1 10004 595956 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv3n71 nssv1567886 S 6533 1 0 FAM138A,FAM138F,LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5,WASH7P IS31169 nssv14787 1 10927 18440 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. WASH7P NA19132 nssv14773 1 10927 25846 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,WASH7P NA18504 nssv14771 1 11274 72052 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,OR4F5,WASH7P NA12872 nssv14770 1 11692 78006 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,OR4F5,WASH7P NA12802 nssv14783 1 17608 20527 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. WASH7P NA18972 nssv649780 1 17843 167209 CNV Loss Locke et al 2006 16826518 BAC_aCGH Eichler Segmental Duplication BAC array nsv469759 "" M 265 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,LOC729737,OR4F5,WASH7P nssv550435 1 17844 167209 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471591 "" S 48 0 1 FAM138A,FAM138F,LOC729737,OR4F5,WASH7P NA10492 nssv550436 1 17844 167209 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471591 "" S 48 0 1 FAM138A,FAM138F,LOC729737,OR4F5,WASH7P NA10970 nssv550437 1 17844 167209 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471591 "" S 48 0 1 FAM138A,FAM138F,LOC729737,OR4F5,WASH7P NA10971 nssv550438 1 17844 167209 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471591 "" S 48 0 1 FAM138A,FAM138F,LOC729737,OR4F5,WASH7P NA17051 nssv18117 1 20153 80489 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM138A,FAM138F,OR4F5 NA19132 nssv14766 1 27752 72052 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA10863 nssv14775 1 27752 72052 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA18537 nssv14791 1 27752 72052 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA19240 nssv14780 1 27752 77329 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA18853 nssv14789 1 27752 77329 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA19173 nssv18103 1 27752 77329 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA18504 nssv14788 1 27752 96257 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA19144 nssv14762 1 27752 117193 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA07029 nssv1513753 1 28663 555561 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871393 "" S 6533 1 0 LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5 SP55842 nsv871393 1 28663 555561 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv3n71 nssv1513753 S 6533 1 0 LOC100132062,LOC100132287,LOC100133331,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5 SP55842 essv76745 1 30264 77296 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17542 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA18511 nssv14776 1 32536 77329 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA18552 nssv18113 1 32536 94167 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA18972 nssv14786 1 44260 59440 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA19007 nssv467079 1 45257 76166 CNV Loss Conrad et al 2006 16327808 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv437198 "" S 60 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA19208 nssv14763 1 48867 59440 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA07048 nssv467740 1 55871 68941 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437859 "" S 269 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA12155 nssv468851 1 55871 68941 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437859 "" S 269 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA10831 nssv469962 1 55871 68941 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437859 "" S 269 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA12044 nssv470979 1 55871 68941 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437859 "" S 269 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA10857 nssv471090 1 55871 68941 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437859 "" S 269 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA18912 nssv471201 1 55871 68941 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437859 "" S 269 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA18914 nssv471312 1 55871 68941 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437859 "" S 269 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA19207 nssv471423 1 55871 68941 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437859 "" S 269 0 1 Samples from several populations that are part of the HapMap project. OR4F5 NA19208 nssv628442 1 58360 60490 CNV Complex Campbell et al 2011 21397061 Oligo_aCGH Agilent Eichler Human CNP 180K v3.0 + Agilent Eichler Human CNP 180K v2.1 nsv514929 "" S 1414 0 0 OR4F5 nssv1592572 1 59415 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871664 "" S 6533 1 0 FAM41C,LINC00115,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC643837,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5 IS39243 nsv871664 1 59415 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv2n71 nssv1592572 S 6533 1 0 FAM41C,LINC00115,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC643837,LOC729737,OR4F16,OR4F29,OR4F3,OR4F5 IS39243 nssv18093 1 59870 77329 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. OR4F5 NA07048 essv72505 1 72568 82025 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19430 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19225 esv19430 1 72568 82025 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27265 essv72505 S 451 1 0 "" NA19225 essv38590 1 75704 81454 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19257 esv19525 1 75704 81830 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27265 essv38590,essv49960 M 451 2 0 "" NA18517,NA19257 nssv14764 1 76641 78006 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA10839 nssv14774 1 76641 78006 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18517 nssv21423 1 76641 78006 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA07048 nssv14772 1 76641 80489 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18502 nssv14785 1 76641 80489 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18980 nssv14777 1 76641 90508 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18563 nssv14782 1 76641 94167 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7879 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18942 essv75529 1 77296 79026 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14423 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12414 esv14423 1 77296 79026 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27265 essv75529 S 451 0 1 "" NA12414 essv49960 1 77296 81830 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18517 essv76801 1 77309 98984 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15038 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18511 esv15038 1 77309 98984 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27265 essv76801 S 451 0 1 "" NA18511 essv12864 1 77822 993492 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv3e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AGRN,C1orf170,FAM41C,HES4,ISG15,KLHL17,LINC00115,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC643837,LOC729737,NOC2L,OR4F16,OR4F29,OR4F3,PLEKHN1,SAMD11 NA18502 essv6104 1 77822 993492 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv3e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AGRN,C1orf170,FAM41C,HES4,ISG15,KLHL17,LINC00115,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC643837,LOC729737,NOC2L,OR4F16,OR4F29,OR4F3,PLEKHN1,SAMD11 NA18573 essv606 1 77822 1008567 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv3e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AGRN,C1orf159,C1orf170,FAM41C,HES4,ISG15,KLHL17,LINC00115,LOC100130417,LOC100132062,LOC100132287,LOC100133331,LOC100288069,LOC643837,LOC729737,NOC2L,OR4F16,OR4F29,OR4F3,PLEKHN1,RNF223,SAMD11 NA18947 nssv179750 1 78053 79016 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv161172 "" M 24 "" essv3586083 1 126044 127189 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv991724 "" S 3 0 1 LOC729737 HuRef essv44049 1 126044 127674 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20178 "" S 451 0 1 Samples from several populations that are part of the HapMap project. LOC729737 NA18909 esv20178 1 126044 127674 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27265 essv44049,essv57522,essv69266,essv73333 M 451 0 4 LOC729737 NA11993,NA12044,NA12156,NA18909 essv69266 1 126089 127189 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20178 "" S 451 0 1 Samples from several populations that are part of the HapMap project. LOC729737 NA12044 essv57522 1 126089 127674 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20178 "" S 451 0 1 Samples from several populations that are part of the HapMap project. LOC729737 NA11993 essv73333 1 126299 127189 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20178 "" S 451 0 1 Samples from several populations that are part of the HapMap project. LOC729737 NA12156 nssv14779 1 166125 167223 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8990 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18572 nssv1533163 1 227744 707348 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870793 "" S 6533 1 0 LOC100132062,LOC100132287,LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 MS11032 essv19171 1 307583 461231 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv4e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12865 essv19438 1 307583 461231 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv4e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA11840 essv2061 1 307583 461231 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv4e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18949 essv6302 1 307583 461231 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv4e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18609 nssv450575 1 307583 461231 CNV Loss Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428223 "" S 62 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 HGDP00984 nssv450686 1 307583 461231 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428223 "" S 62 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18498 essv13070 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18852 essv13159 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA19102 essv14061 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18861 essv14749 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA19159 essv15368 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18862 essv15391 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA19203 essv16293 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA19161 essv16896 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA19205 essv1788 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18997 essv18422 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12249 essv18731 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12874 essv18928 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12005 essv20585 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA07056 essv21138 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12815 essv21228 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA11830 essv21797 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12239 essv22385 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12875 essv22870 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12760 essv2576 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18990 essv275 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18978 essv3049 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18981 essv3078 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18969 essv398 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18971 essv42 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18991 essv4432 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18573 essv479 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18952 essv4859 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18540 essv4965 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18637 essv5049 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18576 essv5209 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18611 essv5240 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18624 essv5344 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18563 essv563 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18998 essv5822 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18566 essv6021 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18571 essv6152 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18532 essv6604 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18621 essv6730 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18562 essv6816 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18579 essv7127 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18537 essv7529 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18545 essv8373 1 307583 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv5e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18858 essv66767 1 307633 317900 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15703 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331 NA12828 esv15703 1 307633 317900 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv66767 S 451 1 0 LOC100132062,LOC100132287,LOC100133331 NA12828 essv34559 1 307633 327332 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10639 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331 NA18502 essv52614 1 307633 341778 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10639 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331 NA12006 esv10639 1 307633 341778 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv52614,essv34559 M 451 2 0 LOC100132062,LOC100132287,LOC100133331 NA12006,NA18502 essv60536 1 307633 461200 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17876 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18523 esv17876 1 307633 461200 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv72246,essv40687,essv60536 M 451 3 0 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12878,NA18523,NA19225 nssv1441517 1 307737 415038 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 1 0 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1441518 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1441629 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1442628 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1443739 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1444850 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1445961 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1447072 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1448183 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1449294 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv1450405 1 307737 415038 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829647 "" S 95 0 1 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv547887 1 308002 460787 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471518 "" S 3 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv547888 1 308002 460787 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471518 "" S 3 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv547890 1 308002 460787 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471518 "" S 3 LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 nssv463223 1 311662 428408 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) nsv433342 "" S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18555 nsv433342 1 311662 428408 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) dgv1n14 nssv463223 S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA18555 nssv463225 1 311662 456464 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) nsv433344 "" S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12156 nssv463226 1 311662 456464 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) nsv433345 "" S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA19240 nsv433344 1 311662 456464 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) dgv1n14 nssv463225 S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA12156 nsv433345 1 311662 456464 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) dgv1n14 nssv463226 S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331,OR4F16,OR4F29,OR4F3 NA19240 essv57028 1 316165 317035 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv9873 "" S 451 0 1 Samples from several populations that are part of the HapMap project. LOC100132062,LOC100132287,LOC100133331 NA11993 esv9873 1 316165 317035 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv57028 S 451 0 1 LOC100132062,LOC100132287,LOC100133331 NA11993 nssv18109 1 337955 449985 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18572 essv42809 1 340394 393975 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13800 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18909 esv13800 1 340394 393975 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv42809,essv54600,essv82906,essv44378,essv41805,essv77117 M 451 6 0 OR4F16,OR4F29,OR4F3 NA12489,NA18505,NA18511,NA18909,NA19099,NA19190 essv40687 1 340868 461200 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17876 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12878 essv82906 1 341457 393762 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13800 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19190 essv77117 1 342621 393659 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13800 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18511 essv41805 1 342795 393914 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13800 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18505 essv54600 1 342795 393914 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13800 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19099 essv72246 1 347520 461200 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17876 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19225 essv44378 1 348855 393555 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13800 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12489 nssv18111 1 351318 351622 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18860 nssv21433 1 351318 351622 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18504 nssv14765 1 353740 449985 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10847 nssv628443 1 356912 358042 CNV Complex Campbell et al 2011 21397061 Oligo_aCGH Agilent Eichler Human CNP 180K v3.0 + Agilent Eichler Human CNP 180K v2.1 nsv514924 "" S 1414 0 0 OR4F16,OR4F29,OR4F3 nssv18105 1 385109 386286 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18537 nssv18094 1 385179 386401 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA10839 nssv18119 1 385179 386401 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA19173 nssv1570906 1 389687 595956 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871303 "" S 6533 0 1 "" IS32329 essv82368 1 393790 450877 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19114 essv76138 1 393975 461200 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12414 esv14573 1 393975 461200 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv59180,essv82368,essv37554,essv57736,essv52746,essv61704,essv39730,essv76138,essv79246,essv56490,essv68520 M 451 0 11 "" NA11894,NA11993,NA12006,NA12239,NA12287,NA12414,NA12749,NA12776,NA18858,NA19108,NA19114 nssv21449 1 394422 405992 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA19173 nssv18096 1 396116 451683 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA10863 essv56490 1 405320 450423 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12776 essv79246 1 405706 451143 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12749 essv39730 1 405969 451143 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12287 essv61704 1 406090 451707 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12239 essv52746 1 406517 451238 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12006 essv37554 1 406577 451394 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11894 essv68520 1 406757 450607 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18858 essv57736 1 407327 461200 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11993 essv59180 1 414308 461200 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14573 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19108 essv3586250 1 426592 450877 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv994970 "" S 3 0 1 "" HuRef essv55129 1 427205 458507 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16611 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19099 esv16611 1 427205 458507 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv55129 S 451 1 0 "" NA19099 nssv21443 1 433725 440967 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18972 essv62546 1 434201 439099 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20401 "" S 451 1 0 "" NA15510 esv20401 1 434201 439099 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv62546 S 451 1 0 "" NA15510 essv63424 1 439149 440374 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15785 "" S 451 0 1 "" NA15510 essv43226 1 439149 440444 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15785 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18909 esv15785 1 439149 440444 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv43226,essv70845,essv63424,essv76744,essv50095 M 451 0 5 "" NA15510,NA18511,NA18517,NA18909,NA18916 essv50095 1 439719 440444 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15785 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18517 essv70845 1 439719 440444 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15785 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18916 essv76744 1 439719 440444 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15785 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18511 nssv1512543 1 449226 615226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871937 "" S 6533 0 1 OR4F16,OR4F29,OR4F3 SP55553 nssv1514850 1 449226 615226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871937 "" S 6533 0 1 OR4F16,OR4F29,OR4F3 SP56086 nsv871937 1 449226 615226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv4n71 nssv1512543,nssv1514850 M 6533 0 2 OR4F16,OR4F29,OR4F3 SP55553,SP56086 nssv18116 1 450092 454792 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA19007 nssv24614 1 450092 459291 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18972 essv3586709 1 450924 461231 CNV Gain Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv1004360 "" S 3 1 0 "" HuRef essv52394 1 451278 461200 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20387 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12006 esv20387 1 451278 461200 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv52394 S 451 1 0 "" NA12006 nssv1513603 1 456464 615226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870581 "" S 6533 0 1 OR4F16,OR4F29,OR4F3 SP55804 nsv870581 1 456464 615226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv4n71 nssv1513603 S 6533 0 1 OR4F16,OR4F29,OR4F3 SP55804 nssv1513690 1 456464 617622 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871459 "" S 6533 1 0 OR4F16,OR4F29,OR4F3 SP55829 essv54463 1 458602 461200 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13367 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19099 esv13367 1 458602 461200 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27883 essv54463 S 451 0 1 "" NA19099 essv10308 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18506 essv10404 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19222 essv10692 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18855 essv10773 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18523 essv10859 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18871 essv10930 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19209 essv11047 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19143 essv11117 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19211 essv11286 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19204 essv11537 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19173 essv11817 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18521 essv11842 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19221 essv11947 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18502 essv1195 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18951 essv12160 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19101 essv12294 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19138 essv1234 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18995 essv12450 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19207 essv12580 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19098 essv12660 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18500 essv12764 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18914 essv12783 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19120 essv13036 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18859 essv13540 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19160 essv13620 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19127 essv13656 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19119 essv13768 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19153 essv13871 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18854 essv1405 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19007 essv14172 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19140 essv14290 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19194 essv14380 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18507 essv14424 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19201 essv14521 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19202 essv15140 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19129 essv15246 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19094 essv15488 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18505 essv15555 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19137 essv15621 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18912 essv15724 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19131 essv15885 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19223 essv16081 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18501 essv16119 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19100 essv16405 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19139 essv16677 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19142 essv17097 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19172 essv17122 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19171 essv17510 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12762 essv18129 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA11993 essv18181 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12057 essv18284 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10846 essv18354 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA11994 essv18622 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12234 essv1893 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18976 essv19212 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10838 essv1953 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18959 essv19599 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12155 essv19771 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10835 essv19976 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12813 essv20202 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA11832 essv20297 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12144 essv20899 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12801 essv21244 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10855 essv21382 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12740 essv21709 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12248 essv21964 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA11995 essv2208 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18960 essv22119 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10857 essv22228 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12044 essv22335 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA06985 essv22644 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12752 essv22778 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA07019 essv22837 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12004 essv2295 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18966 essv23021 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12812 essv23137 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12891 essv2348 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18940 essv23485 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA07034 essv23690 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10863 essv23929 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12814 essv24485 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12056 essv24509 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12802 essv24729 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA11829 essv24808 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10860 essv24873 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA07000 essv2682 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18967 essv3219 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18974 essv3733 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18961 essv3867 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18994 essv3975 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18970 essv4036 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18635 essv4148 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18555 essv4291 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18603 essv4690 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18622 essv4875 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18561 essv5112 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18577 essv5438 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18632 essv5713 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18593 essv5926 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18550 essv6244 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18636 essv6689 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18608 essv680 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18975 essv7384 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18623 essv7731 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18633 essv7831 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18558 essv799 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18956 essv8230 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19116 essv8274 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19103 essv8485 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18516 essv852 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19000 essv8788 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18508 essv8925 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19200 essv9009 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19132 essv9122 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18860 essv9198 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19128 essv9346 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18853 essv9445 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19208 essv9715 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18913 essv9811 1 511232 632895 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv6e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18863 essv51842 1 511276 512394 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18811 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12006 esv18811 1 511276 512394 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv51842 S 451 1 0 "" NA12006 essv57440 1 511276 554321 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11993 essv75601 1 511276 554321 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12414 essv58239 1 511276 554445 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19108 esv10580 1 511276 564958 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv58239,essv81202,essv36813,essv57440,essv51804,essv61475,essv39460,essv75601,essv79491,essv56439,essv68086 M 451 0 11 "" NA11894,NA11993,NA12006,NA12239,NA12287,NA12414,NA12749,NA12776,NA18858,NA19108,NA19114 essv40580 1 511276 628840 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20880 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12878 essv72287 1 511276 630348 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20880 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19225 essv60486 1 511276 700708 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20880 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 NA18523 esv20880 1 511276 700708 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv49251,essv72287,essv40580,essv60486 M 451 4 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 NA07037,NA12878,NA18523,NA19225 essv3586722 1 511321 537742 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv992503 "" S 3 0 1 "" HuRef essv55274 1 511416 533670 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12770 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19099 esv12770 1 511416 533670 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv55274 S 451 1 0 "" NA19099 essv61475 1 511511 564958 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12239 nssv21426 1 511529 554315 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA10863 essv39460 1 511975 554321 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12287 essv79491 1 511975 554403 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12749 nssv547897 1 512002 746646 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471522 "" S 3 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv547898 1 512002 746646 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471522 "" S 3 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv547899 1 512002 746646 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471522 "" S 3 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 essv36813 1 512070 554321 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11894 essv51804 1 512440 554321 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12006 essv68086 1 512440 576379 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18858 essv56439 1 512905 554321 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12776 nssv18095 1 513228 615673 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA10847 nssv21439 1 513228 631462 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18572 essv81202 1 513445 554257 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10580 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19114 nssv1441740 1 529118 646613 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830758 "" S 95 0 1 OR4F16,OR4F29,OR4F3 nssv1441851 1 529118 646613 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830758 "" S 95 0 1 OR4F16,OR4F29,OR4F3 nssv1441962 1 529118 646613 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830758 "" S 95 0 1 OR4F16,OR4F29,OR4F3 nssv1442073 1 529118 646613 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830758 "" S 95 0 1 OR4F16,OR4F29,OR4F3 nssv1442184 1 529118 646613 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830758 "" S 95 0 1 OR4F16,OR4F29,OR4F3 nssv1442295 1 529118 646613 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830758 "" S 95 0 1 OR4F16,OR4F29,OR4F3 nssv1442406 1 529118 646613 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830758 "" S 95 0 1 OR4F16,OR4F29,OR4F3 nssv1442517 1 529118 646613 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830758 "" S 95 0 1 OR4F16,OR4F29,OR4F3 nssv26896 1 534191 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18972 nssv14769 1 536277 537800 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA12740 nssv18120 1 536293 537800 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA19221 nssv21447 1 536293 537800 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA19132 nssv21446 1 536293 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19007 essv64244 1 536486 537651 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18879 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA07045 esv18879 1 536486 537742 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv64244,essv44179 M 451 0 2 "" NA07045,NA12489 essv44179 1 536581 537742 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18879 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12489 nssv14778 1 537801 560122 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18564 nssv18092 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA07029 nssv18098 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA12155 nssv18099 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA12740 nssv18102 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18502 nssv18104 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18517 nssv18106 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18552 nssv18107 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18563 nssv18110 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18853 nssv18112 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18942 nssv18114 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18975 nssv18118 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19144 nssv18121 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19240 nssv21424 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA10839 nssv21435 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18537 nssv21441 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18860 nssv21450 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19221 nssv24597 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA10863 nssv24604 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18504 nssv24618 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19132 nssv24620 1 537801 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19173 essv93159 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750655 "" S 51 0 1 OR4F16,OR4F29,OR4F3 21863 essv93411 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750575 "" S 51 0 1 OR4F16,OR4F29,OR4F3 22170 essv93757 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750566 "" S 51 0 1 OR4F16,OR4F29,OR4F3 21972 essv93793 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750643 "" S 51 0 1 OR4F16,OR4F29,OR4F3 21634 essv94910 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750553 "" S 51 0 1 OR4F16,OR4F29,OR4F3 22231 essv95376 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750552 "" S 51 0 1 OR4F16,OR4F29,OR4F3 21872 essv95470 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750723 "" S 51 0 1 OR4F16,OR4F29,OR4F3 21847 essv95883 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750735 "" S 51 0 1 OR4F16,OR4F29,OR4F3 21911 essv96195 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750730 "" S 51 0 1 OR4F16,OR4F29,OR4F3 22007 essv96283 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750642 "" S 51 0 1 OR4F16,OR4F29,OR4F3 22371 essv97703 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750702 "" S 51 0 1 OR4F16,OR4F29,OR4F3 22278 essv97880 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750488 "" S 51 0 1 OR4F16,OR4F29,OR4F3 21837 essv99092 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv2750751 "" S 51 0 1 OR4F16,OR4F29,OR4F3 21938 esv2750488 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv97880 S 51 0 1 OR4F16,OR4F29,OR4F3 21837 esv2750552 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv95376 S 51 0 1 OR4F16,OR4F29,OR4F3 21872 esv2750553 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv94910 S 51 0 1 OR4F16,OR4F29,OR4F3 22231 esv2750566 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv93757 S 51 0 1 OR4F16,OR4F29,OR4F3 21972 esv2750575 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv93411 S 51 0 1 OR4F16,OR4F29,OR4F3 22170 esv2750642 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv96283 S 51 0 1 OR4F16,OR4F29,OR4F3 22371 esv2750643 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv93793 S 51 0 1 OR4F16,OR4F29,OR4F3 21634 esv2750655 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv93159 S 51 0 1 OR4F16,OR4F29,OR4F3 21863 esv2750702 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv97703 S 51 0 1 OR4F16,OR4F29,OR4F3 22278 esv2750723 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv95470 S 51 0 1 OR4F16,OR4F29,OR4F3 21847 esv2750730 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv96195 S 51 0 1 OR4F16,OR4F29,OR4F3 22007 esv2750735 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv95883 S 51 0 1 OR4F16,OR4F29,OR4F3 21911 esv2750751 1 554297 639610 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray dgv1e24 essv99092 S 51 0 1 OR4F16,OR4F29,OR4F3 21938 nssv18101 1 554315 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA12872 nssv24594 1 554315 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA07048 nssv463227 1 554340 696231 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) nsv433346 "" S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 NA12156 nssv463228 1 554340 696231 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) nsv433347 "" S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 NA19240 nsv433346 1 554340 696231 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) dgv2n14 nssv463227 S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 NA12156 nsv433347 1 554340 696231 CNV Gain Cooper et al 2008 18776910 SNP_array Illumina Human1Mv1 DNA Analysis BeadChip (Human1Mv1_C) dgv2n14 nssv463228 S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 NA19240 essv39034 1 554403 560151 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12287 essv56022 1 554403 560151 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12776 essv66578 1 554403 560151 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12828 essv76336 1 554403 560151 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12414 essv57524 1 554403 560267 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA11993 esv12525 1 554403 560267 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv78333,essv43148,essv70548,essv63677,essv57524,essv82685,essv65388,essv69512,essv39034,essv76336,essv79193,essv56022,essv66578,essv76584 M 451 12 2 "" NA06985,NA07045,NA11993,NA12044,NA12287,NA12414,NA12749,NA12776,NA12828,NA18511,NA18909,NA18916,NA19190,NA19240 nssv1419880 1 554403 560638 CNV Duplication Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv820617 "" S 1 1 0 Samples from several populations that are part of the HapMap project. "" NA10851 essv70548 1 554445 559414 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18916 essv63677 1 554445 560029 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA07045 essv69512 1 554445 560151 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12044 essv79193 1 554445 560151 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12749 essv65388 1 554524 560029 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19240 essv76584 1 554524 560267 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18511 essv78333 1 554697 560247 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA06985 essv49251 1 554992 698725 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20880 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 NA07037 essv82685 1 555476 560638 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19190 nssv18115 1 555901 564196 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18980 essv43148 1 556781 560141 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12525 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18909 essv37091 1 560247 563505 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17045 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11894 essv51990 1 560247 563785 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17045 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12006 esv17045 1 560247 563785 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv37091,essv51990 M 451 0 2 "" NA11894,NA12006 essv56296 1 560247 578016 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17998 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12776 esv17998 1 560247 578016 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv56296 S 451 0 1 "" NA12776 nssv26902 1 564196 575766 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA19173 nssv1442629 1 569355 733174 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 1 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1442740 1 569355 733174 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 1 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1442851 1 569355 733174 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 1 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1442962 1 569355 733174 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 1 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1443073 1 569355 733174 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 1 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1443184 1 569355 733174 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 1 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1443295 1 569355 733174 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 1 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1443406 1 569355 733174 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 1 0 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1443517 1 569355 733174 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 0 1 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 nssv1443628 1 569355 733174 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831869 "" S 95 0 1 LOC100133331,LOC100288069,OR4F16,OR4F29,OR4F3 essv43722 1 576218 626796 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17928 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18909 esv17928 1 576218 649836 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv43722,essv54737,essv83584,essv45129,essv41594,essv76588 M 451 6 0 OR4F16,OR4F29,OR4F3 NA12489,NA18505,NA18511,NA18909,NA19099,NA19190 essv54737 1 576365 626625 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17928 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19099 essv83584 1 576365 649836 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17928 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA19190 essv45831 1 576434 582203 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17670 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19129 esv17670 1 576434 582203 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv45831,essv65726 M 451 2 0 "" NA19129,NA19240 essv68280 1 576434 596312 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19173 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18858 esv19173 1 576434 596312 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv68280 S 451 1 0 "" NA18858 essv41594 1 576434 626736 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17928 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18505 essv76588 1 576434 626796 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17928 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18511 essv45129 1 576586 626796 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17928 "" S 451 1 0 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA12489 essv65726 1 577260 582203 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17670 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19240 nssv24606 1 581772 614218 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. OR4F16,OR4F29,OR4F3 NA18537 nssv24595 1 583780 585002 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA10839 nssv28054 1 583780 585002 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA19173 essv68952 1 596369 597273 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16417 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18858 esv16417 1 596369 597273 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv68952 S 451 0 1 "" NA18858 nssv24612 1 617789 618093 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18860 nssv26886 1 617789 618093 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10050 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18504 essv19551 1 622781 802347 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv7e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC100133331,LOC100288069,LOC643837 NA12864 essv21546 1 622781 802347 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv7e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC100133331,LOC100288069,LOC643837 NA12873 essv4575 1 622781 802347 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv7e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC100133331,LOC100288069,LOC643837 NA18524 essv5520 1 622781 802347 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv7e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC100133331,LOC100288069,LOC643837 NA18529 essv8112 1 622781 802347 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv7e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC100133331,LOC100288069,LOC643837 NA19206 essv52736 1 627101 713934 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17284 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC100133331,LOC100288069 NA12006 esv17284 1 627101 713934 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv52736 S 451 1 0 LOC100133331,LOC100288069 NA12006 essv50157 1 654275 665736 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19351 "" S 451 0 1 Samples from several populations that are part of the HapMap project. LOC100133331 NA18517 esv19351 1 654275 665981 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21732 essv72522,essv50157 M 451 0 2 LOC100133331 NA18517,NA19225 essv72522 1 654900 665981 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19351 "" S 451 0 1 Samples from several populations that are part of the HapMap project. LOC100133331 NA19225 nssv1567218 1 664795 746302 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870961 "" S 6533 1 0 LOC100288069 IS31046 nssv1531341 1 688908 783810 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871796 "" S 6533 1 0 LINC00115,LOC100288069,LOC643837 MS10393 nsv871796 1 688908 783810 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv5n71 nssv1531341 S 6533 1 0 LINC00115,LOC100288069,LOC643837 MS10393 nssv1522753 1 696231 758845 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871546 "" S 6533 1 0 LINC00115,LOC100288069,LOC643837 SP53412 nsv871546 1 696231 758845 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv6n71 nssv1522753 S 6533 1 0 LINC00115,LOC100288069,LOC643837 SP53412 nssv1504340 1 696231 788822 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870864 "" S 6533 1 0 LINC00115,LOC100288069,LOC643837 SP52432 nsv870864 1 696231 788822 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv5n71 nssv1504340 S 6533 1 0 LINC00115,LOC100288069,LOC643837 SP52432 nssv24610 1 701974 754703 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. LINC00115,LOC100288069,LOC643837 NA18572 nssv18108 1 701974 841241 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC100288069,LOC643837 NA18564 nssv1516878 1 707348 752518 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871902 "" S 6533 1 0 LINC00115 SP56965 nssv1518759 1 707348 752518 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871902 "" S 6533 1 0 LINC00115 SP57983 nsv871902 1 707348 752518 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv6n71 nssv1518759,nssv1516878 M 6533 2 0 LINC00115 SP56965,SP57983 nssv1599688 1 707348 766409 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871246 "" S 6533 1 0 LINC00115,LOC643837 IS41769 nsv871246 1 707348 766409 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv6n71 nssv1599688 S 6533 1 0 LINC00115,LOC643837 IS41769 nssv1504254 1 707348 782343 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870766 "" S 6533 1 0 LINC00115,LOC643837 SP52377 nsv870766 1 707348 782343 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv5n71 nssv1504254 S 6533 1 0 LINC00115,LOC643837 SP52377 nssv1559165 1 707348 792493 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871816 "" S 6533 1 0 LINC00115,LOC643837 MS23767 nsv871816 1 707348 792493 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv5n71 nssv1559165 S 6533 1 0 LINC00115,LOC643837 MS23767 nssv619756 1 707782 733936 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508722 "" S 4 1 0 Samples from several populations that are part of the HapMap project. "" NA10860 nssv624357 1 707782 733936 CNV Complex Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv510950 "" S 4 0 0 Samples from several populations that are part of the HapMap project. "" NA18994 nssv621648 1 707782 737205 CNV Complex Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv510950 "" S 4 0 0 "" NA15510 nssv1500970 1 713170 758311 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871505 "" S 6533 1 0 LINC00115,LOC643837 SP51051 nsv871505 1 713170 758311 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv6n71 nssv1500970 S 6533 1 0 LINC00115,LOC643837 SP51051 nssv626981 1 713995 716800 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv513729 "" S 1 1 0 "" 1 essv52724 1 714177 716109 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17593 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12006 essv37586 1 714177 716949 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17593 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11894 esv17593 1 714177 717108 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26272 essv37586,essv52724,essv39478,essv67358 M 451 0 4 "" NA11894,NA12006,NA12287,NA12828 nssv1420291 1 714177 717108 CNV Duplication Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv820807 "" S 1 1 0 Samples from several populations that are part of the HapMap project. "" NA10851 essv67358 1 714268 717001 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17593 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12828 essv39478 1 714268 717108 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17593 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12287 nssv1437923 1 736271 839276 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv821697 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC643837 NA18951 nsv821697 1 736271 839276 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv1n67 nssv1437923 S 31 1 0 FAM41C,LINC00115,LOC643837 NA18951 nssv1423928 1 736471 839487 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822808 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC643837 NA18947 nssv1431930 1 736471 839487 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822808 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC643837 NA18972 nsv822808 1 736471 839487 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv1n67 nssv1431930,nssv1423928 M 31 2 0 FAM41C,LINC00115,LOC643837 NA18947,NA18972 nssv1440110 1 736471 839800 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823919 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM41C,LINC00115,LOC643837 NA18564 nsv823919 1 736471 839800 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv1n67 nssv1440110 S 31 1 0 FAM41C,LINC00115,LOC643837 NA18564 nssv21429 1 741750 745476 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA12740 nssv21431 1 741750 749653 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA12872 nssv652918 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv654371 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv657472 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv658652 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv660727 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv662132 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv662754 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv667239 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv668090 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv669544 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv670683 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv677805 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv677935 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv681209 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv688100 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 nssv691743 1 742429 758311 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 LINC00115,LOC643837 essv6979725 1 742429 789326 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv34886 "" S 771 The standard phase II HapMap population (N=270) plus a single control individual LINC00115,LOC643837 NA18620 essv6979726 1 742429 789326 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv34886 "" S 771 The standard phase II HapMap population (N=270) plus a single control individual LINC00115,LOC643837 NA18620 essv6980054 1 742429 789326 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv34681 "" S 771 The standard phase II HapMap population (N=270) plus a single control individual LINC00115,LOC643837 NA18947 essv6980055 1 742429 789326 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv34681 "" S 771 The standard phase II HapMap population (N=270) plus a single control individual LINC00115,LOC643837 NA18947 esv34681 1 742429 789326 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array dgv1e55 essv6980054,essv6980055 M 771 1 0 LINC00115,LOC643837 NA18947 esv34886 1 742429 789326 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array dgv1e55 essv6979725,essv6979726 M 771 1 0 LINC00115,LOC643837 NA18620 nssv700902 1 742429 1011278 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 0 1 AGRN,C1orf159,C1orf170,FAM41C,HES4,ISG15,KLHL17,LINC00115,LOC100130417,LOC643837,NOC2L,PLEKHN1,RNF223,SAMD11 nssv683576 1 742429 1201155 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 AGRN,B3GALT6,C1orf159,C1orf170,FAM132A,FAM41C,HES4,ISG15,KLHL17,LINC00115,LOC100130417,LOC254099,LOC643837,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,SAMD11,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 essv96332 1 742559 780333 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33946 "" S 51 1 0 LINC00115,LOC643837 22371 essv70296 1 744056 752485 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14965 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LINC00115 NA18916 esv14965 1 744056 752485 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27271 essv70296 S 451 1 0 LINC00115 NA18916 essv101171 1 744068 757944 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33946 "" S 51 1 0 LINC00115,LOC643837 21618 nssv24600 1 744870 748953 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA12740 essv3703690 1 746130 746130 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1032937 "" S 2 1 0 "" HuRef nssv1550103 1 751010 814156 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871252 "" S 6533 1 0 FAM41C,LINC00115,LOC643837 MS18290 nssv1501433 1 753670 792493 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871911 "" S 6533 1 0 LOC643837 SP50857 nssv1515117 1 753670 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871815 "" S 6533 1 0 FAM41C,LOC643837 SP56125 nsv871815 1 753670 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv7n71 nssv1515117 S 6533 1 0 FAM41C,LOC643837 SP56125 nssv1516410 1 758845 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870966 "" S 6533 1 0 FAM41C,LOC643837 SP56832 nsv870966 1 758845 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv7n71 nssv1516410 S 6533 1 0 FAM41C,LOC643837 SP56832 nssv1502771 1 758845 841053 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870659 "" S 6533 1 0 FAM41C,LOC643837 SP51411 nsv870659 1 758845 841053 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv7n71 nssv1502771 S 6533 1 0 FAM41C,LOC643837 SP51411 nssv26892 1 758980 840729 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. FAM41C,LOC643837 NA18572 nssv28048 1 761037 780903 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. LOC643837 NA18972 nssv3151 1 762262 782522 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv298 "" S 9 1 0 Samples from several populations that are part of the HapMap project. LOC643837 NA12878 nssv1517082 1 769185 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871355 "" S 6533 1 0 FAM41C,LOC643837 SP57163 nsv871355 1 769185 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv7n71 nssv1517082 S 6533 1 0 FAM41C,LOC643837 SP57163 nssv1443740 1 773522 932280 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832980 "" S 95 1 0 C1orf170,FAM41C,HES4,KLHL17,LOC100130417,LOC643837,NOC2L,PLEKHN1,SAMD11 nssv1516769 1 773886 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871271 "" S 6533 1 0 FAM41C,LOC643837 SP56927 nsv871271 1 773886 836671 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv7n71 nssv1516769 S 6533 1 0 FAM41C,LOC643837 SP56927 nssv1502324 1 773886 841053 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871722 "" S 6533 1 0 FAM41C,LOC643837 SP50880 nsv871722 1 773886 841053 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv7n71 nssv1502324 S 6533 1 0 FAM41C,LOC643837 SP50880 essv4242314 1 778884 778933 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1517733 "" S 2 0 1 LOC643837 HuRef nssv619757 1 779622 810192 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508924 "" S 4 1 0 Samples from several populations that are part of the HapMap project. FAM41C NA10860 essv3978908 1 792114 792114 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1069885 "" S 2 1 0 "" HuRef nssv450908 1 799614 1145812 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428334 "" S 62 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations AGRN,C1orf159,C1orf170,FAM41C,HES4,ISG15,KLHL17,LOC100130417,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,SAMD11,SDF4,TNFRSF18,TNFRSF4,TTLL10 HGDP00467 essv3564868 1 800940 801701 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv991325 "" S 3 1 0 FAM41C HuRef nssv1423341 1 802861 1351743 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825030 "" S 31 1 0 Samples from several populations that are part of the HapMap project. ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,C1orf170,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC100130417,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 NA18968 nsv825030 1 802861 1351743 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv2n67 nssv1423341 S 31 1 0 ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,C1orf170,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC100130417,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 NA18968 nssv619758 1 816649 910967 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509035 "" S 4 1 0 Samples from several populations that are part of the HapMap project. C1orf170,KLHL17,LOC100130417,NOC2L,PLEKHN1,SAMD11 NA10860 nssv621079 1 816649 910967 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509035 "" S 4 1 0 C1orf170,KLHL17,LOC100130417,NOC2L,PLEKHN1,SAMD11 NA15510 nssv1510620 1 820044 871896 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871644 "" S 6533 0 1 LOC100130417,NOC2L,SAMD11 SP54988 nsv871644 1 820044 871896 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv8n71 nssv1510620 S 6533 0 1 LOC100130417,NOC2L,SAMD11 SP54988 nssv1564241 1 820044 1020428 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871883 "" S 6533 1 0 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 IS30191 nssv1573158 1 820044 1020428 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871883 "" S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 IS33248 nssv1593358 1 820044 1033923 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871440 "" S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 IS39417 nsv871440 1 820044 1033923 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv9n71 nssv1593358 S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 IS39417 nssv1530399 1 820044 1051029 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870592 "" S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 MS10311 nsv870592 1 820044 1051029 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv9n71 nssv1530399 S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,NOC2L,PLEKHN1,RNF223,SAMD11 MS10311 nssv1574977 1 820044 1184667 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871547 "" S 6533 0 1 AGRN,B3GALT6,C1orf159,C1orf170,FAM132A,HES4,ISG15,KLHL17,LOC100130417,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,SAMD11,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS33684 nssv1532351 1 820044 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871723 "" S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC100130417,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS10769 nssv1580797 1 820044 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871723 "" S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC100130417,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS35484 nsv871723 1 820044 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv10n71 nssv1580797,nssv1532351 M 6533 0 2 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC100130417,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS35484,MS10769 nssv24621 1 823971 1698509 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC100130417,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,NADK,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 NA19221 nssv1507811 1 828418 871896 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871061 "" S 6533 0 1 LOC100130417,NOC2L,SAMD11 SP54725 nssv1511299 1 828418 871896 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871061 "" S 6533 0 1 LOC100130417,NOC2L,SAMD11 SP55021 nsv871061 1 828418 871896 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv8n71 nssv1507811,nssv1511299 M 6533 0 2 LOC100130417,NOC2L,SAMD11 SP54725,SP55021 nssv28552 1 831205 839192 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18972 nssv26877 1 834134 836195 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA10839 essv3716763 1 834463 834729 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1562509 "" S 2 0 1 "" HuRef nssv1509703 1 841053 1064487 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871153 "" S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,LOC254099,NOC2L,PLEKHN1,RNF223,SAMD11 SP54956 nsv871153 1 841053 1064487 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv9n71 nssv1509703 S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC100130417,LOC254099,NOC2L,PLEKHN1,RNF223,SAMD11 SP54956 nssv1440790 1 856299 1351743 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826141 "" S 31 1 0 Samples from several populations that are part of the HapMap project. ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,C1orf170,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 NA18969 nsv826141 1 856299 1351743 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv2n67 nssv1440790 S 31 1 0 ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,C1orf170,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SAMD11,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 NA18969 nssv626307 1 859114 860723 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv511670 "" S 1 0 1 SAMD11 1 essv43529 1 859173 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18909 essv45759 1 859173 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA19129 essv58180 1 859173 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA19108 essv68737 1 859173 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18858 esv10036 1 859173 860210 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27608 essv47005,essv78363,essv36398,essv43529,essv48682,essv71436,essv55498,essv63924,essv58180,essv36634,essv82528,essv45759,essv51610,essv32263,essv57554,essv84124,essv72095,essv74988,essv38639,essv52404,essv73216,essv61133,essv39448,essv75965,essv44303,essv56260,essv67398,essv40569,essv63145,essv34096,essv41839,essv52984,essv77133,essv49479,essv60716,essv68737 M 451 24 12 SAMD11 NA06985,NA07037,NA07045,NA11894,NA11931,NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12776,NA12828,NA12878,NA15510,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19190,NA19225,NA19257 essv34096 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18502 essv3586109 1 859278 860210 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv989364 "" S 3 0 1 SAMD11 HuRef essv36398 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18907 essv36634 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA11894 essv39448 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA12287 essv40569 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA12878 essv41839 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18505 essv44303 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA12489 essv47005 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18861 essv48682 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA07037 essv49479 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18517 essv51610 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA11931 essv52404 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA12006 essv52984 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18508 essv55498 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA19099 essv56260 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA12776 essv57554 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA11993 essv60716 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18523 essv61133 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA12239 essv63145 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 SAMD11 NA15510 essv63924 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA07045 essv67398 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA12828 essv71436 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18916 essv72095 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA19225 essv73216 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA12156 essv74988 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA12004 essv75965 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA12414 essv77133 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA18511 essv78363 1 859278 860210 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA06985 essv82528 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA19114 essv84124 1 859278 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA19190 essv32263 1 859293 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA19147 essv38639 1 859293 860210 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10036 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SAMD11 NA19257 essv4110931 1 859334 859446 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1732269 "" S 2 0 1 SAMD11 HuRef essv4275138 1 859459 860187 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1062785 "" S 2 0 1 SAMD11 HuRef essv4643302 1 861356 861730 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2066434 "" S 1 0 1 Samples from several populations that are part of the HapMap project. SAMD11 NA18507 nssv1512780 1 876247 908247 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870660 "" S 6533 0 1 C1orf170,KLHL17,NOC2L,PLEKHN1 SP55624 nssv1531242 1 878522 1125105 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870743 "" S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,TTLL10 MS10386 nsv870743 1 878522 1125105 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv11n71 nssv1531242 S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC254099,MIR200A,MIR200B,MIR429,NOC2L,PLEKHN1,RNF223,TTLL10 MS10386 nssv1544209 1 878522 1483590 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871621 "" S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf70,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SCNN1D,SDF4,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS16315 nsv871621 1 878522 1483590 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv10n71 nssv1544209 S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf70,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,NOC2L,PLEKHN1,PUSL1,RNF223,SCNN1D,SDF4,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS16315 nssv558397 1 885830 890958 CNV Gain Schuster et al 2010 20164927 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer nsv482036 "" S 1 1 0 KLHL17 KB1 essv3568238 1 889874 889948 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1003697 "" S 3 0 1 KLHL17 HuRef nssv177893 1 890012 890087 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159315 "" M 24 KLHL17 nssv1592081 1 890368 1125105 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871885 "" S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC254099,MIR200A,MIR200B,MIR429,PLEKHN1,RNF223,TTLL10 IS39233 nsv871885 1 890368 1125105 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv11n71 nssv1592081 S 6533 0 1 AGRN,C1orf159,C1orf170,HES4,ISG15,KLHL17,LOC254099,MIR200A,MIR200B,MIR429,PLEKHN1,RNF223,TTLL10 IS39233 nssv1543338 1 890368 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870831 "" S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PLEKHN1,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS16153 nsv870831 1 890368 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv10n71 nssv1543338 S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf170,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,KLHL17,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PLEKHN1,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS16153 essv3565170 1 900918 903597 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1001028 "" S 3 1 0 C1orf170 HuRef essv4038215 1 902141 903171 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1165796 "" S 2 0 1 C1orf170 HuRef nssv1585771 1 908247 1125105 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870593 "" S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,TTLL10 IS37646 nsv870593 1 908247 1125105 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv11n71 nssv1585771 S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,TTLL10 IS37646 nssv1529768 1 908247 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871063 "" S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS10123 nsv871063 1 908247 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1529768 S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS10123 nssv1538558 1 908247 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871541 "" S 6533 0 1 ACAP3,AGRN,ATAD3C,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS13770 nsv871541 1 908247 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1538558 S 6533 0 1 ACAP3,AGRN,ATAD3C,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS13770 nssv1546431 1 908247 1680910 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870496 "" S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,NADK,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS17208 nsv870496 1 908247 1680910 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv10n71 nssv1546431 S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,NADK,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS17208 essv3565560 1 918544 920627 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv997839 "" S 3 0 1 "" HuRef nssv1575567 1 918699 1064487 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871160 "" S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,RNF223 IS33776 nsv871160 1 918699 1064487 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv13n71 nssv1575567 S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,RNF223 IS33776 nssv1549594 1 918699 1084601 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871619 "" S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,RNF223 MS18276 nsv871619 1 918699 1084601 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv13n71 nssv1549594 S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,RNF223 MS18276 nssv1573723 1 918699 1125105 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870573 "" S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,TTLL10 IS33504 nsv870573 1 918699 1125105 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv11n71 nssv1573723 S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,TTLL10 IS33504 nssv1576665 1 918699 1142494 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871055 "" S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SDF4,TNFRSF18,TNFRSF4,TTLL10 IS34235 nsv871055 1 918699 1142494 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv11n71 nssv1576665 S 6533 0 1 AGRN,C1orf159,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SDF4,TNFRSF18,TNFRSF4,TTLL10 IS34235 nssv1574870 1 918699 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870755 "" S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS33665 nsv870755 1 918699 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1574870 S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS33665 nssv1538393 1 918699 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871632 "" S 6533 0 1 ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS13727 nsv871632 1 918699 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1538393 S 6533 0 1 ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS13727 nssv1588166 1 918699 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871516 "" S 6533 0 1 ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS38176 nsv871516 1 918699 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1588166 S 6533 0 1 ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS38176 nssv1570666 1 918699 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870837 "" S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS32322 nsv870837 1 918699 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv10n71 nssv1570666 S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS32322 nssv1576871 1 918699 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871887 "" S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS34304 nsv871887 1 918699 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv10n71 nssv1576871 S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,HES4,ISG15,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS34304 nssv1500911 1 919053 967643 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871483 "" S 6533 0 1 AGRN,HES4,ISG15 SP51109 nssv177906 1 921528 921593 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159328 "" M 24 "" essv3713900 1 921643 921643 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1776849 "" S 2 1 0 "" HuRef nssv177997 1 921844 921974 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159419 "" M 24 "" nssv1436318 1 923968 926370 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827252 "" S 31 1 0 Samples from several populations that are part of the HapMap project. HES4 NA18542 nssv1533515 1 933331 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870556 "" S 6533 0 1 AGRN,B3GALT6,C1orf159,FAM132A,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS11237 nsv870556 1 933331 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv11n71 nssv1533515 S 6533 0 1 AGRN,B3GALT6,C1orf159,FAM132A,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS11237 nssv1599095 1 933331 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871428 "" S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS41410 nsv871428 1 933331 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1599095 S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS41410 nssv1584756 1 933331 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871124 "" S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS37172 nsv871124 1 933331 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv10n71 nssv1584756 S 6533 0 1 ACAP3,AGRN,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS37172 nssv1434856 1 934543 938639 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828363 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18942 nssv1436320 1 934543 938639 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828363 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18542 nssv619759 1 935753 1036431 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509146 "" S 4 1 0 Samples from several populations that are part of the HapMap project. AGRN,C1orf159,ISG15,RNF223 NA10860 nssv621080 1 935753 1036431 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509146 "" S 4 1 0 AGRN,C1orf159,ISG15,RNF223 NA15510 nssv1500121 1 938821 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870473 "" S 6533 0 1 AGRN,ISG15 SP50159 nsv870473 1 938821 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv14n71 nssv1500121 S 6533 0 1 AGRN,ISG15 SP50159 nssv1572766 1 939331 1064487 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870574 "" S 6533 0 1 AGRN,C1orf159,ISG15,LOC254099,RNF223 IS33178 nsv870574 1 939331 1064487 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv13n71 nssv1572766 S 6533 0 1 AGRN,C1orf159,ISG15,LOC254099,RNF223 IS33178 nssv1574779 1 939331 1077546 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871064 "" S 6533 0 1 AGRN,C1orf159,ISG15,LOC254099,RNF223 IS33630 nssv1575687 1 939331 1077546 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871064 "" S 6533 0 1 AGRN,C1orf159,ISG15,LOC254099,RNF223 IS33797 nsv871064 1 939331 1077546 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv13n71 nssv1574779,nssv1575687 M 6533 0 2 AGRN,C1orf159,ISG15,LOC254099,RNF223 IS33630,IS33797 nssv1576245 1 939331 1096336 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871522 "" S 6533 0 1 AGRN,C1orf159,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223 IS34005 nsv871522 1 939331 1096336 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv13n71 nssv1576245 S 6533 0 1 AGRN,C1orf159,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223 IS34005 nssv1574570 1 939331 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871789 "" S 6533 0 1 AGRN,B3GALT6,C1orf159,FAM132A,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS33601 nssv1597783 1 939331 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871789 "" S 6533 0 1 AGRN,B3GALT6,C1orf159,FAM132A,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS41243 nsv871789 1 939331 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv11n71 nssv1574570,nssv1597783 M 6533 0 2 AGRN,B3GALT6,C1orf159,FAM132A,ISG15,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS33601,IS41243 nssv1576404 1 939331 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871945 "" S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS34057 nsv871945 1 939331 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1576404 S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS34057 nssv1599349 1 939331 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870840 "" S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS41634 nsv870840 1 939331 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1599349 S 6533 0 1 ACAP3,AGRN,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS41634 nssv1531905 1 939331 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870543 "" S 6533 0 1 ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS10698 nsv870543 1 939331 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv12n71 nssv1531905 S 6533 0 1 ACAP3,AGRN,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,ISG15,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS10698 nssv1511300 1 939517 1002388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870826 "" S 6533 0 1 AGRN,ISG15,RNF223 SP55021 nsv870826 1 939517 1002388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv15n71 nssv1511300 S 6533 0 1 AGRN,ISG15,RNF223 SP55021 nssv1510621 1 940106 1002388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870936 "" S 6533 0 1 AGRN,RNF223 SP54988 nsv870936 1 940106 1002388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv15n71 nssv1510621 S 6533 0 1 AGRN,RNF223 SP54988 nssv1511160 1 940371 969611 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871424 "" S 6533 0 1 AGRN SP55019 nssv1508259 1 940371 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870533 "" S 6533 0 1 AGRN SP54657 nssv1508623 1 940371 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870533 "" S 6533 0 1 AGRN SP54593 nsv870533 1 940371 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv14n71 nssv1508623,nssv1508259 M 6533 0 2 AGRN SP54593,SP54657 nssv1514260 1 940371 984254 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870603 "" S 6533 0 1 AGRN SP55992 nsv870603 1 940371 984254 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv14n71 nssv1514260 S 6533 0 1 AGRN SP55992 nssv1505906 1 940371 1002388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871669 "" S 6533 0 1 AGRN,RNF223 SP54043 nssv1508143 1 940371 1002388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871669 "" S 6533 0 1 AGRN,RNF223 SP54684 nssv1508976 1 940371 1002388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871669 "" S 6533 0 1 AGRN,RNF223 SP54725 nsv871669 1 940371 1002388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv15n71 nssv1508976,nssv1505906,nssv1508143 M 6533 0 3 AGRN,RNF223 SP54043,SP54684,SP54725 nssv1510485 1 949705 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870594 "" S 6533 0 1 AGRN SP54967 nsv870594 1 949705 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv16n71 nssv1510485 S 6533 0 1 AGRN SP54967 nssv1507435 1 952583 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871495 "" S 6533 0 1 AGRN SP54672 nsv871495 1 952583 977063 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv16n71 nssv1507435 S 6533 0 1 AGRN SP54672 nssv1503528 1 952583 1002388 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871557 "" S 6533 1 0 AGRN,RNF223 SP52077 essv69735 1 953522 954343 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19930 "" S 451 0 1 Samples from several populations that are part of the HapMap project. AGRN NA12044 esv19930 1 953522 954343 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv29017 essv51669,essv65846,essv69735,essv76361,essv79600,essv56154 M 451 0 6 AGRN NA11931,NA12044,NA12414,NA12749,NA12776,NA19240 essv3586137 1 953683 954343 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv987912 "" S 3 0 1 AGRN HuRef essv56154 1 953683 954343 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19930 "" S 451 0 1 Samples from several populations that are part of the HapMap project. AGRN NA12776 essv26856 1 953701 954430 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv4415 "" S 1 0 1 Single Asian sample YH AGRN YH essv51669 1 953728 954343 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19930 "" S 451 0 1 Samples from several populations that are part of the HapMap project. AGRN NA11931 essv65846 1 953728 954343 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19930 "" S 451 0 1 Samples from several populations that are part of the HapMap project. AGRN NA19240 essv79600 1 953728 954343 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19930 "" S 451 0 1 Samples from several populations that are part of the HapMap project. AGRN NA12749 essv76361 1 953858 954343 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19930 "" S 451 0 1 Samples from several populations that are part of the HapMap project. AGRN NA12414 essv28958 1 954844 955351 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv6517 "" S 1 0 1 AGRN SJK essv3670093 1 955858 955858 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1064309 "" S 2 1 0 AGRN HuRef nssv1509304 1 970323 1019668 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870874 "" S 6533 0 1 AGRN,C1orf159,RNF223 SP54782 nssv1514668 1 970323 1054842 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871349 "" S 6533 0 1 AGRN,C1orf159,RNF223 SP56047 nssv1434857 1 981285 983720 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv829425 "" S 31 0 1 Samples from several populations that are part of the HapMap project. AGRN NA18942 nssv547649 1 995669 1109721 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470680 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf159,LOC254099,MIR200A,MIR200B,MIR429,RNF223,TTLL10 HGDP00825 nssv680332 1 995669 1201155 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517709 "" S 2026 1 0 B3GALT6,C1orf159,FAM132A,LOC254099,MIR200A,MIR200B,MIR429,RNF223,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 nssv547648 1 995669 1303878 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470680 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ACAP3,AURKAIP1,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,RNF223,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 HGDP00661 essv44855 1 1000836 1003176 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12489 essv39943 1 1001051 1004356 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12878 essv57084 1 1001051 1004546 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11993 esv14645 1 1001051 1004691 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25577 essv70505,essv54324,essv58719,essv46299,essv33453,essv57084,essv83309,essv64885,essv44855,essv39943,essv34297,essv77396 M 451 1 11 "" NA11993,NA12489,NA12878,NA18502,NA18511,NA18916,NA19099,NA19108,NA19129,NA19147,NA19190,NA19240 essv3586245 1 1001111 1004546 CNV Gain Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv998069 "" S 3 1 0 "" HuRef essv54324 1 1001111 1004546 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19099 essv64885 1 1001111 1004546 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19240 essv33453 1 1001111 1004691 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19147 essv83309 1 1001111 1004691 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19190 essv58719 1 1001136 1004521 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19108 essv34297 1 1001136 1004546 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18502 essv46299 1 1001136 1004546 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19129 essv77396 1 1001136 1004546 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18511 essv70505 1 1001136 1004691 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14645 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18916 nssv1592784 1 1008567 1064487 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870663 "" S 6533 0 1 C1orf159,LOC254099 IS39258 nssv1537041 1 1008567 1229798 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870958 "" S 6533 0 1 ACAP3,B3GALT6,C1orf159,FAM132A,LOC254099,MIR200A,MIR200B,MIR429,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS13095 nsv870958 1 1008567 1229798 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv17n71 nssv1537041 S 6533 0 1 ACAP3,B3GALT6,C1orf159,FAM132A,LOC254099,MIR200A,MIR200B,MIR429,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS13095 nssv4677 1 1020714 1049928 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1409 "" S 9 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19129 essv41179 1 1024180 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18505 essv76157 1 1024271 1025041 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA12414 essv33282 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19147 essv34833 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18502 essv3586664 1 1024271 1025066 CNV Gain Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv1010559 "" S 3 1 0 C1orf159 HuRef essv36026 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18907 essv37967 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19257 essv43569 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18909 essv45621 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19129 essv47880 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18861 essv50641 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18517 essv52757 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18508 essv59557 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18523 essv68366 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18858 essv71219 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18916 essv72970 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19225 essv78447 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA06985 essv79482 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA12749 essv81648 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19114 esv10745 1 1024271 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23529 essv78447,essv47880,essv36026,essv43569,essv71219,essv55633,essv59316,essv81648,essv45621,essv33282,essv72970,essv65289,essv37967,essv76157,essv79482,essv55845,essv67101,essv34833,essv41179,essv52757,essv77145,essv50641,essv59557,essv68366 M 451 24 0 C1orf159 NA06985,NA12414,NA12749,NA12776,NA12828,NA18502,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 essv67101 1 1024271 1025203 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA12828 essv55633 1 1024342 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19099 essv59316 1 1024342 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19108 essv65289 1 1024342 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA19240 essv77145 1 1024342 1025066 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA18511 essv55845 1 1024342 1025152 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10745 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf159 NA12776 essv4028372 1 1024878 1024878 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1281251 "" S 2 1 0 C1orf159 HuRef nssv1587966 1 1033923 1096336 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870869 "" S 6533 0 1 C1orf159,LOC254099,MIR200A,MIR200B,MIR429 IS38144 nsv870869 1 1033923 1096336 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv18n71 nssv1587966 S 6533 0 1 C1orf159,LOC254099,MIR200A,MIR200B,MIR429 IS38144 nssv1595631 1 1033923 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871553 "" S 6533 0 1 B3GALT6,C1orf159,FAM132A,LOC254099,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS40297 nssv1573039 1 1033923 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871822 "" S 6533 0 1 ACAP3,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS33239 nssv1595344 1 1033923 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871822 "" S 6533 0 1 ACAP3,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS40230 nsv871822 1 1033923 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv17n71 nssv1595344,nssv1573039 M 6533 0 2 ACAP3,B3GALT6,C1orf159,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS33239,IS40230 nssv1565132 1 1033923 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871394 "" S 6533 0 1 ACAP3,ATAD3C,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS30369 nssv1571440 1 1033923 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871394 "" S 6533 0 1 ACAP3,ATAD3C,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS32737 nsv871394 1 1033923 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv19n71 nssv1571440,nssv1565132 M 6533 0 2 ACAP3,ATAD3C,AURKAIP1,B3GALT6,C1orf159,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS30369,IS32737 nssv1571838 1 1033923 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871830 "" S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS32841 nsv871830 1 1033923 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv20n71 nssv1571838 S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf159,C1orf70,CCNL2,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC254099,LOC441869,LOC643988,MIB2,MIR200A,MIR200B,MIR429,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS32841 nssv179017 1 1034078 1034388 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160439 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans C1orf159 nssv1510622 1 1039813 1064487 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870771 "" S 6533 0 1 C1orf159,LOC254099 SP54988 nssv1530374 1 1039813 1109721 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871293 "" S 6533 0 1 C1orf159,LOC254099,MIR200A,MIR200B,MIR429,TTLL10 MS10311 nssv1548385 1 1039813 1109721 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871293 "" S 6533 0 1 C1orf159,LOC254099,MIR200A,MIR200B,MIR429,TTLL10 MS17825 nsv871293 1 1039813 1109721 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv18n71 nssv1530374,nssv1548385 M 6533 0 2 C1orf159,LOC254099,MIR200A,MIR200B,MIR429,TTLL10 MS10311,MS17825 essv92767 1 1040600 1042561 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32594 "" S 51 0 1 C1orf159 21944 essv96399 1 1040600 1042561 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32594 "" S 51 0 1 C1orf159 22371 nssv178771 1 1048777 1048856 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160193 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans "" nssv1573518 1 1052501 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871129 "" S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS33455 nsv871129 1 1052501 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv19n71 nssv1573518 S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC254099,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS33455 nssv1593359 1 1054842 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871432 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS39417 nsv871432 1 1054842 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv17n71 nssv1593359 S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS39417 essv5357752 1 1062939 1066829 CNV Loss McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2630187 "" S 1 0 1 LOC254099 NA18507 essv37159 1 1064242 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA11894 essv63439 1 1064242 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 LOC254099 NA15510 esv13049 1 1064242 1065980 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26506 essv43351,essv55570,essv37159,essv45185,essv32597,essv72504,essv38181,essv39302,essv76085,essv44454,essv79456,essv63439,essv35026,essv53385,essv50635,essv67560,essv47611 M 451 17 0 LOC254099 NA11894,NA12287,NA12414,NA12489,NA12749,NA15510,NA18502,NA18508,NA18517,NA18858,NA18861,NA18909,NA19099,NA19129,NA19147,NA19225,NA19257 essv39302 1 1064302 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA12287 essv35026 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA18502 essv43351 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA18909 essv45185 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA19129 essv47611 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA18861 essv50635 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA18517 essv55570 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA19099 essv67560 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA18858 essv72504 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA19225 essv76085 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA12414 essv79456 1 1064357 1065882 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA12749 essv32597 1 1064357 1065980 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA19147 essv38181 1 1064357 1065980 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA19257 essv44454 1 1064357 1065980 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA12489 essv53385 1 1064357 1066435 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13049 "" S 451 1 0 Samples from several populations that are part of the HapMap project. LOC254099 NA18508 nssv1564415 1 1065697 1278446 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870527 "" S 6533 1 0 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,LOC254099,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS30210 nssv179595 1 1065770 1065952 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv161017 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans LOC254099 nssv649869 1 1071325 1247478 CNV Gain Locke et al 2006 16826518 BAC_aCGH Eichler Segmental Duplication BAC array nsv469848 "" M 265 Samples from several populations that are part of the HapMap project. ACAP3,B3GALT6,CPSF3L,FAM132A,MIR200A,MIR200B,MIR429,PUSL1,SCNN1D,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 essv5287439 1 1073630 1078667 CNV Loss McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2524046 "" S 1 0 1 "" NA18507 essv5220272 1 1074686 1080803 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2587289 "" S 1 0 1 "" NA18507 essv4717325 1 1076513 1077044 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2317109 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 nssv619760 1 1077198 1114713 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509257 "" S 4 1 0 Samples from several populations that are part of the HapMap project. MIR200A,MIR200B,MIR429,TTLL10 NA10860 nssv1596363 1 1077546 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870699 "" S 6533 0 1 B3GALT6,FAM132A,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS40502 nsv870699 1 1077546 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv21n71 nssv1596363 S 6533 0 1 B3GALT6,FAM132A,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS40502 nssv1599197 1 1080420 1182378 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871744 "" S 6533 1 0 B3GALT6,FAM132A,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS41433 nssv1509704 1 1089205 1110877 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871079 "" S 6533 0 1 MIR200A,MIR200B,MIR429,TTLL10 SP54956 nssv1534088 1 1089205 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870767 "" S 6533 0 1 B3GALT6,FAM132A,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS11467 nssv1592785 1 1089205 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870767 "" S 6533 0 1 B3GALT6,FAM132A,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS39258 nsv870767 1 1089205 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv21n71 nssv1534088,nssv1592785 M 6533 0 2 B3GALT6,FAM132A,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS39258,MS11467 nssv1533729 1 1089205 1200826 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871637 "" S 6533 0 1 B3GALT6,FAM132A,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS11306 nsv871637 1 1089205 1200826 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv21n71 nssv1533729 S 6533 0 1 B3GALT6,FAM132A,MIR200A,MIR200B,MIR429,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS11306 nssv1564276 1 1089205 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871180 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS30197 nssv1600507 1 1089205 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871180 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS41894 nsv871180 1 1089205 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv22n71 nssv1564276,nssv1600507 M 6533 0 2 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MIR200A,MIR200B,MIR429,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS30197,IS41894 nssv1569649 1 1089205 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870540 "" S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS31656 nsv870540 1 1089205 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv19n71 nssv1569649 S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS31656 nssv1596023 1 1089205 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870625 "" S 6533 0 1 ACAP3,ATAD3C,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS40396 nsv870625 1 1089205 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv19n71 nssv1596023 S 6533 0 1 ACAP3,ATAD3C,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MIR200A,MIR200B,MIR429,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS40396 nssv1597255 1 1096336 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871915 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS40799 nsv871915 1 1096336 1182378 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv21n71 nssv1597255 S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS40799 nssv1530400 1 1096336 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871244 "" S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS10311 nsv871244 1 1096336 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv20n71 nssv1530400 S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 MS10311 nssv1436321 1 1102010 1102952 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv829536 "" S 31 1 0 Samples from several populations that are part of the HapMap project. TTLL10 NA18542 nssv1593131 1 1110133 1200826 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871107 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS39363 nssv26876 1 1110905 1123980 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. TTLL10 NA07048 nssv1587967 1 1111657 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871404 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS38144 nsv871404 1 1111657 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv22n71 nssv1587967 S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS38144 nssv1533192 1 1111657 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870892 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS11054 nssv1542974 1 1111657 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870892 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 MS15997 nssv1572103 1 1111657 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870892 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS32888 nsv870892 1 1111657 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv22n71 nssv1533192,nssv1572103,nssv1542974 M 6533 0 3 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 IS32888,MS11054,MS15997 nssv1573413 1 1111657 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871946 "" S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS33361 nsv871946 1 1111657 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv19n71 nssv1573413 S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS33361 nssv1597471 1 1111657 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870474 "" S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS41317 nsv870474 1 1111657 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv20n71 nssv1597471 S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 IS41317 nssv1509705 1 1111887 1404875 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871511 "" S 6533 0 1 ACAP3,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 SP54956 nsv871511 1 1111887 1404875 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv19n71 nssv1509705 S 6533 0 1 ACAP3,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,TTLL10,UBE2J2,VWA1 SP54956 nssv1505907 1 1120590 1180386 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871779 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 SP54043 nsv871779 1 1120590 1180386 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv23n71 nssv1505907 S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,TTLL10,UBE2J2 SP54043 nssv1507389 1 1121065 1132589 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870548 "" S 6533 0 1 TNFRSF18,TTLL10 SP54725 nssv1509034 1 1121065 1145994 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871427 "" S 6533 0 1 SDF4,TNFRSF18,TNFRSF4,TTLL10 SP54684 nssv1511301 1 1121065 1161112 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871680 "" S 6533 0 1 B3GALT6,SDF4,TNFRSF18,TNFRSF4,TTLL10 SP55021 nssv1514000 1 1125105 1132589 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871133 "" S 6533 0 1 TNFRSF18 SP55882 nssv1514261 1 1125105 1139524 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871599 "" S 6533 0 1 TNFRSF18,TNFRSF4 SP55992 nsv871599 1 1125105 1139524 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv24n71 nssv1514261 S 6533 0 1 TNFRSF18,TNFRSF4 SP55992 nssv1510623 1 1125105 1184667 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871345 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,UBE2J2 SP54988 nsv871345 1 1125105 1184667 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv23n71 nssv1510623 S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,UBE2J2 SP54988 nssv1578820 1 1125105 1244704 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871329 "" S 6533 1 0 ACAP3,B3GALT6,CPSF3L,FAM132A,PUSL1,SCNN1D,SDF4,TNFRSF18,TNFRSF4,UBE2J2 IS34912 nssv1552403 1 1125105 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871039 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,UBE2J2 MS19414 nssv1577274 1 1125105 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871039 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,UBE2J2 IS34407 nsv871039 1 1125105 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv22n71 nssv1577274,nssv1552403 M 6533 0 2 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,UBE2J2 IS34407,MS19414 nssv1534416 1 1125105 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870738 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,UBE2J2 MS11579 nssv1535495 1 1125105 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870738 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,UBE2J2 MS12262 nssv1590578 1 1125105 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870738 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,UBE2J2 IS38538 nsv870738 1 1125105 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv22n71 nssv1590578,nssv1534416,nssv1535495 M 6533 0 3 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TNFRSF18,TNFRSF4,UBE2J2 IS38538,MS11579,MS12262 nssv1573159 1 1125105 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871234 "" S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,UBE2J2 IS33248 nsv871234 1 1125105 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv25n71 nssv1573159 S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,TNFRSF18,TNFRSF4,UBE2J2 IS33248 essv54270 1 1126866 1128086 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14081 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19099 essv59675 1 1126866 1128086 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14081 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18523 esv14081 1 1126866 1128146 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv24081 essv47249,essv35996,essv43769,essv54270,essv32490,essv83094,essv77028,essv59675 M 451 8 0 "" NA18511,NA18523,NA18861,NA18907,NA18909,NA19099,NA19147,NA19190 essv43769 1 1126961 1128056 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14081 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18909 essv47249 1 1126961 1128056 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14081 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18861 essv77028 1 1127021 1128056 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14081 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18511 essv32490 1 1127031 1128056 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14081 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19147 essv83094 1 1127031 1128056 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14081 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19190 essv35996 1 1127031 1128146 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14081 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18907 nssv1500201 1 1128776 1142494 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871139 "" S 6533 0 1 SDF4,TNFRSF18,TNFRSF4 SP50159 nsv871139 1 1128776 1142494 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv24n71 nssv1500201 S 6533 0 1 SDF4,TNFRSF18,TNFRSF4 SP50159 nssv1509305 1 1130298 1181733 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871594 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,UBE2J2 SP54782 nsv871594 1 1130298 1181733 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv26n71 nssv1509305 S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF18,TNFRSF4,UBE2J2 SP54782 nssv1518102 1 1130733 1153827 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871512 "" S 6533 0 1 SDF4,TNFRSF18,TNFRSF4 SP57469 essv31773 1 1132571 1133002 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv9332 "" S 1 0 1 "" SJK nssv1507916 1 1132725 1161112 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870938 "" S 6533 0 1 B3GALT6,SDF4,TNFRSF4 SP54725 nsv870938 1 1132725 1161112 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv27n71 nssv1507916 S 6533 0 1 B3GALT6,SDF4,TNFRSF4 SP54725 nssv1501779 1 1135781 1180386 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871051 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF4,UBE2J2 SP51109 nsv871051 1 1135781 1180386 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv26n71 nssv1501779 S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF4,UBE2J2 SP51109 nssv1508984 1 1135781 1181733 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871331 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF4,UBE2J2 SP54672 nsv871331 1 1135781 1181733 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv26n71 nssv1508984 S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF4,UBE2J2 SP54672 nssv1509063 1 1137518 1178043 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870735 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF4 SP54750 nsv870735 1 1137518 1178043 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv26n71 nssv1509063 S 6533 0 1 B3GALT6,FAM132A,SDF4,TNFRSF4 SP54750 nssv1508794 1 1139524 1161112 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870832 "" S 6533 0 1 B3GALT6,SDF4 SP54591 nsv870832 1 1139524 1161112 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv27n71 nssv1508794 S 6533 0 1 B3GALT6,SDF4 SP54591 nssv1519318 1 1139524 1176365 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871142 "" S 6533 0 1 B3GALT6,FAM132A,SDF4 SP81010 nsv871142 1 1139524 1176365 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv26n71 nssv1519318 S 6533 0 1 B3GALT6,FAM132A,SDF4 SP81010 nssv1510486 1 1139524 1181733 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871213 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,UBE2J2 SP54967 nssv1511161 1 1139524 1181733 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871213 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,UBE2J2 SP55019 nsv871213 1 1139524 1181733 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv26n71 nssv1511161,nssv1510486 M 6533 0 2 B3GALT6,FAM132A,SDF4,UBE2J2 SP54967,SP55019 nssv533179 1 1142494 1201155 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv455661 "" S 1557 0 1 B3GALT6,FAM132A,SDF4,UBE2J2 1782681247_A nssv1592082 1 1142494 1229798 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871327 "" S 6533 0 1 ACAP3,B3GALT6,FAM132A,SCNN1D,SDF4,UBE2J2 IS39233 nssv178465 1 1142956 1147823 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159887 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans SDF4 nssv1551379 1 1148140 1278446 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870639 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,UBE2J2 MS18848 nssv1542680 1 1148140 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871666 "" S 6533 0 1 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,UBE2J2 MS15835 nssv1599268 1 1148140 1295424 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871666 "" S 6533 1 0 ACAP3,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,UBE2J2 IS41524 nssv1584116 1 1148140 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871270 "" S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,UBE2J2,VWA1 IS36876 nsv871270 1 1148140 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv25n71 nssv1584116 S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,UBE2J2,VWA1 IS36876 nssv1514262 1 1148494 1180386 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871965 "" S 6533 0 1 B3GALT6,FAM132A,SDF4,UBE2J2 SP55992 nssv547650 1 1152298 1303878 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470680 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ACAP3,AURKAIP1,B3GALT6,CPSF3L,DVL1,FAM132A,GLTPD1,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,UBE2J2 HGDP00978 nssv1531243 1 1153667 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870912 "" S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,UBE2J2,VWA1 MS10386 nsv870912 1 1153667 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv25n71 nssv1531243 S 6533 0 1 ACAP3,AURKAIP1,B3GALT6,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,TAS1R3,TMEM88B,UBE2J2,VWA1 MS10386 nssv1573724 1 1153667 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870753 "" S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,UBE2J2,VWA1 IS33504 nsv870753 1 1153667 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv20n71 nssv1573724 S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,B3GALT6,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,PUSL1,SCNN1D,SDF4,SLC35E2B,SSU72,TAS1R3,TMEM88B,UBE2J2,VWA1 IS33504 nssv1433403 1 1154213 1159633 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv821698 "" S 31 1 0 Samples from several populations that are part of the HapMap project. B3GALT6,SDF4 NA18526 essv92753 1 1156897 1159368 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33767 "" S 51 0 1 B3GALT6,SDF4 21944 essv95205 1 1156897 1159368 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33767 "" S 51 0 1 B3GALT6,SDF4 21721 essv96403 1 1156897 1159368 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33767 "" S 51 0 1 B3GALT6,SDF4 22371 nssv24602 1 1157204 1160623 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. B3GALT6,SDF4 NA12872 nssv28038 1 1157204 1160623 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. B3GALT6,SDF4 NA18504 nssv1585772 1 1166460 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871814 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,UBE2J2,VWA1 IS37646 nsv871814 1 1166460 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv25n71 nssv1585772 S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,FAM132A,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,UBE2J2,VWA1 IS37646 essv27718 1 1173061 1173724 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv5277 "" S 1 0 1 Single Asian sample YH "" YH essv3720664 1 1174236 1174500 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1750792 "" S 2 0 1 "" HuRef nssv1417737 1 1182378 1231947 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv817616 "" S 112 0 1 Samples from several populations that are part of the HapMap project. ACAP3,SCNN1D,UBE2J2 NA19003 nssv1564615 1 1184667 1278446 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871910 "" S 6533 1 0 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 IS30265 nssv1597794 1 1184667 1278446 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871910 "" S 6533 1 0 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 IS41193 nsv871910 1 1184667 1278446 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv28n71 nssv1564615,nssv1597794 M 6533 2 0 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 IS30265,IS41193 nssv1532333 1 1184667 1295424 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870863 "" S 6533 1 0 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 MS10758 nsv870863 1 1184667 1295424 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv28n71 nssv1532333 S 6533 1 0 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 MS10758 essv64 1 1189183 1309735 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv8e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 NA18991 esv462 1 1189183 1309735 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv8e1 "" S 271 ACAP3,AURKAIP1,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 nssv1541080 1 1191495 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871354 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 MS15199 nssv1554206 1 1191495 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871354 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 MS20670 nssv1589727 1 1191495 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871354 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 IS38403 nssv1594370 1 1191495 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871354 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 IS39817 nssv1595632 1 1191495 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871354 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 IS40297 nsv871354 1 1191495 1295424 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv29n71 nssv1541080,nssv1589727,nssv1554206,nssv1595632,nssv1594370 M 6533 0 5 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 IS38403,IS39817,IS40297,MS15199,MS20670 nssv1552754 1 1191495 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871183 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,UBE2J2,VWA1 MS19630 nsv871183 1 1191495 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv25n71 nssv1552754 S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,UBE2J2,VWA1 MS19630 nssv1505908 1 1196206 1239050 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870963 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1,SCNN1D,UBE2J2 SP54043 nssv1509306 1 1196206 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871853 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 SP54782 nssv1515527 1 1196206 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871853 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 SP56223 nssv1518103 1 1196206 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871853 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 SP57469 nsv871853 1 1196206 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv29n71 nssv1518103,nssv1509306,nssv1515527 M 6533 0 3 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3,UBE2J2 SP54782,SP56223,SP57469 nssv1581461 1 1201155 1370430 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870614 "" S 6533 1 0 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS35581 nsv870614 1 1201155 1370430 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv30n71 nssv1581461 S 6533 1 0 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS35581 nssv1572464 1 1201155 1379341 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871493 "" S 6533 1 0 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS33070 nsv871493 1 1201155 1379341 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv30n71 nssv1572464 S 6533 1 0 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS33070 nssv1548182 1 1201155 1389679 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870965 "" S 6533 1 0 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 MS17730 nsv870965 1 1201155 1389679 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv30n71 nssv1548182 S 6533 1 0 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 MS17730 nssv1593702 1 1201155 1452629 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871797 "" S 6533 1 0 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS39494 nsv871797 1 1201155 1452629 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv31n71 nssv1593702 S 6533 1 0 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS39494 nssv1510624 1 1203168 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870586 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3 SP54988 nsv870586 1 1203168 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv29n71 nssv1510624 S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3 SP54988 nssv1566638 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS30835 nssv1566770 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS30923 nssv1572029 1 1209999 1356780 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 1 0 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS32843 nssv1572767 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS33178 nssv1581777 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS35726 nssv1584221 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS36910 nssv1586795 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS37985 nssv1589061 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS38293 nssv1589935 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS38431 nssv1597896 1 1209999 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871460 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS41128 nsv871460 1 1209999 1356780 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv32n71 nssv1597896,nssv1566638,nssv1589935,nssv1584221,nssv1566770,nssv1572029,nssv1581777,nssv1586795,nssv1572767,nssv1589061 M 6533 1 9 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B IS30835,IS30923,IS32843,IS33178,IS35726,IS36910,IS37985,IS38293,IS38431,IS41128 nssv1539387 1 1209999 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870677 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 MS14318 nssv1557257 1 1209999 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870677 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 MS22568 nssv1566845 1 1209999 1370430 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870677 "" S 6533 1 0 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS30953 nssv1573145 1 1209999 1370430 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870677 "" S 6533 1 0 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS33243 nssv1574571 1 1209999 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870677 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS33601 nssv1576246 1 1209999 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870677 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS34005 nssv1592786 1 1209999 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870677 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS39258 nsv870677 1 1209999 1370430 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv32n71 nssv1557257,nssv1573145,nssv1592786,nssv1566845,nssv1576246,nssv1574571,nssv1539387 M 6533 2 5 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS30953,IS33243,IS33601,IS34005,IS39258,MS14318,MS22568 nssv1573311 1 1209999 1379341 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870855 "" S 6533 1 0 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS33263 nssv1575688 1 1209999 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870855 "" S 6533 0 1 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS33797 nssv1586475 1 1209999 1379341 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870855 "" S 6533 1 0 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS37825 nsv870855 1 1209999 1379341 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv32n71 nssv1575688,nssv1586475,nssv1573311 M 6533 2 1 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS33263,IS33797,IS37825 nssv1588973 1 1209999 1452629 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871901 "" S 6533 1 0 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS38271 nsv871901 1 1209999 1452629 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv31n71 nssv1588973 S 6533 1 0 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,TAS1R3,TMEM88B,VWA1 IS38271 nssv1572606 1 1209999 1468043 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870957 "" S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,C1orf70,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SSU72,TAS1R3,TMEM88B,VWA1 IS33162 nsv870957 1 1209999 1468043 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv33n71 nssv1572606 S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,C1orf70,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,SCNN1D,SSU72,TAS1R3,TMEM88B,VWA1 IS33162 nssv1574978 1 1209999 1735586 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870481 "" S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,GLTPD1,GNB1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,NADK,PUSL1,SCNN1D,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,VWA1 IS33684 nsv870481 1 1209999 1735586 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv34n71 nssv1574978 S 6533 0 1 ACAP3,ATAD3A,ATAD3B,ATAD3C,AURKAIP1,C1orf70,CCNL2,CDK11A,CDK11B,CPSF3L,DVL1,GLTPD1,GNB1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,NADK,PUSL1,SCNN1D,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,VWA1 IS33684 nssv1501203 1 1212369 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871895 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1,SCNN1D SP51042 nssv1510487 1 1212369 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871895 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1,SCNN1D SP54967 nsv871895 1 1212369 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv35n71 nssv1501203,nssv1510487 M 6533 0 2 ACAP3,CPSF3L,PUSL1,SCNN1D SP51042,SP54967 nssv1505846 1 1212369 1238194 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870857 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1,SCNN1D SP54042 nsv870857 1 1212369 1238194 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv35n71 nssv1505846 S 6533 0 1 ACAP3,CPSF3L,PUSL1,SCNN1D SP54042 nssv1501974 1 1212369 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871405 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3 SP51109 nssv1511302 1 1212369 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871405 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3 SP55021 nsv871405 1 1212369 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv29n71 nssv1511302,nssv1501974 M 6533 0 2 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,SCNN1D,TAS1R3 SP51109,SP55021 essv42462 1 1213052 1215237 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA18505 essv37720 1 1213422 1215272 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA19257 essv69697 1 1213422 1215402 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA12044 essv43726 1 1213422 1215462 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA18909 essv46716 1 1213422 1215462 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA19129 essv55374 1 1213422 1215462 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA19099 esv20786 1 1213422 1215557 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25372 essv36246,essv43726,essv70683,essv55374,essv46716,essv74636,essv37720,essv52557,essv69697,essv39735,essv75565,essv40210,essv62731,essv42462,essv54093,essv76665 M 451 2 14 SCNN1D NA12004,NA12006,NA12044,NA12287,NA12414,NA12878,NA15510,NA18505,NA18508,NA18511,NA18907,NA18909,NA18916,NA19099,NA19129,NA19257 essv4728356 1 1213431 1215612 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2106414 "" S 1 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA18507 nssv585600 1 1213443 1215496 CNV Gain Kidd et al 2010b 21111241 Read-depth_analysis,Sequence_alignment Capillary nsv499366 "" S 9 1 0 SCNN1D essv54093 1 1213457 1215402 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA18508 essv40210 1 1213457 1215462 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA12878 essv62731 1 1213457 1215462 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 SCNN1D NA15510 essv70683 1 1213457 1215462 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA18916 essv76665 1 1213457 1215462 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA18511 essv39735 1 1213457 1215472 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SCNN1D NA12287 essv74636 1 1213457 1215472 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA12004 essv36246 1 1213457 1215557 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA18907 essv75565 1 1213457 1215912 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SCNN1D NA12414 essv3586753 1 1213507 1215472 CNV Gain Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv1004967 "" S 3 1 0 SCNN1D HuRef essv52557 1 1213507 1215472 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20786 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SCNN1D NA12006 nssv626308 1 1213721 1215484 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv511671 "" S 1 0 1 SCNN1D 1 essv3908676 1 1213810 1214092 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1653789 "" S 2 0 1 SCNN1D HuRef essv4148647 1 1214136 1215179 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1027332 "" S 2 0 1 SCNN1D HuRef essv3960677 1 1215269 1215269 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1323061 "" S 2 1 0 SCNN1D HuRef nssv28940 1 1216860 1223284 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. ACAP3,SCNN1D NA18972 nssv1507510 1 1218034 1239050 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871109 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP54725 nsv871109 1 1218034 1239050 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv36n71 nssv1507510 S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP54725 nssv179528 1 1218975 1218975 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160950 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans ACAP3 nssv1510585 1 1219306 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870813 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP54979 nsv870813 1 1219306 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv36n71 nssv1510585 S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP54979 essv25491 1 1222311 1223087 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv3050 "" S 1 0 1 Single Asian sample YH ACAP3 YH nssv1519319 1 1227692 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871311 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP81010 nsv871311 1 1227692 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv37n71 nssv1519319 S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP81010 nssv1506329 1 1229202 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870796 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP54225 nssv1507984 1 1229202 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870796 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP54577 nssv1508137 1 1229202 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870796 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP54621 nssv1509620 1 1229202 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870796 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP54935 nssv1512161 1 1229202 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870796 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP55318 nsv870796 1 1229202 1236835 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv37n71 nssv1507984,nssv1509620,nssv1508137,nssv1512161,nssv1506329 M 6533 0 5 ACAP3,CPSF3L,PUSL1 SP54225,SP54577,SP54621,SP54935,SP55318 nssv1514669 1 1229202 1238194 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871847 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP56047 nsv871847 1 1229202 1238194 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv37n71 nssv1514669 S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP56047 nssv1514263 1 1229202 1239050 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871899 "" S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP55992 nsv871899 1 1229202 1239050 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv37n71 nssv1514263 S 6533 0 1 ACAP3,CPSF3L,PUSL1 SP55992 nssv1500512 1 1229202 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870491 "" S 6533 0 1 ACAP3,CPSF3L,DVL1,GLTPD1,MXRA8,PUSL1,TAS1R3 SP50159 nssv1567434 1 1231947 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870583 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B IS31082 nssv1568389 1 1231947 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870583 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B IS31282 nssv1569824 1 1231947 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870583 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B IS31728 nssv1574780 1 1231947 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870583 "" S 6533 0 1 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B IS33630 nsv870583 1 1231947 1356780 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv38n71 nssv1567434,nssv1568389,nssv1574780,nssv1569824 M 6533 0 4 ACAP3,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B IS31082,IS31282,IS31728,IS33630 nssv1566665 1 1231947 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871452 "" S 6533 0 1 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B,VWA1 IS30837 nsv871452 1 1231947 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv38n71 nssv1566665 S 6533 0 1 ACAP3,ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,PUSL1,TAS1R3,TMEM88B,VWA1 IS30837 nssv1571721 1 1244704 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870808 "" S 6533 0 1 ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,TAS1R3,TMEM88B,VWA1 IS32803 nsv870808 1 1244704 1379341 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv38n71 nssv1571721 S 6533 0 1 ATAD3C,AURKAIP1,CCNL2,CPSF3L,DVL1,GLTPD1,LOC148413,LOC441869,MRPL20,MXRA8,TAS1R3,TMEM88B,VWA1 IS32803 nssv1508479 1 1248109 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870913 "" S 6533 0 1 CPSF3L,DVL1,GLTPD1,MXRA8,TAS1R3 SP54725 nsv870913 1 1248109 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv39n71 nssv1508479 S 6533 0 1 CPSF3L,DVL1,GLTPD1,MXRA8,TAS1R3 SP54725 nssv1505909 1 1249647 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871211 "" S 6533 0 1 CPSF3L,DVL1,GLTPD1,MXRA8,TAS1R3 SP54043 nssv1507875 1 1249647 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871211 "" S 6533 0 1 CPSF3L,DVL1,GLTPD1,MXRA8,TAS1R3 SP54684 nsv871211 1 1249647 1285186 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv39n71 nssv1505909,nssv1507875 M 6533 0 2 CPSF3L,DVL1,GLTPD1,MXRA8,TAS1R3 SP54043,SP54684 nssv1549595 1 1259586 1483590 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871314 "" S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,AURKAIP1,C1orf70,CCNL2,DVL1,LOC148413,LOC441869,MRPL20,MXRA8,SSU72,TAS1R3,TMEM88B,VWA1 MS18276 nsv871314 1 1259586 1483590 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv33n71 nssv1549595 S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,AURKAIP1,C1orf70,CCNL2,DVL1,LOC148413,LOC441869,MRPL20,MXRA8,SSU72,TAS1R3,TMEM88B,VWA1 MS18276 nssv1592083 1 1259586 1712445 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871002 "" S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,AURKAIP1,C1orf70,CCNL2,CDK11A,CDK11B,DVL1,GNB1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,NADK,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,VWA1 IS39233 nsv871002 1 1259586 1712445 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv34n71 nssv1592083 S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,AURKAIP1,C1orf70,CCNL2,CDK11A,CDK11B,DVL1,GNB1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,MXRA8,NADK,SLC35E2,SLC35E2B,SSU72,TAS1R3,TMEM88B,VWA1 IS39233 nssv626309 1 1275043 1276733 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv511672 "" S 1 0 1 "" 1 essv77749 1 1275203 1276678 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA06985 essv34406 1 1275263 1276678 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18502 essv41760 1 1275263 1276678 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18505 essv43560 1 1275263 1276678 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18909 essv46311 1 1275263 1276678 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19129 essv50204 1 1275263 1276678 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18517 essv53270 1 1275263 1276678 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18508 essv3586390 1 1275263 1276763 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv988609 "" S 3 0 1 "" HuRef essv47575 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18861 essv55653 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19099 essv58568 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19108 essv61574 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12239 essv63174 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 "" NA15510 essv67618 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18858 essv70184 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18916 essv76381 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12414 essv81540 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19242 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19114 esv19242 1 1275263 1276763 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23965 essv47575,essv77749,essv43560,essv70184,essv55653,essv58568,essv81540,essv46311,essv61574,essv76381,essv63174,essv34406,essv41760,essv53270,essv50204,essv67618 M 451 16 0 "" NA06985,NA12239,NA12414,NA15510,NA18502,NA18505,NA18508,NA18517,NA18858,NA18861,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129 essv26261 1 1292241 1292688 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv3820 "" S 1 0 1 Single Asian sample YH "" YH essv32023 1 1292426 1292745 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv9582 "" S 1 0 1 "" SJK nssv1534671 1 1300787 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871837 "" S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,C1orf70,CCNL2,CDK11A,CDK11B,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,SLC35E2B,SSU72,TMEM88B,VWA1 MS11726 nssv1589212 1 1303878 1735586 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871690 "" S 6533 1 0 ATAD3A,ATAD3B,ATAD3C,C1orf70,CCNL2,CDK11A,CDK11B,GNB1,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,NADK,SLC35E2,SLC35E2B,SSU72,TMEM88B,VWA1 IS38315 essv5193104 1 1307160 1307861 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2540358 "" S 1 1 0 "" NA18507 essv3870 1 1314392 2014198 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv9e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. ATAD3A,ATAD3B,ATAD3C,C1orf70,CALML6,CCNL2,CDK11A,CDK11B,GABRD,GNB1,KIAA1751,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,NADK,PRKCZ,SLC35E2,SLC35E2B,SSU72,TMEM52,TMEM88B,VWA1 NA18994 esv532 1 1314392 2014198 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent + Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv9e1 "" S 271 ATAD3A,ATAD3B,ATAD3C,C1orf70,CALML6,CCNL2,CDK11A,CDK11B,GABRD,GNB1,KIAA1751,LOC148413,LOC441869,LOC643988,MIB2,MMP23A,MMP23B,MRPL20,NADK,PRKCZ,SLC35E2,SLC35E2B,SSU72,TMEM52,TMEM88B,VWA1 nssv1501240 1 1328459 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871434 "" S 6533 0 1 LOC441869,MRPL20,TMEM88B,VWA1 SP51109 nsv871434 1 1328459 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv40n71 nssv1501240 S 6533 0 1 LOC441869,MRPL20,TMEM88B,VWA1 SP51109 nssv1507559 1 1331048 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871507 "" S 6533 0 1 LOC441869,MRPL20,TMEM88B,VWA1 SP54591 nssv1508103 1 1331048 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871507 "" S 6533 0 1 LOC441869,MRPL20,TMEM88B,VWA1 SP54593 nssv1509064 1 1331048 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871507 "" S 6533 0 1 LOC441869,MRPL20,TMEM88B,VWA1 SP54750 nssv1510488 1 1331048 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871507 "" S 6533 0 1 LOC441869,MRPL20,TMEM88B,VWA1 SP54967 nssv1511303 1 1331048 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871507 "" S 6533 0 1 LOC441869,MRPL20,TMEM88B,VWA1 SP55021 nsv871507 1 1331048 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv40n71 nssv1507559,nssv1508103,nssv1511303,nssv1510488,nssv1509064 M 6533 0 5 LOC441869,MRPL20,TMEM88B,VWA1 SP54591,SP54593,SP54750,SP54967,SP55021 nssv1505910 1 1331048 1375074 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870455 "" S 6533 0 1 ATAD3C,LOC441869,MRPL20,TMEM88B,VWA1 SP54043 nssv1506330 1 1331048 1375074 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870455 "" S 6533 0 1 ATAD3C,LOC441869,MRPL20,TMEM88B,VWA1 SP54225 nssv1511162 1 1331048 1375074 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870455 "" S 6533 0 1 ATAD3C,LOC441869,MRPL20,TMEM88B,VWA1 SP55019 nsv870455 1 1331048 1375074 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv40n71 nssv1505910,nssv1511162,nssv1506330 M 6533 0 3 ATAD3C,LOC441869,MRPL20,TMEM88B,VWA1 SP54043,SP54225,SP55019 nssv1508222 1 1336997 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870642 "" S 6533 0 1 LOC441869,TMEM88B,VWA1 SP54672 nssv1508378 1 1336997 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870642 "" S 6533 0 1 LOC441869,TMEM88B,VWA1 SP54657 nssv1508799 1 1336997 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870642 "" S 6533 0 1 LOC441869,TMEM88B,VWA1 SP54725 nssv1511724 1 1336997 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870642 "" S 6533 0 1 LOC441869,TMEM88B,VWA1 SP55056 nssv1519320 1 1336997 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870642 "" S 6533 0 1 LOC441869,TMEM88B,VWA1 SP81010 nsv870642 1 1336997 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv40n71 nssv1508799,nssv1508378,nssv1519320,nssv1511724,nssv1508222 M 6533 0 5 LOC441869,TMEM88B,VWA1 SP54657,SP54672,SP54725,SP55056,SP81010 nssv1507553 1 1336997 1375074 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871832 "" S 6533 0 1 ATAD3C,LOC441869,TMEM88B,VWA1 SP54684 nssv1510625 1 1336997 1375074 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871832 "" S 6533 0 1 ATAD3C,LOC441869,TMEM88B,VWA1 SP54988 nsv871832 1 1336997 1375074 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv40n71 nssv1507553,nssv1510625 M 6533 0 2 ATAD3C,LOC441869,TMEM88B,VWA1 SP54684,SP54988 nssv1500230 1 1343243 1370430 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871787 "" S 6533 0 1 LOC441869,TMEM88B,VWA1 SP50159 essv77479 1 1352293 1353399 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10423 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TMEM88B NA06985 esv10423 1 1352293 1353399 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv24333 essv77479 S 451 1 0 TMEM88B NA06985 nssv1505449 1 1366010 1421661 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870939 "" S 6533 1 0 ATAD3B,ATAD3C,VWA1 SP53490 nsv870939 1 1366010 1421661 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv41n71 nssv1505449 S 6533 1 0 ATAD3B,ATAD3C,VWA1 SP53490 nssv558496 1 1374932 1395401 CNV Gain Schuster et al 2010 20164927 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer nsv482135 "" S 1 1 0 ATAD3C KB1 nssv1506744 1 1380486 1429534 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871420 "" S 6533 1 0 ATAD3B,ATAD3C SP54401 nsv871420 1 1380486 1429534 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv41n71 nssv1506744 S 6533 1 0 ATAD3B,ATAD3C SP54401 nssv1510626 1 1389679 1472873 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870563 "" S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,C1orf70,SSU72 SP54988 nsv870563 1 1389679 1472873 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv42n71 nssv1510626 S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,C1orf70,SSU72 SP54988 nssv1567435 1 1389679 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871134 "" S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS31082 nsv871134 1 1389679 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1567435 S 6533 0 1 ATAD3A,ATAD3B,ATAD3C,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS31082 nssv558507 1 1397027 1421444 CNV Gain Schuster et al 2010 20164927 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer nsv482146 "" S 1 1 0 ATAD3B KB1 essv3989689 1 1403212 1403212 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1254392 "" S 2 1 0 ATAD3B HuRef essv47544 1 1404772 1406058 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11756 "" S 451 0 1 Samples from several populations that are part of the HapMap project. ATAD3B NA18861 esv11756 1 1404772 1406058 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25832 essv47544,essv76498,essv60858 M 451 0 3 ATAD3B NA18511,NA18523,NA18861 essv60858 1 1404827 1405727 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11756 "" S 451 0 1 Samples from several populations that are part of the HapMap project. ATAD3B NA18523 essv76498 1 1404882 1406058 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11756 "" S 451 0 1 Samples from several populations that are part of the HapMap project. ATAD3B NA18511 nssv1499675 1 1404962 1441243 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871421 "" S 6533 0 1 ATAD3A,ATAD3B SP50156 nssv1509706 1 1404962 1464030 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871696 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70 SP54956 nssv1569650 1 1407979 1498897 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871029 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,SSU72 IS31656 nsv871029 1 1407979 1498897 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv42n71 nssv1569650 S 6533 0 1 ATAD3A,ATAD3B,C1orf70,SSU72 IS31656 nssv1572030 1 1407979 1610720 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870988 "" S 6533 1 0 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS32843 nssv1574102 1 1407979 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870988 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS33514 nssv1576099 1 1407979 1610720 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870988 "" S 6533 1 0 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS33871 nsv870988 1 1407979 1610720 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv44n71 nssv1576099,nssv1572030,nssv1574102 M 6533 2 1 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS32843,IS33514,IS33871 nssv1574871 1 1407979 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871886 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS33665 nsv871886 1 1407979 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1574871 S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS33665 nssv1584222 1 1407979 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870476 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS36910 nssv1588678 1 1407979 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870476 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS38235 nsv870476 1 1407979 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1584222,nssv1588678 M 6533 0 2 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS36910,IS38235 nssv1541081 1 1415563 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871514 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 MS15199 nssv1569825 1 1415563 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871514 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS31728 nssv1573146 1 1415563 1610720 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871514 "" S 6533 1 0 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS33243 nssv1597667 