A curated catalogue of human genomic structural variation


Browser Select Tracks Custom Tracks Preferences
- Search
Landmark or Region:
Examples: chr7:71890181..72690180, CFTR, AC108171.3, nsv529033.
  
Data Source
Scroll/Zoom:        


 Filter variants

The following 63 regions match your request.

 
 
 
 
 
 
 
chr1
 
 
 
 
chr2
 
 
 
 
 
 
 
 
 
chr3
 
 
chr4
 
 
chr5
 
 
 
 
 
 
 
 
 
 
 
 
chr6
 
chr7
 
 
 
chr8
 
 
 
 
chr9
 
 
chr11
 
chr12
 
 
chr14
 
 
 
 
chr16
 
 
 
chr17
 
chr18
 
 
 
chr19
 
chr22
 
chr21
 
chrX

Name Type Description Position Match Score
TRAPPC3|NM_001270894 transcript chr1:36602170..36615115 n/a
TRAPPC3|NM_001270895 transcript chr1:36602170..36621654 n/a
TRABD2B|NM_001194986 transcript chr1:48226200..48462562 n/a
TRAF3IP3|NM_025228 transcript chr1:209929394..209955668 n/a
TRAF5|NM_004619 transcript chr1:211499957..211548286 n/a
TRAF5|NM_001033910 transcript chr1:211500148..211548286 n/a
TRAF5|NM_145759 transcript chr1:211519706..211548286 n/a
TRAPPC12|NM_016030 transcript chr2:3383446..3483342 n/a
TRABD2A|NM_001080824 transcript chr2:85048791..85108369 n/a
TRAK2|NM_015049 transcript chr2:202241930..202316319 n/a
TRAF3IP1|NM_001139490 transcript chr2:239229185..239309541 n/a
TRANK1|NM_014831 transcript chr3:36868308..36986548 n/a
TRAK1|NM_001265608 transcript chr3:42132746..42254118 n/a
TRAK1|NM_001042646 transcript chr3:42132746..42267382 n/a
TRAK1|NM_001265610 transcript chr3:42190727..42245681 n/a
TRAK1|NM_001265609 transcript chr3:42190727..42254118 n/a
TRAK1|NM_014965 transcript chr3:42201661..42254118 n/a
TRAIP|NM_005879 transcript chr3:49866028..49893992 n/a
TRAT1|NM_016388 transcript chr3:108541631..108573714 n/a
TRA2B|NM_001243879 transcript chr3:185632358..185655924 n/a
TRAM1L1|NM_152402 transcript chr4:118004710..118006736 n/a
TRAPPC11|NM_021942 transcript chr4:184580420..184634747 n/a
TRAPPC13|NR_003545 transcript chr5:64920558..64926532 n/a
TRAPPC13|NM_001093755 transcript chr5:64920558..64961954 n/a
TRAM2|NM_012288 transcript chr6:52362200..52441862 n/a
TRAM2-AS1|NR_103446 transcript chr6:52442000..52448791 n/a
TRAM2-AS1|NR_103447 transcript chr6:52442096..52448791 n/a
TRAF3IP2-AS1|NR_034111 transcript chr6:111804675..111824811 n/a
TRAF3IP2-AS1|NR_034110 transcript chr6:111804675..111899383 n/a
TRAF3IP2-AS1|NR_034108 transcript chr6:111804675..111923497 n/a
TRAF3IP2|NM_001164283 transcript chr6:111876581..111888563 n/a
TRAF3IP2|NM_001164281 transcript chr6:111876581..111927477 n/a
TRAF3IP2|NM_001164283 transcript chr6:111880143..111888521 n/a
TRAF3IP2|NM_001164282 transcript chr6:111880143..111894898 n/a
TRAF3IP2|NM_001164281 transcript chr6:111880143..111927474 n/a
TRAPPC3L|NM_001139444 transcript chr6:116817651..116866773 n/a
TRA2A|NM_001282757 transcript chr7:23544401..23571660 n/a
TRAM1|NM_014294 transcript chr8:71485453..71520694 n/a
TRAPPC9|NM_001160372 transcript chr8:140742586..141467861 n/a
TRAPPC9|NM_031466 transcript chr8:140742586..141468678 n/a
TRAF1|NM_001190947 transcript chr9:123664671..123676850 n/a
TRAF1|NM_005658 transcript chr9:123664671..123689173 n/a
TRAF1|NM_001190945 transcript chr9:123664671..123691451 n/a
TRAF2|NM_021138 transcript chr9:139780965..139821067 n/a
TRAF6|NM_004620 transcript chr11:36505317..36531863 n/a
TRAPPC4|NM_016146 transcript chr11:118889241..118894385 n/a
TRAFD1|NM_001143906 transcript chr12:112563349..112591408 n/a
TRAPPC6B|NM_001079537 transcript chr14:39617015..39639634 n/a
TRAF3|NM_001199427 transcript chr14:103243816..103377837 n/a
TRAF7|NM_032271 transcript chr16:2205799..2228130 n/a
TRAP1|NM_001272049 transcript chr16:3708038..3767598 n/a
TRADD|NM_003789 transcript chr16:67188089..67193812 n/a
TRAPPC2L|NM_016209 transcript chr16:88923506..88927520 n/a
TRAPPC1|NM_021210 transcript chr17:7833663..7835267 n/a
TRAPPC1|NM_001166621 transcript chr17:7833663..7835317 n/a
TRAF4|NM_004295 transcript chr17:27071023..27077976 n/a
TRAPPC8|NM_014939 transcript chr18:29409136..29523091 n/a
TRAPPC5|NM_001042461 transcript chr19:7745707..7747748 n/a
TRAPPC6A|NM_001270891 transcript chr19:45666186..45681501 n/a
TRAPPC2P1|NR_002166 transcript chr19:57874879..57876721 n/a
TRABD|NM_025204 transcript chr22:50624360..50638027 n/a
TRAPPC10|NM_003274 transcript chr21:45432206..45526432 n/a
TRAPPC2|NM_001011658 transcript chrX:13730361..13752754 n/a
<< Back to Browser Show Favorites Only Clear All Favorites
- Tracks
- Breakpoints
   