1 1415563 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871514 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS41243 nssv1599096 1 1415563 1610720 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871514 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS41410 nsv871514 1 1415563 1610720 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv44n71 nssv1541081,nssv1569825,nssv1597667,nssv1573146,nssv1599096 M 6533 1 4 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS31728,IS33243,IS41243,IS41410,MS15199 nssv1580375 1 1415563 1617665 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871781 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS35287 nsv871781 1 1415563 1617665 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1580375 S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS35287 nssv1574781 1 1415563 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870550 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS33630 nssv1581312 1 1415563 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870550 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS35566 nsv870550 1 1415563 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1574781,nssv1581312 M 6533 0 2 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 IS33630,IS35566 nssv1535915 1 1415563 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870996 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 MS12545 nsv870996 1 1415563 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1535915 S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B,SSU72 MS12545 nssv1577275 1 1415563 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870702 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 IS34407 nssv1593360 1 1415563 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870702 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 IS39417 nsv870702 1 1415563 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1593360,nssv1577275 M 6533 0 2 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 IS34407,IS39417 nssv1575689 1 1415563 1712445 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871954 "" S 6533 0 1 ATAD3A,ATAD3B,C1orf70,CDK11A,CDK11B,GNB1,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 IS33797 nssv1428013 1 1433831 1437382 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv821809 "" S 31 1 0 "" AK10 nssv1440791 1 1433831 1453689 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv821920 "" S 31 1 0 Samples from several populations that are part of the HapMap project. ATAD3A NA18969 nssv1585773 1 1437188 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870900 "" S 6533 0 1 ATAD3A,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 IS37646 nsv870900 1 1437188 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1585773 S 6533 0 1 ATAD3A,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 IS37646 nssv558518 1 1437418 1459927 CNV Gain Schuster et al 2010 20164927 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer nsv482157 "" S 1 1 0 ATAD3A KB1 nssv1572768 1 1452629 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870636 "" S 6533 0 1 ATAD3A,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 IS33178 nsv870636 1 1452629 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv43n71 nssv1572768 S 6533 0 1 ATAD3A,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2,SLC35E2B,SSU72 IS33178 nssv1534417 1 1452629 1680910 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871628 "" S 6533 0 1 ATAD3A,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 MS11579 nsv871628 1 1452629 1680910 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv45n71 nssv1534417 S 6533 0 1 ATAD3A,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 MS11579 nssv1558399 1 1452629 1695996 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871540 "" S 6533 1 0 ATAD3A,C1orf70,CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 MS23257 essv3821253 1 1468970 1468970 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1301718 "" S 2 1 0 SSU72 HuRef essv3572228 1 1490872 1490872 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1010850 "" S 3 1 0 SSU72 HuRef nssv1566500 1 1498897 1704871 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870495 "" S 6533 0 1 CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 IS30764 nssv1590111 1 1498897 1704871 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870495 "" S 6533 0 1 CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 IS38463 nssv1591361 1 1498897 1704871 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870495 "" S 6533 0 1 CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 IS38724 nsv870495 1 1498897 1704871 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv45n71 nssv1590111,nssv1591361,nssv1566500 M 6533 0 3 CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 IS30764,IS38463,IS38724 nssv1569139 1 1498897 1712445 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871896 "" S 6533 0 1 CDK11A,CDK11B,GNB1,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 IS31445 nsv871896 1 1498897 1712445 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv45n71 nssv1569139 S 6533 0 1 CDK11A,CDK11B,GNB1,LOC643988,MIB2,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B,SSU72 IS31445 nssv1509707 1 1500664 1634768 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870847 "" S 6533 0 1 CDK11A,CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B SP54956 nssv1501664 1 1516133 1563724 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871940 "" S 6533 0 1 CDK11B,LOC643988,MIB2,MMP23A,MMP23B SP51109 nssv1507456 1 1516133 1563724 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871940 "" S 6533 0 1 CDK11B,LOC643988,MIB2,MMP23A,MMP23B SP54684 nssv1511163 1 1516133 1563724 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871940 "" S 6533 0 1 CDK11B,LOC643988,MIB2,MMP23A,MMP23B SP55019 nssv1508752 1 1516133 1585061 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870887 "" S 6533 0 1 CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B SP54672 nssv1510627 1 1516133 1585061 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870887 "" S 6533 0 1 CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B SP54988 nsv870887 1 1516133 1585061 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv46n71 nssv1508752,nssv1510627 M 6533 0 2 CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B SP54672,SP54988 nssv1505911 1 1516133 1586883 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871681 "" S 6533 0 1 CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B SP54043 nsv871681 1 1516133 1586883 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv46n71 nssv1505911 S 6533 0 1 CDK11B,LOC643988,MIB2,MMP23A,MMP23B,SLC35E2B SP54043 essv3586347 1 1530713 1531833 CNV Gain Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv998174 "" S 3 1 0 "" HuRef essv40494 1 1530793 1531723 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15071 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12878 esv15071 1 1530793 1531833 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23829 essv70538,essv51898,essv40494 M 451 0 3 "" NA12006,NA12878,NA18916 essv51898 1 1530853 1531643 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15071 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12006 essv70538 1 1530923 1531833 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15071 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18916 nssv1434858 1 1542495 1543199 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822031 "" S 31 0 1 Samples from several populations that are part of the HapMap project. MIB2 NA18942 nssv1517021 1 1557334 1634768 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871496 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,MMP23B,SLC35E2B SP57045 nsv871496 1 1557334 1634768 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv47n71 nssv1517021 S 6533 0 1 CDK11A,CDK11B,MMP23A,MMP23B,SLC35E2B SP57045 nssv1512077 1 1557334 1670079 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871583 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,MMP23B,SLC35E2,SLC35E2B SP55277 essv66969 1 1557744 1673566 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17198 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B NA12828 esv17198 1 1557744 1673566 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27786 essv66969 S 451 1 0 CDK11A,CDK11B,MMP23A,MMP23B,NADK,SLC35E2,SLC35E2B NA12828 nssv1507412 1 1563724 1610720 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870539 "" S 6533 1 0 CDK11B,SLC35E2B SP54604 nsv870539 1 1563724 1610720 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv48n71 nssv1507412 S 6533 1 0 CDK11B,SLC35E2B SP54604 nssv1499953 1 1563724 1615647 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871202 "" S 6533 1 0 CDK11B,SLC35E2B SP50521 nssv1517070 1 1563724 1615647 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871202 "" S 6533 1 0 CDK11B,SLC35E2B SP57078 nsv871202 1 1563724 1615647 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv48n71 nssv1517070,nssv1499953 M 6533 2 0 CDK11B,SLC35E2B SP50521,SP57078 nssv1504073 1 1563724 1617847 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871676 "" S 6533 0 1 CDK11B,SLC35E2B SP52175 nssv1500453 1 1563724 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871749 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP50137 nssv1506204 1 1563724 1626497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871749 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP54078 nssv1511892 1 1563724 1626497 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871749 "" S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP55160 nssv1513497 1 1563724 1626497 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871749 "" S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP55789 nssv1517515 1 1563724 1626497 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871749 "" S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP57299 nssv1504984 1 1563724 1634768 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871301 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP52946 nsv871301 1 1563724 1634768 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv47n71 nssv1504984 S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP52946 nssv1502536 1 1563724 1635226 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870598 "" S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP51244 essv4160103 1 1574409 1574409 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1336011 "" S 2 1 0 CDK11B HuRef nssv1435646 1 1575237 1640995 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822142 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,SLC35E2B NA18566 nsv822142 1 1575237 1640995 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv3n67 nssv1435646 S 31 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B NA18566 nssv1436322 1 1575237 1643835 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822253 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,SLC35E2B NA18542 nsv822253 1 1575237 1643835 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv3n67 nssv1436322 S 31 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B NA18542 nssv1423939 1 1575237 1657017 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822364 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B NA18582 nsv822364 1 1575237 1657017 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv3n67 nssv1423939 S 31 1 0 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B NA18582 nssv1502713 1 1585061 1634768 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870658 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP51353 nsv870658 1 1585061 1634768 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv49n71 nssv1502713 S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP51353 nssv1500308 1 1585061 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870974 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP50098 nsv870974 1 1585061 1635226 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv49n71 nssv1500308 S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP50098 nssv1512590 1 1586883 1626497 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870717 "" S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP55558 nsv870717 1 1586883 1626497 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv50n71 nssv1512590 S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP55558 nssv1516131 1 1586883 1643532 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871030 "" S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP56458 essv3827771 1 1588294 1588461 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1758309 "" S 2 0 1 CDK11B,SLC35E2B HuRef nssv1513887 1 1590881 1634768 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871135 "" S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP55864 nsv871135 1 1590881 1634768 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv50n71 nssv1513887 S 6533 1 0 CDK11A,CDK11B,MMP23A,SLC35E2B SP55864 essv28540 1 1605119 1605212 CNV Gain Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv6099 "" S 1 1 0 CDK11B,SLC35E2B SJK nssv1508087 1 1605424 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871217 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B SP54725 nsv871217 1 1605424 1648805 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv51n71 nssv1508087 S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B SP54725 nssv1500068 1 1609404 1643532 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871518 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP50523 nssv1507407 1 1609404 1643532 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871518 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP54561 nssv1508427 1 1609404 1643532 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871518 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP54604 nssv1513249 1 1609404 1643532 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871518 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2B SP55699 nsv871518 1 1609404 1643532 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv51n71 nssv1507407,nssv1508427,nssv1500068,nssv1513249 M 6533 0 4 CDK11A,CDK11B,MMP23A,SLC35E2B SP50523,SP54561,SP54604,SP55699 essv10795 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA18523 essv11223 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA19204 essv11783 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA18504 essv13898 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA18854 essv16833 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA19205 essv16942 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA19144 essv17575 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA12762 essv17964 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA12003 essv1830 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA18976 essv20259 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA12144 essv20567 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA07056 essv21384 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA12740 essv21660 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA12248 essv23336 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA12750 essv23590 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA12006 essv24958 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA10839 essv4042 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA18635 essv5454 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA18632 essv7086 1 1609516 1720123 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv10e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2,SLC35E2B NA18537 nssv26882 1 1610047 1673246 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,NADK,SLC35E2,SLC35E2B NA12740 nssv28542 1 1610047 1673246 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,NADK,SLC35E2,SLC35E2B NA18504 nssv21448 1 1610047 1674936 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,NADK,SLC35E2,SLC35E2B NA19144 nssv26879 1 1610544 1614954 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CDK11B,SLC35E2B NA10863 nssv21436 1 1610544 1674936 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,NADK,SLC35E2,SLC35E2B NA18552 nssv1515693 1 1610720 1670079 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871600 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B SP56248 nsv871600 1 1610720 1670079 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv52n71 nssv1515693 S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2,SLC35E2B SP56248 nssv28029 1 1610958 1616407 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CDK11B,SLC35E2B NA10839 nssv1518023 1 1615647 1674332 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871658 "" S 6533 1 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 SP57443 nsv871658 1 1615647 1674332 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv53n71 nssv1518023 S 6533 1 0 CDK11A,CDK11B,MMP23A,NADK,SLC35E2 SP57443 nssv1532352 1 1617665 1712445 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871560 "" S 6533 0 1 CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2 MS10769 nssv1565133 1 1617665 1712445 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871560 "" S 6533 0 1 CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2 IS30369 nssv1511696 1 1617847 1670079 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870509 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2 SP55034 nssv1515105 1 1617847 1670079 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870509 "" S 6533 0 1 CDK11A,CDK11B,MMP23A,SLC35E2 SP56125 nsv870509 1 1617847 1670079 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv52n71 nssv1515105,nssv1511696 M 6533 0 2 CDK11A,CDK11B,MMP23A,SLC35E2 SP55034,SP56125 nssv466028 1 1619478 1674040 CNV Deletion Korbel et al 2007 17901297 FISH,Oligo_aCGH,PCR,Sequencing 454 nsv436343 "" S 2 0 1 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,MMP23A,NADK,SLC35E2 NA18505 nssv1443851 1 1622658 1801937 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834091 "" S 95 0 1 CDK11A,CDK11B,GNB1,MMP23A,NADK,SLC35E2 nssv558529 1 1624030 1645651 CNV Gain Schuster et al 2010 20164927 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer nsv482168 "" S 1 1 0 CDK11A,CDK11B KB1 nssv1439447 1 1624860 1670445 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822475 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,SLC35E2 NA18537 nssv1438578 1 1625061 1640673 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822586 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B NA18973 nssv1422355 1 1625065 1657017 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822697 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,SLC35E2 NA18552 nssv1504111 1 1626497 1673425 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871903 "" S 6533 0 1 CDK11A,CDK11B,NADK,SLC35E2 SP52231 nssv1504455 1 1626497 1673425 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871903 "" S 6533 1 0 CDK11A,CDK11B,NADK,SLC35E2 SP52497 nssv1501052 1 1626497 1674332 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870726 "" S 6533 0 1 CDK11A,CDK11B,NADK,SLC35E2 SP50832 nsv870726 1 1626497 1674332 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv52n71 nssv1501052 S 6533 0 1 CDK11A,CDK11B,NADK,SLC35E2 SP50832 nssv1519058 1 1626497 1675900 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871220 "" S 6533 1 0 CDK11A,CDK11B,NADK,SLC35E2 SP80936 nsv871220 1 1626497 1675900 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv53n71 nssv1519058 S 6533 1 0 CDK11A,CDK11B,NADK,SLC35E2 SP80936 nssv1564211 1 1626497 1735586 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871121 "" S 6533 1 0 CDK11A,CDK11B,GNB1,NADK,SLC35E2 IS30180 nssv28946 1 1636030 1650246 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,SLC35E2 NA19173 nssv28533 1 1636030 1659492 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B,SLC35E2 NA10839 nssv1431056 1 1637729 1657017 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822809 "" S 31 0 1 CDK11A,CDK11B,SLC35E2 AK18 nssv623768 1 1638191 1638191 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509368 "" S 4 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B NA18994 nssv466139 1 1638486 1638555 CNV Insertion Korbel et al 2007 17901297 FISH,Oligo_aCGH,PCR,Sequencing 454 nsv436733 "" S 2 1 0 Samples from several populations that are part of the HapMap project. CDK11A,CDK11B NA18505 nssv178416 1 1638886 1638936 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159838 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans CDK11A,CDK11B essv3570116 1 1638911 1638961 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv988165 "" S 3 0 1 CDK11A,CDK11B HuRef essv4050580 1 1638923 1638974 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1455500 "" S 2 0 1 CDK11A,CDK11B HuRef nssv179074 1 1638954 1639004 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160496 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans CDK11A,CDK11B nssv178640 1 1639576 1640537 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160062 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans CDK11A,CDK11B essv28547 1 1639919 1640397 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv6106 "" S 1 0 1 CDK11A,CDK11B SJK nssv178736 1 1640463 1640463 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160158 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans CDK11A,CDK11B nssv28031 1 1663794 1670474 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. SLC35E2 NA10863 nssv28921 1 1664225 1670474 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10161 "" S 31 0 1 Samples from several populations that are part of the HapMap project. SLC35E2 NA10839 essv3785632 1 1670927 1670927 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1736683 "" S 2 1 0 "" HuRef nssv1509708 1 1674332 1708295 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870637 "" S 6533 0 1 GNB1,NADK SP54956 nssv1518104 1 1686519 1704871 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871332 "" S 6533 0 1 NADK SP57469 nsv871332 1 1686519 1704871 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv54n71 nssv1518104 S 6533 0 1 NADK SP57469 nssv1505912 1 1686519 1706586 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871040 "" S 6533 0 1 GNB1,NADK SP54043 nsv871040 1 1686519 1706586 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv54n71 nssv1505912 S 6533 0 1 GNB1,NADK SP54043 nssv1443962 1 1734770 1923265 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834335 "" S 95 0 1 CALML6,GNB1,KIAA1751,TMEM52 essv5309496 1 1760874 1767320 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2619193 "" S 1 0 1 GNB1 NA18507 nssv1530401 1 1799950 2041373 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871662 "" S 6533 0 1 CALML6,GABRD,GNB1,KIAA1751,PRKCZ,TMEM52 MS10311 nsv871662 1 1799950 2041373 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv55n71 nssv1530401 S 6533 0 1 CALML6,GABRD,GNB1,KIAA1751,PRKCZ,TMEM52 MS10311 nssv1549596 1 1799950 2277476 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871575 "" S 6533 0 1 C1orf86,CALML6,GABRD,GNB1,KIAA1751,LOC100129534,MORN1,PRKCZ,SKI,TMEM52 MS18276 nsv871575 1 1799950 2277476 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv56n71 nssv1549596 S 6533 0 1 C1orf86,CALML6,GABRD,GNB1,KIAA1751,LOC100129534,MORN1,PRKCZ,SKI,TMEM52 MS18276 nssv1509709 1 1803260 1841994 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871672 "" S 6533 0 1 CALML6,GNB1,TMEM52 SP54956 nssv1510628 1 1807989 1833906 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871204 "" S 6533 0 1 GNB1 SP54988 nssv18097 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA11830 nssv21422 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA07029 nssv21425 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA10847 nssv21432 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA18502 nssv21434 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA18517 nssv21437 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA18563 nssv21440 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA18853 nssv24607 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA18552 nssv24617 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA19007 nssv24619 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA19144 nssv26884 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA12872 nssv28028 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA07048 nssv28034 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA12740 nssv28044 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA18572 nssv28535 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA10863 nssv28930 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA18504 nssv29276 1 1810314 1813172 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10272 "" S 31 1 0 Samples from several populations that are part of the HapMap project. GNB1 NA19173 nssv1546432 1 1833906 1982608 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870914 "" S 6533 0 1 CALML6,GABRD,KIAA1751,PRKCZ,TMEM52 MS17208 nssv24603 1 1836475 1849741 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10383 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CALML6,TMEM52 NA18502 nssv1584757 1 1849509 2030796 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871951 "" S 6533 0 1 GABRD,KIAA1751,PRKCZ IS37172 nsv871951 1 1849509 2030796 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv55n71 nssv1584757 S 6533 0 1 GABRD,KIAA1751,PRKCZ IS37172 nssv1532353 1 1849509 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870691 "" S 6533 0 1 C1orf86,GABRD,KIAA1751,LOC100129534,MORN1,PRKCZ,SKI MS10769 nsv870691 1 1849509 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv56n71 nssv1532353 S 6533 0 1 C1orf86,GABRD,KIAA1751,LOC100129534,MORN1,PRKCZ,SKI MS10769 essv5262341 1 1850375 1850824 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2587332 "" S 1 1 0 "" NA18507 nssv625333 1 1850584 1850724 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512709 "" S 1 1 0 "" 1 essv29185 1 1856157 1856942 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv6744 "" S 1 0 1 "" SJK essv27862 1 1856164 1857032 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv5421 "" S 1 0 1 Single Asian sample YH "" YH nssv1444073 1 1881903 2077734 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834446 "" S 95 0 1 GABRD,KIAA1751,PRKCZ essv4505691 1 1889056 1889385 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2381744 "" S 1 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA18507 essv75742 1 1900207 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA12414 essv79252 1 1900237 1901167 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA12749 essv48708 1 1900237 1901227 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA07037 essv66908 1 1900237 1901227 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA12828 essv32985 1 1900237 1901327 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA19147 essv48101 1 1900237 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA18861 essv56340 1 1900237 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA12776 essv62110 1 1900237 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA12239 essv63059 1 1900237 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 KIAA1751 NA15510 essv73527 1 1900237 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA12156 essv82009 1 1900237 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA19114 esv21134 1 1900237 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25575 essv48101,essv77989,essv48708,essv82009,essv32985,essv57530,essv73527,essv62110,essv75742,essv79252,essv56340,essv66908,essv40160,essv63059,essv67883 M 451 0 15 KIAA1751 NA06985,NA07037,NA11993,NA12156,NA12239,NA12414,NA12749,NA12776,NA12828,NA12878,NA15510,NA18858,NA18861,NA19114,NA19147 essv70879 1 1900237 1903790 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17032 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA18916 esv17032 1 1900237 1903790 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25575 essv70879,essv69724 M 451 0 2 KIAA1751 NA12044,NA18916 essv57530 1 1900297 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA11993 essv40160 1 1900357 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA12878 essv67883 1 1900357 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA18858 essv77989 1 1900357 1901777 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21134 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA06985 essv69724 1 1900357 1903685 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17032 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA12044 essv3586225 1 1902795 1903600 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv994854 "" S 3 0 1 KIAA1751 HuRef essv42280 1 1902795 1903600 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13192 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA18505 essv49885 1 1902795 1903600 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13192 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA18517 essv83274 1 1902795 1903600 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13192 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KIAA1751 NA19190 essv45016 1 1902795 1903685 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13192 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KIAA1751 NA12489 essv37661 1 1902795 1903790 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13192 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIAA1751 NA19257 esv13192 1 1902795 1903790 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25575 essv83274,essv37661,essv45016,essv42280,essv49885 M 451 2 3 KIAA1751 NA12489,NA18505,NA18517,NA19190,NA19257 essv4312046 1 1903185 1903185 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1576320 "" S 2 1 0 KIAA1751 HuRef nssv1574572 1 1906447 2030796 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871003 "" S 6533 0 1 GABRD,KIAA1751,PRKCZ IS33601 nsv871003 1 1906447 2030796 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv57n71 nssv1574572 S 6533 0 1 GABRD,KIAA1751,PRKCZ IS33601 essv4140788 1 1915018 1915018 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1718201 "" S 2 1 0 KIAA1751 HuRef nssv1510629 1 1936451 1980874 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870670 "" S 6533 0 1 GABRD,PRKCZ SP54988 nsv870670 1 1936451 1980874 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv58n71 nssv1510629 S 6533 0 1 GABRD,PRKCZ SP54988 nssv1571441 1 1936451 2058766 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871212 "" S 6533 0 1 GABRD,PRKCZ IS32737 nsv871212 1 1936451 2058766 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv57n71 nssv1571441 S 6533 0 1 GABRD,PRKCZ IS32737 nssv1508964 1 1938861 1977663 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871308 "" S 6533 0 1 GABRD,PRKCZ SP54725 nsv871308 1 1938861 1977663 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv58n71 nssv1508964 S 6533 0 1 GABRD,PRKCZ SP54725 nssv1538559 1 1938861 2145729 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871701 "" S 6533 0 1 C1orf86,GABRD,PRKCZ MS13770 nssv1436323 1 1978127 1980416 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv822920 "" S 31 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA18542 nssv1058 1 1984593 2010920 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2520 "" S 9 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA19240 nssv619761 1 1993610 2052048 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509479 "" S 4 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA10860 nssv1572607 1 1995968 2063411 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871663 "" S 6533 0 1 PRKCZ IS33162 essv3575233 1 2006889 2006889 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1002714 "" S 3 1 0 PRKCZ HuRef essv3941411 1 2007081 2007081 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1162822 "" S 2 1 0 PRKCZ HuRef nssv7778 1 2012604 2046812 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv3631 "" S 9 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA12156 nssv547651 1 2013924 2103425 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470681 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PRKCZ HGDP00697 essv65085 1 2014403 2017248 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16667 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA19240 esv16667 1 2014403 2017263 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27078 essv65085,essv53778 M 451 0 2 PRKCZ NA18508,NA19240 essv53778 1 2014457 2017263 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16667 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18508 nssv1546433 1 2023116 2272977 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871399 "" S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI MS17208 essv27200 1 2027516 2028082 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv4759 "" S 1 0 1 Single Asian sample YH PRKCZ YH essv4990169 1 2027609 2028049 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2345828 "" S 1 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18507 esv2345828 1 2027609 2028049 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer dgv1e194 essv4990169 S 1 0 1 PRKCZ NA18507 essv4969560 1 2027655 2028133 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1927480 "" S 1 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18507 esv1927480 1 2027655 2028133 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer dgv1e194 essv4969560 S 1 0 1 PRKCZ NA18507 nssv178638 1 2028171 2028171 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160060 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans PRKCZ nssv537157 1 2030796 2079386 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460616 "" S 1557 0 1 PRKCZ NINDS_69 essv4845456 1 2031279 2031631 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2196740 "" S 1 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18507 nssv1444184 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1444295 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1444406 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1444517 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1444628 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1444739 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1444851 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1444962 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1445073 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1445184 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI nssv1445295 1 2038930 2232403 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834557 "" S 95 0 1 C1orf86,PRKCZ,SKI essv5343806 1 2042381 2042872 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2492368 "" S 1 1 0 PRKCZ NA18507 essv54090 1 2042821 2045670 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA18508 essv66385 1 2042821 2045670 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA19240 essv45323 1 2042821 2045750 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA19129 esv18512 1 2042821 2045835 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26913 essv47090,essv78063,essv35922,essv48190,essv43794,essv55134,essv64379,essv58106,essv82459,essv45323,essv50820,essv32290,essv71938,essv66385,essv75165,essv38778,essv52243,essv39216,essv44405,essv67378,essv40301,essv54090,essv76728,essv49519,essv59580,essv67764 M 451 6 20 PRKCZ NA06985,NA07037,NA07045,NA11931,NA12004,NA12006,NA12287,NA12489,NA12828,NA12878,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 nssv1420402 1 2042821 2045905 CNV Deletion Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv821592 "" S 1 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA10851 essv40301 1 2042947 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA12878 essv47090 1 2042947 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18861 essv38778 1 2042947 2045670 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA19257 essv43794 1 2042947 2045670 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18909 essv49519 1 2042947 2045670 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18517 essv59580 1 2042947 2045670 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18523 essv67764 1 2042947 2045670 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18858 essv35922 1 2042947 2045750 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18907 essv71938 1 2042947 2045835 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA19225 essv32290 1 2042947 2045905 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA19147 essv82459 1 2042947 2045905 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA19114 essv39216 1 2043042 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA12287 essv48190 1 2043042 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA07037 essv52243 1 2043042 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA12006 essv55134 1 2043042 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA19099 essv64379 1 2043042 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA07045 essv67378 1 2043042 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA12828 essv75165 1 2043042 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA12004 essv76728 1 2043042 2045420 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18511 essv5233482 1 2043244 2045972 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2505453 "" S 1 0 1 PRKCZ NA18507 essv50820 1 2043323 2045420 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA11931 essv78063 1 2043323 2045420 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA06985 essv27282 1 2043376 2045793 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv4841 "" S 1 0 1 Single Asian sample YH PRKCZ YH essv58106 1 2043483 2045420 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA19108 essv3586410 1 2043483 2045670 CNV Gain Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv1008133 "" S 3 1 0 PRKCZ HuRef essv44405 1 2043618 2045420 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18512 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA12489 essv3618162 1 2044405 2044513 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1138741 "" S 2 0 1 PRKCZ HuRef essv83229 1 2044817 2045670 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15600 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA19190 esv15600 1 2044817 2045670 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26913 essv83229 S 451 1 0 PRKCZ NA19190 nssv1519759 1 2047883 2086498 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870901 "" S 6533 1 0 PRKCZ SP50544 nssv1573312 1 2047883 2163364 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870615 "" S 6533 1 0 C1orf86,PRKCZ,SKI IS33263 nssv619762 1 2052048 2098297 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509479 "" S 4 1 0 Samples from several populations that are part of the HapMap project. PRKCZ NA10860 nssv1509710 1 2059960 2165898 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870529 "" S 6533 0 1 C1orf86,PRKCZ,SKI SP54956 nsv870529 1 2059960 2165898 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv59n71 nssv1509710 S 6533 0 1 C1orf86,PRKCZ,SKI SP54956 essv4884634 1 2063576 2063899 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2313378 "" S 1 0 1 Samples from several populations that are part of the HapMap project. PRKCZ NA18507 essv26735 1 2063591 2063822 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv4294 "" S 1 0 1 Single Asian sample YH PRKCZ YH nssv1572608 1 2068971 2145729 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871955 "" S 6533 0 1 C1orf86,PRKCZ IS33162 nsv871955 1 2068971 2145729 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv59n71 nssv1572608 S 6533 0 1 C1orf86,PRKCZ IS33162 nssv538084 1 2072349 2172330 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv461727 "" S 1557 0 1 C1orf86,PRKCZ,SKI 1780862101_A nssv1573040 1 2086498 2170384 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870713 "" S 6533 0 1 C1orf86,PRKCZ,SKI IS33239 nssv1593361 1 2086498 2170384 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870713 "" S 6533 0 1 C1orf86,PRKCZ,SKI IS39417 nsv870713 1 2086498 2170384 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv60n71 nssv1593361,nssv1573040 M 6533 0 2 C1orf86,PRKCZ,SKI IS33239,IS39417 nssv1598796 1 2086498 2201709 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871410 "" S 6533 0 1 C1orf86,PRKCZ,SKI IS41243 nsv871410 1 2086498 2201709 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv61n71 nssv1598796 S 6533 0 1 C1orf86,PRKCZ,SKI IS41243 nssv1531906 1 2086498 2210509 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871855 "" S 6533 0 1 C1orf86,PRKCZ,SKI MS10698 nssv1572104 1 2086498 2210509 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871855 "" S 6533 0 1 C1orf86,PRKCZ,SKI IS32888 nsv871855 1 2086498 2210509 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv61n71 nssv1531906,nssv1572104 M 6533 0 2 C1orf86,PRKCZ,SKI IS32888,MS10698 nssv1599350 1 2086498 2212443 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871463 "" S 6533 0 1 C1orf86,PRKCZ,SKI IS41634 nsv871463 1 2086498 2212443 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv61n71 nssv1599350 S 6533 0 1 C1orf86,PRKCZ,SKI IS41634 nssv1570667 1 2086498 2272977 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871721 "" S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS32322 nsv871721 1 2086498 2272977 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv62n71 nssv1570667 S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS32322 nssv1530402 1 2086498 2277476 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871631 "" S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI MS10311 nsv871631 1 2086498 2277476 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv62n71 nssv1530402 S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI MS10311 nssv1571442 1 2086498 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871167 "" S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS32737 nsv871167 1 2086498 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv62n71 nssv1571442 S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS32737 nssv1573725 1 2086498 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870623 "" S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS33504 nssv1576247 1 2086498 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870623 "" S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS34005 nsv870623 1 2086498 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv62n71 nssv1573725,nssv1576247 M 6533 0 2 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS33504,IS34005 nssv1571839 1 2086498 2300053 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871127 "" S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS32841 nsv871127 1 2086498 2300053 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv62n71 nssv1571839 S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS32841 nssv1575690 1 2103425 2170384 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871059 "" S 6533 0 1 C1orf86,PRKCZ,SKI IS33797 nsv871059 1 2103425 2170384 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv60n71 nssv1575690 S 6533 0 1 C1orf86,PRKCZ,SKI IS33797 nssv1580798 1 2103425 2201709 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871318 "" S 6533 0 1 C1orf86,PRKCZ,SKI IS35484 nsv871318 1 2103425 2201709 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv61n71 nssv1580798 S 6533 0 1 C1orf86,PRKCZ,SKI IS35484 nssv1574979 1 2103425 2272977 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870833 "" S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS33684 nsv870833 1 2103425 2272977 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv62n71 nssv1574979 S 6533 0 1 C1orf86,LOC100129534,MORN1,PRKCZ,SKI IS33684 nssv1510630 1 2108199 2157009 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871884 "" S 6533 0 1 C1orf86,SKI SP54988 nsv871884 1 2108199 2157009 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv63n71 nssv1510630 S 6533 0 1 C1orf86,SKI SP54988 nssv1511164 1 2109693 2157009 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871247 "" S 6533 0 1 C1orf86,SKI SP55019 nsv871247 1 2109693 2157009 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv63n71 nssv1511164 S 6533 0 1 C1orf86,SKI SP55019 nssv1511304 1 2109693 2163364 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871163 "" S 6533 0 1 C1orf86,SKI SP55021 nsv871163 1 2109693 2163364 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv63n71 nssv1511304 S 6533 0 1 C1orf86,SKI SP55021 nssv547657 1 2109693 2194650 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470682 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf86,SKI HGDP00546 nssv1569651 1 2109693 2210509 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871614 "" S 6533 0 1 C1orf86,SKI IS31656 nsv871614 1 2109693 2210509 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv61n71 nssv1569651 S 6533 0 1 C1orf86,SKI IS31656 nssv1533730 1 2109693 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871357 "" S 6533 0 1 C1orf86,MORN1,SKI MS11306 nssv1599097 1 2109693 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871357 "" S 6533 0 1 C1orf86,MORN1,SKI IS41410 nsv871357 1 2109693 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv62n71 nssv1533730,nssv1599097 M 6533 0 2 C1orf86,MORN1,SKI IS41410,MS11306 nssv1505913 1 2111438 2153976 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870629 "" S 6533 0 1 C1orf86,SKI SP54043 nsv870629 1 2111438 2153976 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv63n71 nssv1505913 S 6533 0 1 C1orf86,SKI SP54043 nssv1417805 1 2130121 2146222 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818111 "" S 112 0 1 Samples from several populations that are part of the HapMap project. "" NA18853 nssv539962 1 2130121 2184977 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv463949 "" S 1557 0 1 SKI 1780862414_A nssv547652 1 2136826 2253748 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470682 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations MORN1,SKI HGDP00288 nssv1445406 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1445517 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1445628 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1445739 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1445850 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1445962 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446073 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446184 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446295 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446406 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446517 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446628 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446739 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446850 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1446961 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447073 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447184 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447295 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447406 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447517 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447628 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447739 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447850 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1447961 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448072 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448184 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448295 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448406 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448517 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448628 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448739 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448850 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1448961 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449072 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449183 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449295 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449406 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449517 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449628 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449739 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449850 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1449961 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1450072 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1450183 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1450294 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1450406 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1450517 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI nssv1450628 1 2145626 2314237 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv834668 "" S 95 0 1 LOC100129534,MORN1,RER1,SKI essv5208944 1 2148325 2150352 CNV Loss McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2648351 "" S 1 0 1 SKI NA18507 nssv540916 1 2170384 2210509 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv465060 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations SKI HGDP01351 nssv1585774 1 2172330 2497275 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871321 "" S 6533 0 1 HES5,LOC100129534,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,SKI,TNFRSF14 IS37646 nsv871321 1 2172330 2497275 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv64n71 nssv1585774 S 6533 0 1 HES5,LOC100129534,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,SKI,TNFRSF14 IS37646 nssv1590915 1 2182293 2224492 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870822 "" S 6533 1 0 SKI IS38603 nssv1576872 1 2182293 2259808 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870750 "" S 6533 0 1 MORN1,SKI IS34304 nsv870750 1 2182293 2259808 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv65n71 nssv1576872 S 6533 0 1 MORN1,SKI IS34304 nssv1589062 1 2184977 2221455 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870836 "" S 6533 0 1 SKI IS38293 nsv870836 1 2184977 2221455 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv66n71 nssv1589062 S 6533 0 1 SKI IS38293 nssv1567436 1 2184977 2251082 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870732 "" S 6533 0 1 MORN1,SKI IS31082 nssv1593362 1 2184977 2251082 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870732 "" S 6533 0 1 MORN1,SKI IS39417 nsv870732 1 2184977 2251082 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv65n71 nssv1567436,nssv1593362 M 6533 0 2 MORN1,SKI IS31082,IS39417 nssv1572609 1 2184977 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870758 "" S 6533 0 1 MORN1,SKI IS33162 nsv870758 1 2184977 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv65n71 nssv1572609 S 6533 0 1 MORN1,SKI IS33162 nssv1543339 1 2184977 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871093 "" S 6533 0 1 LOC100129534,MORN1,SKI MS16153 nssv1596024 1 2184977 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871093 "" S 6533 0 1 LOC100129534,MORN1,SKI IS40396 nsv871093 1 2184977 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv65n71 nssv1596024,nssv1543339 M 6533 0 2 LOC100129534,MORN1,SKI IS40396,MS16153 nssv1592084 1 2184977 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871383 "" S 6533 0 1 HES5,LOC100129534,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,SKI,TNFRSF14 IS39233 nsv871383 1 2184977 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv64n71 nssv1592084 S 6533 0 1 HES5,LOC100129534,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,SKI,TNFRSF14 IS39233 nssv705251 1 2188917 2201709 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv528621 "" S 2026 0 1 SKI nssv1578967 1 2188917 2226557 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870681 "" S 6533 0 1 SKI IS35007 nsv870681 1 2188917 2226557 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv66n71 nssv1578967 S 6533 0 1 SKI IS35007 nssv547654 1 2188917 2253748 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470682 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations MORN1,SKI HGDP00657 nssv547655 1 2188917 2253748 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470682 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations MORN1,SKI HGDP00978 nssv1533516 1 2188917 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870982 "" S 6533 0 1 MORN1,SKI MS11237 nsv870982 1 2188917 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv65n71 nssv1533516 S 6533 0 1 MORN1,SKI MS11237 nssv547653 1 2188917 2300053 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470682 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations LOC100129534,MORN1,SKI HGDP00313 nssv1588679 1 2192634 2224492 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871845 "" S 6533 0 1 SKI IS38235 nssv1589728 1 2192634 2224492 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871845 "" S 6533 0 1 SKI IS38403 nsv871845 1 2192634 2224492 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv66n71 nssv1589728,nssv1588679 M 6533 0 2 SKI IS38235,IS38403 nssv1574103 1 2192634 2259808 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870785 "" S 6533 0 1 MORN1,SKI IS33514 nsv870785 1 2192634 2259808 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv65n71 nssv1574103 S 6533 0 1 MORN1,SKI IS33514 nssv1582851 1 2192634 2270521 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870904 "" S 6533 1 0 MORN1,SKI IS36183 essv39656 1 2201780 2203800 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SKI NA12287 essv62157 1 2201920 2203705 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA12239 essv53616 1 2201920 2203750 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SKI NA18508 essv43954 1 2201920 2203800 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA18909 essv50429 1 2201920 2203800 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SKI NA18517 essv52735 1 2201920 2203800 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 1 0 Samples from several populations that are part of the HapMap project. SKI NA12006 essv57001 1 2201920 2203800 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA11993 essv66020 1 2201920 2203800 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA19240 essv70976 1 2201920 2203800 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA18916 essv77821 1 2201920 2203800 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA06985 essv58481 1 2201920 2204035 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA19108 esv20675 1 2201920 2204035 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv22780 essv77821,essv43954,essv70976,essv58481,essv51047,essv57001,essv66020,essv38580,essv52735,essv62157,essv39656,essv53616,essv50429,essv59866 M 451 4 10 SKI NA06985,NA11931,NA11993,NA12006,NA12239,NA12287,NA18508,NA18517,NA18523,NA18909,NA18916,NA19108,NA19240,NA19257 essv3979301 1 2202020 2202233 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1252402 "" S 2 0 1 SKI HuRef essv51047 1 2202050 2203800 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA11931 essv59866 1 2202050 2204035 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA18523 essv3775323 1 2202501 2202588 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1536883 "" S 2 0 1 SKI HuRef essv38580 1 2202540 2203800 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20675 "" S 451 0 1 Samples from several populations that are part of the HapMap project. SKI NA19257 essv4025462 1 2202650 2202865 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1025209 "" S 2 0 1 SKI HuRef nssv1590579 1 2202780 2271586 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871952 "" S 6533 0 1 MORN1,SKI IS38538 nsv871952 1 2202780 2271586 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv67n71 nssv1590579 S 6533 0 1 MORN1,SKI IS38538 essv4061538 1 2202878 2203136 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1682069 "" S 2 0 1 SKI HuRef essv3589181 1 2203161 2203247 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1164473 "" S 2 0 1 SKI HuRef nssv1584758 1 2212443 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870532 "" S 6533 0 1 LOC100129534,MORN1,SKI IS37172 nsv870532 1 2212443 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv67n71 nssv1584758 S 6533 0 1 LOC100129534,MORN1,SKI IS37172 nssv1544210 1 2213726 2277476 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870783 "" S 6533 0 1 LOC100129534,MORN1,SKI MS16315 nsv870783 1 2213726 2277476 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv67n71 nssv1544210 S 6533 0 1 LOC100129534,MORN1,SKI MS16315 nssv1576405 1 2214736 2272977 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871289 "" S 6533 0 1 LOC100129534,MORN1,SKI IS34057 nsv871289 1 2214736 2272977 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv67n71 nssv1576405 S 6533 0 1 LOC100129534,MORN1,SKI IS34057 nssv1595345 1 2214736 2277476 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871941 "" S 6533 0 1 LOC100129534,MORN1,SKI IS40230 nsv871941 1 2214736 2277476 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv67n71 nssv1595345 S 6533 0 1 LOC100129534,MORN1,SKI IS40230 nssv1565134 1 2214736 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870888 "" S 6533 0 1 LOC100129534,MORN1,SKI IS30369 nssv1573041 1 2214736 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870888 "" S 6533 0 1 LOC100129534,MORN1,SKI IS33239 nsv870888 1 2214736 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv67n71 nssv1573041,nssv1565134 M 6533 0 2 LOC100129534,MORN1,SKI IS30369,IS33239 nssv1531907 1 2214736 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870997 "" S 6533 0 1 LOC100129534,MORN1,SKI MS10698 nsv870997 1 2214736 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv67n71 nssv1531907 S 6533 0 1 LOC100129534,MORN1,SKI MS10698 nssv1529769 1 2214736 2304179 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870515 "" S 6533 0 1 LOC100129534,MORN1,SKI MS10123 nssv1426364 1 2224073 2256165 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823031 "" S 31 1 0 MORN1,SKI AK6 nssv1547667 1 2224492 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870610 "" S 6533 0 1 LOC100129534,MORN1,SKI MS17522 nsv870610 1 2224492 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv68n71 nssv1547667 S 6533 0 1 LOC100129534,MORN1,SKI MS17522 nssv1507391 1 2225591 2247587 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871848 "" S 6533 0 1 MORN1,SKI SP54725 nssv1509711 1 2225591 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871765 "" S 6533 0 1 LOC100129534,MORN1,SKI SP54956 nsv871765 1 2225591 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv68n71 nssv1509711 S 6533 0 1 LOC100129534,MORN1,SKI SP54956 nssv10842 1 2226024 2241765 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv4742 "" S 9 1 0 Samples from several populations that are part of the HapMap project. SKI NA18956 nssv1510631 1 2226557 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871489 "" S 6533 0 1 LOC100129534,MORN1,SKI SP54988 nsv871489 1 2226557 2279181 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv68n71 nssv1510631 S 6533 0 1 LOC100129534,MORN1,SKI SP54988 nssv1574573 1 2226557 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871652 "" S 6533 0 1 LOC100129534,MORN1,SKI IS33601 nsv871652 1 2226557 2281540 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv68n71 nssv1574573 S 6533 0 1 LOC100129534,MORN1,SKI IS33601 nssv1573519 1 2226557 2369108 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871930 "" S 6533 0 1 LOC100129534,MORN1,PEX10,RER1,SKI IS33455 nssv1440111 1 2227388 2231479 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823142 "" S 31 1 0 Samples from several populations that are part of the HapMap project. SKI NA18564 nsv823142 1 2227388 2231479 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv4n67 nssv1440111 S 31 1 0 SKI NA18564 nssv1440792 1 2227950 2231840 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823253 "" S 31 1 0 Samples from several populations that are part of the HapMap project. SKI NA18969 nsv823253 1 2227950 2231840 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv4n67 nssv1440792 S 31 1 0 SKI NA18969 nssv1437213 1 2228155 2230862 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823364 "" S 31 1 0 Samples from several populations that are part of the HapMap project. SKI NA18949 nssv1428813 1 2228155 2231479 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823475 "" S 31 1 0 SKI AK12 nsv823475 1 2228155 2231479 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv4n67 nssv1428813 S 31 1 0 SKI AK12 nssv1437924 1 2228155 2231726 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823586 "" S 31 1 0 Samples from several populations that are part of the HapMap project. SKI NA18951 nsv823586 1 2228155 2231726 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv4n67 nssv1437924 S 31 1 0 SKI NA18951 nssv1955 1 2229184 2260976 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv4742 "" S 9 1 0 Samples from several populations that are part of the HapMap project. MORN1,SKI NA18555 nssv1509307 1 2230243 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870512 "" S 6533 0 1 MORN1,SKI SP54782 nsv870512 1 2230243 2270521 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv68n71 nssv1509307 S 6533 0 1 MORN1,SKI SP54782 nssv8452 1 2240776 2272062 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv4742 "" S 9 1 0 Samples from several populations that are part of the HapMap project. LOC100129534,MORN1 NA12156 nssv3953 1 2240971 2269918 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv4742 "" S 9 1 0 Samples from several populations that are part of the HapMap project. MORN1 NA12878 nssv5660 1 2241665 2249140 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv4742 "" S 9 1 0 Samples from several populations that are part of the HapMap project. MORN1 NA19129 essv5196708 1 2245558 2248109 CNV Loss McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2502867 "" S 1 0 1 MORN1 NA18507 nssv1558400 1 2253748 2349841 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870616 "" S 6533 1 0 LOC100129534,MORN1,PEX10,RER1 MS23257 nssv1576666 1 2272977 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870877 "" S 6533 0 1 LOC100129534,MORN1,PEX10,PLCH2,RER1 IS34235 nsv870877 1 2272977 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv69n71 nssv1576666 S 6533 0 1 LOC100129534,MORN1,PEX10,PLCH2,RER1 IS34235 nssv1580799 1 2289511 2315869 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871012 "" S 6533 0 1 MORN1,RER1 IS35484 nsv871012 1 2289511 2315869 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv70n71 nssv1580799 S 6533 0 1 MORN1,RER1 IS35484 nssv1587768 1 2291551 2310562 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871856 "" S 6533 0 1 MORN1 IS38111 nssv1546434 1 2291551 2497275 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871411 "" S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS17208 nsv871411 1 2291551 2497275 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv71n71 nssv1546434 S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS17208 nssv1576873 1 2293372 2317675 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870714 "" S 6533 0 1 MORN1,RER1 IS34304 nsv870714 1 2293372 2317675 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv70n71 nssv1576873 S 6533 0 1 MORN1,RER1 IS34304 nssv1572769 1 2293372 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870803 "" S 6533 0 1 MORN1,PEX10,PLCH2,RER1 IS33178 nsv870803 1 2293372 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv69n71 nssv1572769 S 6533 0 1 MORN1,PEX10,PLCH2,RER1 IS33178 nssv1574980 1 2293372 2434274 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871136 "" S 6533 0 1 MORN1,PANK4,PEX10,PLCH2,RER1 IS33684 nsv871136 1 2293372 2434274 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv69n71 nssv1574980 S 6533 0 1 MORN1,PANK4,PEX10,PLCH2,RER1 IS33684 nssv1570668 1 2293372 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871601 "" S 6533 0 1 MORN1,PANK4,PEX10,PLCH2,RER1 IS32322 nsv871601 1 2293372 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv69n71 nssv1570668 S 6533 0 1 MORN1,PANK4,PEX10,PLCH2,RER1 IS32322 nssv1573726 1 2293372 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871519 "" S 6533 0 1 HES5,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1 IS33504 nsv871519 1 2293372 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv72n71 nssv1573726 S 6533 0 1 HES5,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1 IS33504 nssv1530123 1 2293372 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870478 "" S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS10204 nssv1571443 1 2293372 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870478 "" S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 IS32737 nsv870478 1 2293372 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv71n71 nssv1571443,nssv1530123 M 6533 0 2 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 IS32737,MS10204 nssv1538560 1 2293372 2503076 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871710 "" S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS13770 nsv871710 1 2293372 2503076 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv71n71 nssv1538560 S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS13770 nssv1530403 1 2293372 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871439 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS10311 nsv871439 1 2293372 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv71n71 nssv1530403 S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS10311 nssv1543340 1 2296832 2322891 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870564 "" S 6533 0 1 MORN1,RER1 MS16153 nsv870564 1 2296832 2322891 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv70n71 nssv1543340 S 6533 0 1 MORN1,RER1 MS16153 nssv1509712 1 2296832 2380064 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871788 "" S 6533 0 1 MORN1,PEX10,RER1 SP54956 nsv871788 1 2296832 2380064 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv73n71 nssv1509712 S 6533 0 1 MORN1,PEX10,RER1 SP54956 nssv1549597 1 2296832 2494593 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870955 "" S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS18276 nsv870955 1 2296832 2494593 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv71n71 nssv1549597 S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS18276 nssv697462 1 2297341 2298942 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520511 "" S 2026 0 1 MORN1 nssv1510632 1 2305577 2340772 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870492 "" S 6533 0 1 MORN1,PEX10,RER1 SP54988 nssv1596025 1 2305577 2380448 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871447 "" S 6533 0 1 MORN1,PEX10,RER1 IS40396 nsv871447 1 2305577 2380448 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv73n71 nssv1596025 S 6533 0 1 MORN1,PEX10,RER1 IS40396 nssv1565135 1 2305577 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871041 "" S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 IS30369 nsv871041 1 2305577 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv71n71 nssv1565135 S 6533 0 1 HES5,LOC100133445,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 IS30369 nssv1592787 1 2309288 2398694 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871333 "" S 6533 0 1 MORN1,PEX10,PLCH2,RER1 IS39258 nsv871333 1 2309288 2398694 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv74n71 nssv1592787 S 6533 0 1 MORN1,PEX10,PLCH2,RER1 IS39258 nssv1599351 1 2309288 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871448 "" S 6533 0 1 HES5,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1 IS41634 nsv871448 1 2309288 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv72n71 nssv1599351 S 6533 0 1 HES5,LOC115110,MORN1,PANK4,PEX10,PLCH2,RER1 IS41634 nssv1593363 1 2309288 2813319 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871682 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14,TTC34 IS39417 nsv871682 1 2309288 2813319 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv75n71 nssv1593363 S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,MORN1,PANK4,PEX10,PLCH2,RER1,TNFRSF14,TTC34 IS39417 nssv1584759 1 2310562 2470197 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871596 "" S 6533 0 1 HES5,MORN1,PANK4,PEX10,PLCH2,RER1 IS37172 nsv871596 1 2310562 2470197 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv72n71 nssv1584759 S 6533 0 1 HES5,MORN1,PANK4,PEX10,PLCH2,RER1 IS37172 nssv1426365 1 2310992 2327218 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823697 "" S 31 1 0 MORN1,PEX10,RER1 AK6 nssv547658 1 2315869 2362949 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PEX10,RER1 HGDP00333 nssv547669 1 2316935 2440254 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PEX10,PLCH2,RER1 HGDP00556 nssv547659 1 2316935 2543484 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 HGDP00290 nssv1547668 1 2317675 2369108 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870567 "" S 6533 0 1 PEX10,RER1 MS17522 nssv1574782 1 2317675 2398694 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870488 "" S 6533 0 1 PEX10,PLCH2,RER1 IS33630 nsv870488 1 2317675 2398694 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv74n71 nssv1574782 S 6533 0 1 PEX10,PLCH2,RER1 IS33630 nssv1573042 1 2317675 2413982 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871515 "" S 6533 0 1 PEX10,PLCH2,RER1 IS33239 nssv1599098 1 2317675 2413982 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871515 "" S 6533 0 1 PEX10,PLCH2,RER1 IS41410 nsv871515 1 2317675 2413982 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv76n71 nssv1573042,nssv1599098 M 6533 0 2 PEX10,PLCH2,RER1 IS33239,IS41410 nssv1573160 1 2317675 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870848 "" S 6533 0 1 PEX10,PLCH2,RER1 IS33248 nsv870848 1 2317675 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv76n71 nssv1573160 S 6533 0 1 PEX10,PLCH2,RER1 IS33248 nssv1574574 1 2317675 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871798 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2,RER1 IS33601 nssv1595346 1 2317675 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871798 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2,RER1 IS40230 nsv871798 1 2317675 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv72n71 nssv1595346,nssv1574574 M 6533 0 2 HES5,PANK4,PEX10,PLCH2,RER1 IS33601,IS40230 nssv1544211 1 2317675 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870967 "" S 6533 0 1 HES5,LOC115110,PANK4,PEX10,PLCH2,RER1 MS16315 nsv870967 1 2317675 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv72n71 nssv1544211 S 6533 0 1 HES5,LOC115110,PANK4,PEX10,PLCH2,RER1 MS16315 nssv1531244 1 2317675 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870858 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS10386 nssv1532354 1 2317675 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870858 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 MS10769 nssv1567111 1 2317675 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870858 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 IS31045 nssv1586796 1 2317675 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870858 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 IS37985 nsv870858 1 2317675 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv71n71 nssv1531244,nssv1567111,nssv1586796,nssv1532354 M 6533 0 4 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14 IS31045,IS37985,MS10386,MS10769 nssv1537042 1 2317675 2768903 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870587 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14,TTC34 MS13095 nsv870587 1 2317675 2768903 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv75n71 nssv1537042 S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14,TTC34 MS13095 essv5353074 1 2322112 2323107 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2631918 "" S 1 1 0 RER1 NA18507 nssv541786 1 2322891 2417572 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466171 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PEX10,PLCH2,RER1 HGDP00607 nsv466171 1 2322891 2417572 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv1n27 nssv541786 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PEX10,PLCH2,RER1 HGDP00607 nssv547660 1 2322891 2434274 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PEX10,PLCH2,RER1 HGDP00302 nssv542619 1 2322891 2440254 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467282 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PEX10,PLCH2,RER1 HGDP00614 nsv467282 1 2322891 2440254 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv1n27 nssv542619 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PEX10,PLCH2,RER1 HGDP00614 nssv625334 1 2323086 2323243 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512710 "" S 1 1 0 RER1 1 nssv1436324 1 2324440 2325694 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823808 "" S 31 1 0 Samples from several populations that are part of the HapMap project. RER1 NA18542 nssv1569994 1 2325536 2436740 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871767 "" S 6533 1 0 PANK4,PEX10,PLCH2,RER1 IS31763 nsv871767 1 2325536 2436740 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv77n71 nssv1569994 S 6533 1 0 PANK4,PEX10,PLCH2,RER1 IS31763 nssv1576248 1 2325536 2842066 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871214 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14,TTC34 IS34005 nsv871214 1 2325536 2842066 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv75n71 nssv1576248 S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,RER1,TNFRSF14,TTC34 IS34005 nssv1568384 1 2328934 2394116 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871412 "" S 6533 0 1 PEX10 IS31270 nssv1570027 1 2328934 2394116 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871412 "" S 6533 0 1 PEX10 IS31766 nssv1570328 1 2328934 2394116 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871412 "" S 6533 0 1 PEX10 IS31904 nssv1574104 1 2328934 2394116 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871412 "" S 6533 0 1 PEX10 IS33514 nssv1592772 1 2328934 2394116 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871412 "" S 6533 0 1 PEX10 IS39254 nsv871412 1 2328934 2394116 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv74n71 nssv1592772,nssv1570328,nssv1568384,nssv1570027,nssv1574104 M 6533 0 5 PEX10 IS31270,IS31766,IS31904,IS33514,IS39254 nssv1575691 1 2328934 2398694 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871103 "" S 6533 0 1 PEX10,PLCH2 IS33797 nsv871103 1 2328934 2398694 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv74n71 nssv1575691 S 6533 0 1 PEX10,PLCH2 IS33797 nssv1551380 1 2328934 2413982 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870989 "" S 6533 0 1 PEX10,PLCH2 MS18848 nssv1574872 