Breakpoint annotations from Lam et al (Blue:Gain;Red:Loss;Indigo:Inversion;Brown:Complex) [?] Annotations from Conrad et al [?] Breakpoint annotations from Pang 2012 (Blue:Gain;Red:Loss;Indigo:Inversion;Brown:Complex) [?]
- CGH Arrays
   
Agilent 244k [?] Clones on SMRT BAC Array [?] 
- CN Assays
   
Life Technologies TaqMan Copy Number Assays [?]  
- Chromosome
   
Cytogenetic Bands [?] Assembly [?] Gap [?]
- Clones
   
BAC End Pairs [?] Fosmid End Pairs [?] 
- Disease
   
ISCA Curated clinically relevant regions [?] Disease Genes (OMIM) [?] DECIPHER: Chromosomal Imbalance and Phenotype in Humans (Blue:Gain;Red:Loss;Brown:Complex;Black:NA) [?]
ISCA Clinical cytogenetic testing (Blue:Gain;Red:Loss;Brown:Complex;Black:NA) [?] DECIPHER Genomic Disorders [?] 
- Gene
   
RefSeq Genes [?] mRNA [?] microRNA [?]
- General
   
Personal Genome Variants (Blue:Gain;Red:Loss;Brown:Complex;Purple:Inversion;Black:Unknown) [?] SNPs [?] 
dbRIP [?] RepeatMasker [?] 
- SNP Arrays
   
AFFY SNP Array 5.0 [?] ILMN HumanHap 300 [?] ILMN HumanHap 650Y [?]
AFFY SNP Array 6.0 [?] ILMN HumanHap 550 [?] ILMN Human 660W [?]
AFFY CytoScan HD [?] ILMN Human 610 Quad [?] ILMN HumanHap 1M [?]
- Segmental Duplications
   
UCSC segmental duplications [?]  
- Study Variants
   
DGV Structural Variants (Blue:Gain;Red:Loss;Brown:Complex;Purple:Inversion;Black:Unknown) [?] Unannotated Studies (Blue:Gain;Red:Loss;Brown:Complex;Purple:Inversion;Black:Unknown) [?] DGV Gold Standard Variants (blue=Gain; red=Loss; brown=Gain+Loss) [?]
Supporting Variants (Blue:Gain;Red:Loss;Brown:Complex;Purple:Inverison;Black:Unknown) [?] Nat. Rev. Gen. CNV Map - Inclusive (blue=Gain; red=Loss; brown=Gain+Loss) [?] OPGP Affymetrix CytoHD Variants (blue=Gain; red=Loss; solidbox=AFFY_FILTER; solidline=MULTI_ALGO; dashedline=ONLY_CHAS) [?]
DGV Version 1 Structural Variants (Blue:Gain;Red:Loss;Brown:Complex;Purple:Inversion;Black:Unknown) [?] Nat. Rev. Gen. CNV Map - Stringent (blue=Gain; red=Loss; brown=Gain+Loss) [?] 
- Overview
   
Chromosome (overview)   

Custom Tracks

[Help with uploading custom tracks]

There are no tracks yet.

Add custom tracks : [From text] [From a URL] [From a file]

Image Width
Highlight feature(s) (feature1 feature2...)
Clear highlighting
  Highlight regions (region1:start..end region2:start..end)
Clear highlighting
  Region Size (bp)

For questions about the data at this site, please contact us