1 2328934 2413982 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870989 "" S 6533 0 1 PEX10,PLCH2 IS33665 nssv1575568 1 2328934 2413982 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870989 "" S 6533 0 1 PEX10,PLCH2 IS33776 nsv870989 1 2328934 2413982 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv76n71 nssv1551380,nssv1574872,nssv1575568 M 6533 0 3 PEX10,PLCH2 IS33665,IS33776,MS18848 nssv1546041 1 2328934 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870715 "" S 6533 0 1 PEX10,PLCH2 MS17114 nssv1572351 1 2328934 2415852 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870715 "" S 6533 1 0 PEX10,PLCH2 IS32998 nssv1573468 1 2328934 2415852 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870715 "" S 6533 1 0 PEX10,PLCH2 IS33403 nssv1573703 1 2328934 2415852 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870715 "" S 6533 1 0 PEX10,PLCH2 IS33493 nssv1583495 1 2328934 2415852 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870715 "" S 6533 1 0 PEX10,PLCH2 IS36519 nsv870715 1 2328934 2415852 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv78n71 nssv1583495,nssv1546041,nssv1573703,nssv1573468,nssv1572351 M 6533 4 1 PEX10,PLCH2 IS32998,IS33403,IS33493,IS36519,MS17114 nssv1589910 1 2328934 2434274 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870998 "" S 6533 1 0 PANK4,PEX10,PLCH2 IS38430 nssv1595758 1 2328934 2434274 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870998 "" S 6533 0 1 PANK4,PEX10,PLCH2 IS40318 nsv870998 1 2328934 2434274 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv78n71 nssv1589910,nssv1595758 M 6533 1 1 PANK4,PEX10,PLCH2 IS38430,IS40318 nssv1533517 1 2328934 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 0 1 PANK4,PEX10,PLCH2 MS11237 nssv1535496 1 2328934 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 0 1 PANK4,PEX10,PLCH2 MS12262 nssv1538394 1 2328934 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 0 1 PANK4,PEX10,PLCH2 MS13727 nssv1542681 1 2328934 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 0 1 PANK4,PEX10,PLCH2 MS15835 nssv1572610 1 2328934 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 0 1 PANK4,PEX10,PLCH2 IS33162 nssv1572755 1 2328934 2436740 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 1 0 PANK4,PEX10,PLCH2 IS33175 nssv1574320 1 2328934 2436740 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 1 0 PANK4,PEX10,PLCH2 IS33543 nssv1585611 1 2328934 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 0 1 PANK4,PEX10,PLCH2 IS37577 nssv1588836 1 2328934 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871857 "" S 6533 0 1 PANK4,PEX10,PLCH2 IS38262 nsv871857 1 2328934 2436740 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv78n71 nssv1533517,nssv1572610,nssv1585611,nssv1574320,nssv1538394,nssv1535496,nssv1542681,nssv1588836,nssv1572755 M 6533 2 7 PANK4,PEX10,PLCH2 IS33162,IS33175,IS33543,IS37577,IS38262,MS11237,MS12262,MS13727,MS15835 nssv1531908 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870804 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2 MS10698 nssv1566639 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870804 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2 IS30835 nssv1578968 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870804 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2 IS35007 nssv1584223 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870804 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2 IS36910 nssv1586578 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870804 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2 IS37874 nssv1589063 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870804 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2 IS38293 nssv1594371 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870804 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2 IS39817 nssv1600508 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870804 "" S 6533 0 1 HES5,PANK4,PEX10,PLCH2 IS41894 nsv870804 1 2328934 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv72n71 nssv1584223,nssv1566639,nssv1531908,nssv1578968,nssv1600508,nssv1586578,nssv1589063,nssv1594371 M 6533 0 8 HES5,PANK4,PEX10,PLCH2 IS30835,IS35007,IS36910,IS37874,IS38293,IS39817,IS41894,MS10698 nssv1580800 1 2328934 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870917 "" S 6533 0 1 HES5,LOC115110,PANK4,PEX10,PLCH2 IS35484 nssv1588167 1 2328934 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870917 "" S 6533 0 1 HES5,LOC115110,PANK4,PEX10,PLCH2 IS38176 nssv1589593 1 2328934 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870917 "" S 6533 0 1 HES5,LOC115110,PANK4,PEX10,PLCH2 IS38388 nssv1589729 1 2328934 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870917 "" S 6533 0 1 HES5,LOC115110,PANK4,PEX10,PLCH2 IS38403 nssv1595909 1 2328934 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870917 "" S 6533 0 1 HES5,LOC115110,PANK4,PEX10,PLCH2 IS40368 nsv870917 1 2328934 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv72n71 nssv1589593,nssv1588167,nssv1589729,nssv1595909,nssv1580800 M 6533 0 5 HES5,LOC115110,PANK4,PEX10,PLCH2 IS35484,IS38176,IS38388,IS38403,IS40368 nssv1571840 1 2328934 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871118 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,TNFRSF14 IS32841 nssv1576874 1 2328934 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871118 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,TNFRSF14 IS34304 nssv1598686 1 2328934 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871118 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,TNFRSF14 IS41243 nsv871118 1 2328934 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv71n71 nssv1576874,nssv1598686,nssv1571840 M 6533 0 3 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,TNFRSF14 IS32841,IS34304,IS41243 nssv1529770 1 2328934 2837348 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871309 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,TNFRSF14,TTC34 MS10123 nsv871309 1 2328934 2837348 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv75n71 nssv1529770 S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PEX10,PLCH2,TNFRSF14,TTC34 MS10123 nssv1511305 1 2343729 2385312 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870799 "" S 6533 0 1 "" SP55021 nssv1510633 1 2343729 2470197 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870920 "" S 6533 0 1 HES5,PANK4,PLCH2 SP54988 nsv870920 1 2343729 2470197 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv79n71 nssv1510633 S 6533 0 1 HES5,PANK4,PLCH2 SP54988 nssv547663 1 2349841 2440254 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PLCH2 HGDP00789 nssv547670 1 2349841 2440254 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PLCH2 HGDP00546 nssv547672 1 2349841 2440254 CNV Gain Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470685 "" S 443 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PLCH2 HGDP00720 nssv1534089 1 2351880 2434274 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871966 "" S 6533 0 1 PANK4,PLCH2 MS11467 nsv871966 1 2351880 2434274 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv80n71 nssv1534089 S 6533 0 1 PANK4,PLCH2 MS11467 nssv1564277 1 2351880 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870692 "" S 6533 0 1 PANK4,PLCH2 IS30197 nsv870692 1 2351880 2436740 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv80n71 nssv1564277 S 6533 0 1 PANK4,PLCH2 IS30197 nssv1569652 1 2351880 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871838 "" S 6533 0 1 HES5,LOC115110,PANK4,PLCH2 IS31656 nssv1597256 1 2351880 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871838 "" S 6533 0 1 HES5,LOC115110,PANK4,PLCH2 IS40799 nsv871838 1 2351880 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv79n71 nssv1569652,nssv1597256 M 6533 0 2 HES5,LOC115110,PANK4,PLCH2 IS31656,IS40799 nssv1572105 1 2351880 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871004 "" S 6533 0 1 HES5,LOC100133445,LOC115110,PANK4,PLCH2,TNFRSF14 IS32888 nsv871004 1 2351880 2490499 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv79n71 nssv1572105 S 6533 0 1 HES5,LOC100133445,LOC115110,PANK4,PLCH2,TNFRSF14 IS32888 nssv1534418 1 2351880 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870697 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PLCH2,TNFRSF14,TTC34 MS11579 nsv870697 1 2351880 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv75n71 nssv1534418 S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PLCH2,TNFRSF14,TTC34 MS11579 nssv1534672 1 2356176 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871401 "" S 6533 0 1 PLCH2 MS11726 nsv871401 1 2356176 2415852 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv80n71 nssv1534672 S 6533 0 1 PLCH2 MS11726 nssv1564416 1 2356176 2434274 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871641 "" S 6533 1 0 PANK4,PLCH2 IS30210 nsv871641 1 2356176 2434274 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv77n71 nssv1564416 S 6533 1 0 PANK4,PLCH2 IS30210 nssv547664 1 2356176 2440254 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PLCH2 HGDP00657 nssv1507437 1 2359358 2394116 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871359 "" S 6533 0 1 "" SP54725 nssv1509308 1 2359358 2453905 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871068 "" S 6533 0 1 HES5,PANK4,PLCH2 SP54782 nsv871068 1 2359358 2453905 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv81n71 nssv1509308 S 6533 0 1 HES5,PANK4,PLCH2 SP54782 essv3577413 1 2361810 2361879 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv988545 "" S 3 0 1 "" HuRef essv4248036 1 2361857 2361857 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1513739 "" S 2 1 0 "" HuRef nssv1543341 1 2362949 2541760 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871726 "" S 6533 0 1 C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PLCH2,TNFRSF14 MS16153 essv8862 1 2366114 2370109 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv11e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. "" NA18508 esv312 1 2366114 2370109 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv11e1 "" S 271 "" nssv1535398 1 2366593 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870948 "" S 6533 0 1 HES5,PANK4,PLCH2 MS12202 nsv870948 1 2366593 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv81n71 nssv1535398 S 6533 0 1 HES5,PANK4,PLCH2 MS12202 nssv1533731 1 2369108 3091213 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870655 "" S 6533 0 1 ACTRT2,C1orf93,FLJ42875,HES5,LOC100133445,LOC115110,MIR4251,MMEL1,PANK4,PLCH2,PRDM16,TNFRSF14,TTC34 MS11306 essv78179 1 2380073 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15167 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA06985 esv15167 1 2380073 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25748 essv78179,essv45516,essv32608,essv67561 M 451 0 4 "" NA06985,NA18858,NA19129,NA19147 essv45516 1 2380218 2380858 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15167 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19129 essv67561 1 2380218 2380858 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15167 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18858 essv32608 1 2380218 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15167 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19147 essv39922 1 2380418 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12176 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12287 esv12176 1 2380418 2381162 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25748 essv43773,essv71583,essv36533,essv66046,essv74402,essv61372,essv39922,essv76792 M 451 0 8 "" NA11894,NA12004,NA12239,NA12287,NA18511,NA18909,NA18916,NA19240 essv43773 1 2380438 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12176 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18909 essv61372 1 2380438 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12176 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12239 essv74402 1 2380438 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12176 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12004 essv76792 1 2380438 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12176 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18511 essv66046 1 2380438 2381162 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12176 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19240 essv71583 1 2380438 2381162 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12176 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18916 nssv1578778 1 2380448 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870865 "" S 6533 0 1 HES5,PANK4,PLCH2 IS34908 nsv870865 1 2380448 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv81n71 nssv1578778 S 6533 0 1 HES5,PANK4,PLCH2 IS34908 nssv1578821 1 2380448 2470197 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871912 "" S 6533 1 0 HES5,PANK4,PLCH2 IS34912 essv36533 1 2380518 2380978 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12176 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11894 essv3583245 1 2383548 2383548 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv989190 "" S 3 1 0 "" HuRef essv3609131 1 2383637 2383637 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1307242 "" S 2 1 0 "" HuRef nssv547662 1 2394116 2440254 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PANK4,PLCH2 HGDP00313 nssv547671 1 2394116 2480088 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HES5,LOC115110,PANK4,PLCH2,TNFRSF14 HGDP00550 nssv547661 1 2394116 2723447 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PLCH2,TNFRSF14,TTC34 HGDP00288 nssv547665 1 2394116 2819411 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf93,HES5,LOC100133445,LOC115110,MMEL1,PANK4,PLCH2,TNFRSF14,TTC34 HGDP00978 nssv1584117 1 2399136 2480088 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871255 "" S 6533 0 1 HES5,LOC115110,PANK4,PLCH2,TNFRSF14 IS36876 nssv1440793 1 2403604 2473701 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv823920 "" S 31 1 0 Samples from several populations that are part of the HapMap project. HES5,LOC115110,PANK4,PLCH2 NA18969 nssv1417514 1 2413982 2480088 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818222 "" S 112 0 1 Samples from several populations that are part of the HapMap project. HES5,LOC115110,PANK4,PLCH2,TNFRSF14 NA18968 nssv1417806 1 2413982 2480088 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818222 "" S 112 0 1 Samples from several populations that are part of the HapMap project. HES5,LOC115110,PANK4,PLCH2,TNFRSF14 NA18853 nssv6533 1 2433858 2488860 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. HES5,LOC100133445,LOC115110,PANK4,TNFRSF14 NA12156 nssv10864 1 2435836 2487658 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. HES5,LOC100133445,LOC115110,PANK4,TNFRSF14 NA18956 nssv2047 1 2436575 2488353 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. HES5,LOC100133445,LOC115110,PANK4,TNFRSF14 NA18555 nssv1153 1 2436746 2488309 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. HES5,LOC100133445,LOC115110,PANK4,TNFRSF14 NA19240 nssv5743 1 2438123 2489396 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. HES5,LOC100133445,LOC115110,PANK4,TNFRSF14 NA19129 nssv1509007 1 2439052 2467010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870754 "" S 6533 0 1 HES5,PANK4 SP54725 nssv1511306 1 2439052 2467010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870754 "" S 6533 0 1 HES5,PANK4 SP55021 nsv870754 1 2439052 2467010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv82n71 nssv1511306,nssv1509007 M 6533 0 2 HES5,PANK4 SP54725,SP55021 nssv10990 1 2441929 2482323 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 HES5,LOC115110,PANK4,TNFRSF14 NA15510 nssv1426366 1 2442099 2472957 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824031 "" S 31 1 0 HES5,LOC115110,PANK4 AK6 nssv9802 1 2442343 2487565 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. HES5,LOC100133445,LOC115110,PANK4,TNFRSF14 NA18507 nssv1509065 1 2442429 2455004 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871072 "" S 6533 0 1 HES5,PANK4 SP54750 nsv871072 1 2442429 2455004 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv83n71 nssv1509065 S 6533 0 1 HES5,PANK4 SP54750 nssv1506410 1 2442429 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871366 "" S 6533 0 1 HES5,PANK4 SP54345 nssv1507677 1 2442429 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871366 "" S 6533 0 1 HES5,PANK4 SP54591 nssv1508028 1 2442429 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871366 "" S 6533 0 1 HES5,PANK4 SP54657 nssv1511165 1 2442429 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871366 "" S 6533 0 1 HES5,PANK4 SP55019 nsv871366 1 2442429 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv83n71 nssv1508028,nssv1511165,nssv1507677,nssv1506410 M 6533 0 4 HES5,PANK4 SP54345,SP54591,SP54657,SP55019 nssv1505914 1 2442429 2467010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871253 "" S 6533 0 1 HES5,PANK4 SP54043 nsv871253 1 2442429 2467010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv82n71 nssv1505914 S 6533 0 1 HES5,PANK4 SP54043 nssv1509713 1 2442429 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870759 "" S 6533 0 1 HES5,LOC115110,PANK4 SP54956 nsv870759 1 2442429 2472781 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv82n71 nssv1509713 S 6533 0 1 HES5,LOC115110,PANK4 SP54956 nssv4052 1 2442927 2482596 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. HES5,LOC115110,PANK4,TNFRSF14 NA12878 nssv9287 1 2442992 2485325 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. HES5,LOC115110,PANK4,TNFRSF14 NA18517 essv5387623 1 2443495 2444308 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2583485 "" S 1 1 0 PANK4 NA18507 essv3796592 1 2444115 2444115 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1165961 "" S 2 1 0 PANK4 HuRef nssv1519321 1 2445360 2455004 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871346 "" S 6533 0 1 HES5,PANK4 SP81010 nsv871346 1 2445360 2455004 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv84n71 nssv1519321 S 6533 0 1 HES5,PANK4 SP81010 nssv1508866 1 2445360 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870645 "" S 6533 0 1 HES5,PANK4 SP54593 nssv1510489 1 2445360 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870645 "" S 6533 0 1 HES5,PANK4 SP54967 nsv870645 1 2445360 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv84n71 nssv1510489,nssv1508866 M 6533 0 2 HES5,PANK4 SP54593,SP54967 nssv1502169 1 2446063 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871949 "" S 6533 0 1 HES5,PANK4 SP51109 nssv1510586 1 2446063 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871949 "" S 6533 0 1 HES5,PANK4 SP54979 nsv871949 1 2446063 2456493 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv84n71 nssv1502169,nssv1510586 M 6533 0 2 HES5,PANK4 SP51109,SP54979 nssv1 1 2446450 2478865 OTHER Inversion Tuzun et al 2005 15895083 BAC_aCGH,PCR,Read-depth_analysis Capillary nsv1 "" S 1 0 0 HES5,LOC115110,PANK4 NA15510 essv3564272 1 2471782 2490872 OTHER Inversion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv996586 "" S 3 0 0 LOC100133445,LOC115110,TNFRSF14 HuRef nssv626884 1 2472748 2489106 OTHER Inversion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv513632 "" S 1 0 0 LOC100133445,LOC115110,TNFRSF14 1 nsv513632 1 2472748 2489106 OTHER Inversion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer dgv1n50 nssv626884 S 1 0 0 LOC100133445,LOC115110,TNFRSF14 1 nssv626885 1 2473504 2489016 OTHER Inversion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv513633 "" S 1 0 0 LOC100133445,LOC115110,TNFRSF14 1 nsv513633 1 2473504 2489016 OTHER Inversion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer dgv1n50 nssv626885 S 1 0 0 LOC100133445,LOC115110,TNFRSF14 1 essv5165573 1 2473764 2490238 OTHER Inversion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2471749 "" S 1 0 0 LOC100133445,LOC115110,TNFRSF14 NA18507 nssv10880 1 2474430 2527819 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. C1orf93,LOC100133445,MMEL1,TNFRSF14 NA18956 nssv585480 1 2474521 2489144 OTHER Inversion Kidd et al 2010b 21111241 Read-depth_analysis,Sequence_alignment Capillary nsv499637 "" S 9 0 0 LOC100133445,TNFRSF14 nssv585481 1 2474521 2489144 OTHER Inversion Kidd et al 2010b 21111241 Read-depth_analysis,Sequence_alignment Capillary nsv499113 "" S 9 0 0 LOC100133445,TNFRSF14 nsv499113 1 2474521 2489144 OTHER Inversion Kidd et al 2010b 21111241 Read-depth_analysis,Sequence_alignment Capillary dgv1n47 nssv585481 S 9 0 0 LOC100133445,TNFRSF14 nsv499637 1 2474521 2489144 OTHER Inversion Kidd et al 2010b 21111241 Read-depth_analysis,Sequence_alignment Capillary dgv1n47 nssv585480 S 9 0 0 LOC100133445,TNFRSF14 essv4270452 1 2475133 2489144 OTHER Inversion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1699286 "" S 2 0 0 LOC100133445,TNFRSF14 HuRef nssv585482 1 2475134 2489757 OTHER Inversion Kidd et al 2010b 21111241 Read-depth_analysis,Sequence_alignment Capillary nsv499569 "" S 9 0 0 LOC100133445,TNFRSF14 nsv499569 1 2475134 2489757 OTHER Inversion Kidd et al 2010b 21111241 Read-depth_analysis,Sequence_alignment Capillary dgv1n47 nssv585482 S 9 0 0 LOC100133445,TNFRSF14 nssv6621 1 2476110 2526391 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. C1orf93,LOC100133445,MMEL1,TNFRSF14 NA12156 nssv2141 1 2476248 2527931 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. C1orf93,LOC100133445,MMEL1,TNFRSF14 NA18555 nssv1431789 1 2476434 2478083 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824142 "" S 31 0 1 "" AK20 nsv824142 1 2476434 2478083 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv5n67 nssv1431789 S 31 0 1 "" AK20 nssv1431941 1 2476678 2478083 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824253 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18972 nsv824253 1 2476678 2478083 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv5n67 nssv1431941 S 31 0 1 "" NA18972 nssv466250 1 2477117 2490251 OTHER Inversion Korbel et al 2007 17901297 FISH,Oligo_aCGH,PCR,Sequencing 454 nsv436691 "" S 2 0 0 Samples from several populations that are part of the HapMap project. LOC100133445,TNFRSF14 NA18505 nssv1450739 1 2477440 2562200 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829648 "" S 95 0 1 C1orf93,LOC100133445,MMEL1,TNFRSF14 nssv4140 1 2478086 2524848 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. C1orf93,LOC100133445,MMEL1,TNFRSF14 NA12878 nssv1241 1 2478655 2526431 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. C1orf93,LOC100133445,MMEL1,TNFRSF14 NA19240 nssv1597588 1 2480088 2689509 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871833 "" S 6533 0 1 C1orf93,LOC100133445,MMEL1,TNFRSF14,TTC34 IS41317 nssv9849 1 2480108 2516527 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. C1orf93,LOC100133445,MMEL1,TNFRSF14 NA18507 nssv1434859 1 2480304 2481406 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824364 "" S 31 0 1 Samples from several populations that are part of the HapMap project. TNFRSF14 NA18942 nssv5821 1 2480377 2520453 OTHER Inversion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7171 "" S 9 0 0 Samples from several populations that are part of the HapMap project. C1orf93,LOC100133445,MMEL1,TNFRSF14 NA19129 nssv1431952 1 2480963 2481406 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824475 "" S 31 0 1 Samples from several populations that are part of the HapMap project. TNFRSF14 NA18972 nssv1510634 1 2503076 2534500 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870979 "" S 6533 0 1 C1orf93,MMEL1 SP54988 nssv1538395 1 2503076 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870671 "" S 6533 0 1 C1orf93,MMEL1,TTC34 MS13727 nssv1573727 1 2503076 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870671 "" S 6533 0 1 C1orf93,MMEL1,TTC34 IS33504 nssv1588168 1 2503076 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870671 "" S 6533 0 1 C1orf93,MMEL1,TTC34 IS38176 nsv870671 1 2503076 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv85n71 nssv1588168,nssv1538395,nssv1573727 M 6533 0 3 C1orf93,MMEL1,TTC34 IS33504,IS38176,MS13727 nssv452575 1 2543838 3142350 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428399 "" S 62 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ACTRT2,FLJ42875,MIR4251,MMEL1,PRDM16,TTC34 HGDP00450 nssv1587968 1 2545871 2723447 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871944 "" S 6533 0 1 MMEL1,TTC34 IS38144 nsv871944 1 2545871 2723447 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv85n71 nssv1587968 S 6533 0 1 MMEL1,TTC34 IS38144 nssv1572254 1 2545871 2768903 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871821 "" S 6533 0 1 MMEL1,TTC34 IS32918 nsv871821 1 2545871 2768903 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv85n71 nssv1572254 S 6533 0 1 MMEL1,TTC34 IS32918 nssv1533518 1 2554043 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870971 "" S 6533 0 1 MMEL1,TTC34 MS11237 nsv870971 1 2554043 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv85n71 nssv1533518 S 6533 0 1 MMEL1,TTC34 MS11237 essv69307 1 2555784 2556619 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12744 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12044 esv12744 1 2555784 2556619 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21805 essv69307 S 451 1 0 "" NA12044 nssv626021 1 2555862 2556342 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina HumanOmni1-Quad BeadChip nsv511152 "" S 1 0 1 "" 1 essv4612274 1 2555889 2556583 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1931226 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv47280 1 2556119 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18861 essv4164733 1 2556377 2556377 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1624207 "" S 2 1 0 "" HuRef essv3565426 1 2562327 2573939 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv994553 "" S 3 1 0 TTC34 HuRef essv43577 1 2563111 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18909 esv18116 1 2563111 2624042 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21805 essv35932,essv43577,essv54557,essv58422,essv57050,essv82638,essv72764,essv52698,essv44606,essv62441,essv34942,essv53641,essv49750,essv60000,essv68066,essv47280 M 451 14 2 TTC34 NA11993,NA12006,NA12489,NA15510,NA18502,NA18508,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA19099,NA19108,NA19190,NA19225 essv53641 1 2569427 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18508 essv44606 1 2569752 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12489 essv60000 1 2569932 2615222 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18523 essv68066 1 2569932 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18858 nssv1438579 1 2570328 2573301 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824586 "" S 31 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18973 essv49750 1 2570417 2624042 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA18517 nssv179695 1 2572889 2573455 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv161117 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 essv62441 1 2573167 2621667 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 TTC34 NA15510 essv58422 1 2573257 2620622 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA19108 essv35932 1 2573257 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18907 nssv178756 1 2573419 2579758 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160178 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nsv160178 1 2573419 2579758 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided dgv1n6 nssv178756 M 24 TTC34 essv4214883 1 2573430 2573430 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1381913 "" S 2 1 0 TTC34 HuRef essv52698 1 2573452 2621922 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12006 nssv1420513 1 2573460 2624042 CNV Duplication Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv820462 "" S 1 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA10851 essv79049 1 2573507 2578207 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16589 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12749 esv16589 1 2573507 2578207 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21805 essv79049 S 451 1 0 TTC34 NA12749 nssv179531 1 2573560 2574160 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160953 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv178970 1 2573767 2580949 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160392 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nsv160392 1 2573767 2580949 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided dgv1n6 nssv178970 M 24 TTC34 nssv179267 1 2573792 2574393 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160689 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 essv57050 1 2573892 2621667 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA11993 essv34942 1 2573892 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18502 essv72764 1 2573917 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA19225 essv3568762 1 2574087 2574929 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv999533 "" S 3 0 1 TTC34 HuRef essv82638 1 2574367 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA19190 nssv1531245 1 2574398 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871287 "" S 6533 0 1 TTC34 MS10386 nssv1572106 1 2574398 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871287 "" S 6533 0 1 TTC34 IS32888 nsv871287 1 2574398 2744372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv85n71 nssv1531245,nssv1572106 M 6533 0 2 TTC34 IS32888,MS10386 nssv1584118 1 2574398 2759402 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870953 "" S 6533 0 1 TTC34 IS36876 nsv870953 1 2574398 2759402 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv85n71 nssv1584118 S 6533 0 1 TTC34 IS36876 nssv1544212 1 2574398 2849584 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870893 "" S 6533 0 1 TTC34 MS16315 nssv1576875 1 2574398 2849584 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870893 "" S 6533 0 1 TTC34 IS34304 nsv870893 1 2574398 2849584 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv86n71 nssv1576875,nssv1544212 M 6533 0 2 TTC34 IS34304,MS16315 nssv1532355 1 2574398 2909010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871729 "" S 6533 0 1 TTC34 MS10769 nsv871729 1 2574398 2909010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv86n71 nssv1532355 S 6533 0 1 TTC34 MS10769 nssv178372 1 2574506 2576192 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159794 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv178575 1 2574735 2574895 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159997 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv178631 1 2575167 2575167 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160053 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 essv31065 1 2575936 2619046 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv8624 "" S 1 0 1 TTC34 SJK essv4845344 1 2577543 2599245 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1995006 "" S 1 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA18507 essv3575600 1 2577640 2610115 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv999575 "" S 3 0 1 TTC34 HuRef essv40122 1 2577782 2604497 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21190 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA12878 esv21190 1 2577782 2604497 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21805 essv73556,essv62091,essv76309,essv79704,essv40122 M 451 0 5 TTC34 NA12156,NA12239,NA12414,NA12749,NA12878 essv79704 1 2578307 2604497 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21190 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA12749 essv73556 1 2578537 2604497 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21190 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA12156 essv76309 1 2578537 2604497 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21190 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA12414 nssv9998 1 2579130 2604293 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv5853 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18956 essv62091 1 2580037 2604497 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21190 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA12239 essv54557 1 2580037 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18116 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA19099 essv3785302 1 2583107 2583107 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1159004 "" S 2 1 0 TTC34 HuRef essv4117042 1 2583565 2583646 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1780740 "" S 2 0 1 TTC34 HuRef essv3745617 1 2583736 2583816 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1286791 "" S 2 0 1 TTC34 HuRef essv3584427 1 2583755 2584637 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1001627 "" S 3 0 1 TTC34 HuRef essv3788684 1 2585273 2585353 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1366162 "" S 2 0 1 TTC34 HuRef essv4138724 1 2585378 2585617 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1701153 "" S 2 0 1 TTC34 HuRef essv3573398 1 2586613 2596446 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv990905 "" S 3 0 1 TTC34 HuRef essv4133439 1 2586686 2586686 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1348726 "" S 2 1 0 TTC34 HuRef essv3581681 1 2586821 2591234 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv992616 "" S 3 0 1 TTC34 HuRef essv3882975 1 2587408 2587408 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1068112 "" S 2 1 0 TTC34 HuRef essv3644540 1 2588279 2588359 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1134902 "" S 2 0 1 TTC34 HuRef essv3860280 1 2589318 2589438 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1460747 "" S 2 0 1 TTC34 HuRef essv4349278 1 2590097 2590337 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1312498 "" S 2 0 1 TTC34 HuRef essv3566822 1 2591229 2591790 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv997173 "" S 3 0 1 TTC34 HuRef essv3966245 1 2592696 2593218 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1162144 "" S 2 0 1 TTC34 HuRef nssv5901 1 2593317 2598703 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv5853 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA19129 essv4279125 1 2594300 2594381 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1394797 "" S 2 0 1 TTC34 HuRef nssv178872 1 2594341 2598916 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160294 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 essv3803937 1 2595041 2595041 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1779754 "" S 2 1 0 TTC34 HuRef essv3584575 1 2599619 2600180 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv993173 "" S 3 0 1 TTC34 HuRef nssv177961 1 2600428 2606129 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159383 "" M 24 TTC34 essv3575900 1 2601373 2604262 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv989273 "" S 3 0 1 TTC34 HuRef essv64439 1 2604552 2618137 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12824 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA07045 essv79202 1 2604552 2620092 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12824 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12749 essv67354 1 2604552 2621732 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12824 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12828 essv73531 1 2604552 2621777 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12824 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12156 essv74919 1 2604552 2621777 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12824 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12004 essv39186 1 2604552 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12824 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12287 essv48561 1 2604552 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12824 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA07037 esv12824 1 2604552 2624042 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21805 essv78146,essv48561,essv64439,essv74919,essv73531,essv39186,essv79202,essv67354 M 451 8 0 TTC34 NA06985,NA07037,NA07045,NA12004,NA12156,NA12287,NA12749,NA12828 essv78146 1 2605577 2621842 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12824 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA06985 essv29402 1 2605829 2618891 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv6961 "" S 1 0 1 TTC34 SJK nssv178162 1 2606315 2606675 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159584 "" M 24 TTC34 nssv6711 1 2606625 2608044 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv6964 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12156 nssv179455 1 2607837 2613499 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160877 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv4235 1 2608380 2611159 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7534 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12878 nssv178825 1 2610167 2612535 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160247 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv178607 1 2612675 2618697 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160029 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv179457 1 2612977 2615742 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160879 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv177715 1 2613123 2613243 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159137 "" M 24 TTC34 nssv178850 1 2613789 2622864 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160272 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv178919 1 2616150 2617033 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160341 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 essv28922 1 2619841 2620149 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv6481 "" S 1 0 1 TTC34 SJK essv66326 1 2621842 2624042 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12016 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA19240 esv12016 1 2621842 2624042 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21805 essv66326 S 451 0 1 TTC34 NA19240 essv3698632 1 2622421 2622421 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1095177 "" S 2 1 0 TTC34 HuRef nssv178578 1 2622651 2622850 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160000 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans TTC34 nssv178039 1 2623124 2623966 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159461 "" M 24 TTC34 essv39431 1 2674115 2674660 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19931 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12287 esv19931 1 2674115 2674660 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23086 essv39431 S 451 1 0 TTC34 NA12287 essv43915 1 2674115 2679980 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18909 essv72776 1 2674115 2681655 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA19225 essv83495 1 2674115 2681875 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA19190 essv53318 1 2674115 2682025 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18508 essv48368 1 2674115 2682810 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA07037 essv49528 1 2674115 2683280 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA18517 essv35871 1 2674115 2683855 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18907 essv66303 1 2674115 2683970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 0 1 Samples from several populations that are part of the HapMap project. TTC34 NA19240 essv54749 1 2674115 2684055 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA19099 essv68175 1 2674115 2684325 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18858 essv47528 1 2674115 2684390 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18861 essv44540 1 2674115 2684820 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA12489 esv10077 1 2674115 2684820 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23086 essv47528,essv35871,essv43915,essv48368,essv54749,essv83495,essv72776,essv66303,essv44540,essv34469,essv53318,essv49528,essv68175 M 451 11 2 TTC34 NA07037,NA12489,NA18502,NA18508,NA18517,NA18858,NA18861,NA18907,NA18909,NA19099,NA19190,NA19225,NA19240 nssv1420624 1 2674115 2684900 CNV Duplication Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv821258 "" S 1 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA10851 essv34469 1 2674115 2685455 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10077 "" S 451 1 0 Samples from several populations that are part of the HapMap project. TTC34 NA18502 essv3585900 1 2679384 2679543 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1006680 "" S 3 0 1 TTC34 HuRef essv4352306 1 2679971 2680937 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1125194 "" S 2 0 1 TTC34 HuRef nssv1585775 1 2690232 2787716 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871110 "" S 6533 0 1 TTC34 IS37646 nssv1580801 1 2703187 2842567 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871406 "" S 6533 0 1 "" IS35484 nssv547666 1 2717663 2837348 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00657 nssv649856 1 2730561 2912411 CNV Loss Locke et al 2006 16826518 BAC_aCGH Eichler Segmental Duplication BAC array nsv469835 "" M 265 Samples from several populations that are part of the HapMap project. "" nssv1538561 1 2744372 2995991 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870889 "" S 6533 0 1 ACTRT2,FLJ42875,PRDM16 MS13770 nssv1546435 1 2744372 3199783 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871921 "" S 6533 0 1 ACTRT2,FLJ42875,MIR4251,PRDM16 MS17208 nsv871921 1 2744372 3199783 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv87n71 nssv1546435 S 6533 0 1 ACTRT2,FLJ42875,MIR4251,PRDM16 MS17208 essv5201421 1 2755817 2756685 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2455629 "" S 1 1 0 "" NA18507 essv3921204 1 2755889 2755889 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1778376 "" S 2 1 0 "" HuRef essv5324371 1 2758147 2759611 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2606115 "" S 1 0 1 "" NA18507 essv4076825 1 2758505 2758505 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1145877 "" S 2 1 0 "" HuRef nssv533180 1 2759402 2819411 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv455662 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00515 essv3564145 1 2762644 2765985 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1008548 "" S 3 1 0 "" HuRef nssv1530404 1 2768903 2832130 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870507 "" S 6533 0 1 "" MS10311 nssv694715 1 2776953 2778968 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521946 "" S 2026 0 1 "" nssv1509714 1 2776953 2873718 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871556 "" S 6533 0 1 "" SP54956 nssv1538396 1 2778968 2849584 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870651 "" S 6533 0 1 "" MS13727 nssv1574981 1 2778968 2849584 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870651 "" S 6533 0 1 "" IS33684 nsv870651 1 2778968 2849584 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv88n71 nssv1574981,nssv1538396 M 6533 0 2 "" IS33684,MS13727 nssv1534419 1 2787716 2842066 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870985 "" S 6533 0 1 "" MS11579 nssv1535497 1 2787716 2842066 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870985 "" S 6533 0 1 "" MS12262 nssv1592788 1 2787716 2842066 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870985 "" S 6533 0 1 "" IS39258 nsv870985 1 2787716 2842066 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv88n71 nssv1534419,nssv1592788,nssv1535497 M 6533 0 3 "" IS39258,MS11579,MS12262 nssv1542682 1 2791319 2842066 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871834 "" S 6533 0 1 "" MS15835 nsv871834 1 2791319 2842066 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv88n71 nssv1542682 S 6533 0 1 "" MS15835 nssv547668 1 2795967 2837348 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470684 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00661 nssv1572107 1 2819411 2891988 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870499 "" S 6533 0 1 "" IS32888 nssv1543342 1 2825552 2995991 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871683 "" S 6533 0 1 ACTRT2,FLJ42875,PRDM16 MS16153 nssv178103 1 2827696 2827763 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159525 "" M 24 "" essv3577776 1 2855998 2856144 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1009726 "" S 3 0 1 "" HuRef essv4287368 1 2856232 2856379 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1533261 "" S 2 0 1 "" HuRef essv4889243 1 2866308 2866755 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2132425 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 nssv1530405 1 2866385 3220404 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871468 "" S 6533 0 1 ACTRT2,FLJ42875,MIR4251,PRDM16 MS10311 nsv871468 1 2866385 3220404 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv87n71 nssv1530405 S 6533 0 1 ACTRT2,FLJ42875,MIR4251,PRDM16 MS10311 essv25550 1 2866419 2866691 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv3109 "" S 1 0 1 Single Asian sample YH "" YH essv3566726 1 2866454 2866573 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv993932 "" S 3 0 1 "" HuRef essv3656039 1 2866461 2866581 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1703346 "" S 2 0 1 "" HuRef nssv1544213 1 2869500 2909010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871484 "" S 6533 0 1 "" MS16315 nssv1576876 1 2869500 2909010 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871484 "" S 6533 0 1 "" IS34304 nssv1584760 1 2869500 2927172 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870611 "" S 6533 0 1 "" IS37172 nssv1573728 1 2869500 2983498 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871673 "" S 6533 0 1 ACTRT2,FLJ42875,PRDM16 IS33504 nssv1576667 1 2869500 2983498 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871673 "" S 6533 0 1 ACTRT2,FLJ42875,PRDM16 IS34235 nsv871673 1 2869500 2983498 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv89n71 nssv1576667,nssv1573728 M 6533 0 2 ACTRT2,FLJ42875,PRDM16 IS33504,IS34235 nssv1549598 1 2869500 3636151 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871581 "" S 6533 0 1 ACTRT2,ARHGEF16,FLJ42875,MEGF6,MIR4251,MIR551A,PRDM16,TP73,TPRG1L,WRAP73 MS18276 nssv1529771 1 2876326 2995991 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870537 "" S 6533 0 1 ACTRT2,FLJ42875,PRDM16 MS10123 nsv870537 1 2876326 2995991 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv89n71 nssv1529771 S 6533 0 1 ACTRT2,FLJ42875,PRDM16 MS10123 nssv547673 1 2879437 2973947 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470686 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ACTRT2,FLJ42875 HGDP00978 essv52508 1 2882654 2884339 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21208 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12006 esv21208 1 2882654 2884779 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25503 essv36077,essv52508 M 451 0 2 "" NA12006,NA18907 essv36077 1 2882714 2884779 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21208 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18907 nssv1580802 1 2886595 2934387 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871869 "" S 6533 0 1 ACTRT2 IS35484 nsv871869 1 2886595 2934387 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv90n71 nssv1580802 S 6533 0 1 ACTRT2 IS35484 nssv1585776 1 2886595 3010106 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870817 "" S 6533 0 1 ACTRT2,FLJ42875,PRDM16 IS37646 nsv870817 1 2886595 3010106 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv89n71 nssv1585776 S 6533 0 1 ACTRT2,FLJ42875,PRDM16 IS37646 nssv1592085 1 2893916 2934387 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871584 "" S 6533 0 1 ACTRT2 IS39233 nsv871584 1 2893916 2934387 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv90n71 nssv1592085 S 6533 0 1 ACTRT2 IS39233 essv29735 1 2901349 2901716 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv7294 "" S 1 0 1 "" SJK essv27296 1 2901350 2901794 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv4855 "" S 1 0 1 Single Asian sample YH "" YH nssv1450850 1 2913009 3000997 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829759 "" S 95 0 1 ACTRT2,FLJ42875,PRDM16 nssv1450961 1 2913009 3000997 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829759 "" S 95 0 1 ACTRT2,FLJ42875,PRDM16 nssv1597257 1 2918281 2983498 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871476 "" S 6533 0 1 ACTRT2,FLJ42875,PRDM16 IS40799 nsv871476 1 2918281 2983498 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv91n71 nssv1597257 S 6533 0 1 ACTRT2,FLJ42875,PRDM16 IS40799 nssv1576877 1 2918281 2995991 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871962 "" S 6533 0 1 ACTRT2,FLJ42875,PRDM16 IS34304 nsv871962 1 2918281 2995991 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv91n71 nssv1576877 S 6533 0 1 ACTRT2,FLJ42875,PRDM16 IS34304 essv4751842 1 2922693 2923095 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1972331 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv5336919 1 2931995 2932984 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2494725 "" S 1 1 0 "" NA18507 nssv1509715 1 2941694 3010106 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871668 "" S 6533 0 1 FLJ42875,PRDM16 SP54956 nssv179056 1 2949127 2949127 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160478 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans "" nssv1574982 1 2964712 3037112 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871200 "" S 6533 0 1 FLJ42875,MIR4251,PRDM16 IS33684 nssv1426367 1 2965717 2984572 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824697 "" S 31 1 0 FLJ42875,PRDM16 AK6 nssv1543343 1 3037112 3199783 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871104 "" S 6533 0 1 PRDM16 MS16153 nsv871104 1 3037112 3199783 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv92n71 nssv1543343 S 6533 0 1 PRDM16 MS16153 nssv1544214 1 3047521 3121095 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871578 "" S 6533 0 1 PRDM16 MS16315 nssv1529772 1 3047521 3187607 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871419 "" S 6533 0 1 PRDM16 MS10123 nsv871419 1 3047521 3187607 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv92n71 nssv1529772 S 6533 0 1 PRDM16 MS10123 nssv534983 1 3052221 3094490 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457884 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PRDM16 HGDP01234 nssv1592086 1 3070715 3121095 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871691 "" S 6533 0 1 PRDM16 IS39233 essv66082 1 3071567 3072372 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20220 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA19240 esv20220 1 3071567 3072666 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv22935 essv48251,essv75368,essv66082,essv66891,essv60153 M 451 5 0 PRDM16 NA07037,NA12004,NA12828,NA18523,NA19240 essv48251 1 3071797 3072571 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20220 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA07037 essv75368 1 3071797 3072666 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20220 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA12004 essv60153 1 3071842 3072372 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20220 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA18523 essv66891 1 3071842 3072372 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20220 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA12828 nssv535843 1 3073572 3103540 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458995 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PRDM16 HGDP00814 essv73656 1 3073812 3074747 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12712 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA12156 esv12712 1 3073812 3074747 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25107 essv73656 S 451 1 0 PRDM16 NA12156 essv3971964 1 3074394 3074630 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1279453 "" S 2 0 1 PRDM16 HuRef essv3586288 1 3087258 3088463 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv1001450 "" S 3 0 1 PRDM16 HuRef essv62738 1 3087323 3088298 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18850 "" S 451 1 0 PRDM16 NA15510 essv39611 1 3087323 3088359 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18850 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA12287 essv56612 1 3087323 3088359 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18850 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA12776 essv74704 1 3087323 3088359 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18850 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA12004 essv50944 1 3087323 3088663 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18850 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA11931 esv18850 1 3087323 3088663 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26942 essv50944,essv74704,essv52083,essv39611,essv56612,essv62738 M 451 6 0 PRDM16 NA11931,NA12004,NA12006,NA12287,NA12776,NA15510 essv52083 1 3087433 3088298 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18850 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA12006 essv5170486 1 3087770 3087831 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2447933 "" S 1 0 1 PRDM16 NA18507 nssv178912 1 3087875 3087875 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160334 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans PRDM16 nssv1585777 1 3091213 3152069 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871860 "" S 6533 0 1 PRDM16 IS37646 nssv1451072 1 3116665 3245948 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829870 "" S 95 0 1 PRDM16 nssv1451183 1 3116665 3245948 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829870 "" S 95 0 1 PRDM16 nssv1451294 1 3116665 3245948 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829870 "" S 95 0 1 PRDM16 nssv1451405 1 3116665 3245948 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829870 "" S 95 0 1 PRDM16 essv2581108 1 3120199 3120284 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv272780 "" S 7 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA19240 nssv1573729 1 3130324 3198235 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870780 "" S 6533 0 1 PRDM16 IS33504 nssv704374 1 3134605 3198690 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527875 "" S 2026 0 1 PRDM16 nssv1441519 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441530 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441541 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441552 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441563 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441574 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441585 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441596 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441607 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441618 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441630 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441641 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441652 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441663 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441674 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1441685 1 3142452 3323676 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv829981 "" S 95 0 1 PRDM16 nssv1580803 1 3152069 3194003 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870698 "" S 6533 0 1 PRDM16 IS35484 essv5229663 1 3166925 3167569 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2639320 "" S 1 1 0 PRDM16 NA18507 nssv1532356 1 3167971 3225901 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870992 "" S 6533 0 1 PRDM16 MS10769 nssv1544215 1 3171275 3198235 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871128 "" S 6533 0 1 PRDM16 MS16315 nsv871128 1 3171275 3198235 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv93n71 nssv1544215 S 6533 0 1 PRDM16 MS16315 nssv1570669 1 3174715 3199783 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871225 "" S 6533 0 1 PRDM16 IS32322 nssv1576878 1 3174715 3199783 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871225 "" S 6533 0 1 PRDM16 IS34304 nsv871225 1 3174715 3199783 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv93n71 nssv1570669,nssv1576878 M 6533 0 2 PRDM16 IS32322,IS34304 nssv1574983 1 3174715 3200810 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871315 "" S 6533 0 1 PRDM16 IS33684 nsv871315 1 3174715 3200810 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv93n71 nssv1574983 S 6533 0 1 PRDM16 IS33684 nssv1592087 1 3174715 3244216 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871593 "" S 6533 0 1 PRDM16 IS39233 nsv871593 1 3174715 3244216 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv94n71 nssv1592087 S 6533 0 1 PRDM16 IS39233 nssv1533732 1 3174715 3248973 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871677 "" S 6533 0 1 PRDM16 MS11306 nsv871677 1 3174715 3248973 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv94n71 nssv1533732 S 6533 0 1 PRDM16 MS11306 nssv1578969 1 3187607 3199783 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871025 "" S 6533 0 1 PRDM16 IS35007 nssv1422356 1 3199718 3201188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824808 "" S 31 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA18552 nsv824808 1 3199718 3201188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv6n67 nssv1422356 S 31 0 1 PRDM16 NA18552 nssv1429550 1 3199793 3201188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv824919 "" S 31 0 1 PRDM16 AK14 nsv824919 1 3199793 3201188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv6n67 nssv1429550 S 31 0 1 PRDM16 AK14 nssv4419 1 3203967 3239047 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv7645 "" S 9 1 0 Samples from several populations that are part of the HapMap project. PRDM16 NA12878 nssv179608 1 3204425 3204425 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv161030 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans PRDM16 essv5311128 1 3205073 3207155 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2582992 "" S 1 0 1 PRDM16 NA18507 essv34614 1 3205185 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA18502 essv4511826 1 3205391 3206316 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2000244 "" S 1 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA18507 nssv626311 1 3205467 3207548 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv511673 "" S 1 0 1 PRDM16 1 essv4748244 1 3205479 3206076 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1917341 "" S 1 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA18507 essv62523 1 3205520 3206720 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 PRDM16 NA15510 essv47309 1 3205520 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA18861 essv52452 1 3205520 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA12006 essv74973 1 3205520 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA12004 esv11880 1 3205520 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv22281 essv47309,essv37405,essv66312,essv74973,essv52452,essv69175,essv44690,essv40713,essv62523,essv34614,essv76497 M 451 0 11 PRDM16 NA11894,NA12004,NA12006,NA12044,NA12489,NA12878,NA15510,NA18502,NA18511,NA18861,NA19240 essv40713 1 3205540 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA12878 essv66312 1 3205540 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA19240 essv69175 1 3205540 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA12044 essv76497 1 3205605 3207315 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA18511 essv44690 1 3205710 3206945 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA12489 essv37405 1 3205710 3206970 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11880 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRDM16 NA11894 nssv1441696 1 3207806 3373233 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 1 0 ARHGEF16,PRDM16 nssv1441707 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441718 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441729 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441741 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441752 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441763 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441774 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441785 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441796 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441807 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441818 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441829 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv1441840 1 3207806 3373233 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830092 "" S 95 0 1 ARHGEF16,PRDM16 nssv694919 1 3217048 3218775 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv522146 "" S 2026 0 1 PRDM16 nssv1567112 1 3217048 3462788 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871552 "" S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS31045 nsv871552 1 3217048 3462788 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv95n71 nssv1567112 S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS31045 essv3584219 1 3232455 3232513 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv998521 "" S 3 0 1 PRDM16 HuRef essv3645168 1 3232469 3232528 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1330141 "" S 2 0 1 PRDM16 HuRef nssv703193 1 3248973 3249043 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv526836 "" S 2026 0 1 PRDM16 nssv1530406 1 3249229 3273388 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870990 "" S 6533 0 1 PRDM16 MS10311 nssv1546436 1 3249229 3722567 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870694 "" S 6533 0 1 ARHGEF16,CCDC27,CEP104,LOC388588,LRRC47,MEGF6,MIR551A,PRDM16,TP73,TP73-AS1,TPRG1L,WRAP73 MS17208 nsv870694 1 3249229 3722567 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv96n71 nssv1546436 S 6533 0 1 ARHGEF16,CCDC27,CEP104,LOC388588,LRRC47,MEGF6,MIR551A,PRDM16,TP73,TP73-AS1,TPRG1L,WRAP73 MS17208 nssv1572108 1 3259688 3339373 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871228 "" S 6533 0 1 PRDM16 IS32888 nssv1588169 1 3259688 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870933 "" S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS38176 nsv870933 1 3259688 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv97n71 nssv1588169 S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS38176 nssv547683 1 3262923 3284832 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PRDM16 HGDP00546 nssv1533519 1 3262923 3548088 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870630 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A,PRDM16,TPRG1L,WRAP73 MS11237 nsv870630 1 3262923 3548088 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv95n71 nssv1533519 S 6533 0 1 ARHGEF16,MEGF6,MIR551A,PRDM16,TPRG1L,WRAP73 MS11237 nssv547674 1 3265009 3326060 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PRDM16 HGDP00288 nssv547675 1 3265998 3284832 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PRDM16 HGDP00302 essv3804 1 3278798 3538713 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv12e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. ARHGEF16,MEGF6,MIR551A,PRDM16,TPRG1L,WRAP73 NA18943 esv386 1 3278798 3538713 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv12e1 "" S 271 ARHGEF16,MEGF6,MIR551A,PRDM16,TPRG1L,WRAP73 nssv536592 1 3279589 3290990 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459950 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PRDM16 HGDP00788 nssv1537043 1 3279831 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871322 "" S 6533 0 1 PRDM16 MS13095 nssv1571841 1 3279831 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871322 "" S 6533 0 1 PRDM16 IS32841 nssv1575692 1 3279831 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871322 "" S 6533 0 1 PRDM16 IS33797 nsv871322 1 3279831 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv98n71 nssv1571841,nssv1537043,nssv1575692 M 6533 0 3 PRDM16 IS32841,IS33797,MS13095 nssv1530407 1 3279831 3636151 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871020 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A,PRDM16,TP73,TPRG1L,WRAP73 MS10311 nsv871020 1 3279831 3636151 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv99n71 nssv1530407 S 6533 0 1 ARHGEF16,MEGF6,MIR551A,PRDM16,TP73,TPRG1L,WRAP73 MS10311 nssv698558 1 3283525 3284832 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv522900 "" S 2026 0 1 PRDM16 nssv1574984 1 3284282 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871692 "" S 6533 0 1 PRDM16 IS33684 nsv871692 1 3284282 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv98n71 nssv1574984 S 6533 0 1 PRDM16 IS33684 nssv1585778 1 3284282 3446452 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871407 "" S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS37646 nsv871407 1 3284282 3446452 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv97n71 nssv1585778 S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS37646 nssv547676 1 3284282 3497721 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ARHGEF16,MEGF6,MIR551A,PRDM16 HGDP00298 nssv1576879 1 3287498 3326060 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871367 "" S 6533 0 1 PRDM16 IS34304 nsv871367 1 3287498 3326060 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv100n71 nssv1576879 S 6533 0 1 PRDM16 IS34304 nssv1544216 1 3287498 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871159 "" S 6533 0 1 PRDM16 MS16315 nssv1572770 1 3287498 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871159 "" S 6533 0 1 PRDM16 IS33178 nssv1574575 1 3287498 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871159 "" S 6533 0 1 PRDM16 IS33601 nsv871159 1 3287498 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv98n71 nssv1544216,nssv1572770,nssv1574575 M 6533 0 3 PRDM16 IS33178,IS33601,MS16315 nssv1592088 1 3287498 3346265 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871241 "" S 6533 0 1 PRDM16 IS39233 nsv871241 1 3287498 3346265 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv98n71 nssv1592088 S 6533 0 1 PRDM16 IS39233 nssv1538397 1 3287498 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871718 "" S 6533 0 1 ARHGEF16,MEGF6,PRDM16 MS13727 nsv871718 1 3287498 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv97n71 nssv1538397 S 6533 0 1 ARHGEF16,MEGF6,PRDM16 MS13727 nssv1570670 1 3290667 3326060 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871054 "" S 6533 0 1 PRDM16 IS32322 nsv871054 1 3290667 3326060 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv100n71 nssv1570670 S 6533 0 1 PRDM16 IS32322 nssv1595347 1 3290667 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871347 "" S 6533 0 1 PRDM16 IS40230 nsv871347 1 3290667 3332664 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv98n71 nssv1595347 S 6533 0 1 PRDM16 IS40230 nssv1543344 1 3292731 3743673 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870633 "" S 6533 0 1 ARHGEF16,CCDC27,CEP104,LOC388588,LRRC47,MEGF6,MIR551A,PRDM16,TP73,TP73-AS1,TPRG1L,WRAP73 MS16153 nsv870633 1 3292731 3743673 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv96n71 nssv1543344 S 6533 0 1 ARHGEF16,CCDC27,CEP104,LOC388588,LRRC47,MEGF6,MIR551A,PRDM16,TP73,TP73-AS1,TPRG1L,WRAP73 MS16153 nssv1509716 1 3294876 3330715 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870935 "" S 6533 0 1 PRDM16 SP54956 nsv870935 1 3294876 3330715 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv100n71 nssv1509716 S 6533 0 1 PRDM16 SP54956 nssv700403 1 3297894 3298358 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv524467 "" S 2026 0 1 PRDM16 nssv694691 1 3297894 3304456 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521921 "" S 2026 1 0 PRDM16 nsv521921 1 3297894 3304456 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 dgv1n21 nssv694691 S 2026 1 0 PRDM16 nssv1510635 1 3297894 3330715 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871231 "" S 6533 0 1 PRDM16 SP54988 nsv871231 1 3297894 3330715 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv100n71 nssv1510635 S 6533 0 1 PRDM16 SP54988 nssv703527 1 3298358 3304456 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527139 "" S 2026 1 0 PRDM16 nsv527139 1 3298358 3304456 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 dgv1n21 nssv703527 S 2026 1 0 PRDM16 nssv1596026 1 3308392 3413327 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870718 "" S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS40396 nsv870718 1 3308392 3413327 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv101n71 nssv1596026 S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS40396 nssv1599352 1 3308392 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870839 "" S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS41634 nsv870839 1 3308392 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv101n71 nssv1599352 S 6533 0 1 ARHGEF16,MEGF6,PRDM16 IS41634 nssv1538562 1 3310659 3624520 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871154 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A,PRDM16,TP73,TPRG1L,WRAP73 MS13770 nsv871154 1 3310659 3624520 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv99n71 nssv1538562 S 6533 0 1 ARHGEF16,MEGF6,MIR551A,PRDM16,TP73,TPRG1L,WRAP73 MS13770 essv3565499 1 3324255 3329826 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1000452 "" S 3 0 1 PRDM16 HuRef essv27153 1 3339813 3340125 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv4712 "" S 1 0 1 Single Asian sample YH PRDM16 YH nssv1600509 1 3349547 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870661 "" S 6533 0 1 ARHGEF16,MEGF6 IS41894 nsv870661 1 3349547 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv102n71 nssv1600509 S 6533 0 1 ARHGEF16,MEGF6 IS41894 nssv1529773 1 3349547 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870744 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A,TP73,TP73-AS1,TPRG1L,WRAP73 MS10123 nsv870744 1 3349547 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv99n71 nssv1529773 S 6533 0 1 ARHGEF16,MEGF6,MIR551A,TP73,TP73-AS1,TPRG1L,WRAP73 MS10123 nssv1547669 1 3352116 3413327 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871243 "" S 6533 0 1 ARHGEF16,MEGF6 MS17522 nssv1574873 1 3352116 3413327 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871243 "" S 6533 0 1 ARHGEF16,MEGF6 IS33665 nssv1572109 1 3352116 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871334 "" S 6533 0 1 ARHGEF16,MEGF6 IS32888 nssv1580239 1 3352116 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871334 "" S 6533 0 1 ARHGEF16,MEGF6 IS35245 nssv1589730 1 3352116 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871334 "" S 6533 0 1 ARHGEF16,MEGF6 IS38403 nssv1589911 1 3352116 3431124 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871334 "" S 6533 1 0 ARHGEF16,MEGF6 IS38430 nssv1591438 1 3352116 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871334 "" S 6533 0 1 ARHGEF16,MEGF6 IS38840 nssv1593364 1 3352116 3440497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870845 "" S 6533 0 1 ARHGEF16,MEGF6 IS39417 nsv870845 1 3352116 3440497 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv102n71 nssv1593364 S 6533 0 1 ARHGEF16,MEGF6 IS39417 nssv1565136 1 3352116 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870940 "" S 6533 0 1 ARHGEF16,MEGF6 IS30369 nssv1595348 1 3352116 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870940 "" S 6533 0 1 ARHGEF16,MEGF6 IS40230 nssv1599099 1 3352116 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870940 "" S 6533 0 1 ARHGEF16,MEGF6 IS41410 nsv870940 1 3352116 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv102n71 nssv1565136,nssv1595348,nssv1599099 M 6533 0 3 ARHGEF16,MEGF6 IS30369,IS40230,IS41410 nssv1597258 1 3352116 3462788 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870638 "" S 6533 0 1 ARHGEF16,MEGF6 IS40799 nsv870638 1 3352116 3462788 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv102n71 nssv1597258 S 6533 0 1 ARHGEF16,MEGF6 IS40799 nssv1533733 1 3352116 3582296 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870571 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A,TP73,TPRG1L,WRAP73 MS11306 nsv870571 1 3352116 3582296 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv103n71 nssv1533733 S 6533 0 1 ARHGEF16,MEGF6,MIR551A,TP73,TPRG1L,WRAP73 MS11306 nssv1580804 1 3352116 3636151 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871793 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A,TP73,TPRG1L,WRAP73 IS35484 nsv871793 1 3352116 3636151 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv99n71 nssv1580804 S 6533 0 1 ARHGEF16,MEGF6,MIR551A,TP73,TPRG1L,WRAP73 IS35484 nssv1574985 1 3352116 3701549 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871038 "" S 6533 0 1 ARHGEF16,CCDC27,LOC388588,LRRC47,MEGF6,MIR551A,TP73,TP73-AS1,TPRG1L,WRAP73 IS33684 nsv871038 1 3352116 3701549 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv99n71 nssv1574985 S 6533 0 1 ARHGEF16,CCDC27,LOC388588,LRRC47,MEGF6,MIR551A,TP73,TP73-AS1,TPRG1L,WRAP73 IS33684 nssv1441852 1 3352798 3514176 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830203 "" S 95 0 1 ARHGEF16,MEGF6,MIR551A nssv1441863 1 3352798 3514176 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830203 "" S 95 0 1 ARHGEF16,MEGF6,MIR551A nssv178929 1 3356879 3356879 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160351 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans "" nssv1529919 1 3358003 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871336 "" S 6533 0 1 ARHGEF16,MEGF6 MS10126 nssv1584119 1 3358003 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871336 "" S 6533 0 1 ARHGEF16,MEGF6 IS36876 nssv1585612 1 3358003 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871336 "" S 6533 0 1 ARHGEF16,MEGF6 IS37577 nssv1586579 1 3358003 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871336 "" S 6533 0 1 ARHGEF16,MEGF6 IS37874 nssv1592789 1 3358003 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871336 "" S 6533 0 1 ARHGEF16,MEGF6 IS39258 nssv1594372 1 3358003 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871336 "" S 6533 0 1 ARHGEF16,MEGF6 IS39817 nssv547685 1 3358003 3431124 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ARHGEF16,MEGF6 HGDP00546 nsv871336 1 3358003 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv104n71 nssv1585612,nssv1592789,nssv1529919,nssv1584119,nssv1586579,nssv1594372 M 6533 0 6 ARHGEF16,MEGF6 IS36876,IS37577,IS37874,IS39258,IS39817,MS10126 nssv1572611 1 3358003 3446452 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871422 "" S 6533 0 1 ARHGEF16,MEGF6 IS33162 nsv871422 1 3358003 3446452 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv102n71 nssv1572611 S 6533 0 1 ARHGEF16,MEGF6 IS33162 nssv1576249 1 3358003 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871705 "" S 6533 0 1 ARHGEF16,MEGF6 IS34005 nsv871705 1 3358003 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv102n71 nssv1576249 S 6533 0 1 ARHGEF16,MEGF6 IS34005 nssv1571444 1 3358003 3456573 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871384 "" S 6533 0 1 ARHGEF16,MEGF6 IS32737 nssv1573730 1 3358003 3456573 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871384 "" S 6533 0 1 ARHGEF16,MEGF6 IS33504 nssv1578970 1 3358003 3456573 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871384 "" S 6533 0 1 ARHGEF16,MEGF6 IS35007 nssv1584761 1 3358003 3456573 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871384 "" S 6533 0 1 ARHGEF16,MEGF6 IS37172 nsv871384 1 3358003 3456573 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv102n71 nssv1571444,nssv1578970,nssv1584761,nssv1573730 M 6533 0 4 ARHGEF16,MEGF6 IS32737,IS33504,IS35007,IS37172 nssv1573161 1 3358003 3462788 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870682 "" S 6533 0 1 ARHGEF16,MEGF6 IS33248 nsv870682 1 3358003 3462788 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv102n71 nssv1573161 S 6533 0 1 ARHGEF16,MEGF6 IS33248 nssv547680 1 3358003 3483710 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ARHGEF16,MEGF6,MIR551A HGDP00657 nssv547684 1 3358003 3539057 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ARHGEF16,MEGF6,MIR551A,TPRG1L,WRAP73 HGDP00550 nssv1592089 1 3358003 3661651 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871608 "" S 6533 0 1 ARHGEF16,CCDC27,MEGF6,MIR551A,TP73,TP73-AS1,TPRG1L,WRAP73 IS39233 nsv871608 1 3358003 3661651 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv99n71 nssv1592089 S 6533 0 1 ARHGEF16,CCDC27,MEGF6,MIR551A,TP73,TP73-AS1,TPRG1L,WRAP73 IS39233 nssv1574576 1 3364220 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871094 "" S 6533 0 1 ARHGEF16,MEGF6 IS33601 nssv1576406 1 3364220 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871094 "" S 6533 0 1 ARHGEF16,MEGF6 IS34057 nsv871094 1 3364220 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv104n71 nssv1576406,nssv1574576 M 6533 0 2 ARHGEF16,MEGF6 IS33601,IS34057 nssv547681 1 3367302 3418468 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ARHGEF16,MEGF6 HGDP00978 nssv1599502 1 3367302 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870760 "" S 6533 0 1 ARHGEF16,MEGF6 IS41648 nsv870760 1 3367302 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv104n71 nssv1599502 S 6533 0 1 ARHGEF16,MEGF6 IS41648 nssv1537044 1 3367302 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870882 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A,TP73,TPRG1L,WRAP73 MS13095 nssv1544217 1 3367302 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870882 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A,TP73,TPRG1L,WRAP73 MS16315 nsv870882 1 3367302 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv103n71 nssv1537044,nssv1544217 M 6533 0 2 ARHGEF16,MEGF6,MIR551A,TP73,TPRG1L,WRAP73 MS13095,MS16315 nssv1534555 1 3371558 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871042 "" S 6533 0 1 ARHGEF16,MEGF6 MS11669 nssv1535399 1 3371558 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871042 "" S 6533 0 1 ARHGEF16,MEGF6 MS12202 nsv871042 1 3371558 3431124 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv104n71 nssv1535399,nssv1534555 M 6533 0 2 ARHGEF16,MEGF6 MS11669,MS12202 nssv1534420 1 3371558 3510731 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870733 "" S 6533 0 1 ARHGEF16,MEGF6,MIR551A MS11579 nsv870733 1 3371558 3510731 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv105n71 nssv1534420 S 6533 0 1 ARHGEF16,MEGF6,MIR551A MS11579 essv4030830 1 3381505 3381565 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1571906 "" S 2 0 1 ARHGEF16 HuRef nssv9111 1 3383352 3412874 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv299 "" S 9 1 0 Samples from several populations that are part of the HapMap project. ARHGEF16,MEGF6 NA12156 nssv1437925 1 3390933 3395478 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825031 "" S 31 1 0 Samples from several populations that are part of the HapMap project. MEGF6 NA18951 nsv825031 1 3390933 3395478 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv7n67 nssv1437925 S 31 1 0 MEGF6 NA18951 nssv1436325 1 3390933 3395522 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825142 "" S 31 1 0 Samples from several populations that are part of the HapMap project. MEGF6 NA18542 nsv825142 1 3390933 3395522 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv7n67 nssv1436325 S 31 1 0 MEGF6 NA18542 nssv1434860 1 3390933 3395784 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825253 "" S 31 0 1 Samples from several populations that are part of the HapMap project. MEGF6 NA18942 nssv1438580 1 3391024 3395491 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825364 "" S 31 1 0 Samples from several populations that are part of the HapMap project. MEGF6 NA18973 nsv825364 1 3391024 3395491 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv7n67 nssv1438580 S 31 1 0 MEGF6 NA18973 nssv4519 1 3392376 3409387 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv299 "" S 9 1 0 Samples from several populations that are part of the HapMap project. MEGF6 NA12878 nssv1586797 1 3395156 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871229 "" S 6533 0 1 MEGF6 IS37985 nsv871229 1 3395156 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv106n71 nssv1586797 S 6533 0 1 MEGF6 IS37985 nssv547677 1 3396650 3446731 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations MEGF6 HGDP00302 nssv1571842 1 3396651 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871122 "" S 6533 0 1 MEGF6 IS32841 nsv871122 1 3396651 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv106n71 nssv1571842 S 6533 0 1 MEGF6 IS32841 nssv1532357 1 3396651 3521455 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871380 "" S 6533 0 1 MEGF6,MIR551A MS10769 nsv871380 1 3396651 3521455 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv105n71 nssv1532357 S 6533 0 1 MEGF6,MIR551A MS10769 nssv1552755 1 3399728 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870890 "" S 6533 0 1 MEGF6 MS19630 nsv870890 1 3399728 3454311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv106n71 nssv1552755 S 6533 0 1 MEGF6 MS19630 nssv4678 1 3401600 3419129 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv299 "" S 9 1 0 Samples from several populations that are part of the HapMap project. MEGF6 NA19129 essv3895480 1 3408473 3408473 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1595391 "" S 2 1 0 MEGF6 HuRef nssv1417807 1 3431124 3446731 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818333 "" S 112 0 1 Samples from several populations that are part of the HapMap project. MEGF6 NA18853 nssv21442 1 3435994 3439878 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10494 "" S 31 0 1 Samples from several populations that are part of the HapMap project. MEGF6 NA18942 nssv21444 1 3435994 3441816 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10494 "" S 31 0 1 Samples from several populations that are part of the HapMap project. MEGF6 NA18975 nssv696553 1 3445617 3446452 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv519082 "" S 2026 1 0 MEGF6 nssv1500373 1 3470009 3489106 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870784 "" S 6533 0 1 MEGF6 SP50159 nssv1578971 1 3470009 3510731 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871341 "" S 6533 0 1 MEGF6 IS35007 nsv871341 1 3470009 3510731 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv107n71 nssv1578971 S 6533 0 1 MEGF6 IS35007 nssv1572612 1 3470009 3521455 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870599 "" S 6533 0 1 MEGF6 IS33162 nssv1597259 1 3470009 3521455 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870599 "" S 6533 0 1 MEGF6 IS40799 nsv870599 1 3470009 3521455 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv108n71 nssv1572612,nssv1597259 M 6533 0 2 MEGF6 IS33162,IS40799 nssv1564278 1 3470009 3548088 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871823 "" S 6533 0 1 MEGF6,TPRG1L,WRAP73 IS30197 nssv1573731 1 3470009 3722567 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871942 "" S 6533 0 1 CCDC27,CEP104,LOC388588,LRRC47,MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS33504 nssv1564417 1 3472448 3521455 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870516 "" S 6533 1 0 MEGF6 IS30210 nssv1417551 1 3476986 3500493 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818444 "" S 112 0 1 Samples from several populations that are part of the HapMap project. MEGF6 NA18971 nssv1531909 1 3476986 3510731 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871568 "" S 6533 0 1 MEGF6 MS10698 nsv871568 1 3476986 3510731 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv107n71 nssv1531909 S 6533 0 1 MEGF6 MS10698 nssv1598372 1 3476986 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871297 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS41243 nsv871297 1 3476986 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv109n71 nssv1598372 S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS41243 nssv1570671 1 3476986 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870800 "" S 6533 0 1 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS32322 nssv1571843 1 3476986 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870800 "" S 6533 0 1 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS32841 nssv1576880 1 3476986 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870800 "" S 6533 0 1 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS34304 nssv1585779 1 3476986 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870800 "" S 6533 0 1 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS37646 nsv870800 1 3476986 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv110n71 nssv1585779,nssv1570671,nssv1576880,nssv1571843 M 6533 0 4 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS32322,IS32841,IS34304,IS37646 nssv1572255 1 3480967 3536795 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870915 "" S 6533 0 1 MEGF6,TPRG1L IS32918 nsv870915 1 3480967 3536795 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv108n71 nssv1572255 S 6533 0 1 MEGF6,TPRG1L IS32918 nssv1578779 1 3480967 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871408 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS34908 nsv871408 1 3480967 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv109n71 nssv1578779 S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS34908 nssv547682 1 3480967 3640986 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations MEGF6,TP73,TPRG1L,WRAP73 HGDP00825 essv3570647 1 3485168 3485168 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1003247 "" S 3 1 0 MEGF6 HuRef essv3621012 1 3485189 3485189 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1491138 "" S 2 1 0 MEGF6 HuRef essv5366115 1 3489252 3492632 CNV Loss McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2470115 "" S 1 0 1 MEGF6 NA18507 essv70884 1 3489592 3490336 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13258 "" S 451 0 1 Samples from several populations that are part of the HapMap project. MEGF6 NA18916 essv47236 1 3489592 3490491 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13258 "" S 451 0 1 Samples from several populations that are part of the HapMap project. MEGF6 NA18861 esv13258 1 3489592 3490491 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28730 essv47236,essv70884,essv44169 M 451 0 3 MEGF6 NA12489,NA18861,NA18916 essv44169 1 3489691 3490336 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13258 "" S 451 0 1 Samples from several populations that are part of the HapMap project. MEGF6 NA12489 essv4165604 1 3489887 3489959 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1062679 "" S 2 0 1 MEGF6 HuRef nssv1571445 1 3490094 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871086 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS32737 nssv1596364 1 3490094 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871086 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS40502 nsv871086 1 3490094 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv109n71 nssv1596364,nssv1571445 M 6533 0 2 MEGF6,TP73,TPRG1L,WRAP73 IS32737,IS40502 nssv1572110 1 3492138 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871397 "" S 6533 0 1 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS32888 nsv871397 1 3492138 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv110n71 nssv1572110 S 6533 0 1 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS32888 essv4183764 1 3494306 3494306 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1072885 "" S 2 1 0 MEGF6 HuRef nssv178903 1 3494307 3494307 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160325 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans MEGF6 nssv1574874 1 3497721 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871674 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS33665 nssv1592790 1 3497721 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871674 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS39258 nsv871674 1 3497721 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv109n71 nssv1574874,nssv1592790 M 6533 0 2 MEGF6,TP73,TPRG1L,WRAP73 IS33665,IS39258 nssv1573520 1 3497721 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871095 "" S 6533 0 1 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS33455 nsv871095 1 3497721 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv110n71 nssv1573520 S 6533 0 1 MEGF6,TP73,TP73-AS1,TPRG1L,WRAP73 IS33455 nssv179564 1 3498049 3498114 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160986 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans MEGF6 nssv179199 1 3498071 3498136 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160621 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans MEGF6 essv4161797 1 3498280 3498346 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1645766 "" S 2 0 1 MEGF6 HuRef nssv1599100 1 3501155 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870834 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS41410 nsv870834 1 3501155 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv109n71 nssv1599100 S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS41410 nssv1595349 1 3501155 3627319 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870737 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS40230 nsv870737 1 3501155 3627319 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv111n71 nssv1595349 S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS40230 nssv1510636 1 3501426 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871615 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 SP54988 nsv871615 1 3501426 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv109n71 nssv1510636 S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 SP54988 nssv1534673 1 3502660 3582296 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871548 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 MS11726 nsv871548 1 3502660 3582296 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv112n71 nssv1534673 S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 MS11726 nssv1577276 1 3510731 3582296 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871461 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS34407 nssv1588170 1 3510731 3582296 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871461 "" S 6533 0 1 MEGF6,TP73,TPRG1L,WRAP73 IS38176 nsv871461 1 3510731 3582296 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv112n71 nssv1588170,nssv1577276 M 6533 0 2 MEGF6,TP73,TPRG1L,WRAP73 IS34407,IS38176 nssv547679 1 3521455 3624519 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations TP73,TPRG1L,WRAP73 HGDP00288 nssv1576668 1 3521455 3627319 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870588 "" S 6533 0 1 TP73,TPRG1L,WRAP73 IS34235 nsv870588 1 3521455 3627319 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv111n71 nssv1576668 S 6533 0 1 TP73,TPRG1L,WRAP73 IS34235 nssv1509717 1 3530234 3562634 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870859 "" S 6533 0 1 TP73,TPRG1L,WRAP73 SP54956 nssv10069 1 3541511 3573504 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv410 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TP73,WRAP73 NA18956 essv4665883 1 3546704 3547177 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2247294 "" S 1 0 1 Samples from several populations that are part of the HapMap project. WRAP73 NA18507 essv5381740 1 3549596 3551258 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2489412 "" S 1 0 1 WRAP73 NA18507 essv63082 1 3550105 3550815 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11696 "" S 451 0 1 WRAP73 NA15510 esv11696 1 3550105 3550815 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv29463 essv63082 S 451 0 1 WRAP73 NA15510 essv3571323 1 3550307 3550816 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1007908 "" S 3 0 1 WRAP73 HuRef nssv1441874 1 3567200 3710699 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 1 0 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441885 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441896 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441907 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441918 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441929 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441940 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441951 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441963 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441974 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441985 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 nssv1441996 1 3567200 3710699 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830314 "" S 95 0 1 CCDC27,LOC388588,LRRC47,TP73,TP73-AS1 essv20812 1 3574901 3645396 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv13e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. TP73,TP73-AS1 NA10855 esv1254 1 3574901 3645396 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv13e1 "" S 271 TP73,TP73-AS1 nssv1571446 1 3582296 3647619 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870551 "" S 6533 0 1 TP73,TP73-AS1 IS32737 nsv870551 1 3582296 3647619 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv113n71 nssv1571446 S 6533 0 1 TP73,TP73-AS1 IS32737 nssv1564279 1 3586877 3647619 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870500 "" S 6533 0 1 TP73,TP73-AS1 IS30197 nssv1589594 1 3586877 3647619 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870500 "" S 6533 0 1 TP73,TP73-AS1 IS38388 nsv870500 1 3586877 3647619 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv113n71 nssv1589594,nssv1564279 M 6533 0 2 TP73,TP73-AS1 IS30197,IS38388 nssv536686 1 3586877 3661651 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460061 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations CCDC27,TP73,TP73-AS1 HGDP00787 nssv1533520 1 3586877 3685860 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870977 "" S 6533 0 1 CCDC27,LOC388588,TP73,TP73-AS1 MS11237 nssv1586798 1 3590983 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870960 "" S 6533 0 1 TP73,TP73-AS1 IS37985 nsv870960 1 3590983 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv113n71 nssv1586798 S 6533 0 1 TP73,TP73-AS1 IS37985 essv4024850 1 3600206 3600206 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1394802 "" S 2 1 0 TP73 HuRef essv3640841 1 3600542 3600542 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1032022 "" S 2 1 0 TP73 HuRef essv4358577 1 3600687 3600687 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1115862 "" S 2 1 0 TP73 HuRef essv3887450 1 3600759 3601179 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1634361 "" S 2 0 1 TP73 HuRef nssv547686 1 3601752 3669634 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470687 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations CCDC27,TP73,TP73-AS1 HGDP00550 nssv1574105 1 3606461 3652705 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871368 "" S 6533 0 1 TP73,TP73-AS1 IS33514 nssv1500428 1 3620336 3643286 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871021 "" S 6533 0 1 TP73,TP73-AS1 SP50159 essv3565096 1 3641983 3645230 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv994567 "" S 3 0 1 TP73,TP73-AS1 HuRef nssv1442007 1 3647313 3748249 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830425 "" S 95 1 0 CCDC27,CEP104,LOC388588,LRRC47,TP73-AS1 nssv1530408 1 3647619 3777609 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871323 "" S 6533 0 1 CCDC27,CEP104,DFFB,LOC388588,LRRC47,TP73-AS1 MS10311 nssv1555521 1 3674045 3738373 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871435 "" S 6533 0 1 CCDC27,CEP104,LOC388588,LRRC47 MS21402 nsv871435 1 3674045 3738373 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv114n71 nssv1555521 S 6533 0 1 CCDC27,CEP104,LOC388588,LRRC47 MS21402 nssv1532358 1 3674045 3743673 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871693 "" S 6533 0 1 CCDC27,CEP104,LOC388588,LRRC47 MS10769 nsv871693 1 3674045 3743673 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv114n71 nssv1532358 S 6533 0 1 CCDC27,CEP104,LOC388588,LRRC47 MS10769 essv4118454 1 3704149 3704149 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1678500 "" S 2 1 0 "" HuRef essv4015442 1 3706801 3706951 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1763700 "" S 2 0 1 "" HuRef nssv623769 1 3732881 3808916 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509590 "" S 4 1 0 Samples from several populations that are part of the HapMap project. C1orf174,CEP104,DFFB,LOC100133612 NA18994 essv4952306 1 3738731 3739075 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1948239 "" S 1 0 1 Samples from several populations that are part of the HapMap project. CEP104 NA18507 essv3942170 1 3738857 3738857 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1074506 "" S 2 1 0 CEP104 HuRef nssv178422 1 3749765 3751122 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159844 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans CEP104 essv4229403 1 3775096 3775096 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1467252 "" S 2 1 0 DFFB HuRef essv3580646 1 3780687 3780843 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1008825 "" S 3 0 1 DFFB HuRef essv4131794 1 3780687 3780844 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1273516 "" S 2 0 1 DFFB HuRef essv3585949 1 3780687 3780921 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv992605 "" S 3 0 1 DFFB HuRef essv54452 1 3798297 3799062 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16927 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf174 NA19099 essv72105 1 3798297 3799062 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16927 "" S 451 1 0 Samples from several populations that are part of the HapMap project. C1orf174 NA19225 esv16927 1 3798297 3799062 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26417 essv54452,essv72105 M 451 2 0 C1orf174 NA19099,NA19225 essv4067715 1 3798844 3798936 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1352346 "" S 2 0 1 C1orf174 HuRef nssv536774 1 3913951 3980640 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460172 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00586 nssv1543345 1 3915242 3989473 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871603 "" S 6533 0 1 "" MS16153 nssv1546437 1 3916997 4028383 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870560 "" S 6533 0 1 "" MS17208 nssv1327 1 3943724 3947893 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv521 "" S 9 1 0 Samples from several populations that are part of the HapMap project. "" NA19240 essv70379 1 3944616 3945124 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11152 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18916 esv11152 1 3944616 3945124 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26736 essv70379 S 451 0 1 "" NA18916 essv3578431 1 3959687 3959804 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1003004 "" S 3 0 1 "" HuRef essv3880229 1 3959695 3959813 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1647727 "" S 2 0 1 "" HuRef nssv177741 1 3959696 3959813 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159163 "" M 24 "" nssv1522410 1 4011047 4113891 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870482 "" S 6533 0 1 "" SP53023 nssv1506178 1 4011047 4199587 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871931 "" S 6533 0 1 "" SP54050 nssv1512042 1 4011047 4199587 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871931 "" S 6533 0 1 "" SP55265 nssv1517277 1 4011047 4199587 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871931 "" S 6533 0 1 "" SP57243 nssv1523532 1 4011047 4199587 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870878 "" S 6533 0 1 "" SP54072 nsv870878 1 4011047 4199587 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv115n71 nssv1523532 S 6533 0 1 "" SP54072 nsv871931 1 4011047 4199587 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv115n71 nssv1512042,nssv1517277,nssv1506178 M 6533 0 3 "" SP54050,SP55265,SP57243 nssv1520314 1 4011047 4200666 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870662 "" S 6533 0 1 "" SP50822 nssv1521727 1 4011047 4200666 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870662 "" S 6533 0 1 "" SP52562 nssv1524099 1 4011047 4200666 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870662 "" S 6533 0 1 "" SP54845 nsv870662 1 4011047 4200666 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv115n71 nssv1524099,nssv1520314,nssv1521727 M 6533 0 3 "" SP50822,SP52562,SP54845 nssv1528359 1 4011047 4212065 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871031 "" S 6533 0 1 "" SP81203 nsv871031 1 4011047 4212065 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv115n71 nssv1528359 S 6533 0 1 "" SP81203 nssv536884 1 4017414 4199587 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460283 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00817 nssv697551 1 4020171 4022959 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520675 "" S 2026 0 1 "" essv59365 1 4023703 4027828 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12064 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19108 esv12064 1 4023703 4027828 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21720 essv59365,essv79787,essv40205 M 451 0 3 "" NA12749,NA12878,NA19108 essv40205 1 4024118 4027743 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12064 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12878 essv79787 1 4024118 4027828 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12064 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12749 essv27644 1 4024404 4024858 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv5203 "" S 1 0 1 Single Asian sample YH "" YH nssv626312 1 4025102 4025799 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv511674 "" S 1 0 1 "" 1 essv3810874 1 4025195 4025292 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1280652 "" S 2 0 1 "" HuRef essv28205 1 4026050 4026650 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv5764 "" S 1 0 1 "" SJK essv42241 1 4036538 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18505 essv42739 1 4036853 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18909 essv75252 1 4036853 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12004 esv16191 1 4036853 4038828 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23365 essv36136,essv42739,essv70677,essv55546,essv75252,essv52683,essv61215,essv38993,essv44465,essv42241,essv67841 M 451 0 11 "" NA12004,NA12006,NA12239,NA12287,NA12489,NA18505,NA18858,NA18907,NA18909,NA18916,NA19099 essv38993 1 4037103 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12287 essv61215 1 4037103 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12239 essv36136 1 4037103 4038828 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18907 essv52683 1 4037153 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12006 essv70677 1 4037153 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18916 essv67841 1 4037153 4038828 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18858 essv3578155 1 4037161 4037566 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1000769 "" S 3 0 1 "" HuRef essv44465 1 4037228 4038828 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12489 essv3668289 1 4037241 4037647 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1100125 "" S 2 0 1 "" HuRef essv55546 1 4037288 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16191 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19099 essv32891 1 4037678 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13534 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19147 essv66435 1 4037678 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13534 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12828 esv13534 1 4037678 4038778 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23365 essv32891,essv66435 M 451 0 2 "" NA12828,NA19147 nssv1420735 1 4037678 4038778 CNV Duplication Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv821406 "" S 1 1 0 Samples from several populations that are part of the HapMap project. "" NA10851 essv4227901 1 4038421 4038421 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1767486 "" S 2 1 0 "" HuRef nssv619763 1 4042750 4119760 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv509701 "" S 4 1 0 Samples from several populations that are part of the HapMap project. "" NA10860 essv5194644 1 4054369 4055994 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2637444 "" S 1 0 1 "" NA18507 essv4563770 1 4054830 4055525 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2259067 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv26328 1 4054909 4055444 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv3887 "" S 1 0 1 Single Asian sample YH "" YH essv29787 1 4055023 4055323 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv7346 "" S 1 0 1 "" SJK essv4248978 1 4096657 4096657 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1112137 "" S 2 1 0 "" HuRef essv30155 1 4104361 4104429 CNV Gain Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv7714 "" S 1 1 0 "" SJK essv5231288 1 4104535 4104584 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2619231 "" S 1 0 1 "" NA18507 nssv703573 1 4116722 4126954 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527177 "" S 2026 0 1 "" nssv1522411 1 4127324 4200666 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871697 "" S 6533 0 1 "" SP53023 nssv1442018 1 4139870 4285041 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830536 "" S 95 1 0 "" nssv1517006 1 4163857 4208143 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871218 "" S 6533 0 1 "" SP57027 nssv1442029 1 4177167 4347440 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830647 "" S 95 1 0 "" essv66246 1 4184495 4185865 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14207 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19240 esv14207 1 4184495 4185865 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25427 essv66246 S 451 0 1 "" NA19240 essv2493758 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA18517 essv2497030 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA19190 essv2498257 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA19240 essv2498493 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA18858 essv2499471 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA12044 essv2501977 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA19239 essv2504302 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA18505 essv2506563 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA19108 essv2507275 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA18870 essv2507417 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA18912 essv2509525 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA19129 essv2510776 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA18501 essv2511379 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA11920 essv2512043 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA19238 essv2512478 1 4188287 4188632 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv272116 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA18489 essv2583870 1 4188288 4188633 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv273348 "" S 7 1 0 Samples from several populations that are part of the HapMap project. "" NA19240 essv2584271 1 4188288 4188633 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv273348 "" S 7 1 0 Samples from several populations that are part of the HapMap project. "" NA19238 essv2584599 1 4188288 4188633 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv273348 "" S 7 1 0 Samples from several populations that are part of the HapMap project. "" NA19239 nssv1554375 1 4243808 4622906 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871137 "" S 6533 1 0 AJAP1,LOC284661 MS20753 nssv178226 1 4262904 4262904 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159648 "" M 24 "" essv83596 1 4291441 4293588 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14362 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19190 esv14362 1 4291441 4293588 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28339 essv83596,essv62680 M 451 0 2 "" NA15510,NA19190 essv62680 1 4291666 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14362 "" S 451 0 1 "" NA15510 essv37456 1 4292281 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11894 essv45882 1 4292281 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19129 essv73012 1 4292281 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19225 esv17217 1 4292281 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28339 essv47209,essv36300,essv42763,essv70518,essv54598,essv59136,essv37456,essv82074,essv51062,essv45882,essv33593,essv73012,essv65261,essv38728,essv39715,essv76306,essv44905,essv66572,essv40540,essv41941,essv77270,essv49554 M 451 0 22 "" NA11894,NA11931,NA12287,NA12414,NA12489,NA12828,NA12878,NA18505,NA18511,NA18517,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19129,NA19147,NA19225,NA19240,NA19257 essv33593 1 4292281 4293528 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19147 essv36300 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18907 essv39715 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12287 essv41941 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18505 essv42763 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18909 essv47209 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18861 essv54598 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19099 essv59136 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19108 essv65261 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19240 essv77270 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18511 essv82074 1 4292341 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19114 essv76306 1 4292341 4293528 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12414 nssv626587 1 4292371 4295672 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina HumanOmni1-Quad BeadChip nsv511131 "" S 1 0 1 "" 1 essv38728 1 4292398 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19257 essv40540 1 4292398 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12878 essv51062 1 4292398 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA11931 essv66572 1 4292398 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12828 essv70518 1 4292398 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18916 essv49554 1 4292580 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18517 essv44905 1 4292746 4293483 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17217 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12489 essv47331 1 4293528 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19856 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18861 esv19856 1 4293528 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28339 essv47331 S 451 1 0 "" NA18861 essv5228093 1 4296153 4296861 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2505018 "" S 1 1 0 "" NA18507 essv3918928 1 4296448 4296448 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1619694 "" S 2 1 0 "" HuRef essv37969 1 4302670 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19257 esv17261 1 4302670 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28339 essv37969 S 451 1 0 "" NA19257 essv67952 1 4303215 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11599 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18858 esv11599 1 4303215 4304135 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28339 essv77786,essv36059,essv43135,essv83906,essv71695,essv39161,essv67952 M 451 7 0 "" NA06985,NA12287,NA18858,NA18907,NA18909,NA19190,NA19225 essv36059 1 4303405 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11599 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18907 essv39161 1 4303405 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11599 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12287 essv43135 1 4303405 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11599 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA18909 essv71695 1 4303405 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11599 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19225 essv83906 1 4303405 4304050 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11599 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19190 essv77786 1 4303405 4304135 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11599 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA06985 essv2585519 1 4320920 4323975 CNV Loss Banerjee et al 2011 21479260 SNP_array Affymetrix SNP 6.0 esv275066 "" S 1250 0 1 "" nssv1442040 1 4347441 4569221 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830759 "" S 95 0 1 LOC284661 nssv1442051 1 4347441 4569221 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830759 "" S 95 0 1 LOC284661 essv4764956 1 4380017 4380434 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2213507 "" S 1 0 1 Samples from several populations that are part of the HapMap project. LOC284661 NA18507 essv4354508 1 4380214 4380276 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1543124 "" S 2 0 1 LOC284661 HuRef essv2579261 1 4431874 4432099 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv274284 "" S 7 1 0 Samples from several populations that are part of the HapMap project. "" NA19239 essv2579740 1 4431874 4432099 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv274284 "" S 7 1 0 Samples from several populations that are part of the HapMap project. "" NA19240 nssv536980 1 4473849 4491976 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460394 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP01098 nssv1558401 1 4478355 4568530 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871602 "" S 6533 1 0 "" MS23257 essv3586737 1 4495890 4501949 CNV Loss Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv1006796 "" S 3 0 1 "" HuRef essv47021 1 4497777 4503228 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13444 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18861 esv13444 1 4497777 4503228 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21437 essv47021 S 451 0 1 "" NA18861 essv5375102 1 4503150 4504226 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2469165 "" S 1 1 0 "" NA18507 essv3569284 1 4503622 4503622 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv995887 "" S 3 1 0 "" HuRef essv3924372 1 4503642 4503642 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1262838 "" S 2 1 0 "" HuRef nssv1543346 1 4573797 4617251 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871520 "" S 6533 0 1 AJAP1 MS16153 essv4895725 1 4576173 4576682 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2398993 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 nssv1433404 1 4612979 4617295 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825475 "" S 31 1 0 Samples from several populations that are part of the HapMap project. AJAP1 NA18526 nssv1505399 1 4634374 4663261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871046 "" S 6533 0 1 AJAP1 SP53458 essv3565733 1 4634634 4637986 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1009421 "" S 3 0 1 AJAP1 HuRef nssv537066 1 4637391 4653917 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460505 "" S 1557 0 1 AJAP1 1780862093_A nssv701964 1 4647597 4648165 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520031 "" S 2026 0 1 AJAP1 nssv660165 1 4647597 4650890 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520031 "" S 2026 0 1 AJAP1 nssv683157 1 4647597 4650890 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520031 "" S 2026 0 1 AJAP1 nssv694458 1 4647597 4672577 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521535 "" S 2026 0 1 AJAP1 nssv537158 1 4650890 4686979 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460617 "" S 1557 0 1 AJAP1 NINDS_66 nssv1442062 1 4695246 4881159 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830870 "" S 95 0 1 AJAP1 essv5191133 1 4700006 4701050 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2651800 "" S 1 1 0 AJAP1 NA18507 nssv1442074 1 4722125 4898111 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv830981 "" S 95 1 0 AJAP1 nssv1533734 1 4761020 4794660 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870493 "" S 6533 0 1 "" MS11306 nssv697933 1 4772431 4774365 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521327 "" S 2026 0 1 "" nssv2960 1 4809273 4813432 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv632 "" S 9 1 0 Samples from several populations that are part of the HapMap project. "" NA18555 nssv682279 1 4931239 4951570 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521101 "" S 2026 0 1 "" nssv687649 1 4931239 4954210 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521101 "" S 2026 0 1 "" essv5225073 1 4953212 4954328 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2483299 "" S 1 0 1 "" NA18507 nssv701747 1 4968070 4968815 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv525603 "" S 2026 0 1 "" essv101012 1 4980521 5069143 CNV Loss de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32797 "" S 51 0 1 "" 21693 essv2501380 1 4989857 4990019 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv271127 "" S 157 1 0 Samples from several populations that are part of the HapMap project. "" NA19093 nssv1553386 1 5003897 5081475 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870969 "" S 6533 1 0 "" MS20009 nssv1555685 1 5003897 5081475 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870969 "" S 6533 1 0 "" MS21515 nssv1575977 1 5003897 5081475 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870969 "" S 6533 1 0 "" IS33850 nsv870969 1 5003897 5081475 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv116n71 nssv1553386,nssv1575977,nssv1555685 M 6533 3 0 "" IS33850,MS20009,MS21515 nssv699556 1 5013771 5070572 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv523740 "" S 2026 1 0 "" nssv537339 1 5013771 5073664 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460839 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00529 nssv1515700 1 5013962 5081475 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870687 "" S 6533 1 0 "" SP56248 nsv870687 1 5013962 5081475 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv116n71 nssv1515700 S 6533 1 0 "" SP56248 essv4201133 1 5035641 5035641 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1109223 "" S 2 1 0 "" HuRef nssv697576 1 5051105 5064284 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520723 "" S 2026 1 0 "" essv5197882 1 5071907 5072624 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2532762 "" S 1 1 0 "" NA18507 essv3630167 1 5072350 5072350 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1289856 "" S 2 1 0 "" HuRef essv5250667 1 5080714 5080790 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2464561 "" S 1 0 1 "" NA18507 essv65235 1 5096531 5097274 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13523 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19240 esv13523 1 5096531 5097274 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27138 essv65235 S 451 0 1 "" NA19240 essv5290540 1 5120011 5120756 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2465114 "" S 1 1 0 "" NA18507 essv25359 1 5120121 5120467 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv2918 "" S 1 0 1 Single Asian sample YH "" YH nssv697864 1 5183802 5186968 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521242 "" S 2026 0 1 "" essv2534 1 5189627 5459265 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv14e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. "" NA19003 esv329 1 5189627 5459265 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv14e1 "" S 271 "" nssv1540994 1 5198919 5220394 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870776 "" S 6533 0 1 "" MS15145 essv4703012 1 5205884 5206310 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1963263 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 nssv537425 1 5230617 5248130 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460950 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00998 nssv21430 1 5293450 5294873 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10605 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA12802 nssv24593 1 5293450 5294873 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10605 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA07029 nssv28532 1 5293450 5294873 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10605 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA07048 nssv29260 1 5293450 5294873 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10605 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA18504 essv4831068 1 5396616 5397044 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2259894 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 nssv179185 1 5396755 5396828 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160607 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans "" essv4224996 1 5396817 5396892 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1028089 "" S 2 0 1 "" HuRef nssv26903 1 5397617 5399397 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv10716 "" S 31 1 0 Samples from several populations that are part of the HapMap project. "" NA19221 nssv1442085 1 5415955 5566331 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831092 "" S 95 1 0 MIR4417 essv5236789 1 5482096 5482197 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2607553 "" S 1 0 1 "" NA18507 nssv704192 1 5546270 5548153 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527712 "" S 2026 0 1 MIR4417 nssv656507 1 5547116 5548075 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv519513 "" S 2026 0 1 "" nssv657312 1 5547116 5548075 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv519513 "" S 2026 0 1 "" nssv658059 1 5547116 5548075 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv519513 "" S 2026 0 1 "" nsv519513 1 5547116 5548075 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 dgv2n21 nssv657312,nssv658059,nssv656507 M 2026 0 3 "" nssv702233 1 5547116 5548153 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv526005 "" S 2026 0 1 "" nsv526005 1 5547116 5548153 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 dgv2n21 nssv702233 S 2026 0 1 "" nssv1503204 1 5550499 5566345 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871264 "" S 6533 0 1 "" SP52003 essv3577403 1 5575936 5575936 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1008325 "" S 3 1 0 "" HuRef essv3729262 1 5575937 5575937 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1402936 "" S 2 1 0 "" HuRef essv4655011 1 5585810 5586177 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2165265 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv5341576 1 5586421 5586481 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2622825 "" S 1 0 1 "" NA18507 essv5304912 1 5654415 5657276 CNV Gain McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2474640 "" S 1 1 0 "" NA18507 nssv1537045 1 5671670 5745956 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871747 "" S 6533 0 1 "" MS13095 nssv698792 1 5681359 5687940 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv523099 "" S 2026 1 0 "" nssv698329 1 5713085 5713242 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521706 "" S 2026 1 0 "" essv4933008 1 5726629 5727090 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2165525 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 nssv547687 1 5733711 5836208 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470688 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00546 nssv547688 1 5733711 5836208 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470688 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00550 nssv619764 1 5759862 5849454 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508723 "" S 4 1 0 Samples from several populations that are part of the HapMap project. MIR4689,NPHP4 NA10860 nssv623770 1 5759862 5849454 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508723 "" S 4 1 0 Samples from several populations that are part of the HapMap project. MIR4689,NPHP4 NA18994 essv5245268 1 5785240 5785988 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2444036 "" S 1 1 0 "" NA18507 essv5391968 1 5791947 5792087 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2487333 "" S 1 0 1 "" NA18507 essv52716 1 5799180 5799880 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16704 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12006 essv52791 1 5799180 5800109 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16704 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18508 esv16704 1 5799180 5800109 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28776 essv52716,essv52791,essv59585 M 451 0 3 "" NA12006,NA18508,NA18523 essv33706 1 5799180 5800435 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10860 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19147 essv41030 1 5799180 5800681 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10860 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12878 esv10860 1 5799180 5800681 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28776 essv33706,essv41030 M 451 0 2 "" NA12878,NA19147 essv59585 1 5799225 5800109 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16704 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18523 essv44272 1 5799545 5800190 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18182 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12489 esv18182 1 5799545 5800190 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28776 essv63909,essv44272 M 451 0 2 "" NA07045,NA12489 essv63909 1 5799560 5800190 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18182 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA07045 nssv1538563 1 5809727 5867308 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871294 "" S 6533 0 1 MIR4689,NPHP4 MS13770 nssv1549599 1 5809727 5867308 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871294 "" S 6533 0 1 MIR4689,NPHP4 MS18276 nssv1442096 1 5812677 5950549 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831203 "" S 95 0 1 MIR4689,NPHP4 nssv1442107 1 5812677 5950549 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831203 "" S 95 0 1 MIR4689,NPHP4 nssv1442118 1 5812677 5950549 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831203 "" S 95 0 1 MIR4689,NPHP4 essv5176671 1 5814791 5815226 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2494780 "" S 1 1 0 "" NA18507 nssv625336 1 5814902 5815025 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512712 "" S 1 1 0 "" 1 essv4159802 1 5814954 5814954 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1660216 "" S 2 1 0 "" HuRef nssv1597260 1 5825820 5856823 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871389 "" S 6533 0 1 MIR4689,NPHP4 IS40799 nssv695820 1 5828924 5836208 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv518390 "" S 2026 1 0 "" nssv1530409 1 5828924 6167730 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871082 "" S 6533 0 1 CHD5,KCNAB2,MIR4689,NPHP4,RPL22 MS10311 nssv1532359 1 5836208 5922716 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871579 "" S 6533 0 1 MIR4689,NPHP4 MS10769 nssv619765 1 5849454 5954595 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508723 "" S 4 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA10860 nssv1423942 1 5856348 5857220 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825586 "" S 31 0 1 Samples from several populations that are part of the HapMap project. NPHP4 NA18582 essv2520239 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12815 essv2520650 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12716 essv2521758 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12144 essv2525217 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12156 essv2526292 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA11918 essv2526664 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA19114 essv2528121 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18907 essv2528266 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12891 essv2531812 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12006 essv2533980 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18916 essv2534982 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12249 essv2537008 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18517 essv2537454 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12878 essv2538004 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA07000 essv2538589 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA19108 essv2538991 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18519 essv2542430 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA11919 essv2544022 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA11992 essv2546492 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA11881 essv2546759 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12892 essv2548522 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12045 essv2548990 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA07037 essv2550074 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18511 essv2550523 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12155 essv2551010 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18858 essv2552344 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18502 essv2556816 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA11994 essv2556995 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18501 essv2557449 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18499 essv2560424 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA19190 essv2560651 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA19116 essv2560838 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA19137 essv2561318 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18523 essv2563519 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA10847 essv2565503 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12812 essv2566798 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18853 essv2568304 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA11995 essv2576291 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12814 essv2577574 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12043 essv2577694 1 5856856 5857155 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv267940 "" S 157 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12761 essv2581767 1 5856861 5857150 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv274438 "" S 7 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12878 essv2582322 1 5856861 5857150 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv274438 "" S 7 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12891 essv2582865 1 5856861 5857150 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv274438 "" S 7 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA12892 nssv1442129 1 5872056 6045644 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831314 "" S 95 0 1 KCNAB2,NPHP4 nssv1442140 1 5872056 6045644 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831314 "" S 95 0 1 KCNAB2,NPHP4 nssv1442151 1 5872056 6045644 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831314 "" S 95 0 1 KCNAB2,NPHP4 nssv1442162 1 5872056 6045644 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831314 "" S 95 0 1 KCNAB2,NPHP4 nssv9178 1 5884716 5929974 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv743 "" S 9 0 1 Samples from several populations that are part of the HapMap project. NPHP4 NA12156 nssv1534674 1 5922716 6010951 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870809 "" S 6533 0 1 KCNAB2,NPHP4 MS11726 nssv623262 1 5958193 5964193 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv506919 "" S 4 1 0 Samples from several populations that are part of the HapMap project. NPHP4 NA18994 essv100607 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 22298 essv101040 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21693 essv101160 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21618 essv92517 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 22233 essv92840 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21939 essv93021 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21863 essv93510 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 22128 essv94307 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21808 essv94480 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21932 essv94798 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21791 essv95744 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21841 essv97100 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 22075 essv97813 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 21837 essv99200 1 5959222 5961018 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv33437 "" S 51 1 0 NPHP4 22275 nssv697281 1 5965521 5968851 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520207 "" S 2026 0 1 NPHP4 nssv1549600 1 5968851 6135457 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871226 "" S 6533 0 1 CHD5,KCNAB2,NPHP4 MS18276 essv5382298 1 5987298 5989575 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2470104 "" S 1 0 1 KCNAB2 NA18507 essv52428 1 5987337 5988217 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17376 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KCNAB2 NA12006 esv17376 1 5987337 5988217 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv22772 essv52428 S 451 0 1 KCNAB2 NA12006 essv36767 1 5987337 5989397 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA11894 essv48049 1 5987537 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA18861 esv15196 1 5987537 5989427 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv22772 essv48049,essv77493,essv42870,essv36767,essv81810,essv33293,essv56907,essv83691,essv65930,essv73252,essv38935,essv76445,essv67438,essv63022,essv53595,essv77191,essv49585,essv68019 M 451 18 0 KCNAB2 NA06985,NA11894,NA11993,NA12156,NA12287,NA12414,NA12828,NA15510,NA18508,NA18511,NA18517,NA18858,NA18861,NA18909,NA19114,NA19147,NA19190,NA19240 essv33293 1 5987632 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA19147 essv81810 1 5987632 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA19114 essv77191 1 5987632 5989397 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA18511 essv38935 1 5987632 5989427 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA12287 essv42870 1 5987672 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA18909 essv77493 1 5987672 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA06985 essv56907 1 5987672 5989397 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA11993 essv67438 1 5987672 5989397 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA12828 essv49585 1 5987717 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA18517 essv63022 1 5987717 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 KCNAB2 NA15510 essv68019 1 5987717 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA18858 essv73252 1 5987717 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA12156 essv76445 1 5987717 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA12414 essv65930 1 5987717 5989397 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA19240 essv83691 1 5987717 5989397 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA19190 essv53595 1 5987717 5989427 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15196 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA18508 nssv177842 1 5987880 5988077 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159264 "" M 24 KCNAB2 nssv626313 1 5988444 5989387 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv511675 "" S 1 0 1 KCNAB2 1 essv29675 1 5988558 5989006 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv7234 "" S 1 0 1 KCNAB2 SJK essv40850 1 5988607 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA12878 essv41148 1 5988607 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA18505 essv49120 1 5988607 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA07037 essv54570 1 5988607 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA19099 essv64206 1 5988607 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA07045 essv72341 1 5988607 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA19225 essv79025 1 5988607 5989307 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA12749 essv75161 1 5988607 5989397 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA12004 essv71384 1 5988607 5989520 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19261 "" S 451 1 0 Samples from several populations that are part of the HapMap project. KCNAB2 NA18916 esv19261 1 5988607 5989520 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv22772 essv49120,essv71384,essv54570,essv64206,essv72341,essv75161,essv79025,essv40850,essv41148 M 451 9 0 KCNAB2 NA07037,NA07045,NA12004,NA12749,NA12878,NA18505,NA18916,NA19099,NA19225 nssv626143 1 5988686 5993457 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina HumanOmni1-Quad BeadChip nsv511127 "" S 1 0 1 KCNAB2 1 nssv1546438 1 6010951 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871698 "" S 6533 0 1 ACOT7,CHD5,ESPN,GPR153,HES2,HES3,ICMT,KCNAB2,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 MS17208 nssv537694 1 6030964 6106679 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv461283 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations CHD5,KCNAB2 HGDP00491 nssv1592090 1 6039758 6112802 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871032 "" S 6533 0 1 CHD5,KCNAB2 IS39233 nsv871032 1 6039758 6112802 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv117n71 nssv1592090 S 6533 0 1 CHD5,KCNAB2 IS39233 nssv1554967 1 6039758 6119456 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871316 "" S 6533 0 1 CHD5,KCNAB2 MS21124 nsv871316 1 6039758 6119456 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv117n71 nssv1554967 S 6533 0 1 CHD5,KCNAB2 MS21124 nssv1571447 1 6063912 6116605 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870519 "" S 6533 0 1 CHD5,KCNAB2 IS32737 nsv870519 1 6063912 6116605 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv118n71 nssv1571447 S 6533 0 1 CHD5,KCNAB2 IS32737 nssv1600510 1 6063912 6119456 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871573 "" S 6533 0 1 CHD5,KCNAB2 IS41894 nsv871573 1 6063912 6119456 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv118n71 nssv1600510 S 6533 0 1 CHD5,KCNAB2 IS41894 nssv1574986 1 6063912 6124832 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871667 "" S 6533 0 1 CHD5,KCNAB2 IS33684 nsv871667 1 6063912 6124832 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv118n71 nssv1574986 S 6533 0 1 CHD5,KCNAB2 IS33684 nssv1571844 1 6063912 6135457 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871138 "" S 6533 0 1 CHD5,KCNAB2 IS32841 nsv871138 1 6063912 6135457 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv118n71 nssv1571844 S 6533 0 1 CHD5,KCNAB2 IS32841 nssv1597261 1 6063912 6167730 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871817 "" S 6533 0 1 CHD5,KCNAB2,RPL22 IS40799 nssv1529774 1 6063912 6379059 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870945 "" S 6533 0 1 ACOT7,CHD5,GPR153,HES3,ICMT,KCNAB2,RNF207,RPL22 MS10123 nssv547694 1 6071709 6156160 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470689 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations CHD5,KCNAB2 HGDP00657 nssv1543347 1 6081149 6486743 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870634 "" S 6533 0 1 ACOT7,CHD5,ESPN,GPR153,HES2,HES3,ICMT,KCNAB2,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 MS16153 nsv870634 1 6081149 6486743 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv119n71 nssv1543347 S 6533 0 1 ACOT7,CHD5,ESPN,GPR153,HES2,HES3,ICMT,KCNAB2,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 MS16153 nssv1509718 1 6083662 6119456 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871337 "" S 6533 0 1 CHD5,KCNAB2 SP54956 nssv1431963 1 6084347 6085127 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825697 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CHD5 NA18972 essv77725 1 6089305 6091890 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17786 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CHD5 NA06985 esv17786 1 6089305 6091890 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21998 essv77725 S 451 1 0 CHD5 NA06985 nssv1584762 1 6098076 6135457 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870818 "" S 6533 0 1 CHD5 IS37172 nssv547692 1 6106679 6156160 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470689 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations CHD5 HGDP00288 nssv1442173 1 6111938 6247065 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831425 "" S 95 0 1 ACOT7,CHD5,GPR153,HES3,ICMT,RNF207,RPL22 nssv1442185 1 6111938 6247065 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831425 "" S 95 0 1 ACOT7,CHD5,GPR153,HES3,ICMT,RNF207,RPL22 nssv1442196 1 6111938 6247065 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831425 "" S 95 0 1 ACOT7,CHD5,GPR153,HES3,ICMT,RNF207,RPL22 nssv1417552 1 6112802 6135457 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818555 "" S 112 0 1 Samples from several populations that are part of the HapMap project. CHD5 NA18971 nssv7151 1 6113852 6158730 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv854 "" S 9 0 1 Samples from several populations that are part of the HapMap project. CHD5 NA12156 nssv547691 1 6116605 6156160 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470689 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations CHD5 HGDP01397 nssv547693 1 6119456 6156160 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470689 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations CHD5 HGDP00323 nssv1585780 1 6119456 6494762 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871215 "" S 6533 0 1 ACOT7,CHD5,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS37646 nsv871215 1 6119456 6494762 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv119n71 nssv1585780 S 6533 0 1 ACOT7,CHD5,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS37646 nssv1572613 1 6124832 6167730 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871123 "" S 6533 0 1 CHD5,RPL22 IS33162 nssv1589064 1 6124832 6167730 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871123 "" S 6533 0 1 CHD5,RPL22 IS38293 nssv1573521 1 6168958 6289806 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871597 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS33455 nsv871597 1 6168958 6289806 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv120n71 nssv1573521 S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS33455 nssv1573732 1 6168958 6296061 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871491 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS33504 nsv871491 1 6168958 6296061 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv120n71 nssv1573732 S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS33504 nssv1588171 1 6168958 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870643 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS38176 nsv870643 1 6168958 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv119n71 nssv1588171 S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS38176 nssv1532360 1 6175030 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871342 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 MS10769 nssv1584763 1 6175030 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871342 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS37172 nsv871342 1 6175030 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv121n71 nssv1584763,nssv1532360 M 6533 0 2 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS37172,MS10769 nssv1592091 1 6175030 6490974 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871265 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS39233 nsv871265 1 6175030 6490974 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv119n71 nssv1592091 S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS39233 nssv1549601 1 6175030 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870777 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 MS18276 nsv870777 1 6175030 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv119n71 nssv1549601 S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 MS18276 nssv1565137 1 6180734 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871654 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS30369 nssv1573043 1 6180734 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871654 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS33239 nsv871654 1 6180734 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv121n71 nssv1573043,nssv1565137 M 6533 0 2 ACOT7,GPR153,HES3,ICMT,RNF207,RPL22 IS30369,IS33239 nssv1576250 1 6180734 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871174 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS34005 nsv871174 1 6180734 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv119n71 nssv1576250 S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS34005 nssv1571845 1 6180734 6494762 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871659 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS32841 nsv871659 1 6180734 6494762 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv119n71 nssv1571845 S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 IS32841 nssv1530410 1 6180734 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870602 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 MS10311 nsv870602 1 6180734 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv119n71 nssv1530410 S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,RNF207,RPL22,TNFRSF25 MS10311 nssv1576669 1 6186997 6289806 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870577 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207 IS34235 nsv870577 1 6186997 6289806 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv120n71 nssv1576669 S 6533 0 1 ACOT7,GPR153,HES3,ICMT,RNF207 IS34235 nssv1440794 1 6203268 6246950 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825808 "" S 31 1 0 Samples from several populations that are part of the HapMap project. ACOT7,GPR153,HES3,ICMT,RNF207 NA18969 nsv825808 1 6203268 6246950 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv8n67 nssv1440794 S 31 1 0 ACOT7,GPR153,HES3,ICMT,RNF207 NA18969 nssv623771 1 6203922 6269196 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508825 "" S 4 1 0 Samples from several populations that are part of the HapMap project. ACOT7,GPR153,HES3,ICMT,RNF207 NA18994 nssv1426368 1 6214152 6246950 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv825919 "" S 31 1 0 ACOT7,GPR153,HES3,ICMT AK6 nsv825919 1 6214152 6246950 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv8n67 nssv1426368 S 31 1 0 ACOT7,GPR153,HES3,ICMT AK6 nssv1557673 1 6214397 6310371 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871569 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT MS22798 nssv1574987 1 6214397 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871073 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,TNFRSF25 IS33684 nsv871073 1 6214397 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv122n71 nssv1574987 S 6533 0 1 ACOT7,ESPN,GPR153,HES2,HES3,ICMT,MIR4252,PLEKHG5,TNFRSF25 IS33684 nssv1509719 1 6214657 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871369 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT SP54956 nsv871369 1 6214657 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv123n71 nssv1509719 S 6533 0 1 ACOT7,GPR153,HES3,ICMT SP54956 nssv1507945 1 6215979 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870672 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT SP54657 nsv870672 1 6215979 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv123n71 nssv1507945 S 6533 0 1 ACOT7,GPR153,HES3,ICMT SP54657 nssv1511725 1 6216477 6234603 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871385 "" S 6533 0 1 GPR153,HES3,ICMT SP55056 nssv1501405 1 6216477 6246918 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871272 "" S 6533 0 1 GPR153,HES3,ICMT SP51109 nssv1507606 1 6216477 6246918 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871272 "" S 6533 0 1 GPR153,HES3,ICMT SP54593 nsv871272 1 6216477 6246918 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv123n71 nssv1507606,nssv1501405 M 6533 0 2 GPR153,HES3,ICMT SP51109,SP54593 nssv1507846 1 6216477 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870972 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT SP54725 nssv1510637 1 6216477 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870972 "" S 6533 0 1 ACOT7,GPR153,HES3,ICMT SP54988 nsv870972 1 6216477 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv123n71 nssv1510637,nssv1507846 M 6533 0 2 ACOT7,GPR153,HES3,ICMT SP54725,SP54988 nssv1510490 1 6218825 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871090 "" S 6533 0 1 ACOT7,GPR153,HES3 SP54967 nsv871090 1 6218825 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv123n71 nssv1510490 S 6533 0 1 ACOT7,GPR153,HES3 SP54967 nssv1511166 1 6220460 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871616 "" S 6533 0 1 ACOT7,GPR153,HES3 SP55019 nsv871616 1 6220460 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv123n71 nssv1511166 S 6533 0 1 ACOT7,GPR153,HES3 SP55019 nssv1572614 1 6227499 6384117 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871646 "" S 6533 0 1 ACOT7,GPR153,HES3 IS33162 nssv1505915 1 6227640 6246918 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871571 "" S 6533 0 1 GPR153,HES3 SP54043 nsv871571 1 6227640 6246918 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv124n71 nssv1505915 S 6533 0 1 GPR153,HES3 SP54043 nssv1506331 1 6227640 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871266 "" S 6533 0 1 ACOT7,GPR153,HES3 SP54225 nssv702667 1 6229842 6289806 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv526371 "" S 2026 0 1 ACOT7,GPR153 nssv1537046 1 6229842 6482950 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871195 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,MIR4252,PLEKHG5,TNFRSF25 MS13095 nssv1538564 1 6229842 6482950 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871195 "" S 6533 0 1 ACOT7,ESPN,GPR153,HES2,MIR4252,PLEKHG5,TNFRSF25 MS13770 nsv871195 1 6229842 6482950 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv122n71 nssv1538564,nssv1537046 M 6533 0 2 ACOT7,ESPN,GPR153,HES2,MIR4252,PLEKHG5,TNFRSF25 MS13095,MS13770 nssv1506284 1 6231157 6247685 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871034 "" S 6533 0 1 ACOT7,GPR153 SP54173 nsv871034 1 6231157 6247685 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv124n71 nssv1506284 S 6533 0 1 ACOT7,GPR153 SP54173 nssv1509309 1 6231157 6273763 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871324 "" S 6533 0 1 ACOT7,GPR153 SP54782 nssv1518105 1 6234603 6246918 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871592 "" S 6533 0 1 GPR153 SP57469 nssv7223 1 6235767 6280469 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv965 "" S 9 0 1 Samples from several populations that are part of the HapMap project. ACOT7,GPR153 NA12156 nssv1505815 1 6238119 6252602 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871117 "" S 6533 0 1 ACOT7,GPR153 SP53990 nssv696748 1 6245523 6252602 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv519253 "" S 2026 0 1 ACOT7 nssv1570672 1 6245523 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870891 "" S 6533 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 IS32322 nsv870891 1 6245523 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv122n71 nssv1570672 S 6533 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 IS32322 essv65936 1 6288906 6291480 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18277 "" S 451 0 1 Samples from several populations that are part of the HapMap project. ACOT7 NA19240 esv18277 1 6288906 6291480 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv24092 essv65936 S 451 0 1 ACOT7 NA19240 nssv694782 1 6289806 6379059 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv522013 "" S 2026 0 1 ACOT7 nssv698142 1 6302194 6310371 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521525 "" S 2026 0 1 ACOT7 nssv2226 1 6307937 6352169 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1076 "" S 9 0 1 Samples from several populations that are part of the HapMap project. ACOT7 NA18555 nssv1580805 1 6325607 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871801 "" S 6533 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 IS35484 nsv871801 1 6325607 6472963 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv125n71 nssv1580805 S 6533 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 IS35484 nssv699845 1 6333801 6379059 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv523989 "" S 2026 0 1 ACOT7 nssv1596027 1 6333801 6486743 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870578 "" S 6533 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 IS40396 nsv870578 1 6333801 6486743 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv125n71 nssv1596027 S 6533 0 1 ACOT7,ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 IS40396 essv69102 1 6360781 6368422 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12785 "" S 451 0 1 Samples from several populations that are part of the HapMap project. ACOT7 NA12044 esv12785 1 6360781 6368422 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21684 essv69102 S 451 0 1 ACOT7 NA12044 nssv537990 1 6379059 6494762 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv461616 "" S 1557 0 1 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 1780862021_A nsv461616 1 6379059 6494762 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv2n27 nssv537990 S 1557 0 1 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 1780862021_A essv49497 1 6381440 6382138 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11459 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18517 essv60302 1 6381440 6382138 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11459 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18523 esv11459 1 6381440 6382138 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv29840 essv49497,essv60302 M 451 0 2 "" NA18517,NA18523 nssv538085 1 6384117 6486743 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv461728 "" S 1557 0 1 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 NINDS_66 nsv461728 1 6384117 6486743 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv2n27 nssv538085 S 1557 0 1 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 NINDS_66 nssv619766 1 6389543 6483676 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508836 "" S 4 1 0 Samples from several populations that are part of the HapMap project. ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 NA10860 nssv538182 1 6395881 6486743 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv461839 "" S 1557 0 1 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 NINDS_98 nsv461839 1 6395881 6486743 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv2n27 nssv538182 S 1557 0 1 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 NINDS_98 essv71508 1 6399215 6437393 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14500 "" S 451 1 0 Samples from several populations that are part of the HapMap project. ESPN,HES2,MIR4252 NA18916 esv14500 1 6399215 6444103 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25412 essv71508,essv33694,essv45035 M 451 1 2 ESPN,HES2,MIR4252,TNFRSF25 NA12489,NA18916,NA19147 nssv1505916 1 6399775 6409618 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871453 "" S 6533 0 1 ESPN,HES2 SP54043 nssv1510638 1 6399775 6486743 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871719 "" S 6533 0 1 ESPN,HES2,MIR4252,PLEKHG5,TNFRSF25 SP54988 nssv11789 1 6400615 6514591 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7880 "" S 31 0 1 Samples from several populations that are part of the HapMap project. ESPN,HES2,MIR4252,NOL9,PLEKHG5,TNFRSF25 NA19173 nssv24605 1 6400615 6514591 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7880 "" S 31 0 1 Samples from several populations that are part of the HapMap project. ESPN,HES2,MIR4252,NOL9,PLEKHG5,TNFRSF25 NA18517 nssv21438 1 6400615 6594561 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7880 "" S 31 1 0 Samples from several populations that are part of the HapMap project. ESPN,HES2,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 NA18564 nssv538257 1 6404503 6490974 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv461950 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ESPN,MIR4252,PLEKHG5,TNFRSF25 HGDP00814 nsv461950 1 6404503 6490974 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv2n27 nssv538257 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ESPN,MIR4252,PLEKHG5,TNFRSF25 HGDP00814 nssv558540 1 6407435 6443590 CNV Gain Schuster et al 2010 20164927 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer nsv482179 "" S 1 1 0 ESPN,MIR4252 KB1 essv33694 1 6410334 6444103 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14500 "" S 451 0 1 Samples from several populations that are part of the HapMap project. ESPN,MIR4252,TNFRSF25 NA19147 nssv1442207 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442218 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442229 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442240 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442251 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442262 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442273 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442284 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442296 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442307 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442318 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442329 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442340 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442351 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442362 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1442373 1 6411973 6587990 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831536 "" S 95 0 1 ESPN,KLHL21,MIR4252,NOL9,PLEKHG5,TAS1R1,TNFRSF25,ZBTB48 nssv1440112 1 6412513 6443867 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826030 "" S 31 1 0 Samples from several populations that are part of the HapMap project. ESPN,MIR4252,TNFRSF25 NA18564 nsv826030 1 6412513 6443867 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv9n67 nssv1440112 S 31 1 0 ESPN,MIR4252,TNFRSF25 NA18564 nssv1440795 1 6412513 6447077 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826142 "" S 31 1 0 Samples from several populations that are part of the HapMap project. ESPN,MIR4252,TNFRSF25 NA18969 nsv826142 1 6412513 6447077 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv9n67 nssv1440795 S 31 1 0 ESPN,MIR4252,TNFRSF25 NA18969 essv45035 1 6414372 6439653 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14500 "" S 451 0 1 Samples from several populations that are part of the HapMap project. ESPN NA12489 nssv547695 1 6416986 6494762 CNV Gain Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470690 "" S 443 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ESPN,PLEKHG5,TNFRSF25 HGDP00553 nssv1508766 1 6421441 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870465 "" S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP54672 nssv1509017 1 6421441 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870465 "" S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP54725 nssv1505917 1 6421441 6486743 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870746 "" S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP54043 nsv870746 1 6421441 6486743 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv126n71 nssv1505917 S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP54043 nssv1544218 1 6421441 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871254 "" S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 MS16315 nsv871254 1 6421441 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv126n71 nssv1544218 S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 MS16315 nssv1509720 1 6426211 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870922 "" S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP54956 nsv870922 1 6426211 6500352 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv126n71 nssv1509720 S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP54956 nssv1511167 1 6432145 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870902 "" S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP55019 nsv870902 1 6432145 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv127n71 nssv1511167 S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP55019 nssv1511307 1 6432145 6464917 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870790 "" S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP55021 nsv870790 1 6432145 6464917 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv127n71 nssv1511307 S 6533 0 1 ESPN,PLEKHG5,TNFRSF25 SP55021 nssv547696 1 6442898 6500352 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470691 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations ESPN,PLEKHG5,TNFRSF25 HGDP00978 nssv1507758 1 6444795 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871841 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP54593 nssv1507774 1 6444795 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871841 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP54591 nsv871841 1 6444795 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv128n71 nssv1507774,nssv1507758 M 6533 0 2 PLEKHG5,TNFRSF25 SP54591,SP54593 nssv1519322 1 6446017 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871013 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP81010 nsv871013 1 6446017 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv128n71 nssv1519322 S 6533 0 1 PLEKHG5,TNFRSF25 SP81010 nssv1509016 1 6446017 6464917 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870716 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP54684 nssv538332 1 6446017 6503483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv462061 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PLEKHG5,TNFRSF25 HGDP00614 nssv1507629 1 6446412 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871413 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP54657 nssv1510491 1 6446412 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871413 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP54967 nsv871413 1 6446412 6455722 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv128n71 nssv1510491,nssv1507629 M 6533 0 2 PLEKHG5,TNFRSF25 SP54657,SP54967 nssv1509066 1 6446412 6457368 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871111 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP54750 nsv871111 1 6446412 6457368 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv128n71 nssv1509066 S 6533 0 1 PLEKHG5,TNFRSF25 SP54750 nssv1509648 1 6447088 6457368 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870707 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP54937 nssv1514264 1 6447088 6457368 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870707 "" S 6533 0 1 PLEKHG5,TNFRSF25 SP55992 nsv870707 1 6447088 6457368 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv128n71 nssv1509648,nssv1514264 M 6533 0 2 PLEKHG5,TNFRSF25 SP54937,SP55992 nssv3152 1 6470431 6490052 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1187 "" S 9 1 0 Samples from several populations that are part of the HapMap project. PLEKHG5 NA12878 nssv1442384 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442395 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442407 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442418 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442429 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442440 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442451 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442462 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442473 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442484 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442495 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442506 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442518 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442529 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 nssv1442540 1 6508456 6570177 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831647 "" S 95 0 1 NOL9,TAS1R1,ZBTB48 essv4064753 1 6541559 6541559 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1249079 "" S 2 1 0 TAS1R1 HuRef essv2395903 1 6543027 6553006 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259781 "" S 144 0 0 Samples from several populations that are part of the HapMap project. TAS1R1 NA18945 essv2396471 1 6543027 6553006 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259781 "" S 144 0 0 Samples from several populations that are part of the HapMap project. TAS1R1 NA18517 essv2398444 1 6543027 6553006 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259781 "" S 144 0 0 Samples from several populations that are part of the HapMap project. TAS1R1 NA18871 nssv1549602 1 6546086 6624738 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871768 "" S 6533 0 1 DNAJC11,KLHL21,PHF13,TAS1R1,THAP3,ZBTB48 MS18276 nsv871768 1 6546086 6624738 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv129n71 nssv1549602 S 6533 0 1 DNAJC11,KLHL21,PHF13,TAS1R1,THAP3,ZBTB48 MS18276 nssv1546439 1 6562434 6643577 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871069 "" S 6533 0 1 DNAJC11,KLHL21,PHF13,THAP3,ZBTB48 MS17208 nsv871069 1 6562434 6643577 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv129n71 nssv1546439 S 6533 0 1 DNAJC11,KLHL21,PHF13,THAP3,ZBTB48 MS17208 nssv1558402 1 6562434 7032921 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871348 "" S 6533 1 0 CAMTA1,DNAJC11,KLHL21,PHF13,THAP3,ZBTB48 MS23257 nssv1499683 1 6565251 6575926 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870646 "" S 6533 0 1 KLHL21,ZBTB48 SP50159 nssv1507862 1 6579827 6602435 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871742 "" S 6533 0 1 KLHL21,PHF13 SP54725 nssv1511308 1 6579827 6602435 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871742 "" S 6533 0 1 KLHL21,PHF13 SP55021 nsv871742 1 6579827 6602435 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv130n71 nssv1511308,nssv1507862 M 6533 0 2 KLHL21,PHF13 SP54725,SP55021 nssv1505918 1 6582101 6610945 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871056 "" S 6533 0 1 KLHL21,PHF13,THAP3 SP54043 nsv871056 1 6582101 6610945 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv130n71 nssv1505918 S 6533 0 1 KLHL21,PHF13,THAP3 SP54043 nssv1426369 1 6582832 6611290 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826253 "" S 31 1 0 KLHL21,PHF13,THAP3 AK6 nssv467080 1 6624738 6726334 CNV Loss Conrad et al 2006 16327808 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv437199 "" S 60 0 1 Samples from several populations that are part of the HapMap project. DNAJC11 NA19205 essv5234545 1 6651194 6652460 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2640779 "" S 1 0 1 DNAJC11 NA18507 essv4834781 1 6651805 6652374 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2237641 "" S 1 0 1 Samples from several populations that are part of the HapMap project. DNAJC11 NA18507 nssv4861 1 6660795 6681039 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1298 "" S 9 1 0 Samples from several populations that are part of the HapMap project. DNAJC11 NA19129 nssv701050 1 6679021 6683848 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv525013 "" S 2026 0 1 DNAJC11 essv43253 1 6685213 6686083 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv18257 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18909 esv18257 1 6685213 6686083 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28409 essv43253 S 451 0 1 "" NA18909 essv73045 1 6710103 6715982 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14015 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA19225 esv14015 1 6710103 6715982 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28362 essv73045 S 451 1 0 "" NA19225 nssv625337 1 6725094 6725389 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512713 "" S 1 1 0 "" 1 essv3709090 1 6725208 6725208 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1464790 "" S 2 1 0 "" HuRef essv4873252 1 6781129 6781558 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1979443 "" S 1 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18507 essv3780745 1 6781239 6781418 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1086035 "" S 2 0 1 CAMTA1 HuRef essv3581910 1 6781243 6781419 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv999225 "" S 3 0 1 CAMTA1 HuRef essv43903 1 6783932 6784505 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv20468 "" S 451 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18909 esv20468 1 6783932 6784505 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25521 essv43903 S 451 0 1 CAMTA1 NA18909 nssv1586580 1 6809236 6894980 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871178 "" S 6533 0 1 CAMTA1 IS37874 essv5345164 1 6923003 6923833 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2556451 "" S 1 1 0 CAMTA1 NA18507 nssv625338 1 6923530 6923586 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512714 "" S 1 1 0 CAMTA1 1 essv4106152 1 6923582 6923582 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1590628 "" S 2 1 0 CAMTA1 HuRef essv50116 1 6945255 6946006 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12322 "" S 451 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18517 esv12322 1 6945255 6946116 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28688 essv44891,essv50116 M 451 0 2 CAMTA1 NA12489,NA18517 essv44891 1 6945551 6946116 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12322 "" S 451 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA12489 essv5354983 1 6966217 6967286 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2482000 "" S 1 1 0 CAMTA1 NA18507 essv3566621 1 7000790 7000790 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv988826 "" S 3 1 0 CAMTA1 HuRef nssv696693 1 7012803 7022247 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv519205 "" S 2026 0 1 CAMTA1 essv3563883 1 7069978 7082370 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv990496 "" S 3 0 1 CAMTA1 HuRef essv5208770 1 7086693 7086841 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2444029 "" S 1 0 1 CAMTA1 NA18507 essv4044198 1 7097432 7097873 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1124399 "" S 2 0 1 CAMTA1 HuRef nssv538567 1 7108912 7154071 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv462394 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations CAMTA1 HGDP00797 nssv1558403 1 7179530 7249208 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871273 "" S 6533 1 0 CAMTA1 MS23257 essv2586154 1 7247055 7247995 CNV Loss Banerjee et al 2011 21479260 SNP_array Affymetrix SNP 6.0 esv275496 "" S 1250 0 1 CAMTA1 nssv1411 1 7338213 7362575 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1410 "" S 9 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19240 nssv1530411 1 7386962 7590933 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871464 "" S 6533 0 1 CAMTA1 MS10311 nssv703764 1 7405633 7408904 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527338 "" S 2026 0 1 CAMTA1 essv2580355 1 7408744 7408958 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv274189 "" S 7 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA12891 essv2520936 1 7408811 7409078 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv269095 "" S 157 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18498 essv2529481 1 7408811 7409078 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv269095 "" S 157 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19093 essv2530281 1 7408811 7409078 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv269095 "" S 157 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19141 essv2538855 1 7408811 7409078 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv269095 "" S 157 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19108 essv2556155 1 7408811 7409078 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv269095 "" S 157 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18871 essv2569345 1 7408811 7409078 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv269095 "" S 157 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18508 essv2571096 1 7408811 7409078 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv269095 "" S 157 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19238 nssv1442551 1 7413944 7594260 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831758 "" S 95 1 0 CAMTA1 nssv1442562 1 7413944 7594260 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831758 "" S 95 0 1 CAMTA1 nssv1442573 1 7413944 7594260 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831758 "" S 95 0 1 CAMTA1 nssv1442584 1 7413944 7594260 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831758 "" S 95 0 1 CAMTA1 nssv1543348 1 7415578 7448569 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871310 "" S 6533 0 1 CAMTA1 MS16153 nssv1558404 1 7427324 7449895 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871370 "" S 6533 1 0 CAMTA1 MS23257 nssv705976 1 7430229 7441851 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv522589 "" S 2026 0 1 CAMTA1 nssv696361 1 7435612 7441285 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv518903 "" S 2026 0 1 CAMTA1 nssv1546440 1 7435612 7498253 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870872 "" S 6533 0 1 CAMTA1 MS17208 nssv703134 1 7469799 7472075 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv526782 "" S 2026 0 1 CAMTA1 essv5309036 1 7475559 7475822 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2647714 "" S 1 0 1 CAMTA1 NA18507 essv4549214 1 7475977 7476287 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1935214 "" S 1 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18507 nssv704056 1 7479739 7489999 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527595 "" S 2026 0 1 CAMTA1 nssv1421439 1 7489022 7490019 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826364 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18997 nssv26894 1 7491072 7494340 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv7991 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18860 essv35948 1 7491802 7494052 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18907 essv33020 1 7491802 7494102 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19147 essv79623 1 7491802 7494102 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA12749 esv12117 1 7491802 7494108 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28432 essv47411,essv78242,essv35948,essv43325,essv71129,essv55223,essv58071,essv81734,essv51190,essv33020,essv83364,essv72605,essv74521,essv65807,essv38793,essv52383,essv74139,essv39096,essv75948,essv44968,essv79623,essv66549,essv63297,essv41815,essv54200,essv76994,essv50002,essv59985,essv67734 M 451 28 1 CAMTA1 NA06985,NA11931,NA12004,NA12006,NA12156,NA12287,NA12414,NA12489,NA12749,NA12828,NA15510,NA18505,NA18508,NA18511,NA18517,NA18523,NA18858,NA18861,NA18907,NA18909,NA18916,NA19099,NA19108,NA19114,NA19147,NA19190,NA19225,NA19240,NA19257 nssv1420846 1 7491802 7494188 CNV Deletion Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv820592 "" S 1 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA10851 nssv1421440 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18997 nssv1422357 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18552 nssv1423943 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18582 nssv1424725 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 CAMTA1 AK2 nssv1425484 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 CAMTA1 AK4 nssv1426370 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 CAMTA1 AK6 nssv1427245 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 CAMTA1 AK8 nssv1428015 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 CAMTA1 AK10 nssv1430329 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 CAMTA1 AK16 nssv1431057 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 CAMTA1 AK18 nssv1431790 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 CAMTA1 AK20 nssv1438581 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18973 nssv1440113 1 7491802 7494188 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826475 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18564 essv81734 1 7491873 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19114 essv43325 1 7491948 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18909 essv65807 1 7491948 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19240 essv54200 1 7492171 7494102 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18508 essv38793 1 7492171 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19257 essv58071 1 7492171 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19108 essv76994 1 7492171 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18511 essv5286155 1 7492204 7494913 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2592830 "" S 1 0 1 CAMTA1 NA18507 nssv1419290 1 7492405 7494002 CNV Loss Kim_et_al_2009 19587683 Oligo_aCGH,Sequencing,SNP_array Agilent Custom 24M CGH Array nsv819302 "" S 2 0 1 CAMTA1 AK1 essv47411 1 7492417 7494102 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18861 essv67734 1 7492417 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18858 essv4836092 1 7492498 7494279 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2190574 "" S 1 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18507 essv72605 1 7492502 7494188 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19225 essv41815 1 7492607 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18505 essv26356 1 7492621 7494271 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv3915 "" S 1 0 1 Single Asian sample YH CAMTA1 YH essv29674 1 7492661 7494110 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv7233 "" S 1 0 1 CAMTA1 SJK essv52383 1 7492722 7493908 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA12006 essv55223 1 7492722 7493943 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19099 essv51190 1 7492722 7494052 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA11931 essv59985 1 7492722 7494052 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18523 essv63297 1 7492722 7494052 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 CAMTA1 NA15510 essv71129 1 7492722 7494052 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18916 essv74139 1 7492722 7494052 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA12156 essv75948 1 7492722 7494052 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA12414 essv44968 1 7492722 7494102 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA12489 essv66549 1 7492722 7494102 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA12828 essv39096 1 7492722 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA12287 essv74521 1 7492722 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA12004 essv78242 1 7492722 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA06985 essv83364 1 7492722 7494108 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19190 essv50002 1 7492777 7494102 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12117 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18517 nssv1440797 1 7492810 7493979 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826586 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18969 nsv826586 1 7492810 7493979 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv10n67 nssv1440797 S 31 1 0 CAMTA1 NA18969 nssv1423352 1 7493044 7493979 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826697 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18968 nsv826697 1 7493044 7493979 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv10n67 nssv1423352 S 31 1 0 CAMTA1 NA18968 nssv1436326 1 7493150 7493730 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826808 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA18542 essv12439 1 7494050 7610646 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv15e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA19152 esv1390 1 7494050 7610646 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv15e1 "" S 271 CAMTA1 essv70915 1 7500245 7502465 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15537 "" S 451 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18916 esv15537 1 7500245 7502465 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23816 essv70915 S 451 0 1 CAMTA1 NA18916 nssv625339 1 7502743 7503046 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512715 "" S 1 1 0 CAMTA1 1 nssv1529775 1 7507401 7547442 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870745 "" S 6533 0 1 CAMTA1 MS10123 essv3579404 1 7531319 7531545 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv993163 "" S 3 0 1 CAMTA1 HuRef essv3860626 1 7531327 7531554 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1611358 "" S 2 0 1 CAMTA1 HuRef nssv697212 1 7560566 7567389 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520077 "" S 2026 0 1 CAMTA1 nssv1546441 1 7608781 7671112 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871278 "" S 6533 0 1 CAMTA1 MS17208 nssv1592092 1 7608781 7671112 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871278 "" S 6533 0 1 CAMTA1 IS39233 essv4674847 1 7637619 7637973 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1977744 "" S 1 0 1 Samples from several populations that are part of the HapMap project. CAMTA1 NA18507 essv30546 1 7637637 7637872 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv8105 "" S 1 0 1 CAMTA1 SJK nssv1585781 1 7638363 7697922 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871889 "" S 6533 0 1 CAMTA1 IS37646 essv78003 1 7685616 7688145 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13845 "" S 451 1 0 Samples from several populations that are part of the HapMap project. CAMTA1 NA06985 esv13845 1 7685616 7688145 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28595 essv78003 S 451 1 0 CAMTA1 NA06985 nssv1555730 1 7768282 7833686 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870846 "" S 6533 0 1 PER3,UTS2 MS21528 nssv179611 1 7778984 7787527 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv161033 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans PER3 essv3570335 1 7812574 7812627 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv991458 "" S 3 0 1 PER3 HuRef essv3804508 1 7845636 7845696 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1585189 "" S 2 0 1 "" HuRef essv27487 1 7847521 7848259 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv5046 "" S 1 0 1 Single Asian sample YH "" YH nssv179299 1 7847524 7847971 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160721 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans "" essv33764 1 7847539 7848144 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10705 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18502 essv67727 1 7847539 7848144 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10705 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18858 essv75251 1 7847539 7848144 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10705 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12004 essv79796 1 7847539 7848144 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10705 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12749 esv10705 1 7847539 7848144 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv29691 essv75251,essv79796,essv33764,essv67727 M 451 0 4 "" NA12004,NA12749,NA18502,NA18858 nssv1420957 1 7847539 7848144 CNV Deletion Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv821110 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA10851 essv31536 1 7847542 7848172 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv9095 "" S 1 0 1 "" SJK essv2398355 1 7895683 7896229 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259866 "" S 144 0 0 Samples from several populations that are part of the HapMap project. "" NA19093 nssv1558405 1 7895757 8166732 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871360 "" S 6533 1 0 ERRFI1,PARK7,TNFRSF9 MS23257 nssv2406 1 7936826 7970080 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1521 "" S 9 1 0 Samples from several populations that are part of the HapMap project. PARK7 NA18555 essv4650492 1 7972997 7973356 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2403277 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv29237 1 8009540 8009603 CNV Gain Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv6796 "" S 1 1 0 "" SJK nssv704677 1 8067881 8069744 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv528132 "" S 2026 0 1 "" essv58411 1 8105031 8112909 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14504 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19108 esv14504 1 8105031 8113962 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25059 essv64650,essv58411 M 451 0 2 "" NA07045,NA19108 essv5003208 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19373 essv5005423 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19664 essv5009796 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19318 essv5012227 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19035 essv5014120 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19321 essv5015810 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA20288 essv5016176 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19215 essv5019834 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19915 essv5021464 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19702 essv5022164 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19352 essv5022989 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19109 essv5028046 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19154 essv5031289 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA20363 essv5037691 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19107 essv5038470 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19471 essv5053091 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA18933 essv5053733 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA20347 essv5060745 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19204 essv5071617 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19403 essv5073414 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA20297 essv5075870 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19701 essv5078502 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19374 essv5080397 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA20343 essv5088579 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19153 essv5107816 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA21424 essv5113994 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19127 essv5114664 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19704 essv5115860 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19108 essv5120024 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19472 essv5120988 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19313 essv5132727 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19437 essv5141409 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19213 essv5142796 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA19207 essv5142988 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA21596 essv5143136 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA21580 essv5146224 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA21295 essv5147348 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA21317 essv5154659 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA07045 essv5159857 1 8105049 8112441 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421513 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. "" NA06997 essv64650 1 8106949 8113962 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14504 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA07045 nssv1442595 1 8125994 8276744 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831870 "" S 95 0 1 "" nssv1442606 1 8125994 8276744 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831870 "" S 95 0 1 "" nssv1442617 1 8125994 8276744 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831870 "" S 95 0 1 "" nssv1442630 1 8125994 8276744 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831870 "" S 95 0 1 "" nssv1442641 1 8125994 8276744 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831870 "" S 95 0 1 "" nssv1442652 1 8125994 8276744 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831870 "" S 95 0 1 "" essv51446 1 8126671 8133439 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10444 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA11931 essv62020 1 8126671 8133684 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10444 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12239 esv10444 1 8126671 8133714 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv22301 essv51446,essv74612,essv62020 M 451 3 0 "" NA11931,NA12004,NA12239 essv74612 1 8126770 8133714 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10444 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12004 essv73724 1 8139415 8163405 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15760 "" S 451 1 0 Samples from several populations that are part of the HapMap project. "" NA12156 esv15760 1 8139415 8163405 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23800 essv73724 S 451 1 0 "" NA12156 nssv7290 1 8160996 8206161 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1632 "" S 9 0 1 Samples from several populations that are part of the HapMap project. "" NA12156 essv3685454 1 8259524 8259524 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1547514 "" S 2 1 0 "" HuRef nssv1530412 1 8295795 8359389 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871164 "" S 6533 0 1 RERE,SLC45A1 MS10311 nssv3033 1 8300340 8334303 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1743 "" S 9 1 0 Samples from several populations that are part of the HapMap project. SLC45A1 NA18555 nssv625340 1 8304272 8305144 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512716 "" S 1 1 0 "" 1 essv5225689 1 8304404 8305201 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2601359 "" S 1 1 0 "" NA18507 nssv657128 1 8313475 8318147 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 SLC45A1 nssv671511 1 8313475 8318147 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 SLC45A1 nssv685632 1 8313475 8318147 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 SLC45A1 nssv693424 1 8313475 8318147 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 SLC45A1 nssv679037 1 8313475 8321780 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 SLC45A1 nssv654276 1 8313475 8332259 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 SLC45A1 nssv656941 1 8313475 8332259 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 SLC45A1 nssv684816 1 8313475 8346097 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 RERE,SLC45A1 nssv693483 1 8313475 8346097 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516827 "" S 2026 0 1 RERE,SLC45A1 essv4006791 1 8314094 8314094 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1250756 "" S 2 1 0 SLC45A1 HuRef essv5304328 1 8326992 8327926 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2624373 "" S 1 1 0 "" NA18507 essv4276612 1 8327542 8327542 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1162151 "" S 2 1 0 "" HuRef nssv1419699 1 8338735 8344018 CNV Gain Kim_et_al_2009 19587683 Oligo_aCGH,Sequencing,SNP_array Agilent Custom 24M CGH Array nsv819494 "" S 2 1 0 RERE AK1 essv3583268 1 8358166 8358166 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv990980 "" S 3 1 0 RERE HuRef essv2580011 1 8369188 8369431 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv273761 "" S 7 1 0 Samples from several populations that are part of the HapMap project. RERE NA12892 essv2580120 1 8369188 8369431 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv273761 "" S 7 1 0 Samples from several populations that are part of the HapMap project. RERE NA12878 essv2580327 1 8369188 8369431 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv273761 "" S 7 1 0 Samples from several populations that are part of the HapMap project. RERE NA12891 essv2519703 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18566 essv2520382 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12716 essv2521100 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11894 essv2521655 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12144 essv2522133 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18571 essv2522407 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18960 essv2522919 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11931 essv2523502 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18537 essv2524052 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19129 essv2524665 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18555 essv2525155 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA07357 essv2525399 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12156 essv2526156 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11918 essv2526576 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19114 essv2527007 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19005 essv2527484 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18952 essv2528159 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18907 essv2528914 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18579 essv2530134 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18949 essv2530273 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19141 essv2531190 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18573 essv2531483 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18961 essv2531804 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12006 essv2532047 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18505 essv2532915 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18576 essv2533079 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA07051 essv2533443 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18944 essv2533916 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18916 essv2534254 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18959 essv2534818 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18561 essv2535079 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12249 essv2535758 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18608 essv2536145 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA06986 essv2536780 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11920 essv2538134 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA07000 essv2538216 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18547 essv2538711 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19108 essv2539619 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18563 essv2540499 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18552 essv2540935 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11831 essv2541339 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18545 essv2541643 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18592 essv2542233 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11919 essv2542755 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18550 essv2543245 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18965 essv2543852 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11992 essv2544263 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12414 essv2544714 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18526 essv2545712 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19239 essv2546789 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12892 essv2547550 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12717 essv2548777 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA07037 essv2549548 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18564 essv2550751 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12155 essv2551034 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18858 essv2551882 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18504 essv2552139 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12489 essv2552441 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18502 essv2553211 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18605 essv2553993 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12287 essv2554940 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12872 essv2555233 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18943 essv2555488 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18945 essv2555796 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18956 essv2556244 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18871 essv2556615 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11994 essv2558165 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA10851 essv2558314 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12750 essv2559401 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18638 essv2559488 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12776 essv2560042 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18570 essv2561114 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18562 essv2561751 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12874 essv2562817 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18532 essv2563419 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA10847 essv2563632 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18603 essv2564173 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12828 essv2565105 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18558 essv2565498 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12812 essv2565689 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11829 essv2566227 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18572 essv2567034 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18947 essv2567633 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18582 essv2567950 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18577 essv2570173 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18593 essv2570907 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11993 essv2571113 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19238 essv2571869 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18973 essv2572262 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18609 essv2572725 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19143 essv2573241 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18942 essv2573625 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18964 essv2573839 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18951 essv2574134 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA19240 essv2575808 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11830 essv2576429 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12814 essv2577151 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18970 essv2577789 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12761 essv2578320 1 8369196 8369518 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX + Illumina Genome Analyzer II esv271602 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA18940 nssv700963 1 8378299 8394751 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv524946 "" S 2026 0 1 RERE essv2514425 1 8424556 8424907 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv270262 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12874 essv2516472 1 8424556 8424907 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv270262 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12814 essv2517053 1 8424556 8424907 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv270262 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11931 essv2518542 1 8424556 8424907 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv270262 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12287 essv2518736 1 8424556 8424907 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv270262 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA12045 essv2519296 1 8424556 8424907 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv270262 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11894 essv2516985 1 8450866 8450951 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv268185 "" S 157 1 0 Samples from several populations that are part of the HapMap project. RERE NA11931 essv49337 1 8473045 8473633 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13828 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18517 essv67549 1 8473045 8473785 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13828 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18858 esv13828 1 8473045 8473785 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25533 essv82871,essv49337,essv67549 M 451 0 3 RERE NA18517,NA18858,NA19190 essv82871 1 8473068 8473785 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13828 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA19190 essv45944 1 8473113 8474309 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11693 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA19129 esv11693 1 8473113 8474309 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25533 essv45944 S 451 0 1 RERE NA19129 nssv178193 1 8500203 8503822 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159615 "" M 24 RERE essv41052 1 8593502 8607977 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12878 nssv1423363 1 8593977 8596557 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv826919 "" S 31 1 0 Samples from several populations that are part of the HapMap project. RERE NA18968 essv58369 1 8594205 8607977 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA19108 esv10195 1 8594205 8608321 CNV Gain+Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26500 essv70430,essv58369,essv46463,essv57705,essv75182,essv52643,essv73403,essv61132,essv39106,essv76155,essv44197,essv41052,essv62367,essv53905,essv76599,essv49938,essv59644 M 451 1 16 RERE NA11993,NA12004,NA12006,NA12156,NA12239,NA12287,NA12414,NA12489,NA12878,NA15510,NA18508,NA18511,NA18517,NA18523,NA18916,NA19108,NA19129 essv62535 1 8594327 8596863 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15623 "" S 451 1 0 RERE NA15510 esv15623 1 8594327 8596863 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26500 essv62535,essv47988 M 451 2 0 RERE NA15510,NA18861 essv47988 1 8594387 8596863 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15623 "" S 451 1 0 Samples from several populations that are part of the HapMap project. RERE NA18861 essv73403 1 8594482 8607977 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12156 essv70430 1 8594482 8608070 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18916 essv57705 1 8594482 8608321 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA11993 essv61132 1 8595291 8607977 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12239 essv44197 1 8595357 8609761 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12489 essv49938 1 8595487 8607752 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18517 essv52643 1 8595542 8607752 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12006 essv56246 1 8595644 8605484 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17365 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12776 esv17365 1 8595644 8605484 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26500 essv37482,essv51144,essv56246,essv68294 M 451 0 4 RERE NA11894,NA11931,NA12776,NA18858 essv46463 1 8595644 8607752 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA19129 essv76599 1 8595644 8607752 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18511 essv59644 1 8595833 8607977 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18523 essv53905 1 8595897 8608087 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18508 essv32585 1 8596554 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13894 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA19147 esv13894 1 8596554 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26500 essv46756,essv35678,essv43940,essv32585,essv71896,essv66194,essv67207,essv63056 M 451 0 8 RERE NA12828,NA15510,NA18861,NA18907,NA18909,NA19147,NA19225,NA19240 essv51144 1 8596593 8604599 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17365 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA11931 essv35678 1 8596923 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13894 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18907 essv43940 1 8596923 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13894 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18909 essv46756 1 8596923 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13894 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18861 essv63056 1 8596923 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13894 "" S 451 0 1 RERE NA15510 essv66194 1 8596923 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13894 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA19240 essv67207 1 8596923 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13894 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12828 essv71896 1 8596923 8599175 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13894 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA19225 essv37482 1 8596923 8604186 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17365 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA11894 essv68294 1 8596923 8604441 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17365 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18858 essv76155 1 8596923 8607977 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12414 essv75182 1 8597066 8607752 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12004 nssv1435647 1 8597147 8607597 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827030 "" S 31 0 1 Samples from several populations that are part of the HapMap project. RERE NA18566 essv39106 1 8597427 8607752 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA12287 essv62367 1 8599267 8606950 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv10195 "" S 451 1 0 RERE NA15510 essv4792099 1 8628533 8628957 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2407042 "" S 1 0 1 Samples from several populations that are part of the HapMap project. RERE NA18507 essv46954 1 8637775 8642826 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17675 "" S 451 1 0 Samples from several populations that are part of the HapMap project. RERE NA18861 esv17675 1 8637775 8642826 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27511 essv46954,essv63342 M 451 2 0 RERE NA15510,NA18861 essv63342 1 8638296 8642347 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17675 "" S 451 1 0 RERE NA15510 nssv1423374 1 8638338 8642367 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827141 "" S 31 1 0 Samples from several populations that are part of the HapMap project. RERE NA18968 essv4771378 1 8651416 8651857 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2384996 "" S 1 0 1 Samples from several populations that are part of the HapMap project. RERE NA18507 nssv1590112 1 8661524 8761887 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871184 "" S 6533 0 1 RERE IS38463 nssv1598966 1 8661524 8813712 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871221 "" S 6533 0 1 RERE IS41113 essv53291 1 8689030 8697499 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17965 "" S 451 0 1 Samples from several populations that are part of the HapMap project. RERE NA18508 esv17965 1 8689030 8697499 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25426 essv53291 S 451 0 1 RERE NA18508 nssv1558406 1 8718138 8989282 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871694 "" S 6533 1 0 CA6,ENO1,ENO1-AS1,RERE,SLC2A7 MS23257 nssv1569056 1 8744951 8839104 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871022 "" S 6533 0 1 RERE IS31419 nssv7349 1 8748742 8782277 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1854 "" S 9 1 0 Samples from several populations that are part of the HapMap project. RERE NA12156 essv9828 1 8810828 8839227 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv16e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. "" NA18863 esv482 1 8810828 8839227 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv16e1 "" S 271 "" nssv1546442 1 8843299 8898561 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871026 "" S 6533 0 1 ENO1,ENO1-AS1 MS17208 nssv703492 1 8913728 8914460 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527110 "" S 2026 0 1 "" nssv3239 1 8926325 8930244 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv1965 "" S 9 1 0 Samples from several populations that are part of the HapMap project. CA6 NA12878 nssv660321 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv660579 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv660728 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv666175 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv669183 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv671111 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv671439 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv671923 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv692368 1 8931993 8934309 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516097 "" S 2026 0 1 CA6 nssv1515922 1 8953551 8979356 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871338 "" S 6533 0 1 CA6 SP56313 nssv702688 1 8961609 8972459 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv526389 "" S 2026 0 1 "" nssv1500211 1 8967992 8990607 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871609 "" S 6533 0 1 SLC2A7 SP50559 nssv538732 1 8981133 9003553 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv462616 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations SLC2A7 HGDP00806 nssv701151 1 8981133 9003553 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv525092 "" S 2026 1 0 SLC2A7 nssv538823 1 9002998 9055643 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv462727 "" S 1557 0 1 SLC2A5,SLC2A7 1780854205_A nssv1442663 1 9014304 9170154 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv831981 "" S 95 0 1 GPR157,MIR34A,SLC2A5 essv3665009 1 9036107 9036107 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1504235 "" S 2 1 0 SLC2A5 HuRef essv4265262 1 9036142 9036142 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1740239 "" S 2 1 0 SLC2A5 HuRef nssv625341 1 9043542 9044383 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512717 "" S 1 1 0 SLC2A5 1 essv5161558 1 9089163 9197219 CNV Duplication Simon-Sanchez_et_al_2007 17116639 qPCR,SNP_array Illumina HumanHap300 BeadChip + Infinium Human-1 Genotyping BeadChip esv2422210 "" S 181 1 0 A publicly available cohort of neurologically normal caucasian individuals aged 55 to 88 years, and collected from several sites across North America. GPR157,MIR34A ND01701 nssv1576881 1 9093465 9141308 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871145 "" S 6533 0 1 GPR157,MIR34A IS34304 essv4133256 1 9098831 9098831 CNV Insertion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1519481 "" S 2 1 0 GPR157 HuRef nssv1442674 1 9109155 9287189 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832092 "" S 95 0 1 GPR157,H6PD,MIR34A,SPSB1 nssv1509721 1 9168159 9238434 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871755 "" S 6533 0 1 H6PD SP54956 essv6984897 1 9238434 9316595 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv2750843 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) H6PD,SPSB1 SPC_192 essv6986463 1 9238434 9316595 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv2750844 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) H6PD,SPSB1 BEC_670 esv2750843 1 9238434 9316595 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array dgv2e55 essv6987707,essv6984897,essv6984898 M 771 1 0 H6PD,SPSB1 SPC_192 essv6983583 1 9238434 9327280 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array esv2750844 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) H6PD,SPSB1 BEC_670 esv2750844 1 9238434 9327280 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array dgv2e55 essv6983583,essv6986463,essv6983584 M 771 1 0 H6PD,SPSB1 BEC_670 essv79018 1 9240393 9243813 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16429 "" S 451 0 1 Samples from several populations that are part of the HapMap project. H6PD NA12749 esv16429 1 9240393 9243813 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23318 essv79018 S 451 0 1 H6PD NA12749 nssv538922 1 9240988 9310031 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv462839 "" S 1557 1 0 H6PD,SPSB1 1780854392_A nsv462839 1 9240988 9310031 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv3n27 nssv538922 S 1557 1 0 H6PD,SPSB1 1780854392_A nssv539001 1 9240988 9319247 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv462950 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations H6PD,SPSB1 HGDP00136 nssv539092 1 9240988 9319247 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv463061 "" S 1557 1 0 H6PD,SPSB1 1780854556_A nsv462950 1 9240988 9319247 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv3n27 nssv539001 S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations H6PD,SPSB1 HGDP00136 nsv463061 1 9240988 9319247 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv3n27 nssv539092 S 1557 1 0 H6PD,SPSB1 1780854556_A nssv1587493 1 9240988 9323455 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870557 "" S 6533 1 0 H6PD,SPSB1 IS38057 nsv870557 1 9240988 9323455 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv131n71 nssv1587493 S 6533 1 0 H6PD,SPSB1 IS38057 nssv1565977 1 9240988 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871423 "" S 6533 1 0 H6PD,SPSB1 IS30539 nssv1576660 1 9240988 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871423 "" S 6533 1 0 H6PD,SPSB1 IS34218 nssv1583397 1 9240988 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871423 "" S 6533 1 0 H6PD,SPSB1 IS36458 nssv1587425 1 9240988 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871423 "" S 6533 1 0 H6PD,SPSB1 IS38050 nsv871423 1 9240988 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv131n71 nssv1565977,nssv1587425,nssv1576660,nssv1583397 M 6533 4 0 H6PD,SPSB1 IS30539,IS34218,IS36458,IS38050 nssv539195 1 9240988 9334995 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv463172 "" S 1557 1 0 H6PD,SPSB1 1780862577_A nsv463172 1 9240988 9334995 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv3n27 nssv539195 S 1557 1 0 H6PD,SPSB1 1780862577_A nssv696393 1 9243828 9287221 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520191 "" S 2026 1 0 H6PD,SPSB1 nssv539963 1 9243828 9319247 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv463950 "" S 1557 1 0 H6PD,SPSB1 1780862066_A nssv662674 1 9243828 9319247 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520191 "" S 2026 1 0 H6PD,SPSB1 nssv688630 1 9243828 9319247 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520191 "" S 2026 1 0 H6PD,SPSB1 nsv463950 1 9243828 9319247 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv3n27 nssv539963 S 1557 1 0 H6PD,SPSB1 1780862066_A nssv661584 1 9246497 9319247 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520191 "" S 2026 1 0 H6PD,SPSB1 nssv687341 1 9246497 9319247 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520191 "" S 2026 1 0 H6PD,SPSB1 nssv1591832 1 9246497 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870739 "" S 6533 1 0 H6PD,SPSB1 IS39046 nsv870739 1 9246497 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv131n71 nssv1591832 S 6533 1 0 H6PD,SPSB1 IS39046 essv6984898 1 9250000 9311805 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array esv2750843 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) H6PD,SPSB1 SPC_192 essv6985406 1 9250000 9311805 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array esv2750845 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) H6PD,SPSB1 BEC_149 essv6981500 1 9250000 9327280 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array esv2750846 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) H6PD,SPSB1 BEC_287 esv2750846 1 9250000 9327280 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Nsp SNP Array + Affymetrix Mapping 250K Sty2 SNP Array dgv2e55 essv6985587,essv6981501,essv6981500 M 771 1 0 H6PD,SPSB1 BEC_287 nssv1581125 1 9251876 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871232 "" S 6533 1 0 H6PD,SPSB1 IS35506 nsv871232 1 9251876 9329566 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv131n71 nssv1581125 S 6533 1 0 H6PD,SPSB1 IS35506 essv6980777 1 9255290 9311805 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv2750845 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) SPSB1 BEC_149 essv6985587 1 9255290 9316595 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv2750846 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) SPSB1 BEC_287 essv6981501 1 9255291 9316591 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv2750846 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) SPSB1 BEC_287 essv6983584 1 9255291 9316591 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv2750844 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) SPSB1 BEC_670 essv6987707 1 9255291 9316591 CNV Gain Pinto_et_al_2007 17911159 SNP_array Affymetrix Mapping 250K Sty2 SNP Array esv2750843 "" S 771 Population-based sample from the PopGen project, which consisted of unrelated healthy individuals from Northern Schleswig-Holstein (Northern Germany) SPSB1 SPC_192 nssv1558407 1 9272525 9363627 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870719 "" S 6533 1 0 SPSB1 MS23257 essv4737746 1 9292566 9292989 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2201511 "" S 1 0 1 Samples from several populations that are part of the HapMap project. SPSB1 NA18507 essv3571220 1 9292718 9292718 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1000068 "" S 3 1 0 SPSB1 HuRef nssv1546443 1 9293686 9350456 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871027 "" S 6533 0 1 SPSB1 MS17208 nsv871027 1 9293686 9350456 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv132n71 nssv1546443 S 6533 0 1 SPSB1 MS17208 nssv1530413 1 9293686 9353810 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871319 "" S 6533 0 1 SPSB1 MS10311 nsv871319 1 9293686 9353810 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv132n71 nssv1530413 S 6533 0 1 SPSB1 MS10311 nssv1543349 1 9293686 9391701 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871098 "" S 6533 0 1 SPSB1 MS16153 nssv540129 1 9300451 9336233 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv464172 "" S 1557 0 1 SPSB1 1780854065_A nssv1431791 1 9353942 9354616 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827253 "" S 31 0 1 "" AK20 essv5231075 1 9361917 9363588 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2616653 "" S 1 0 1 "" NA18507 essv4643328 1 9362487 9363139 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2203424 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv5170213 1 9393000 9393819 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2443842 "" S 1 1 0 "" NA18507 nssv693425 1 9437433 9457890 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517755 "" S 2026 0 1 "" nssv658552 1 9447822 9462280 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517755 "" S 2026 0 1 "" nssv653129 1 9455825 9462280 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517755 "" S 2026 0 1 "" nssv674995 1 9455825 9462280 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517755 "" S 2026 0 1 "" nssv661666 1 9457890 9462280 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517755 "" S 2026 0 1 "" nssv670279 1 9457890 9462280 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517755 "" S 2026 0 1 "" nssv692200 1 9457890 9462280 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517755 "" S 2026 0 1 "" essv5297378 1 9516165 9522726 CNV Loss McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2476310 "" S 1 0 1 SLC25A33 NA18507 essv5368321 1 9517491 9520883 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2577357 "" S 1 0 1 "" NA18507 essv32979 1 9518760 9519487 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15031 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19147 essv83591 1 9518760 9519487 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15031 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19190 esv15031 1 9518760 9519487 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28451 essv32979,essv83591 M 451 0 2 "" NA19147,NA19190 essv38846 1 9518771 9520515 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11914 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19257 essv41776 1 9518771 9520515 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11914 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18505 esv11914 1 9518771 9520515 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28451 essv35877,essv38846,essv41776 M 451 0 3 "" NA18505,NA18907,NA19257 essv35877 1 9518853 9520515 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv11914 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18907 nssv3078 1 9519805 9554020 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2076 "" S 9 1 0 Samples from several populations that are part of the HapMap project. SLC25A33 NA18555 nssv1510639 1 9562878 9588951 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871521 "" S 6533 0 1 SLC25A33,TMEM201 SP54988 nssv1558408 1 9578382 9930808 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871610 "" S 6533 1 0 C1orf200,CLSTN1,CTNNBIP1,LZIC,NMNAT1,PIK3CD,TMEM201 MS23257 nssv4948 1 9589883 9610820 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2187 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TMEM201 NA19129 nssv3119 1 9593039 9607985 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2187 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TMEM201 NA18555 nssv619767 1 9594782 9661476 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508847 "" S 4 1 0 Samples from several populations that are part of the HapMap project. C1orf200,PIK3CD,TMEM201 NA10860 nssv621081 1 9594782 9661476 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508847 "" S 4 1 0 C1orf200,PIK3CD,TMEM201 NA15510 nssv623772 1 9594782 9661476 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508847 "" S 4 1 0 Samples from several populations that are part of the HapMap project. C1orf200,PIK3CD,TMEM201 NA18994 nssv1500 1 9596337 9607703 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2187 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TMEM201 NA19240 nssv9906 1 9596410 9616337 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2187 "" S 9 1 0 Samples from several populations that are part of the HapMap project. TMEM201 NA18507 nssv6883 1 9597985 9614177 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2187 "" S 9 1 0 Samples from several populations that are part of the HapMap project. "" NA12156 nssv10282 1 9599480 9609584 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2187 "" S 9 1 0 Samples from several populations that are part of the HapMap project. "" NA18956 nssv3334 1 9600433 9608813 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2187 "" S 9 1 0 Samples from several populations that are part of the HapMap project. "" NA12878 essv3565355 1 9606595 9608107 CNV Insertion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1010171 "" S 3 1 0 "" HuRef nssv1442685 1 9649219 9782796 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832203 "" S 95 0 1 CLSTN1,PIK3CD essv2393758 1 9662837 9663252 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259473 "" S 6 0 0 Samples from several populations that are part of the HapMap project. PIK3CD NA19238 essv2394044 1 9662837 9663252 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259473 "" S 6 0 0 Samples from several populations that are part of the HapMap project. PIK3CD NA19239 essv2394363 1 9662837 9663252 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259473 "" S 6 0 0 Samples from several populations that are part of the HapMap project. PIK3CD NA19240 nssv178729 1 9685183 9688695 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160151 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans PIK3CD nssv1431975 1 9745319 9747784 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827364 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CLSTN1 NA18972 nssv10302 1 9748873 9780074 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2298 "" S 9 0 1 Samples from several populations that are part of the HapMap project. CLSTN1 NA18956 nssv1434156 1 9769142 9777706 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827475 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CLSTN1 NA18570 nsv827475 1 9769142 9777706 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv11n67 nssv1434156 S 31 0 1 CLSTN1 NA18570 nssv1440114 1 9769142 9779958 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827586 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CLSTN1 NA18564 nsv827586 1 9769142 9779958 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv11n67 nssv1440114 S 31 0 1 CLSTN1 NA18564 nssv585382 1 9769237 9779283 CNV Loss Kidd et al 2010b 21111241 Read-depth_analysis,Sequence_alignment Capillary nsv498662 "" S 9 0 1 CLSTN1 nssv1433405 1 9769424 9777934 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827697 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CLSTN1 NA18526 nssv1437214 1 9769424 9777934 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827697 "" S 31 0 1 Samples from several populations that are part of the HapMap project. CLSTN1 NA18949 nsv827697 1 9769424 9777934 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv11n67 nssv1433405,nssv1437214 M 31 0 2 CLSTN1 NA18526,NA18949 nssv1530414 1 9819588 9873875 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871146 "" S 6533 0 1 CTNNBIP1 MS10311 nssv703617 1 10016044 10179754 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527217 "" S 2026 1 0 UBE4B nssv706027 1 10048352 10161784 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv522629 "" S 2026 1 0 UBE4B nssv701302 1 10118527 10123161 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv525216 "" S 2026 1 0 UBE4B essv5304967 1 10152982 10154339 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2562286 "" S 1 0 1 UBE4B NA18507 essv10115 1 10160657 10424335 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv17e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. APITD1,APITD1-CORT,KIF1B,PGD,UBE4B NA19130 essv15694 1 10160657 10424335 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv17e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. APITD1,APITD1-CORT,KIF1B,PGD,UBE4B NA18912 esv397 1 10160657 10505141 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv17e1 "" S 271 APITD1,APITD1-CORT,CORT,DFFA,KIF1B,PEX14,PGD,UBE4B nssv625342 1 10170195 10170662 CNV Insertion Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv512718 "" S 1 1 0 "" 1 essv26972 1 10257291 10257519 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv4531 "" S 1 0 1 Single Asian sample YH KIF1B YH essv5364930 1 10274566 10275850 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2550823 "" S 1 0 1 KIF1B NA18507 nssv3425 1 10288677 10310823 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2409 "" S 9 1 0 Samples from several populations that are part of the HapMap project. KIF1B NA12878 nssv467081 1 10289074 10310291 CNV Loss Conrad et al 2006 16327808 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv437200 "" S 60 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18500 nsv437200 1 10289074 10310291 CNV Loss Conrad et al 2006 16327808 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv1n17 nssv467081 S 60 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18500 nssv466361 1 10291453 10301596 CNV Deletion Korbel et al 2007 17901297 FISH,Oligo_aCGH,PCR,Sequencing 454 nsv436146 "" S 2 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18505 nssv24611 1 10291557 10301433 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8102 "" S 31 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18853 nssv26900 1 10291557 10301433 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8102 "" S 31 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19132 essv34472 1 10292005 10301026 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12065 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18502 essv41876 1 10292005 10301042 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12065 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18505 essv53057 1 10292005 10301042 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12065 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18508 esv12065 1 10292005 10301472 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23835 essv34472,essv41876,essv53057,essv46739 M 451 0 4 KIF1B NA18502,NA18505,NA18508,NA18861 essv46739 1 10292098 10301472 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv12065 "" S 451 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18861 essv5005447 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19249 essv5011379 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19130 essv5011913 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18869 essv5012723 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19132 essv5013970 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA20348 essv5014103 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19444 essv5028433 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18912 essv5029372 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18505 essv5030658 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA20295 essv5031784 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19705 essv5031808 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18867 essv5032695 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18933 essv5033256 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19184 essv5033654 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19703 essv5037021 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19248 essv5045696 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA21418 essv5048097 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18853 essv5049783 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19186 essv5053735 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19215 essv5054475 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA20322 essv5059809 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA21441 essv5060455 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19434 essv5062374 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA21520 essv5062929 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19374 essv5064063 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19452 essv5066898 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18854 essv5071040 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19185 essv5072375 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18510 essv5073299 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18868 essv5074473 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19179 essv5075248 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19235 essv5077233 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19664 essv5081479 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19192 essv5084373 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19180 essv5087410 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19237 essv5089301 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19314 essv5093833 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18935 essv5095610 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19819 essv5098414 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18914 essv5100113 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19238 essv5103254 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19176 essv5104647 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18501 essv5107159 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19213 essv5109789 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA21613 essv5110636 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18506 essv5117819 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18508 essv5118117 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18497 essv5124066 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18861 essv5131012 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18499 essv5131248 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA21300 essv5131639 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA20297 essv5141223 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA20294 essv5142692 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19118 essv5145720 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19207 essv5145827 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19198 essv5146221 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18863 essv5151358 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18500 essv5155081 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19359 essv5158917 1 10292133 10300570 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421759 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18913 nssv695737 1 10292899 10294441 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv1416820 1 10292899 10296090 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818666 "" S 112 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19238 nssv1417808 1 10292899 10296090 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818666 "" S 112 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18853 nssv1417809 1 10292899 10296090 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818666 "" S 112 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18854 nssv1418422 1 10292899 10296090 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818666 "" S 112 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19192 nssv654559 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv656381 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv656820 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv657555 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv658241 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv658813 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv660763 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv663872 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv666539 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv667133 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv667908 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv671141 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv676915 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv679262 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv680299 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv680418 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv682975 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv686246 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv687648 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv690059 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv690144 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv691095 1 10292899 10296090 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515546 "" S 2026 0 1 KIF1B nssv467082 1 10292899 10310291 CNV Loss Conrad et al 2006 16327808 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv437201 "" S 60 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18914 nsv437201 1 10292899 10310291 CNV Loss Conrad et al 2006 16327808 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv1n17 nssv467082 S 60 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18914 nssv627018 1 10293441 10300549 CNV Loss Campbell et al 2011 21397061 Oligo_aCGH Agilent Eichler Human CNP 180K v3.0 + Agilent Eichler Human CNP 180K v2.1 nsv513981 "" S 1414 0 1 KIF1B nssv26885 1 10296160 10301433 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8102 "" S 31 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18502 nssv467741 1 10297766 10301003 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437970 "" S 269 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18500 nssv467852 1 10297766 10301003 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437970 "" S 269 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18912 nssv467963 1 10297766 10301003 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437970 "" S 269 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18914 nssv468074 1 10297766 10301003 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437970 "" S 269 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19130 nssv468185 1 10297766 10301003 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437970 "" S 269 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA19132 nssv471534 1 10297766 10301003 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv437970 "" S 269 0 1 Samples from several populations that are part of the HapMap project. KIF1B NA18502 nssv28055 1 10373501 10383026 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8213 "" S 31 1 0 Samples from several populations that are part of the HapMap project. PGD NA19221 essv3564483 1 10398782 10401173 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1010529 "" S 3 0 1 PGD HuRef nssv11773 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18504 nssv12119 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19173 nssv21428 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA12155 nssv21445 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18980 nssv24596 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA10847 nssv24601 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA12802 nssv24608 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18563 nssv24609 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18564 nssv24615 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18975 nssv26875 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA07029 nssv26887 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18517 nssv26889 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18552 nssv26893 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18853 nssv28037 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18502 nssv28046 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18860 nssv28052 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19132 nssv28538 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA12740 nssv28548 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18572 nssv29251 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA10839 nssv29270 1 10404184 10407232 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8324 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18972 nssv626314 1 10404830 10406384 CNV Loss Arlt et al 2011 21212237 Read-depth_analysis,SNP_array Illumina Genome Analyzer nsv511676 "" S 1 0 1 "" 1 nssv1421441 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18997 nssv1422358 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18552 nssv1423385 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18968 nssv1428814 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 "" AK12 nssv1430331 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 "" AK16 nssv1431792 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 "" AK20 nssv1431986 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18972 nssv1433406 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18526 nssv1437926 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18951 nssv1440115 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827808 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18564 nsv827808 1 10404929 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv12n67 nssv1421441,nssv1422358,nssv1423385,nssv1428814,nssv1433406,nssv1431792,nssv1431986,nssv1430331,nssv1437926,nssv1440115 M 31 0 10 "" AK12,AK16,AK20,NA18526,NA18552,NA18564,NA18951,NA18968,NA18972,NA18997 essv26118 1 10405039 10406535 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv3677 "" S 1 0 1 Single Asian sample YH "" YH essv30190 1 10405061 10406392 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv7749 "" S 1 0 1 "" SJK nssv178840 1 10405068 10406366 CNV Loss Mills et al 2006 16902084 Sequence_alignment Not Provided nsv160262 "" M 24 Whole genome shotgun (WGS) traces that were generated by the HapMap Consortium using genomic DNA of eight African Americans "" essv48637 1 10405137 10406038 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14503 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA07037 essv62918 1 10405137 10406038 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14503 "" S 451 0 1 "" NA15510 essv43960 1 10405137 10406094 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14503 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18909 essv46343 1 10405137 10406094 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14503 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19129 essv49786 1 10405137 10406094 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14503 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA18517 essv75047 1 10405137 10406094 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14503 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12004 essv79347 1 10405137 10406094 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14503 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12749 esv14503 1 10405137 10406094 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26404 essv43960,essv48637,essv46343,essv75047,essv79347,essv62918,essv49786 M 451 0 7 "" NA07037,NA12004,NA12749,NA15510,NA18517,NA18909,NA19129 nssv1425486 1 10405258 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv827919 "" S 31 0 1 "" AK4 nsv827919 1 10405258 10406229 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv12n67 nssv1425486 S 31 0 1 "" AK4 essv5005178 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA18497 essv5010570 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19010 essv5023863 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA18917 essv5030172 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21399 essv5037011 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21401 essv5043282 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA20288 essv5057594 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21682 essv5061676 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21436 essv5072629 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21333 essv5074992 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA18499 essv5079670 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21339 essv5087529 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21295 essv5088559 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21636 essv5094667 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA18930 essv5099736 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21634 essv5102680 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA07045 essv5111430 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19347 essv5115009 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19180 essv5118967 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19138 essv5120264 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21356 essv5122639 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19399 essv5125662 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21418 essv5138311 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19178 essv5142946 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19192 essv5145841 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19983 essv5148686 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19098 essv5151853 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19041 essv5151994 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19194 essv5154504 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA21390 essv5160550 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA19713 essv5160849 1 10466423 10467633 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421360 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA18870 nssv7460 1 10476117 10520758 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2521 "" S 9 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA12156 nssv24613 1 10490771 10494961 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8435 "" S 31 1 0 Samples from several populations that are part of the HapMap project. PEX14 NA18942 nssv1417173 1 10561191 10565784 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818777 "" S 112 0 1 Samples from several populations that are part of the HapMap project. PEX14 NA18550 nssv652091 1 10561191 10565784 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517464 "" S 2026 0 1 PEX14 nssv679135 1 10561191 10565784 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517464 "" S 2026 0 1 PEX14 nssv681545 1 10561191 10565784 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517464 "" S 2026 0 1 PEX14 nssv683372 1 10561191 10565784 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517464 "" S 2026 0 1 PEX14 nssv685750 1 10561191 10565784 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517464 "" S 2026 0 1 PEX14 nssv693755 1 10561191 10565784 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517464 "" S 2026 0 1 PEX14 essv2586077 1 10578911 10580499 CNV Loss Banerjee et al 2011 21479260 SNP_array Affymetrix SNP 6.0 esv275132 "" S 1250 0 1 PEX14 nssv540412 1 10595781 10690372 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv464505 "" S 1557 0 1 CASZ1,PEX14 1780862573_A nsv464505 1 10595781 10690372 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv4n27 nssv540412 S 1557 0 1 CASZ1,PEX14 1780862573_A essv84205 1 10599387 10796739 CNV Loss Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Illumina HumanHap650Y Genotyping BeadChip + Agilent Custom High-Definition-CGH Microarray + [Mapping250K_Sty] Affymetrix Mapping 250K Sty2 SNP Array + [Mapping250K_Nsp] Affymetrix Mapping 250K Nsp SNP Array + Nimblegen human whole-genome 385K CGH array esv29966 "" S 2 0 1 CASZ1,PEX14 HuRef nssv1436327 1 10600149 10717748 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828030 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CASZ1,PEX14 NA18542 nssv1571448 1 10606685 10665950 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871824 "" S 6533 0 1 CASZ1,PEX14 IS32737 nssv1584764 1 10606685 10665950 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871824 "" S 6533 0 1 CASZ1,PEX14 IS37172 nssv1586799 1 10606685 10665950 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871824 "" S 6533 0 1 CASZ1,PEX14 IS37985 nssv1589065 1 10606685 10665950 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871824 "" S 6533 0 1 CASZ1,PEX14 IS38293 nsv871824 1 10606685 10665950 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv133n71 nssv1586799,nssv1571448,nssv1584764,nssv1589065 M 6533 0 4 CASZ1,PEX14 IS32737,IS37172,IS37985,IS38293 nssv1574875 1 10606685 10673019 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871950 "" S 6533 0 1 CASZ1,PEX14 IS33665 nssv1575693 1 10606685 10673019 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871950 "" S 6533 0 1 CASZ1,PEX14 IS33797 nssv1599353 1 10606685 10673019 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871950 "" S 6533 0 1 CASZ1,PEX14 IS41634 nsv871950 1 10606685 10673019 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv133n71 nssv1574875,nssv1575693,nssv1599353 M 6533 0 3 CASZ1,PEX14 IS33665,IS33797,IS41634 nssv1529776 1 10606685 10679786 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870683 "" S 6533 0 1 CASZ1,PEX14 MS10123 nsv870683 1 10606685 10679786 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv133n71 nssv1529776 S 6533 0 1 CASZ1,PEX14 MS10123 nssv1572111 1 10606685 10690372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871361 "" S 6533 0 1 CASZ1,PEX14 IS32888 nssv1589731 1 10606685 10690372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871361 "" S 6533 0 1 CASZ1,PEX14 IS38403 nsv871361 1 10606685 10690372 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv134n71 nssv1589731,nssv1572111 M 6533 0 2 CASZ1,PEX14 IS32888,IS38403 nssv1544219 1 10606685 10699847 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871290 "" S 6533 0 1 CASZ1,PEX14 MS16315 nssv1588172 1 10606685 10699847 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871290 "" S 6533 0 1 CASZ1,PEX14 IS38176 nssv1592093 1 10606685 10699847 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871290 "" S 6533 0 1 CASZ1,PEX14 IS39233 nssv1593365 1 10606685 10699847 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871290 "" S 6533 0 1 CASZ1,PEX14 IS39417 nsv871290 1 10606685 10699847 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv134n71 nssv1593365,nssv1588172,nssv1544219,nssv1592093 M 6533 0 4 CASZ1,PEX14 IS38176,IS39233,IS39417,MS16315 nssv1543350 1 10606685 10719453 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871191 "" S 6533 0 1 CASZ1,PEX14 MS16153 nsv871191 1 10606685 10719453 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv135n71 nssv1543350 S 6533 0 1 CASZ1,PEX14 MS16153 nssv1510640 1 10612529 10689053 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871478 "" S 6533 0 1 CASZ1,PEX14 SP54988 nsv871478 1 10612529 10689053 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv134n71 nssv1510640 S 6533 0 1 CASZ1,PEX14 SP54988 nssv1598246 1 10613535 10673019 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871156 "" S 6533 0 1 CASZ1 IS40828 nsv871156 1 10613535 10673019 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv133n71 nssv1598246 S 6533 0 1 CASZ1 IS40828 nssv540805 1 10613535 10679786 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv464949 "" S 1557 0 1 CASZ1 1780862345_A nssv1549603 1 10613535 10719453 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871070 "" S 6533 0 1 CASZ1 MS18276 nssv540917 1 10613535 10719453 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv465061 "" S 1557 0 1 CASZ1 1780862093_A nsv465061 1 10613535 10719453 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv4n27 nssv540917 S 1557 0 1 CASZ1 1780862093_A nsv871070 1 10613535 10719453 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv135n71 nssv1549603 S 6533 0 1 CASZ1 MS18276 nssv1511309 1 10615881 10679786 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871737 "" S 6533 0 1 CASZ1 SP55021 nsv871737 1 10615881 10679786 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv133n71 nssv1511309 S 6533 0 1 CASZ1 SP55021 nssv1507759 1 10616712 10673019 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870483 "" S 6533 0 1 CASZ1 SP54725 nsv870483 1 10616712 10673019 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv133n71 nssv1507759 S 6533 0 1 CASZ1 SP54725 nssv1585782 1 10616712 10679786 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870460 "" S 6533 0 1 CASZ1 IS37646 nsv870460 1 10616712 10679786 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv133n71 nssv1585782 S 6533 0 1 CASZ1 IS37646 nssv1574988 1 10616712 10724172 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870923 "" S 6533 0 1 CASZ1 IS33684 nsv870923 1 10616712 10724172 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv135n71 nssv1574988 S 6533 0 1 CASZ1 IS33684 nssv701852 1 10616712 10763492 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv525693 "" S 2026 0 1 CASZ1 nssv1530415 1 10616712 10817311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870849 "" S 6533 0 1 CASZ1 MS10311 nssv1423940 1 10618064 10626784 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828141 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CASZ1 NA18947 nssv1433409 1 10620397 10625621 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828252 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CASZ1 NA18526 nssv1440798 1 10620397 10686751 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828364 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CASZ1 NA18969 nssv466805 1 10627275 10654856 CNV Loss Conrad et al 2006 16327808 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv436924 "" S 60 0 1 Samples from several populations that are part of the HapMap project. CASZ1 NA10847 nssv1573162 1 10627275 10679786 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871904 "" S 6533 0 1 CASZ1 IS33248 nssv1442696 1 10627398 10782506 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832314 "" S 95 0 1 CASZ1 nssv1442707 1 10627398 10782506 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832314 "" S 95 0 1 CASZ1 nssv1442718 1 10627398 10782506 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832314 "" S 95 0 1 CASZ1 nssv468296 1 10628678 10640184 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv438081 "" S 269 0 1 Samples from several populations that are part of the HapMap project. CASZ1 NA12146 nssv468407 1 10628678 10640184 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv438081 "" S 269 0 1 Samples from several populations that are part of the HapMap project. CASZ1 NA10847 nssv1546444 1 10632842 10724172 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871469 "" S 6533 0 1 CASZ1 MS17208 nsv871469 1 10632842 10724172 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv135n71 nssv1546444 S 6533 0 1 CASZ1 MS17208 nssv619768 1 10633211 10735797 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508858 "" S 4 1 0 Samples from several populations that are part of the HapMap project. CASZ1 NA10860 nssv1417515 1 10642232 10673019 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv818888 "" S 112 0 1 Samples from several populations that are part of the HapMap project. CASZ1 NA18968 essv3564310 1 10654369 10668236 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv997282 "" S 3 0 1 CASZ1 HuRef essv11014 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA19143 essv13846 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA18854 essv18290 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA10846 essv18597 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA12234 essv21666 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA12248 essv22143 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA10857 essv2783 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA18987 essv3996 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA18970 essv5362 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA18563 essv7352 1 10665089 10843742 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv18e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. CASZ1 NA18570 esv239 1 10665089 10977734 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv19e1 "" S 271 C1orf127,CASZ1 nssv28027 1 10675514 10679354 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8546 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CASZ1 NA07029 nssv28926 1 10675514 10679354 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8546 "" S 31 1 0 Samples from several populations that are part of the HapMap project. CASZ1 NA12740 nssv541028 1 10679786 10719453 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv465172 "" S 1557 0 1 CASZ1 1780862416_A nssv1570673 1 10679786 10724172 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871905 "" S 6533 0 1 CASZ1 IS32322 nssv541114 1 10690489 10738008 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv465283 "" S 1557 0 1 CASZ1 NINDS_198 essv7839 1 10726405 10977734 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv19e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. C1orf127,CASZ1 NA18558 nssv1546445 1 10754909 10817311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871772 "" S 6533 0 1 CASZ1 MS17208 nsv871772 1 10754909 10817311 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv136n71 nssv1546445 S 6533 0 1 CASZ1 MS17208 nssv1549604 1 10763492 10824581 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870589 "" S 6533 0 1 CASZ1 MS18276 nsv870589 1 10763492 10824581 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv136n71 nssv1549604 S 6533 0 1 CASZ1 MS18276 nssv177984 1 10767813 10767813 CNV Insertion Mills et al 2006 16902084 Sequence_alignment Not Provided nsv159406 "" M 24 CASZ1 nssv1543351 1 10781333 10857819 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871617 "" S 6533 0 1 "" MS16153 nssv1558409 1 10781333 10921096 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871155 "" S 6533 1 0 "" MS23257 nssv1442729 1 10826432 11045562 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832425 "" S 95 0 1 C1orf127,MASP2,SRM,TARDBP nssv1442741 1 10826432 11045562 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832425 "" S 95 0 1 C1orf127,MASP2,SRM,TARDBP essv4522724 1 10835960 10836423 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2418090 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv32827 1 10874013 10874782 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv19765 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19147 esv19765 1 10874013 10874782 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27036 essv32827 S 451 0 1 "" NA19147 nssv655703 1 10906538 10907149 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516264 "" S 2026 0 1 "" nssv662101 1 10906538 10907149 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516264 "" S 2026 0 1 "" nssv667169 1 10906538 10907149 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516264 "" S 2026 0 1 "" nssv676652 1 10906538 10907149 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516264 "" S 2026 0 1 "" nssv680546 1 10906538 10907149 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516264 "" S 2026 0 1 "" nssv683701 1 10906538 10907149 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516264 "" S 2026 0 1 "" nssv688415 1 10906538 10907149 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516264 "" S 2026 0 1 "" nssv693249 1 10906538 10907149 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516264 "" S 2026 0 1 "" essv5340923 1 10915938 10916329 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2576089 "" S 1 0 1 "" NA18507 nssv621082 1 10938844 10991103 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508869 "" S 4 1 0 C1orf127 NA15510 essv3981893 1 10965819 10966556 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1628805 "" S 2 0 1 "" HuRef essv5335168 1 10982291 10985877 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2592186 "" S 1 0 1 "" NA18507 essv83020 1 10982754 10984494 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv14228 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA19190 esv14228 1 10982754 10984494 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv23739 essv83020 S 451 0 1 "" NA19190 essv37680 1 11020149 11028638 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv21307 "" S 451 0 1 Samples from several populations that are part of the HapMap project. MASP2 NA19257 esv21307 1 11020149 11028638 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25881 essv37680 S 451 0 1 MASP2 NA19257 essv69707 1 11021703 11025283 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13377 "" S 451 1 0 Samples from several populations that are part of the HapMap project. MASP2 NA12044 esv13377 1 11021703 11025333 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv25881 essv77863,essv69707 M 451 2 0 MASP2 NA06985,NA12044 essv77863 1 11022412 11025333 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13377 "" S 451 1 0 Samples from several populations that are part of the HapMap project. MASP2 NA06985 nssv1509722 1 11025995 11052435 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870879 "" S 6533 0 1 EXOSC10,MASP2,SRM SP54956 nsv870879 1 11025995 11052435 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv137n71 nssv1509722 S 6533 0 1 EXOSC10,MASP2,SRM SP54956 nssv1508298 1 11030026 11052435 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870763 "" S 6533 0 1 EXOSC10,SRM SP54725 nsv870763 1 11030026 11052435 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv137n71 nssv1508298 S 6533 0 1 EXOSC10,SRM SP54725 nssv1505919 1 11034216 11047637 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871818 "" S 6533 0 1 SRM SP54043 nssv1508946 1 11037527 11052435 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870986 "" S 6533 0 1 EXOSC10,SRM SP54591 essv2494076 1 11134836 11135161 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv267860 "" S 157 1 0 Samples from several populations that are part of the HapMap project. MTOR NA18871 essv2495689 1 11134836 11135161 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv267860 "" S 157 1 0 Samples from several populations that are part of the HapMap project. MTOR NA18916 essv2505624 1 11134836 11135161 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv267860 "" S 157 1 0 Samples from several populations that are part of the HapMap project. MTOR NA19005 nssv701963 1 11295225 11312923 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516050 "" S 2026 0 1 "" nssv665889 1 11295225 11320952 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516050 "" S 2026 0 1 "" nssv683456 1 11295225 11320952 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516050 "" S 2026 0 1 "" nssv1442752 1 11311364 11484928 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832536 "" S 95 0 1 PTCHD2 nssv700989 1 11312923 11320952 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv516050 "" S 2026 0 1 "" nssv541193 1 11416419 11443240 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv465394 "" S 1557 0 1 "" 1780854097_A nssv705033 1 11419581 11424018 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv528438 "" S 2026 0 1 "" nssv1530416 1 11454505 11523706 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871842 "" S 6533 0 1 PTCHD2 MS10311 nsv871842 1 11454505 11523706 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv138n71 nssv1530416 S 6533 0 1 PTCHD2 MS10311 nssv298 1 11459664 11490439 CNV Insertion Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2632 "" S 9 1 0 Samples from several populations that are part of the HapMap project. PTCHD2 NA19240 nssv1543352 1 11460564 11536855 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871576 "" S 6533 0 1 PTCHD2 MS16153 nsv871576 1 11460564 11536855 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv138n71 nssv1543352 S 6533 0 1 PTCHD2 MS16153 nssv1574989 1 11465544 11536855 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870530 "" S 6533 0 1 PTCHD2 IS33684 nsv870530 1 11465544 11536855 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv138n71 nssv1574989 S 6533 0 1 PTCHD2 IS33684 nssv1558410 1 11480557 11549445 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871932 "" S 6533 1 0 PTCHD2 MS23257 nssv1442763 1 11484934 11592183 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832647 "" S 95 0 1 PTCHD2 nssv541299 1 11485077 11523706 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv465505 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PTCHD2 HGDP00857 nssv541477 1 11485077 11549445 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv465727 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PTCHD2 HGDP00787 nssv547697 1 11497847 11545566 CNV Gain Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470692 "" S 443 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations PTCHD2 HGDP00599 nssv694500 1 11500418 11517918 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521736 "" S 2026 0 1 PTCHD2 essv5205183 1 11504990 11505756 CNV Insertion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2628262 "" S 1 1 0 PTCHD2 NA18507 essv64673 1 11505139 11505609 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv13120 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PTCHD2 NA07045 esv13120 1 11505139 11505609 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv26916 essv64673 S 451 0 1 PTCHD2 NA07045 essv2581353 1 11522398 11522530 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing 454 GS FLX esv273466 "" S 7 1 0 Samples from several populations that are part of the HapMap project. "" NA12878 nssv697308 1 11536855 11549445 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv520251 "" S 2026 0 1 "" essv5218562 1 11605279 11606978 CNV Deletion McKernan_et_al_2009 19546169 Sequencing AB SOLiD 2BE Sequencing esv2570682 "" S 1 0 1 "" NA18507 essv4788047 1 11605301 11605956 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2017403 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv25649 1 11605423 11605899 CNV Deletion Wang et al 2008 18987735 Sequencing Illumina Genome Analyzer esv3208 "" S 1 0 1 Single Asian sample YH "" YH essv30199 1 11605480 11605771 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv7758 "" S 1 0 1 "" SJK nssv1442774 1 11619670 11759731 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832758 "" S 95 0 1 AGTRAP,C1orf187,FBXO2,FBXO44,FBXO6,MAD2L2 nssv1509723 1 11629378 11647525 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871114 "" S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54956 nsv871114 1 11629378 11647525 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv139n71 nssv1509723 S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54956 nssv1505920 1 11631926 11648913 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871769 "" S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54043 nsv871769 1 11631926 11648913 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv139n71 nssv1505920 S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54043 nssv1507531 1 11631926 11651262 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871392 "" S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54725 nsv871392 1 11631926 11651262 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv139n71 nssv1507531 S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54725 nssv655395 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv660113 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv664907 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv666865 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv673329 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv674188 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv679392 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv681520 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv682277 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv682473 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv683681 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv685412 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv693798 1 11633148 11636150 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515826 "" S 2026 0 1 FBXO2 nssv1510641 1 11633148 11647525 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870711 "" S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54988 nsv870711 1 11633148 11647525 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv139n71 nssv1510641 S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54988 nssv1558411 1 11633148 11815237 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871014 "" S 6533 1 0 AGTRAP,C1orf187,CLCN6,FBXO2,FBXO44,FBXO6,MAD2L2,MTHFR MS23257 nssv1510492 1 11635753 11647525 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871850 "" S 6533 0 1 FBXO2,FBXO44,FBXO6 SP54967 nssv1511310 1 11635753 11647525 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871850 "" S 6533 0 1 FBXO2,FBXO44,FBXO6 SP55021 nssv694449 1 11636150 11639887 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521468 "" S 2026 0 1 FBXO2,FBXO44 nssv1588987 1 11686264 11768839 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870810 "" S 6533 0 1 AGTRAP,C1orf187,MTHFR IS38274 nsv870810 1 11686264 11768839 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv140n71 nssv1588987 S 6533 0 1 AGTRAP,C1orf187,MTHFR IS38274 nssv619769 1 11704027 11753907 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508880 "" S 4 1 0 Samples from several populations that are part of the HapMap project. AGTRAP NA10860 nssv1546446 1 11706071 11778965 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870873 "" S 6533 0 1 AGTRAP,MTHFR MS17208 nsv870873 1 11706071 11778965 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv140n71 nssv1546446 S 6533 0 1 AGTRAP,MTHFR MS17208 nssv1530417 1 11706071 11826663 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871919 "" S 6533 0 1 AGTRAP,CLCN6,MTHFR,NPPA-AS1 MS10311 nssv1506951 1 11720346 11732784 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870510 "" S 6533 1 0 AGTRAP SP54442 nssv1506982 1 11725021 11732784 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871561 "" S 6533 1 0 AGTRAP SP54448 nssv1509724 1 11737218 11767414 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871826 "" S 6533 0 1 "" SP54956 nsv871826 1 11737218 11767414 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv141n71 nssv1509724 S 6533 0 1 "" SP54956 nssv1543353 1 11737218 11778965 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870631 "" S 6533 0 1 MTHFR MS16153 nsv870631 1 11737218 11778965 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv141n71 nssv1543353 S 6533 0 1 MTHFR MS16153 nssv696101 1 11780298 11785365 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv518652 "" S 2026 0 1 MTHFR essv4641147 1 11812152 11812473 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv2280942 "" S 1 0 1 Samples from several populations that are part of the HapMap project. CLCN6 NA18507 nssv703975 1 11823412 11832101 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527521 "" S 2026 0 1 CLCN6,NPPA,NPPA-AS1 nssv652751 1 11851417 11851482 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517385 "" S 2026 0 1 "" nssv653897 1 11851417 11851482 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517385 "" S 2026 0 1 "" nssv656721 1 11851417 11851482 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517385 "" S 2026 0 1 "" nssv669294 1 11851417 11851482 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517385 "" S 2026 0 1 "" nssv673526 1 11851417 11851482 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517385 "" S 2026 0 1 "" nssv681416 1 11851417 11851482 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517385 "" S 2026 0 1 "" nssv690321 1 11851417 11851482 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517385 "" S 2026 0 1 "" nssv1570674 1 11851482 11909208 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871350 "" S 6533 0 1 KIAA2013 IS32322 nsv871350 1 11851482 11909208 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv142n71 nssv1570674 S 6533 0 1 KIAA2013 IS32322 nssv1588173 1 11859991 11917763 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871776 "" S 6533 0 1 KIAA2013,PLOD1 IS38176 nsv871776 1 11859991 11917763 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv142n71 nssv1588173 S 6533 0 1 KIAA2013,PLOD1 IS38176 nssv1530418 1 11859991 11954617 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870926 "" S 6533 0 1 KIAA2013,PLOD1 MS10311 nssv1549605 1 11864071 11923257 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870866 "" S 6533 0 1 KIAA2013,PLOD1 MS18276 nsv870866 1 11864071 11923257 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv142n71 nssv1549605 S 6533 0 1 KIAA2013,PLOD1 MS18276 nssv1511311 1 11881803 11917763 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870723 "" S 6533 0 1 KIAA2013,PLOD1 SP55021 nssv1423944 1 11912209 11915865 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828475 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18582 essv76198 1 11912455 11916071 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16673 "" S 451 0 1 Samples from several populations that are part of the HapMap project. "" NA12414 esv16673 1 11912455 11916071 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv22435 essv76198 S 451 0 1 "" NA12414 essv73539 1 11953358 11954096 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv17941 "" S 451 1 0 Samples from several populations that are part of the HapMap project. PLOD1 NA12156 esv17941 1 11953358 11954096 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv27905 essv73539 S 451 1 0 PLOD1 NA12156 nssv1585783 1 11966751 12035307 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870502 "" S 6533 0 1 MFN2,MIIP IS37646 nssv547698 1 11973221 12038278 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470693 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations MFN2,MIIP HGDP00556 nssv1519546 1 11976617 12004921 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871917 "" S 6533 0 1 MFN2,MIIP SP81085 essv2502427 1 11988806 11989196 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv268997 "" S 157 1 0 Samples from several populations that are part of the HapMap project. MFN2 NA18948 essv2508678 1 11988806 11989196 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv268997 "" S 157 1 0 Samples from several populations that are part of the HapMap project. MFN2 NA18592 essv2509958 1 11988806 11989196 CNV Insertion 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv268997 "" S 157 1 0 Samples from several populations that are part of the HapMap project. MFN2 NA18593 nssv649851 1 12022313 12182502 CNV Complex Locke et al 2006 16826518 BAC_aCGH Eichler Segmental Duplication BAC array nsv469830 "" M 265 Samples from several populations that are part of the HapMap project. MIR4632,TNFRSF1B,TNFRSF8 essv28542 1 12045141 12045477 CNV Loss Ahn et al 2009 19470904 Sequencing Illumina Genome Analyzer esv6101 "" S 1 0 1 "" SJK nssv541698 1 12052638 12064048 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466060 "" S 1557 0 1 TNFRSF8 1780862021_A nssv702102 1 12064048 12091110 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv525898 "" S 2026 0 1 TNFRSF8 essv4317882 1 12072780 12072878 CNV Deletion Levy et al 2007 17803354 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv1290308 "" S 2 0 1 TNFRSF8 HuRef nssv619770 1 12080564 12217689 CNV Insertion Teague et al 2010 20534489 BAC_aCGH,OEA_assembly,Oligo_aCGH,Optical_mapping,Paired-end_mapping Optical Mapping nsv508891 "" S 4 1 0 Samples from several populations that are part of the HapMap project. MIR4632,TNFRSF1B,TNFRSF8,VPS13D NA10860 nssv1419048 1 12126165 12126349 CNV Loss Kim_et_al_2009 19587683 Oligo_aCGH,Sequencing,SNP_array Agilent Custom 24M CGH Array nsv820293 "" S 2 0 1 TNFRSF8 AK1 nssv550318 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA10492 nssv550319 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA10494 nssv550320 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA10967 nssv550321 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA10969 nssv550322 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA10970 nssv550323 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA10971 nssv550324 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA10976 nssv550325 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA10979 nssv550326 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA11776 nssv550327 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA15724 nssv550328 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA15725 nssv550329 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA15726 nssv550330 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA15727 nssv550331 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA15728 nssv550332 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA15730 nssv550333 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA15732 nssv550334 1 12137851 12354230 CNV Gain Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 1 0 MIR4632,TNFRSF1B,VPS13D NA15733 nssv550335 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA16688 nssv550336 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA17014 nssv550337 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA17015 nssv550338 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA17017 nssv550339 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA17020 nssv550340 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA17051 nssv550341 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA17052 nssv550342 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D NA17059 nssv550343 1 12137851 12354230 CNV Loss Sharp et al 2005 15918152 BAC_aCGH,FISH Eichler Segmental Duplication BAC array nsv471622 "" S 48 0 1 MIR4632,TNFRSF1B,VPS13D P86GA nssv1506602 1 12146826 12170878 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871802 "" S 6533 1 0 TNFRSF1B SP54381 nsv871802 1 12146826 12170878 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv143n71 nssv1506602 S 6533 1 0 TNFRSF1B SP54381 nssv1508007 1 12146826 12171607 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871542 "" S 6533 1 0 TNFRSF1B SP54650 nsv871542 1 12146826 12171607 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv143n71 nssv1508007 S 6533 1 0 TNFRSF1B SP54650 nssv703399 1 12146826 12189852 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv527024 "" S 2026 0 1 MIR4632,TNFRSF1B nssv1506952 1 12156341 12189852 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870819 "" S 6533 1 0 MIR4632,TNFRSF1B SP54442 nssv1506983 1 12156341 12189852 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870819 "" S 6533 1 0 MIR4632,TNFRSF1B SP54448 nssv1500665 1 12165045 12168762 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871005 "" S 6533 1 0 TNFRSF1B SP50179 nssv1501072 1 12165045 12172357 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871782 "" S 6533 0 1 TNFRSF1B SP50908 nsv871782 1 12165045 12172357 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv144n71 nssv1501072 S 6533 0 1 TNFRSF1B SP50908 nssv1516584 1 12165045 12173475 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871185 "" S 6533 0 1 TNFRSF1B SP56874 nssv1519119 1 12165045 12173475 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871185 "" S 6533 0 1 TNFRSF1B SP80957 nsv871185 1 12165045 12173475 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv144n71 nssv1519119,nssv1516584 M 6533 0 2 TNFRSF1B SP56874,SP80957 nssv1499400 1 12165045 12174072 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871267 "" S 6533 0 1 TNFRSF1B SP50159 nsv871267 1 12165045 12174072 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv144n71 nssv1499400 S 6533 0 1 TNFRSF1B SP50159 nssv1512369 1 12165380 12168762 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871537 "" S 6533 0 1 TNFRSF1B SP55465 nssv1509310 1 12165964 12174072 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871623 "" S 6533 0 1 TNFRSF1B SP54782 nsv871623 1 12165964 12174072 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv144n71 nssv1509310 S 6533 0 1 TNFRSF1B SP54782 nssv1509725 1 12169715 12186810 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871714 "" S 6533 0 1 MIR4632,TNFRSF1B SP54956 essv2585374 1 12276894 12279663 CNV Loss Banerjee et al 2011 21479260 SNP_array Affymetrix SNP 6.0 esv275384 "" S 1250 0 1 VPS13D nssv695253 1 12296335 12564830 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517848 "" S 2026 1 0 DHRS3,SNORA59A,SNORA59B,VPS13D nssv7522 1 12315193 12360087 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2743 "" S 9 0 1 Samples from several populations that are part of the HapMap project. VPS13D NA12156 nssv6975 1 12393279 12438696 CNV Loss Kidd et al 2008 18451855 BAC_aCGH,FISH,MCD_analysis,OEA_assembly,Read-depth_analysis Capillary nsv2854 "" S 9 0 1 Samples from several populations that are part of the HapMap project. VPS13D NA12156 nssv705034 1 12425014 12429547 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv528439 "" S 2026 0 1 VPS13D nssv1417810 1 12431530 12456055 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv817617 "" S 112 0 1 Samples from several populations that are part of the HapMap project. VPS13D NA18853 esv631 1 12521755 13749642 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent + Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv20e1 "" S 271 AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,LRRC38,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 nssv694501 1 12522009 12607424 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv521737 "" S 2026 0 1 DHRS3 nssv1546447 1 12525566 12586361 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871052 "" S 6533 0 1 DHRS3 MS17208 nssv541787 1 12547688 12592983 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466172 "" S 1557 0 1 DHRS3 NINDS_71 nssv541870 1 12547688 12607424 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466283 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations DHRS3 HGDP00259 nssv1504519 1 12555342 12612279 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870568 "" S 6533 1 0 DHRS3 SP52559 nsv870568 1 12555342 12612279 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv145n71 nssv1504519 S 6533 1 0 DHRS3 SP52559 nssv1518647 1 12555342 12620877 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870676 "" S 6533 1 0 DHRS3 SP57873 nsv870676 1 12555342 12620877 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv145n71 nssv1518647 S 6533 1 0 DHRS3 SP57873 nssv1522963 1 12562714 12632141 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871922 "" S 6533 1 0 AADACL4,DHRS3 SP53518 nsv871922 1 12562714 12632141 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv145n71 nssv1522963 S 6533 1 0 AADACL4,DHRS3 SP53518 nssv1523779 1 12564830 12612279 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870867 "" S 6533 1 0 DHRS3 SP54191 essv13601 1 12596978 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv21e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA19127 essv22216 1 12596978 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv21e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA12044 essv2582 1 12596978 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv21e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA18990 essv15250 1 12596978 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19094 essv1738 1 12596978 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18997 essv17525 1 12596978 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12762 essv3141 1 12596978 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18969 essv4439 1 12596978 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18552 essv4720 1 12596978 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18622 nssv453130 1 12596978 13667714 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428410 "" S 62 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 HGDP00463 essv19269 1 12596978 13749642 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,LRRC38,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA10838 essv21792 1 12596978 13749642 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,LRRC38,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12239 essv24139 1 12596978 13749642 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv20e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,AADACL4,C1orf158,DHRS3,HNRNPCL1,LOC440563,LOC649330,LRRC38,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA10847 nssv1520366 1 12615712 12697586 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871219 "" S 6533 1 0 AADACL4 SP50830 nssv655876 1 12641798 12645771 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515525 "" S 2026 0 1 AADACL4 nssv663825 1 12641798 12645771 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515525 "" S 2026 0 1 AADACL4 nssv687835 1 12641798 12645771 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515525 "" S 2026 0 1 AADACL4 nssv691346 1 12641798 12645771 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv515525 "" S 2026 0 1 AADACL4 nssv12449 1 12665734 12670547 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8657 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA19173 nssv28045 1 12665734 12670547 CNV Loss Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8657 "" S 31 0 1 Samples from several populations that are part of the HapMap project. "" NA18853 essv4851711 1 12665880 12669324 CNV Deletion Bentley_et_al_2008 18987734 Sequencing Illumina GA1 DNA Sequencer esv1936135 "" S 1 0 1 Samples from several populations that are part of the HapMap project. "" NA18507 essv2394724 1 12669189 12674742 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259758 "" S 144 0 0 Samples from several populations that are part of the HapMap project. "" NA18498 essv2395741 1 12669189 12674742 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259758 "" S 144 0 0 Samples from several populations that are part of the HapMap project. "" NA18853 essv2396569 1 12669189 12674742 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259758 "" S 144 0 0 Samples from several populations that are part of the HapMap project. "" NA18507 essv2399336 1 12669189 12674742 OTHER Tandem duplication 1000_Genomes_Consortium_Pilot_Project 20981092 Sequencing Illumina Genome Analyzer II esv259758 "" S 144 0 0 Samples from several populations that are part of the HapMap project. "" NA18522 nssv541946 1 12697586 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466394 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations AADACL3,C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00153 nssv1520367 1 12702205 12769266 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871119 "" S 6533 1 0 AADACL3,C1orf158,PRAMEF12 SP50830 essv6526 1 12710993 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. AADACL3,C1orf158,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18611 nssv1564934 1 12717537 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871589 "" S 6533 1 0 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 IS30319 nsv871589 1 12717537 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv146n71 nssv1564934 S 6533 1 0 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 IS30319 nssv454154 1 12724432 12942438 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428410 "" S 62 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 HGDP00462 nssv454165 1 12724432 12942438 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428410 "" S 62 1 0 Samples from several populations that are part of the HapMap project. C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA18916 nssv454176 1 12724432 12942438 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428410 "" S 62 1 0 Samples from several populations that are part of the HapMap project. C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA19096 nssv454221 1 12724432 13667714 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428410 "" S 62 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf158,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 HGDP00450 nssv454232 1 12724432 13667714 CNV Gain Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428410 "" S 62 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf158,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 HGDP00473 nssv454243 1 12724432 13667714 CNV Loss Perry et al 2008b 18775914 BAC_aCGH,FISH,PCR Sanger H. sapiens Whole Genome Tile Path 28.7k v3 nsv428410 "" S 62 0 1 Samples from several populations that are part of the HapMap project. C1orf158,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19189 essv22686 1 12728523 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. C1orf158,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12004 nssv1442785 1 12730060 12941777 CNV Gain Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832869 "" S 95 1 0 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nssv1442796 1 12730060 12941777 CNV Loss Wong_et_al_2007 17160897 BAC_aCGH SMRT Whole Genome Tile Path BAC CGH Array nsv832869 "" S 95 0 1 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 nssv1574399 1 12731178 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871523 "" S 6533 1 0 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 IS33553 nsv871523 1 12731178 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv146n71 nssv1574399 S 6533 1 0 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 IS33553 nssv1540573 1 12733155 12765587 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871047 "" S 6533 1 0 C1orf158,PRAMEF12 MS14919 nssv1564453 1 12733155 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871711 "" S 6533 1 0 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 IS30213 nsv871711 1 12733155 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv146n71 nssv1564453 S 6533 1 0 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 IS30213 essv3668 1 12741650 12846549 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv23e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 NA18991 essv12911 1 12741650 13668036 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. C1orf158,HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19094 nssv547700 1 12743457 12836482 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470695 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00702 nssv705350 1 12743457 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv528703 "" S 2026 0 1 C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 essv8035 1 12743662 12846549 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv23e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. C1orf158,HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 NA19103 essv3566471 1 12744887 12745098 CNV Deletion Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array Sanger Sequencing esv993047 "" S 3 0 1 "" HuRef essv11557 1 12745698 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv24e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA19173 essv13702 1 12745698 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv24e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA19119 essv14054 1 12745698 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv24e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA18861 essv17827 1 12745698 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv24e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA10831 essv2857 1 12745698 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv24e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA18953 essv3731 1 12745698 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv24e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA18961 essv5244 1 12745698 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv24e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA18624 essv10475 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18515 essv11698 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19154 essv12773 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19120 essv1381 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19007 essv15030 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19129 essv16214 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19161 essv17159 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19171 essv18416 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12249 essv22442 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12761 essv22849 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12004 essv2697 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18967 essv4016 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18970 essv6145 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18532 essv6322 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18609 essv8779 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA19092 essv9820 1 12745698 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18863 essv2050 1 12745698 13749642 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,LRRC38,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18949 nssv1592573 1 12746810 13614119 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871441 "" S 6533 1 0 HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 IS39243 nsv871441 1 12746810 13614119 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv147n71 nssv1592573 S 6533 1 0 HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 IS39243 essv19818 1 12752600 12846549 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv23e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12,PRAMEF2 NA10847 nssv542035 1 12756840 12834675 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466505 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1798860570_A nsv466505 1 12756840 12834675 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv5n27 nssv542035 S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1798860570_A nssv1526977 1 12758455 12790824 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870781 "" S 6533 0 1 PRAMEF1,PRAMEF12 SP58031 nssv1535934 1 12758455 12790824 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870781 "" S 6533 0 1 PRAMEF1,PRAMEF12 MS12551 nsv870781 1 12758455 12790824 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv148n71 nssv1535934,nssv1526977 M 6533 0 2 PRAMEF1,PRAMEF12 MS12551,SP58031 nssv1547827 1 12758455 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870894 "" S 6533 0 1 PRAMEF1,PRAMEF12 MS17580 nssv1563674 1 12758455 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870894 "" S 6533 0 1 PRAMEF1,PRAMEF12 IS30035 nssv1564094 1 12758455 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870894 "" S 6533 0 1 PRAMEF1,PRAMEF12 IS30165 nssv1585649 1 12758455 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870894 "" S 6533 0 1 PRAMEF1,PRAMEF12 IS37605 nssv1595079 1 12758455 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870894 "" S 6533 0 1 PRAMEF1,PRAMEF12 IS40103 nsv870894 1 12758455 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv148n71 nssv1595079,nssv1564094,nssv1563674,nssv1547827,nssv1585649 M 6533 0 5 PRAMEF1,PRAMEF12 IS30035,IS30165,IS37605,IS40103,MS17580 nssv1523691 1 12758455 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871936 "" S 6533 1 0 PRAMEF1,PRAMEF11,PRAMEF12 SP54139 nssv542118 1 12758455 12833787 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466616 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00952 nsv466616 1 12758455 12833787 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv6n27 nssv542118 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00952 nssv542199 1 12758455 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466727 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00007 nssv542299 1 12758455 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466838 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP01366 nssv542386 1 12758455 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv466949 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1780862077_A nssv675460 1 12758455 12836483 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 nsv466727 1 12758455 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv5n27 nssv542199 S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP00007 nsv466838 1 12758455 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv6n27 nssv542299 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 HGDP01366 nsv466949 1 12758455 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv6n27 nssv542386 S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF12 1780862077_A nssv1535766 1 12758455 12942407 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871665 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 MS12466 nsv871665 1 12758455 12942407 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv149n71 nssv1535766 S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 MS12466 essv14768 1 12759162 13052721 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv24e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 NA19159 essv22676 1 12759162 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12752 essv23457 1 12759162 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA10854 essv24831 1 12759162 13667714 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Agilent dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA07000 essv22720 1 12760427 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12239 essv22789 1 12760427 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12753 essv2742 1 12760427 13665979 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18965 essv20489 1 12760427 13672044 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF12,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12874 essv101326 1 12762027 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21805 essv95661 1 12762027 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21841 essv96441 1 12762027 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22261 essv96690 1 12762027 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22011 essv96818 1 12762027 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21659 essv97426 1 12762027 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21879 essv98305 1 12762027 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21772 essv99314 1 12762027 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22275 essv93105 1 12762027 12842002 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21863 essv94423 1 12762027 12842002 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21808 essv95313 1 12762027 12842002 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21872 essv96954 1 12762027 12842002 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21817 essv99068 1 12762027 12842002 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21938 essv100377 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22300 essv100556 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22298 essv100986 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21693 essv92841 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21939 essv94766 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21791 essv95868 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21911 essv96187 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22007 essv97209 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22075 essv97675 1 12762027 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22278 essv100225 1 12762027 13065155 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 22286 essv95436 1 12762027 13065155 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 21847 essv101177 1 12762027 13072528 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 21618 essv92594 1 12762027 13072528 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 22233 essv94614 1 12762027 13072528 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 21932 essv96257 1 12762027 13072528 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 22371 essv98419 1 12762027 13072528 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8 22352 nssv1421068 1 12762564 12815652 CNV Duplication Ju_et_al_2010 20802225 Sequencing Illumina IIx nsv821559 "" S 1 1 0 Samples from several populations that are part of the HapMap project. PRAMEF1,PRAMEF11 NA10851 nssv1431793 1 12762564 12820751 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828586 "" S 31 0 1 PRAMEF1,PRAMEF11 AK20 nsv828586 1 12762564 12820751 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv13n67 nssv1431793 S 31 0 1 PRAMEF1,PRAMEF11 AK20 nssv547949 1 12762846 12787958 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471539 "" S 3 PRAMEF1 nssv547950 1 12762846 12787958 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471539 "" S 3 PRAMEF1 nssv547951 1 12762846 12787958 CNV Duplication Alkan et al 2009 19718026 BAC_aCGH,Read-depth_analysis Illumina Genome Analyzer and Roche/454 sequencer. For arrayCGH validation experiments we used Nimblegen nsv471539 "" S 3 PRAMEF1 essv61072 1 12763195 12975525 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15812 "" S 451 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA12239 esv15812 1 12763195 12975525 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28644 essv47188,essv36576,essv75263,essv61072,essv76255,essv49683 M 451 6 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA11894,NA12004,NA12239,NA12414,NA18517,NA18861 essv49683 1 12764158 12975525 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15812 "" S 451 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA18517 essv3586626 1 12764394 12873662 CNV Gain Pang_et_al_2010 20482838 Oligo_aCGH,Sequencing,SNP_array NimbleGen 42M CGH Array esv990214 "" S 3 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 HuRef essv63487 1 12764502 12802477 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16950 "" S 451 0 1 PRAMEF1 NA15510 esv16950 1 12764502 12820033 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv28644 essv69023,essv63487 M 451 0 2 PRAMEF1,PRAMEF11 NA12044,NA15510 essv5003555 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18144 essv5006338 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21512 essv5009132 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19468 essv5009774 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19066 essv5012238 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18611 essv5013828 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21317 essv5017667 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19436 essv5018478 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21635 essv5018496 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12874 essv5018867 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18963 essv5022261 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18161 essv5023516 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21111 essv5024352 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12546 essv5024400 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21088 essv5025654 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21318 essv5027197 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18991 essv5029580 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21383 essv5030453 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19720 essv5034347 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA20828 essv5038349 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19334 essv5038935 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA20337 essv5039373 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18925 essv5040928 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12044 essv5040953 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19919 essv5041350 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19789 essv5048343 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21784 essv5049008 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA10853 essv5050218 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA10838 essv5051593 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18593 essv5053293 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19747 essv5053532 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18614 essv5057726 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19748 essv5059824 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA17962 essv5061594 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA11891 essv5061766 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21102 essv5064090 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21596 essv5065514 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA20542 essv5066353 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18955 essv5067055 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18990 essv5068309 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21740 essv5072990 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19681 essv5073546 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18109 essv5074962 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21381 essv5077663 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA20887 essv5082781 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21367 essv5084483 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18981 essv5088719 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12383 essv5089177 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21414 essv5089601 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19770 essv5097924 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA17965 essv5098033 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA10847 essv5098165 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21316 essv5098485 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA20818 essv5102044 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19236 essv5102257 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18924 essv5102370 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18624 essv5104297 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19683 essv5106036 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19083 essv5107947 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA11918 essv5109345 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21119 essv5109420 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18965 essv5109453 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21636 essv5111327 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12753 essv5114531 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18923 essv5115549 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19908 essv5115604 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21144 essv5116203 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18863 essv5116223 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21519 essv5116865 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA17974 essv5117560 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18617 essv5120396 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12344 essv5121017 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19721 essv5122638 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19103 essv5122668 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA21364 essv5124804 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12718 essv5128528 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18135 essv5129922 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA17996 essv5131081 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18622 essv5132926 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18969 essv5133462 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19313 essv5134010 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18555 essv5138370 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18559 essv5139478 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18702 essv5140420 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA20810 essv5140930 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19915 essv5143438 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19390 essv5144838 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12763 essv5150257 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA12375 essv5159266 1 12764515 12894420 CNV Deletion Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA18951 essv5159736 1 12764515 12894420 CNV Duplication Altshuler_et_al_2010 20811451 SNP_array Affymetrix Genome-Wide Human SNP 6.0 Array + Illumina Human1Mv1 DNA Analysis BeadChip esv2421662 "" S 1184 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 NA19914 essv36576 1 12765214 12923618 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15812 "" S 451 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA11894 nssv1513822 1 12765587 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871208 "" S 6533 0 1 PRAMEF1 SP55851 nssv1529497 1 12765587 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871208 "" S 6533 0 1 PRAMEF1 SP81557 nssv1595770 1 12765587 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871208 "" S 6533 0 1 PRAMEF1 IS40319 nsv871208 1 12765587 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv150n71 nssv1529497,nssv1595770,nssv1513822 M 6533 0 3 PRAMEF1 IS40319,SP55851,SP81557 nssv1524224 1 12765587 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871497 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP54921 nssv1563190 1 12765587 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871497 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS25891 nssv1563722 1 12765587 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871497 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS30054 nssv26878 1 12768742 13389684 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8768 "" S 31 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA10847 nssv1563603 1 12769266 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871761 "" S 6533 0 1 PRAMEF1 MS26123 nsv871761 1 12769266 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv150n71 nssv1563603 S 6533 0 1 PRAMEF1 MS26123 nssv1440799 1 12769321 12832142 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828697 "" S 31 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 NA18969 nsv828697 1 12769321 12832142 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv13n67 nssv1440799 S 31 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 NA18969 nssv1424726 1 12769321 12842627 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828808 "" S 31 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 AK2 nsv828808 1 12769321 12842627 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv14n67 nssv1424726 S 31 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 AK2 essv75263 1 12769444 12938597 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15812 "" S 451 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA12004 essv95999 1 12769531 12840040 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22127 essv93282 1 12769531 12842002 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22170 essv99649 1 12769531 12842002 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 22217 nssv1552211 1 12769585 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871479 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS19289 nsv871479 1 12769585 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv151n71 nssv1552211 S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS19289 nssv1520156 1 12771679 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871960 "" S 6533 0 1 PRAMEF1 SP50713 nssv1520859 1 12771679 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871960 "" S 6533 0 1 PRAMEF1 SP51279 nssv1523227 1 12771679 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871960 "" S 6533 0 1 PRAMEF1 SP53803 nssv1523360 1 12771679 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871960 "" S 6533 0 1 PRAMEF1 SP53994 nssv1584279 1 12771679 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871960 "" S 6533 0 1 PRAMEF1 IS36955 nssv1584454 1 12771679 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871960 "" S 6533 0 1 PRAMEF1 IS37030 nsv871960 1 12771679 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv150n71 nssv1584454,nssv1520859,nssv1584279,nssv1520156,nssv1523227,nssv1523360 M 6533 0 6 PRAMEF1 IS36955,IS37030,SP50713,SP51279,SP53803,SP53994 nssv1526525 1 12771679 12805718 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870524 "" S 6533 1 0 PRAMEF1 SP57610 nssv1588088 1 12771679 12805718 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870524 "" S 6533 1 0 PRAMEF1 IS38152 nsv870524 1 12771679 12805718 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv153n71 nssv1588088,nssv1526525 M 6533 2 0 PRAMEF1 IS38152,SP57610 nssv1519867 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP50592 nssv1519913 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP50612 nssv1520283 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP50791 nssv1521720 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP52553 nssv1522362 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP52933 nssv1522829 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP53449 nssv1525656 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP56757 nssv1527086 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP58141 nssv1527395 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP58404 nssv1528510 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP81260 nssv1531859 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS10682 nssv1531866 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS10685 nssv1536255 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS12662 nssv1537583 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS13253 nssv1540501 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS14872 nssv1540844 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS15060 nssv1547243 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS17255 nssv1555614 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS21465 nssv1555866 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS21677 nssv1557173 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS22454 nssv1559185 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS23770 nssv1563214 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS25902 nssv1573608 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS33460 nssv1575271 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS33691 nssv1576087 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS33868 nssv1577170 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS34381 nssv1581739 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS35704 nssv1582205 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS35846 nssv1584539 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS37064 nssv1587419 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS38050 nssv1587683 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS38098 nssv1591282 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS38669 nssv1594805 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS40029 nssv1595482 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS40237 nssv1595788 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS40329 nssv1596524 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS40556 nssv1597207 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS40769 nssv1598144 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS41051 nssv1598434 1 12771679 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS41340 nssv1598492 1 12771679 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871302 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS40843 nsv871302 1 12771679 12810136 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv152n71 nssv1527395,nssv1528510,nssv1576087,nssv1582205,nssv1563214,nssv1584539,nssv1598434,nssv1595788,nssv1587683,nssv1522362,nssv1522829,nssv1520283,nssv1555614,nssv1555866,nssv1594805,nssv1547243,nssv1595482,nssv1587419,nssv1540501,nssv1573608,nssv1527086,nssv1581739,nssv1598492,nssv1557173,nssv1597207,nssv1519867,nssv1540844,nssv1531866,nssv1531859,nssv1598144,nssv1536255,nssv1525656,nssv1559185,nssv1521720,nssv1596524,nssv1537583,nssv1575271,nssv1577170,nssv1519913,nssv1591282 M 6533 20 20 PRAMEF1,PRAMEF11 IS33460,IS33691,IS33868,IS34381,IS35704,IS35846,IS37064,IS38050,IS38098,IS38669,IS40029,IS40237,IS40329,IS40556,IS40769,IS40843,IS41051,IS41340,MS10682,MS10685,MS12662,MS13253,MS14872,MS15060,MS17255,MS21465,MS21677,MS22454,MS23770,MS25902,SP50592,SP50612,SP50791,SP52553,SP52933,SP53449,SP56757,SP58141,SP58404,SP81260 nssv1552482 1 12771679 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871870 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS19454 nssv1570931 1 12771679 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871870 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS32361 nsv871870 1 12771679 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv154n71 nssv1552482,nssv1570931 M 6533 2 0 PRAMEF1,PRAMEF11 IS32361,MS19454 nssv1584485 1 12771679 12834675 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870823 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 IS37044 nssv1600511 1 12771679 12834675 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870823 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 IS41894 nsv870823 1 12771679 12834675 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv155n71 nssv1584485,nssv1600511 M 6533 1 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 IS37044,IS41894 nssv1597389 1 12771679 12835088 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871190 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 IS40799 nsv871190 1 12771679 12835088 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv156n71 nssv1597389 S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 IS40799 nssv1521923 1 12771679 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871622 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP52634 nssv1525609 1 12771679 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871622 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56731 nssv1525847 1 12771679 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871622 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56845 nssv1557443 1 12771679 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871622 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS22678 nssv1559302 1 12771679 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871622 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS23868 nssv1577150 1 12771679 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871622 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS34374 nssv1598193 1 12771679 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871622 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS40838 nsv871622 1 12771679 12841261 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv155n71 nssv1525609,nssv1598193,nssv1559302,nssv1521923,nssv1525847,nssv1557443,nssv1577150 M 6533 2 5 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS34374,IS40838,MS22678,MS23868,SP52634,SP56731,SP56845 nssv1521440 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP52376 nssv1521488 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP52393 nssv1521880 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP52625 nssv1523103 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP53643 nssv1523426 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54026 nssv1525289 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56395 nssv1525931 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56899 nssv1526010 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56938 nssv1528178 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP81149 nssv1531246 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS10386 nssv1535623 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS12331 nssv1538336 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS13694 nssv1540647 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS14943 nssv1541592 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS15383 nssv1554328 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS20725 nssv1554968 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS21124 nssv1559274 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS23811 nssv1560727 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS24672 nssv1579356 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35088 nssv1582155 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35802 nssv1582295 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35910 nssv1582524 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35982 nssv1583968 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS36752 nssv1586364 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS37753 nssv1587437 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38054 nssv1587450 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38055 nssv1587518 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38060 nssv1588162 1 12771679 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38170 nssv1595780 1 12771679 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871734 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS40326 nsv871734 1 12771679 12845198 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv155n71 nssv1526010,nssv1523426,nssv1582524,nssv1521488,nssv1525931,nssv1588162,nssv1528178,nssv1554328,nssv1554968,nssv1582295,nssv1541592,nssv1531246,nssv1587518,nssv1521880,nssv1579356,nssv1521440,nssv1523103,nssv1583968,nssv1586364,nssv1560727,nssv1525289,nssv1587437,nssv1559274,nssv1540647,nssv1582155,nssv1587450,nssv1538336,nssv1535623,nssv1595780 M 6533 14 15 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35088,IS35802,IS35910,IS35982,IS36752,IS37753,IS38054,IS38055,IS38060,IS38170,IS40326,MS10386,MS12331,MS13694,MS14943,MS15383,MS20725,MS21124,MS23811,MS24672,SP52376,SP52393,SP52625,SP53643,SP54026,SP56395,SP56899,SP56938,SP81149 nssv1554770 1 12771679 12848958 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871477 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS20987 nsv871477 1 12771679 12848958 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv151n71 nssv1554770 S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS20987 nssv1555404 1 12771679 12861980 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871890 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 MS21315 nssv1556862 1 12771679 12861980 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871890 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 MS22231 nssv1597730 1 12771679 12861980 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871890 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 IS41243 nssv1598439 1 12771679 12861980 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871890 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 IS40819 nsv871890 1 12771679 12861980 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv157n71 nssv1598439,nssv1597730,nssv1556862,nssv1555404 M 6533 3 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 IS40819,IS41243,MS21315,MS22231 nssv1541883 1 12771679 12886477 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871442 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 MS15525 nsv871442 1 12771679 12886477 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv158n71 nssv1541883 S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4 MS15525 nssv1540825 1 12771679 12924515 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871534 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 MS15048 nsv871534 1 12771679 12924515 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv149n71 nssv1540825 S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 MS15048 nssv1599772 1 12771679 12962685 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871206 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 IS41786 nsv871206 1 12771679 12962685 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv149n71 nssv1599772 S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF22,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 IS41786 nssv1569361 1 12771679 13388933 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871295 "" S 6533 1 0 HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 IS31563 nsv871295 1 12771679 13388933 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv147n71 nssv1569361 S 6533 1 0 HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 IS31563 nssv1501174 1 12773129 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871207 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP51104 nssv1501981 1 12773129 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871207 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP51062 nssv1506772 1 12773129 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871207 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP54405 nssv1515990 1 12773129 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871207 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP56350 nsv871207 1 12773129 12810136 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv152n71 nssv1501981,nssv1506772,nssv1501174,nssv1515990 M 6533 2 2 PRAMEF1,PRAMEF11 SP51062,SP51104,SP54405,SP56350 nssv1507508 1 12773129 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870703 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54626 nssv1507602 1 12773129 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870703 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54665 nssv1509125 1 12773129 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870703 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54753 nssv1514109 1 12773129 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870703 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP55937 nssv1515367 1 12773129 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870703 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56173 nsv870703 1 12773129 12841261 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv155n71 nssv1515367,nssv1507602,nssv1509125,nssv1507508,nssv1514109 M 6533 2 3 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54626,SP54665,SP54753,SP55937,SP56173 nssv1502762 1 12773129 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871414 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP51411 nssv1505133 1 12773129 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871414 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP53242 nssv1509496 1 12773129 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871414 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54803 nssv1515134 1 12773129 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871414 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56126 nsv871414 1 12773129 12845198 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv155n71 nssv1505133,nssv1515134,nssv1509496,nssv1502762 M 6533 1 3 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP51411,SP53242,SP54803,SP56126 nssv1514811 1 12773129 12861980 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870728 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 SP56084 nsv870728 1 12773129 12861980 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv158n71 nssv1514811 S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 SP56084 nssv1500652 1 12773129 12868842 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871956 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 SP50156 nssv11783 1 12773516 12779250 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8768 "" S 31 1 0 Samples from several populations that are part of the HapMap project. PRAMEF1 NA18972 nssv26891 1 12773516 12779250 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8768 "" S 31 1 0 Samples from several populations that are part of the HapMap project. PRAMEF1 NA18564 nssv28041 1 12773516 12780026 CNV Gain Perry et al 2008 18304495 Oligo_aCGH Agilent-015685 + 015686 Custom Human 244K CGH Microarray nsv8768 "" S 31 1 0 Samples from several populations that are part of the HapMap project. PRAMEF1 NA18552 essv76255 1 12773577 12938672 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15812 "" S 451 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA12414 essv47188 1 12773577 12940356 CNV Gain Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv15812 "" S 451 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 NA18861 nssv1501464 1 12775335 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870905 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP51108 nsv870905 1 12775335 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv153n71 nssv1501464 S 6533 1 0 PRAMEF1,PRAMEF11 SP51108 nssv1519192 1 12775335 12901641 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870786 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF7,PRAMEF8 SP80982 nsv870786 1 12775335 12901641 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv159n71 nssv1519192 S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF7,PRAMEF8 SP80982 nssv1507138 1 12775459 12793914 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870617 "" S 6533 0 1 PRAMEF1 SP54478 nssv1511760 1 12775459 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871280 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP55056 nsv871280 1 12775459 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv153n71 nssv1511760 S 6533 1 0 PRAMEF1,PRAMEF11 SP55056 nssv1511781 1 12775459 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871746 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP55077 nsv871746 1 12775459 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv151n71 nssv1511781 S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP55077 nssv1426371 1 12776279 12820751 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv828919 "" S 31 0 1 PRAMEF1,PRAMEF11 AK6 nsv828919 1 12776279 12820751 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv15n67 nssv1426371 S 31 0 1 PRAMEF1,PRAMEF11 AK6 essv101537 1 12776507 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21603 essv95060 1 12776507 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21721 essv97952 1 12776507 12856933 CNV Gain de_Smith_et_al_2007 17666407 Oligo_aCGH Agilent-015366 Custom Human 244K CGH Microarray esv32750 "" S 51 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 21837 nssv1558833 1 12777429 12793914 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871091 "" S 6533 1 0 PRAMEF1 MS23577 nssv1579438 1 12777429 12793914 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871091 "" S 6533 1 0 PRAMEF1 IS35100 nsv871091 1 12777429 12793914 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv160n71 nssv1558833,nssv1579438 M 6533 2 0 PRAMEF1 IS35100,MS23577 nssv1549348 1 12777429 12795459 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871358 "" S 6533 1 0 PRAMEF1 MS18195 nssv1562784 1 12777429 12795459 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871358 "" S 6533 1 0 PRAMEF1 MS25747 nsv871358 1 12777429 12795459 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv160n71 nssv1549348,nssv1562784 M 6533 2 0 PRAMEF1 MS18195,MS25747 nssv1502080 1 12777429 12800942 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870688 "" S 6533 0 1 PRAMEF1 SP51031 nssv1505111 1 12777429 12800942 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870688 "" S 6533 0 1 PRAMEF1 SP53060 nssv1521101 1 12777429 12800942 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870688 "" S 6533 0 1 PRAMEF1 SP52193 nssv1527114 1 12777429 12800942 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870688 "" S 6533 1 0 PRAMEF1 SP58166 nssv1585373 1 12777429 12800942 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870688 "" S 6533 1 0 PRAMEF1 IS37428 nssv1499272 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP50032 nssv1502745 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP51398 nssv1504303 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP52409 nssv1509649 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP54937 nssv1513741 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP55842 nssv1514784 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP56079 nssv1516760 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP56927 nssv1517867 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP57401 nssv1519847 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP50580 nssv1520703 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP51221 nssv1521013 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP51380 nssv1521054 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP51389 nssv1522275 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP52872 nssv1522415 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP53023 nssv1523087 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP53625 nssv1527120 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP58168 nssv1527682 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP80937 nssv1527814 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP81019 nssv1528092 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP81127 nssv1528472 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP81243 nssv1528580 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP81275 nssv1528673 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP81347 nssv1528796 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP81363 nssv1528884 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 SP81387 nssv1531761 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS10638 nssv1532799 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS10867 nssv1533302 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS11084 nssv1534991 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS11886 nssv1535114 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS12018 nssv1535181 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS12055 nssv1535484 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS12244 nssv1536092 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS12624 nssv1536343 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS12722 nssv1536441 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS12785 nssv1536975 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS13045 nssv1538356 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS13712 nssv1540704 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS14978 nssv1540909 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS15090 nssv1541810 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS15502 nssv1541890 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS15528 nssv1542024 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS15601 nssv1542225 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS15715 nssv1542249 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS15737 nssv1543977 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS16192 nssv1544743 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS16467 nssv1545477 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS16801 nssv1547659 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS17508 nssv1549239 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS18149 nssv1550565 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS18465 nssv1552099 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS19177 nssv1552349 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS19358 nssv1552581 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS19503 nssv1552615 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS19533 nssv1553266 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS19886 nssv1554405 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS20785 nssv1557746 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS22854 nssv1558318 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS23210 nssv1558787 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS23541 nssv1559414 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS23958 nssv1560170 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS24357 nssv1560276 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS24405 nssv1562255 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS25471 nssv1562860 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS25756 nssv1563062 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 MS25842 nssv1565978 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS30539 nssv1566320 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS30653 nssv1571046 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS32523 nssv1571374 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS32714 nssv1574092 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS33508 nssv1574846 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS33651 nssv1576159 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS33890 nssv1576373 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS34051 nssv1582183 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS35824 nssv1584164 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS36887 nssv1585121 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS37293 nssv1588026 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS38146 nssv1589167 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS38304 nssv1589659 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS38394 nssv1589849 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS38416 nssv1590260 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS38479 nssv1591005 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS38617 nssv1591088 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS38634 nssv1593885 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS39625 nssv1594559 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS39931 nssv1594735 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS40005 nssv1595495 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS40239 nssv1596443 1 12777429 12810136 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 0 1 PRAMEF1,PRAMEF11 IS40520 nssv1600720 1 12777429 12810136 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871196 "" S 6533 1 0 PRAMEF1,PRAMEF11 IS41920 nsv871196 1 12777429 12810136 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv152n71 nssv1533302,nssv1600720,nssv1521013,nssv1558318,nssv1527814,nssv1528673,nssv1502745,nssv1559414,nssv1562860,nssv1542225,nssv1535114,nssv1528472,nssv1522275,nssv1536441,nssv1554405,nssv1558787,nssv1588026,nssv1549239,nssv1499272,nssv1552581,nssv1536975,nssv1543977,nssv1589659,nssv1550565,nssv1557746,nssv1593885,nssv1596443,nssv1509649,nssv1590260,nssv1594735,nssv1536343,nssv1535181,nssv1589849,nssv1527682,nssv1571374,nssv1528092,nssv1562255,nssv1595495,nssv1542249,nssv1528796,nssv1552615,nssv1527120,nssv1576373,nssv1520703,nssv1545477,nssv1582183,nssv1566320,nssv1542024,nssv1523087,nssv1517867,nssv1513741,nssv1532799,nssv1560170,nssv1576159,nssv1574846,nssv1571046,nssv1535484,nssv1584164,nssv1528580,nssv1521054,nssv1540704,nssv1541890,nssv1574092,nssv1519847,nssv1541810,nssv1540909,nssv1522415,nssv1591005,nssv1531761,nssv1552099,nssv1591088,nssv1547659,nssv1544743,nssv1585121,nssv1565978,nssv1528884,nssv1563062,nssv1504303,nssv1553266,nssv1538356,nssv1594559,nssv1534991,nssv1536092,nssv1516760,nssv1552349,nssv1560276,nssv1589167,nssv1514784 M 6533 36 52 PRAMEF1,PRAMEF11 IS30539,IS30653,IS32523,IS32714,IS33508,IS33651,IS33890,IS34051,IS35824,IS36887,IS37293,IS38146,IS38304,IS38394,IS38416,IS38479,IS38617,IS38634,IS39625,IS39931,IS40005,IS40239,IS40520,IS41920,MS10638,MS10867,MS11084,MS11886,MS12018,MS12055,MS12244,MS12624,MS12722,MS12785,MS13045,MS13712,MS14978,MS15090,MS15502,MS15528,MS15601,MS15715,MS15737,MS16192,MS16467,MS16801,MS17508,MS18149,MS18465,MS19177,MS19358,MS19503,MS19533,MS19886,MS20785,MS22854,MS23210,MS23541,MS23958,MS24357,MS24405,MS25471,MS25756,MS25842,SP50032,SP50580,SP51221,SP51380,SP51389,SP51398,SP52409,SP52872,SP53023,SP53625,SP54937,SP55842,SP56079,SP56927,SP57401,SP58168,SP80937,SP81019,SP81127,SP81243,SP81275,SP81347,SP81363,SP81387 nssv1508796 1 12777429 12814937 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871281 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP54684 nsv871281 1 12777429 12814937 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv153n71 nssv1508796 S 6533 1 0 PRAMEF1,PRAMEF11 SP54684 nssv1524302 1 12777429 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870778 "" S 6533 1 0 PRAMEF1,PRAMEF11 SP54958 nssv1553368 1 12777429 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870778 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS19955 nssv1556669 1 12777429 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870778 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS22104 nssv1560839 1 12777429 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870778 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS24732 nssv1561197 1 12777429 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870778 "" S 6533 1 0 PRAMEF1,PRAMEF11 MS24873 nsv870778 1 12777429 12821018 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv154n71 nssv1560839,nssv1524302,nssv1556669,nssv1553368,nssv1561197 M 6533 5 0 PRAMEF1,PRAMEF11 MS19955,MS22104,MS24732,MS24873,SP54958 nssv1561329 1 12777429 12835088 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870956 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 MS24935 nsv870956 1 12777429 12835088 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv156n71 nssv1561329 S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 MS24935 nssv1502362 1 12777429 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871670 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP51082 nssv1513250 1 12777429 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv871670 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP55699 nssv1519596 1 12777429 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870924 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP50076 nssv1524284 1 12777429 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870924 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54952 nssv1529299 1 12777429 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870924 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP81501 nssv1533276 1 12777429 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870924 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS11078 nssv1535034 1 12777429 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870924 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS11980 nssv1542153 1 12777429 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870924 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS15682 nssv1580451 1 12777429 12841261 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870924 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35312 nssv1589902 1 12777429 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870924 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38430 nsv870924 1 12777429 12841261 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv155n71 nssv1529299,nssv1589902,nssv1542153,nssv1524284,nssv1535034,nssv1519596,nssv1533276,nssv1580451 M 6533 5 3 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35312,IS38430,MS11078,MS11980,MS15682,SP50076,SP54952,SP81501 nsv871670 1 12777429 12841261 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv151n71 nssv1502362,nssv1513250 M 6533 0 2 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP51082,SP55699 nssv1504441 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP52493 nssv1506939 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54442 nssv1507166 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54489 nssv1507738 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 1MduoV3 nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54636 nssv1520030 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP50653 nssv1524158 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP54885 nssv1524986 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP55423 nssv1525733 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56788 nssv1525885 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP56870 nssv1528166 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 SP81146 nssv1529997 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS10166 nssv1533411 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS11165 nssv1534391 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS11558 nssv1535155 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS12045 nssv1535241 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS12092 nssv1535393 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS12196 nssv1536723 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS12938 nssv1538270 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS13561 nssv1538331 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS13693 nssv1540457 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS14848 nssv1540690 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS14971 nssv1540963 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS15103 nssv1541053 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS15175 nssv1541830 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS15509 nssv1542605 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS15804 nssv1544871 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS16559 nssv1545306 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS16709 nssv1547443 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS17380 nssv1549288 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS18175 nssv1552364 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS19365 nssv1552438 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS19420 nssv1553254 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS19858 nssv1554189 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS20640 nssv1554693 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS20891 nssv1554989 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS21130 nssv1559248 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS23796 nssv1560000 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS24260 nssv1560934 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 MS24769 nssv1565557 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS30467 nssv1566582 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS30814 nssv1567529 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS31098 nssv1568805 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS31346 nssv1573348 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS33304 nssv1575316 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS33705 nssv1577724 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS34543 nssv1579088 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35018 nssv1580426 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35299 nssv1580493 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35342 nssv1580545 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS35378 nssv1582598 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS36049 nssv1588518 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38210 nssv1588924 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38267 nssv1589315 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38336 nssv1589547 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38380 nssv1590796 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS38589 nssv1595232 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS40188 nssv1595804 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS40333 nssv1595956 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS40373 nssv1596537 1 12777429 12845198 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS40557 nssv1598728 1 12777429 12845198 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870782 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS40940 nsv870782 1 12777429 12845198 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv155n71 nssv1542605,nssv1554693,nssv1538270,nssv1560934,nssv1535155,nssv1524986,nssv1554189,nssv1598728,nssv1552364,nssv1579088,nssv1553254,nssv1528166,nssv1507166,nssv1533411,nssv1507738,nssv1595804,nssv1535393,nssv1588924,nssv1565557,nssv1588518,nssv1540690,nssv1547443,nssv1582598,nssv1545306,nssv1535241,nssv1524158,nssv1554989,nssv1573348,nssv1525733,nssv1552438,nssv1504441,nssv1534391,nssv1541053,nssv1506939,nssv1575316,nssv1580545,nssv1520030,nssv1580426,nssv1544871,nssv1590796,nssv1541830,nssv1595232,nssv1536723,nssv1589547,nssv1538331,nssv1549288,nssv1567529,nssv1525885,nssv1568805,nssv1560000,nssv1595956,nssv1580493,nssv1566582,nssv1540963,nssv1589315,nssv1596537,nssv1540457,nssv1529997,nssv1559248,nssv1577724 M 6533 21 39 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 IS30467,IS30814,IS31098,IS31346,IS33304,IS33705,IS34543,IS35018,IS35299,IS35342,IS35378,IS36049,IS38210,IS38267,IS38336,IS38380,IS38589,IS40188,IS40333,IS40373,IS40557,IS40940,MS10166,MS11165,MS11558,MS12045,MS12092,MS12196,MS12938,MS13561,MS13693,MS14848,MS14971,MS15103,MS15175,MS15509,MS15804,MS16559,MS16709,MS17380,MS18175,MS19365,MS19420,MS19858,MS20640,MS20891,MS21130,MS23796,MS24260,MS24769,SP50653,SP52493,SP54442,SP54489,SP54636,SP54885,SP55423,SP56788,SP56870,SP81146 nssv1548287 1 12777429 12861980 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871283 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 MS17788 nssv1559013 1 12777429 12861980 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871283 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 MS23670 nssv1576533 1 12777429 12861980 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871283 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 IS34108 nssv1595170 1 12777429 12861980 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871283 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 IS40145 nsv871283 1 12777429 12861980 CNV Gain+Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv157n71 nssv1595170,nssv1576533,nssv1548287,nssv1559013 M 6533 3 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2,PRAMEF4 IS34108,IS40145,MS17788,MS23670 nssv1588365 1 12777429 12934044 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv871390 "" S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 IS38184 nsv871390 1 12777429 12934044 CNV Loss Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv159n71 nssv1588365 S 6533 0 1 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 IS38184 nssv1585047 1 12777429 12942407 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870895 "" S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 IS37226 nsv870895 1 12777429 12942407 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv149n71 nssv1585047 S 6533 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF2,PRAMEF4,PRAMEF6,PRAMEF7,PRAMEF8 IS37226 nssv1546257 1 12777429 13388933 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad nsv870983 "" S 6533 1 0 HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 MS17114 nsv870983 1 12777429 13388933 CNV Gain Xu_et_al_2011 21882294 SNP_array Illumina HumanHap 610 Quad + Illumina HumanHap 1MduoV3 dgv147n71 nssv1546257 S 6533 1 0 HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 MS17114 essv6560 1 12778733 12834016 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv25e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 NA18624 essv2359 1 12778733 12835226 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv25e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11 NA18995 essv1569 1 12778733 12846549 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv25e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 NA18997 essv5619 1 12778733 12846549 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv25e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 NA18593 essv9557 1 12778733 12846549 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv25e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 NA18861 essv973 1 12778733 12846549 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv25e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 NA18981 essv17868 1 12778733 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA10857 essv19111 1 12778733 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12044 essv21630 1 12778733 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA07348 essv23267 1 12778733 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA07345 essv2428 1 12778733 13647613 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18951 essv18517 1 12778733 13665979 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12763 essv18896 1 12778733 13665979 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12717 essv21902 1 12778733 13665979 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA10838 essv938 1 12778733 13668036 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18949 essv21921 1 12778733 13670298 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA12057 essv4342 1 12778733 13670620 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv22e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC440563,LOC649330,PRAMEF1,PRAMEF10,PRAMEF11,PRAMEF13,PRAMEF14,PRAMEF15,PRAMEF16,PRAMEF17,PRAMEF18,PRAMEF19,PRAMEF2,PRAMEF20,PRAMEF21,PRAMEF22,PRAMEF3,PRAMEF4,PRAMEF5,PRAMEF6,PRAMEF7,PRAMEF8,PRAMEF9 NA18622 nssv1421443 1 12779046 12842627 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv829030 "" S 31 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 NA18997 nsv829030 1 12779046 12842627 CNV Gain Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv14n67 nssv1421443 S 31 1 0 HNRNPCL1,LOC649330,PRAMEF1,PRAMEF11,PRAMEF2 NA18997 nssv1437927 1 12779805 12820751 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH nsv829141 "" S 31 0 1 Samples from several populations that are part of the HapMap project. PRAMEF11 NA18951 nsv829141 1 12779805 12820751 CNV Loss Park_et_al_2010 20364138 Oligo_aCGH Agilent 24M aCGH dgv15n67 nssv1437927 S 31 0 1 PRAMEF11 NA18951 essv1080 1 12780640 12835226 CNV CNV Redon et al 2006 17122850 BAC_aCGH,MassSpec,PCR,qPCR,SNP_array Affymetrix GeneChip Mapping 500K Early Access Array (250K_Sty_SNP + 250K_Nsp_SNP) dgv25e1 "" S 271 0 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF11 NA18990 essv69023 1 12782328 12820033 CNV Loss Conrad et al 2009 19812545 Composite_approach,Oligo_aCGH Sanger H. Sapiens NimbleGen 42M CGH Array esv16950 "" S 451 0 1 Samples from several populations that are part of the HapMap project. PRAMEF11 NA12044 nssv468518 1 12783336 12790824 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv438192 "" S 269 0 1 Samples from several populations that are part of the HapMap project. "" NA19101 nssv468629 1 12783336 12790824 CNV Loss McCarroll et al 2006 16468122 SNP_genotyping_analysis Not Provided nsv438192 "" S 269 0 1 Samples from several populations that are part of the HapMap project. "" NA19103 nssv676529 1 12783336 12802740 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 "" nssv680870 1 12783336 12802740 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 1 0 "" nssv688922 1 12783336 12802740 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 "" nssv542527 1 12783336 12802943 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467171 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00702 nssv542620 1 12783336 12802943 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467283 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00999 nssv542701 1 12783336 12802943 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467394 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP01254 nssv542781 1 12783336 12802943 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467505 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP01269 nsv467171 1 12783336 12802943 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv7n27 nssv542527 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00702 nsv467283 1 12783336 12802943 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv7n27 nssv542620 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP00999 nsv467394 1 12783336 12802943 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv7n27 nssv542701 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP01254 nsv467505 1 12783336 12802943 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv7n27 nssv542781 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations "" HGDP01269 nssv542843 1 12783336 12833787 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467616 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00791 nssv542931 1 12783336 12833787 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467727 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01296 nsv467616 1 12783336 12833787 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv542843 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00791 nsv467727 1 12783336 12833787 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv542931 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01296 nssv542992 1 12783336 12834675 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467838 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00262 nssv543085 1 12783336 12834675 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv467949 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780862294_A nssv685626 1 12783336 12834675 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv688036 1 12783336 12834675 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv691789 1 12783336 12834675 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nsv467838 1 12783336 12834675 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv9n27 nssv542992 S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00262 nsv467949 1 12783336 12834675 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv9n27 nssv543085 S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780862294_A nssv547699 1 12783336 12836482 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470695 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01366 nssv547702 1 12783336 12836482 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470695 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00694 nssv547703 1 12783336 12836482 CNV Loss Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470695 "" S 443 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00988 nssv547704 1 12783336 12836482 CNV Gain Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470696 "" S 443 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00072 nssv547705 1 12783336 12836482 CNV Gain Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470696 "" S 443 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00714 nssv547706 1 12783336 12836482 CNV Gain Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470696 "" S 443 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00560 nssv547707 1 12783336 12836482 CNV Gain Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470696 "" S 443 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00572 nssv547708 1 12783336 12836482 CNV Gain Jakobsson et al 2008 18288195 SNP_genotyping_analysis Illumina HumanHap550 Genotyping BeadChip v1 + v3 nsv470696 "" S 443 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01317 nssv1417095 1 12783336 12836483 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv817728 "" S 112 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF11 NA18529 nssv1417408 1 12783336 12836483 CNV Loss Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv817728 "" S 112 0 1 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF11 NA18951 nssv1418244 1 12783336 12836483 CNV Gain Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv817728 "" S 112 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF11 NA19092 nssv1418245 1 12783336 12836483 CNV Gain Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv817728 "" S 112 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF11 NA19094 nssv1418336 1 12783336 12836483 CNV Gain Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv817728 "" S 112 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF11 NA12239 nssv1418338 1 12783336 12836483 CNV Gain Wang_et_al_2007 17921354 SNP_array Illumina HumanHap550 Bead Chip nsv817728 "" S 112 1 0 Samples from several populations that are part of the HapMap project. HNRNPCL1,LOC649330,PRAMEF11 NA10847 nssv533181 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv455663 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01399 nssv533258 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv455774 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00106 nssv533344 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv455885 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00251 nssv533431 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv455996 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00267 nssv533511 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456107 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00279 nssv533583 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456218 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00285 nssv533670 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456329 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00351 nssv533759 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456440 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00748 nssv533858 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456551 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00780 nssv533957 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456662 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00781 nssv534058 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456774 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00813 nssv534164 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456885 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00896 nssv534275 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv456996 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00964 nssv534373 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457107 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01033 nssv534453 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457218 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01191 nssv534538 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457329 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01321 nssv534631 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457440 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01330 nssv534715 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457551 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01360 nssv534798 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457662 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01361 nssv534895 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457773 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01363 nssv534984 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457885 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01369 nssv535073 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv457996 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01375 nssv535141 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458107 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_117 nssv535205 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458218 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 NINDS_208 nssv535279 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458329 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_27 nssv535374 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458440 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_50 nssv535467 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458551 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_109 nssv535574 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458662 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_134 nssv535675 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458773 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_182 nssv535746 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458884 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_198 nssv535844 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv458996 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_219 nssv535932 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459107 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_240 nssv536027 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459218 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_253 nssv536099 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459329 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_258 nssv536177 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459440 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_266 nssv536284 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459551 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_70 nssv536393 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459662 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 NINDS_83 nssv536491 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459773 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780846321_A nssv536545 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459884 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780854128_A nssv536586 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459939 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780854260_A nssv536593 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459951 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780854261_A nssv536604 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459962 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780854362_A nssv536613 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459973 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780862085_A nssv536622 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459984 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1782681216_A nssv536633 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv459995 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1798860565_A nssv536639 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460006 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780854095_A nssv536645 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460017 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780854341_A nssv536655 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460028 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780854384_A nssv536666 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460039 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780862015_A nssv536677 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460050 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780862229_A nssv536687 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460062 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780862250_A nssv536698 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460073 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780862263_A nssv536707 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460084 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780862346_A nssv536715 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460095 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780862390_A nssv536723 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460106 "" S 1557 1 0 HNRNPCL1,LOC649330,PRAMEF11 1780862487_A nssv536732 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460117 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1780862574_A nssv536740 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460128 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1782681236_A nssv536748 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460139 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1782681287_A nssv536757 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv460150 "" S 1557 0 1 HNRNPCL1,LOC649330,PRAMEF11 1798860277_A nssv543194 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468060 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00072 nssv543302 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468171 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00560 nssv543408 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468282 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00572 nssv543513 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468394 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00714 nssv543624 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468505 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00751 nssv543719 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468616 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00856 nssv543818 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468727 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00945 nssv543909 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468838 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00950 nssv543981 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv468949 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01103 nssv544070 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv469060 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01251 nssv544133 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv469171 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01306 nssv544216 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv469282 "" S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01317 nssv544269 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided nsv469393 "" S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01372 nssv653971 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv654351 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv655162 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv658040 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv658218 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv658961 1 12783336 12836483 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 1 0 HNRNPCL1,LOC649330,PRAMEF11 nssv659030 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv659765 1 12783336 12836483 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 1 0 HNRNPCL1,LOC649330,PRAMEF11 nssv660725 1 12783336 12836483 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 1 0 HNRNPCL1,LOC649330,PRAMEF11 nssv661007 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv662505 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv662916 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv663203 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv664702 1 12783336 12836483 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 1 0 HNRNPCL1,LOC649330,PRAMEF11 nssv669316 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv670769 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv671841 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv674765 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv675204 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv675328 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv676136 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv676168 1 12783336 12836483 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 1 0 HNRNPCL1,LOC649330,PRAMEF11 nssv678613 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv680385 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv680570 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv683316 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv683850 1 12783336 12836483 CNV Gain Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 1 0 HNRNPCL1,LOC649330,PRAMEF11 nssv684041 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv685508 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv687277 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv688182 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nssv692526 1 12783336 12836483 CNV Loss Shaikh et al 2009 19592680 SNP_array Illumina HumanHap550 Genotyping BeadChip v3 nsv517190 "" S 2026 0 1 HNRNPCL1,LOC649330,PRAMEF11 nsv455663 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv9n27 nssv533181 S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01399 nsv455774 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533258 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00106 nsv455885 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533344 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00251 nsv455996 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533431 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00267 nsv456107 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533511 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00279 nsv456218 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533583 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00285 nsv456329 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533670 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00351 nsv456440 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533759 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00748 nsv456551 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533858 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00780 nsv456662 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv533957 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00781 nsv456774 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534058 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00813 nsv456885 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534164 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00896 nsv456996 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534275 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP00964 nsv457107 1 12783336 12836483 CNV Gain Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv9n27 nssv534373 S 1557 1 0 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01033 nsv457218 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534453 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01191 nsv457329 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534538 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01321 nsv457440 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534631 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01330 nsv457551 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534715 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01360 nsv457662 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534798 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01361 nsv457773 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534895 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC649330,PRAMEF11 HGDP01363 nsv457885 1 12783336 12836483 CNV Loss Itsara et al 2009 19166990 BAC_aCGH,SNP_genotyping_analysis Not Provided dgv8n27 nssv534984 S 1557 0 1 A resource of 1064 cultured lymphoblastoid cell lines from 1050 individuals in 51 world populations HNRNPCL1,LOC6